IVF0002085 (gene) Melon (IVF77) v1

Overview


Name	IVF0002085
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	TLC domain-containing protein
Location	chr10: 3783173 .. 3784141 (-)
RNA-Seq Expression	IVF0002085
Synteny	IVF0002085

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCCACCAAAGACATCTATTCCTTATCTAATCTTCACCAATCAAACACAATTTAAAAATTCAACTCAAACACAAATATAAATACATAATCAACATAATTAACCGTGCACGATACTTAAAATCAAATCCCCAATCAACAACTTCATTATAAACCCTAAATCCAATCATACCTCAATACGTAATAAGAAACCCAACAAATTTTGGCATTAATCTCATCATCAATGGACCTTCAATTACCACTATTCTTCTCCATGTTTCTATTCGTATACACCTTCGCTTACTCGGTTCTCCTTCGAAATTGGGGGCCAAAGCACAGATTAGAAGCTTCAAGTTGCTTCATATCCCTCGCCCATGGCACTCCCGTCGTAATCCTCGCCACAATCGCAATTCTCCAATCTCCAAATCCAACCGATTTCGCCGCTCCAAACACCAAATTCCAAGCCCTAGTTCTCGAATACAGCATAGCGTATTTCTCACTAGATCTTCTTCATTGCGTATCGTTTTCTCCAAATGATTTCGTCTTCATATTTCATCATCTAGCAGTGCTTTACGTCTTCGTTACATGTAATTACATTGTTGGTTGTGGGGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTAAGCAGTGGGTGCCAAAATGCTTGGACCCTTGCGGGGTATAGAAGGACGGAAATTGTAGCCGCGGCTAAGTTTGAGGAGTTTGTGACTCCGTATTTCTTAACGTTTTATAGTGTTTTACGAGTGGGATTGGCGCCGGTGGTTGTGTGCAAAATGGGGGAGTTTTATGTTGGCAGTTTGGTAATGAGTGGGAATTTGATTCCTACGTGGGCTTGGATTTCTTGGCTTTGTGTCATTGGTATGGCTATTTTTGGTAGTGTTTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCCCCACTCAGAATAGAAAAGAAAAAGTAAGTTCATATGTATCTCACTAA

mRNA sequence

CTTCCCACCAAAGACATCTATTCCTTATCTAATCTTCACCAATCAAACACAATTTAAAAATTCAACTCAAACACAAATATAAATACATAATCAACATAATTAACCGTGCACGATACTTAAAATCAAATCCCCAATCAACAACTTCATTATAAACCCTAAATCCAATCATACCTCAATACGTAATAAGAAACCCAACAAATTTTGGCATTAATCTCATCATCAATGGACCTTCAATTACCACTATTCTTCTCCATGTTTCTATTCGTATACACCTTCGCTTACTCGGTTCTCCTTCGAAATTGGGGGCCAAAGCACAGATTAGAAGCTTCAAGTTGCTTCATATCCCTCGCCCATGGCACTCCCGTCGTAATCCTCGCCACAATCGCAATTCTCCAATCTCCAAATCCAACCGATTTCGCCGCTCCAAACACCAAATTCCAAGCCCTAGTTCTCGAATACAGCATAGCGTATTTCTCACTAGATCTTCTTCATTGCGTATCGTTTTCTCCAAATGATTTCGTCTTCATATTTCATCATCTAGCAGTGCTTTACGTCTTCGTTACATGTAATTACATTGTTGGTTGTGGGGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTAAGCAGTGGGTGCCAAAATGCTTGGACCCTTGCGGGGTATAGAAGGACGGAAATTGTAGCCGCGGCTAAGTTTGAGGAGTTTGTGACTCCGTATTTCTTAACGTTTTATAGTGTTTTACGAGTGGGATTGGCGCCGGTGGTTGTGTGCAAAATGGGGGAGTTTTATGTTGGCAGTTTGGTAATGAGTGGGAATTTGATTCCTACGTGGGCTTGGATTTCTTGGCTTTGTGTCATTGGTATGGCTATTTTTGGTAGTGTTTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCCCCACTCAGAATAGAAAAGAAAAAGTAAGTTCATATGTATCTCACTAA

Coding sequence (CDS)

ATGGACCTTCAATTACCACTATTCTTCTCCATGTTTCTATTCGTATACACCTTCGCTTACTCGGTTCTCCTTCGAAATTGGGGGCCAAAGCACAGATTAGAAGCTTCAAGTTGCTTCATATCCCTCGCCCATGGCACTCCCGTCGTAATCCTCGCCACAATCGCAATTCTCCAATCTCCAAATCCAACCGATTTCGCCGCTCCAAACACCAAATTCCAAGCCCTAGTTCTCGAATACAGCATAGCGTATTTCTCACTAGATCTTCTTCATTGCGTATCGTTTTCTCCAAATGATTTCGTCTTCATATTTCATCATCTAGCAGTGCTTTACGTCTTCGTTACATGTAATTACATTGTTGGTTGTGGGGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTAAGCAGTGGGTGCCAAAATGCTTGGACCCTTGCGGGGTATAGAAGGACGGAAATTGTAGCCGCGGCTAAGTTTGAGGAGTTTGTGACTCCGTATTTCTTAACGTTTTATAGTGTTTTACGAGTGGGATTGGCGCCGGTGGTTGTGTGCAAAATGGGGGAGTTTTATGTTGGCAGTTTGGTAATGAGTGGGAATTTGATTCCTACGTGGGCTTGGATTTCTTGGCTTTGTGTCATTGGTATGGCTATTTTTGGTAGTGTTTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCCCCACTCAGAATAGAAAAGAAAAAGTAAGTTCATATGTATCTCACTAA

Protein sequence

MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEKVSSYVSH

Homology

[Close]

BLAST of IVF0002085 vs. ExPASy Swiss-Prot
Match: Q8GYK7 (TLC domain-containing protein At5g14285 OS=Arabidopsis thaliana OX=3702 GN=At5g14285 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.7e-55
Identity = 115/244 (47.13%), Postives = 157/244 (64.34%), Query Frame = 0


Query: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64
           LP+FFSMFL +Y  AY ++ RNW P+ R EASSC IS+ HG+P V LAT A+  S +   
Sbjct: 13  LPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFSS-SERS 72

Query: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 124
           FA+ NT  Q  VL++S+AYF  DL H + F+PND +FI HH+A L+VF+TC ++V  GA 
Sbjct: 73  FASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLVFHGAC 132

Query: 125 PILGLLVVAELSSGCQNAWTLAGYRRT--EIVAAAKFEEFVTPYFLTFYSVLRVGLAPVV 184
            ILGLL++AE++S CQNAWTLAG R+   E   A K  + ++P F  FYS++R  L P+ 
Sbjct: 133 AILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVLGPLF 192

Query: 185 VCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEKV 244
             KM  FY      +  +IP W WISW  V+G+AI  S+LW+ N W+  F   +  K +V
Sbjct: 193 FGKMVAFYARG--GAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKANKIRV 252

Query: 245 SSYV 247
              +
Sbjct: 253 DKKI 253

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BLAST of IVF0002085 vs. ExPASy TrEMBL
Match: A0A5A7SSM3 (TLC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002050 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 6.9e-139
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60
           MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP
Sbjct: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60

Query: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120
           NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG
Sbjct: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180
           CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180

Query: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE 240
           VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE
Sbjct: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE 240

Query: 241 KVSSYVSH 249
           KVSSYVSH
Sbjct: 241 KVSSYVSH 248

[Close]

BLAST of IVF0002085 vs. ExPASy TrEMBL
Match: A0A1S3BDR4 (uncharacterized protein LOC103488912 OS=Cucumis melo OX=3656 GN=LOC103488912 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 6.9e-139
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60
           MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP
Sbjct: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60

Query: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120
           NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG
Sbjct: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180
           CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180

Query: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE 240
           VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE
Sbjct: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE 240

Query: 241 KVSSYVSH 249
           KVSSYVSH
Sbjct: 241 KVSSYVSH 248

[Close]

BLAST of IVF0002085 vs. ExPASy TrEMBL
Match: A0A0A0KVB7 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G590130 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124
Identity = 224/239 (93.72%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60
           MDLQLPLFF+MFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILA IAILQSP
Sbjct: 1   MDLQLPLFFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSP 60

Query: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120
           N TDFAAPNTKFQALVLEYSIAYFSLDLLHC+ FSPNDFVFIFHHLAVLYVFVTCNYIVG
Sbjct: 61  NSTDFAAPNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180
           CGAVPILGLLVVAELSSGCQNAWTLAGYRRTE+VAAAKFEEFV PYFLTFYSVLRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAP 180

Query: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 240
           VVVCKMGEFYVGSL MSGNLIPTWAWISW+CVIG+AIFGSVLWVGNHWLLWF    N K
Sbjct: 181 VVVCKMGEFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTK 239

[Close]

BLAST of IVF0002085 vs. ExPASy TrEMBL
Match: A0A6J1GXG9 (TLC domain-containing protein At5g14285-like OS=Cucurbita moschata OX=3662 GN=LOC111458300 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 5.9e-90
Identity = 168/232 (72.41%), Postives = 193/232 (83.19%), Query Frame = 0


Query: 8   FFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTDFAA 67
           FF MFLFVY FAY V+L+NWGPKHRLEASSCFISLAHG PVVI+A IAILQ+PN  DFAA
Sbjct: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMADFAA 77

Query: 68  PNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAVPIL 127
            NTK+Q LVLEYS+AYF +DLLH + F P DFVFI HHLAVLYVF TC+Y+V  GA+PIL
Sbjct: 78  LNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCHYLVSRGALPIL 137

Query: 128 GLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVCKMG 187
            LLV+AE SSGCQN WTLAGYRR ++ AAAKF++FV+PYF TFYS+LR G APV + KMG
Sbjct: 138 VLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMG 197

Query: 188 EFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 240
           EFYV S   + NLIP WAWISW+ VIG AIF S+LWVGNHW+LWFR T++ K
Sbjct: 198 EFYVSS--AAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFRRTKHGK 247

[Close]

BLAST of IVF0002085 vs. ExPASy TrEMBL
Match: A0A6J1KCU9 (TLC domain-containing protein At5g14285-like OS=Cucurbita maxima OX=3661 GN=LOC111493150 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 4.2e-88
Identity = 165/232 (71.12%), Postives = 191/232 (82.33%), Query Frame = 0


Query: 8   FFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTDFAA 67
           FF MFLFVY FAY V+L+NWGPKHRLEASSCFISLAHG+PVVI+A IAILQ+PN  DFAA
Sbjct: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNMADFAA 77

Query: 68  PNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAVPIL 127
            NTK+Q LVL+YS+AYF +DLLH + F P DFVFI HHLAVLYVF TCNY+V  GA+PIL
Sbjct: 78  LNTKYQGLVLQYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCNYLVRRGALPIL 137

Query: 128 GLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVCKMG 187
            LLV+AE SSGCQN WTLAGYRR ++ AAAKF++FV+PYF TFYS+LR G APV + KMG
Sbjct: 138 VLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMG 197

Query: 188 EFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 240
           EFYV     + NLIP WAWISW+ VIG AI  S+LWVGNHW+LWFR  ++ K
Sbjct: 198 EFYVSR--AAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRCKKHGK 247

[Close]

BLAST of IVF0002085 vs. NCBI nr
Match: XP_008446083.1 (PREDICTED: uncharacterized protein LOC103488912 [Cucumis melo] >KAA0034214.1 TLC domain-containing protein [Cucumis melo var. makuwa] >TYK15706.1 TLC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 504 bits (1298), Expect = 3.52e-180
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60
           MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP
Sbjct: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60

Query: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120
           NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG
Sbjct: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180
           CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180

Query: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE 240
           VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE
Sbjct: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE 240

Query: 241 KVSSYVSH 248
           KVSSYVSH
Sbjct: 241 KVSSYVSH 248

[Close]

BLAST of IVF0002085 vs. NCBI nr
Match: XP_004135513.1 (TLC domain-containing protein At5g14285 [Cucumis sativus] >KGN51696.1 hypothetical protein Csa_007746 [Cucumis sativus])

HSP 1 Score: 456 bits (1174), Expect = 2.11e-161
Identity = 224/239 (93.72%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60
           MDLQLPLFF+MFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILA IAILQSP
Sbjct: 1   MDLQLPLFFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSP 60

Query: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120
           N TDFAAPNTKFQALVLEYSIAYFSLDLLHC+ FSPNDFVFIFHHLAVLYVFVTCNYIVG
Sbjct: 61  NSTDFAAPNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180
           CGAVPILGLLVVAELSSGCQNAWTLAGYRRTE+VAAAKFEEFV PYFLTFYSVLRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAP 180

Query: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 239
           VVVCKMGEFYVGSL MSGNLIPTWAWISW+CVIG+AIFGSVLWVGNHWLLWF    N K
Sbjct: 181 VVVCKMGEFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTK 239

[Close]

BLAST of IVF0002085 vs. NCBI nr
Match: XP_038892912.1 (TLC domain-containing protein At5g14285-like [Benincasa hispida])

HSP 1 Score: 368 bits (944), Expect = 2.41e-126
Identity = 182/230 (79.13%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 4   QLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPT 63
            LPLFF MFLFVY FAY VLLRNWGPK RLEASSCFISLAHG+PVVI+A IAILQ+PN  
Sbjct: 11  SLPLFFFMFLFVYAFAYLVLLRNWGPKQRLEASSCFISLAHGSPVVIMAVIAILQAPNMA 70

Query: 64  DFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGA 123
           DFAAPNTKFQALVLEYSIAYF LDLLHC+ FSP+DFVFIFHHLAVLYVFVTCNY+V CGA
Sbjct: 71  DFAAPNTKFQALVLEYSIAYFLLDLLHCILFSPDDFVFIFHHLAVLYVFVTCNYLVHCGA 130

Query: 124 VPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVV 183
           VPILGLLV+AELSSGCQN WTLAGY+R     AAKF++ + PYF +FYSVLRVGLAP+ V
Sbjct: 131 VPILGLLVLAELSSGCQNVWTLAGYKR-----AAKFQDLMAPYFFSFYSVLRVGLAPMFV 190

Query: 184 CKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFR 233
            KMGEFYV SL    NLIP WAWISW+ VIGMAIFGS+ W+GNHW+ WFR
Sbjct: 191 YKMGEFYVWSL--GENLIPKWAWISWMGVIGMAIFGSMSWIGNHWVFWFR 233

[Close]

BLAST of IVF0002085 vs. NCBI nr
Match: XP_022956623.1 (TLC domain-containing protein At5g14285-like [Cucurbita moschata])

HSP 1 Score: 342 bits (877), Expect = 5.02e-116
Identity = 168/232 (72.41%), Postives = 193/232 (83.19%), Query Frame = 0


Query: 8   FFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTDFAA 67
           FF MFLFVY FAY V+L+NWGPKHRLEASSCFISLAHG PVVI+A IAILQ+PN  DFAA
Sbjct: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMADFAA 77

Query: 68  PNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAVPIL 127
            NTK+Q LVLEYS+AYF +DLLH + F P DFVFI HHLAVLYVF TC+Y+V  GA+PIL
Sbjct: 78  LNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCHYLVSRGALPIL 137

Query: 128 GLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVCKMG 187
            LLV+AE SSGCQN WTLAGYRR ++ AAAKF++FV+PYF TFYS+LR G APV + KMG
Sbjct: 138 VLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMG 197

Query: 188 EFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 239
           EFYV S   + NLIP WAWISW+ VIG AIF S+LWVGNHW+LWFR T++ K
Sbjct: 198 EFYVSS--AAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFRRTKHGK 247

[Close]

BLAST of IVF0002085 vs. NCBI nr
Match: XP_023554709.1 (TLC domain-containing protein At5g14285-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342 bits (876), Expect = 6.88e-116
Identity = 169/237 (71.31%), Postives = 196/237 (82.70%), Query Frame = 0


Query: 3   LQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNP 62
           L L LFF MFLFVY FAY V+L+NWGPKHR+EASSCFISLAHG+PVVI+A IAILQ+PN 
Sbjct: 12  LALLLFFFMFLFVYVFAYLVVLQNWGPKHRIEASSCFISLAHGSPVVIMAIIAILQAPNM 71

Query: 63  TDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCG 122
            DFAA NTK+Q LVLEYS+AYF +DLLH + F P DFVFI HHLAVLYVF TC+Y+V  G
Sbjct: 72  ADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFATCHYLVRRG 131

Query: 123 AVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVV 182
           A+PIL LLV+AE SSGCQN WTLAGYRR ++ AAAKF++FV+PYF TFYS+LR G APV 
Sbjct: 132 ALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVF 191

Query: 183 VCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 239
           + KMGEFYV S   + NLIP WAWISW+ VIG AI  S+LWVGNHW+LWFR T++ K
Sbjct: 192 LHKMGEFYVSS--AAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTKHGK 246

[Close]

BLAST of IVF0002085 vs. TAIR 10
Match: AT3G25950.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 218.0 bits (554), Expect = 8.5e-57
Identity = 114/237 (48.10%), Postives = 155/237 (65.40%), Query Frame = 0


Query: 6   PLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPT-- 65
           P F  +FL VYT  Y ++ R W     L A SC +SL HGTP VI+A+ A+L +P     
Sbjct: 16  PSFLLLFLAVYTIGYFLVFRTWKQSSHLGA-SCLMSLFHGTPAVIMASHALLTTPRADVH 75

Query: 66  DFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGA 125
            FA+PNT  ++ VL++S+AYF++DLLH + F PNDF+FI HH+A LYVF TC + VG GA
Sbjct: 76  SFASPNTAVESNVLDFSMAYFTVDLLHYLIFLPNDFIFILHHIATLYVFATCRFAVGHGA 135

Query: 126 VPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVV 185
             +L LL++AE +S CQN WT+ GYR+ ++  A +  E ++P F  FY+V+R    PVV+
Sbjct: 136 HGLLLLLILAEATSACQNVWTITGYRKNDVALARRVRELLSPPFYLFYTVVRGLAGPVVL 195

Query: 186 CKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE 241
             M  FY GS    G ++P WAW+SWL VIG AI  S+LWV  +WL WFR   + K+
Sbjct: 196 YDMATFY-GSGAADG-VVPRWAWLSWLVVIGFAILVSILWVLRNWLDWFRENNSSKK 249

[Close]

BLAST of IVF0002085 vs. TAIR 10
Match: AT5G14280.1 (DNA-binding storekeeper protein-related )

HSP 1 Score: 215.3 bits (547), Expect = 5.5e-56
Identity = 115/244 (47.13%), Postives = 157/244 (64.34%), Query Frame = 0


Query: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64
           LP+FFSMFL +Y  AY ++ RNW P+ R EASSC IS+ HG+P V LAT A+  S +   
Sbjct: 331 LPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFSS-SERS 390

Query: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 124
           FA+ NT  Q  VL++S+AYF  DL H + F+PND +FI HH+A L+VF+TC ++V  GA 
Sbjct: 391 FASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLVFHGAC 450

Query: 125 PILGLLVVAELSSGCQNAWTLAGYRRT--EIVAAAKFEEFVTPYFLTFYSVLRVGLAPVV 184
            ILGLL++AE++S CQNAWTLAG R+   E   A K  + ++P F  FYS++R  L P+ 
Sbjct: 451 AILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVLGPLF 510

Query: 185 VCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEKV 244
             KM  FY      +  +IP W WISW  V+G+AI  S+LW+ N W+  F   +  K +V
Sbjct: 511 FGKMVAFYARG--GAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKANKIRV 570

Query: 245 SSYV 247
              +
Sbjct: 571 DKKI 571

[Close]

BLAST of IVF0002085 vs. TAIR 10
Match: AT3G27270.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-50
Identity = 112/240 (46.67%), Postives = 148/240 (61.67%), Query Frame = 0


Query: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64
           LPLFFS+F+FVY   Y  + + W P+ R  ASSC ISL HG   V+LAT A+L  PN   
Sbjct: 10  LPLFFSIFIFVYLLGYLFIFKKWTPETRPLASSCLISLLHGVSAVVLATNALLSDPN-RG 69

Query: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSF-SP--NDFVFIFHHLAVLYVFVTCNYIVGC 124
           F++ NT+ Q  +L++S AYF  DL+H   F SP   D +F  HHLAVL+VF+TC Y+V  
Sbjct: 70  FSSVNTQSQNSILDFSSAYFLADLVHLAVFPSPAGGDSLFAAHHLAVLFVFLTCRYMVAH 129

Query: 125 GAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPV 184
           GA  +L LLVVAE +S CQN WTLA  R  +   A     FVT  F   YSV R  LAP+
Sbjct: 130 GACALLALLVVAEATSACQNTWTLADARGKDAPLAVSLHRFVTVPFYASYSVCRCVLAPL 189

Query: 185 VVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEK 242
           ++ KM  FYV     + ++IP W W+SW  VI  A+  S+LW+ N W+L+F+   ++  K
Sbjct: 190 LIVKMTWFYVSG--GADDVIPRWVWVSWTVVIVTAVTVSILWIWNLWVLFFQERYSKFTK 246

The following BLAST results are available for this feature:

BLAST of IVF0002085 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYK7	7.7e-55	47.13	TLC domain-containing protein At5g14285 OS=Arabidopsis thaliana OX=3702 GN=At5g1...	[more]

BLAST of IVF0002085 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSM3	6.9e-139	100.00	TLC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BDR4	6.9e-139	100.00	uncharacterized protein LOC103488912 OS=Cucumis melo OX=3656 GN=LOC103488912 PE=...	[more]
A0A0A0KVB7	2.1e-124	93.72	TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G590130 PE=4 SV...	[more]
A0A6J1GXG9	5.9e-90	72.41	TLC domain-containing protein At5g14285-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KCU9	4.2e-88	71.12	TLC domain-containing protein At5g14285-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of IVF0002085 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446083.1	3.52e-180	100.00	PREDICTED: uncharacterized protein LOC103488912 [Cucumis melo] >KAA0034214.1 TLC...	[more]
XP_004135513.1	2.11e-161	93.72	TLC domain-containing protein At5g14285 [Cucumis sativus] >KGN51696.1 hypothetic...	[more]
XP_038892912.1	2.41e-126	79.13	TLC domain-containing protein At5g14285-like [Benincasa hispida]	[more]
XP_022956623.1	5.02e-116	72.41	TLC domain-containing protein At5g14285-like [Cucurbita moschata]	[more]
XP_023554709.1	6.88e-116	71.31	TLC domain-containing protein At5g14285-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0002085 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25950.1	8.5e-57	48.10	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT5G14280.1	5.5e-56	47.13	DNA-binding storekeeper protein-related	[more]
AT3G27270.1	1.2e-50	46.67	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 30..236 e-value: 5.4E-14 score: 62.5
None	No IPR available	PANTHER	PTHR31766:SF8	TRAM, LAG1 AND CLN8 (TLC) LIPID-SENSING DOMAIN CONTAINING PROTEIN	coord: 4..241
IPR040327	TLC domain-containing protein At5g14285-like	PANTHER	PTHR31766	GLABROUS1 ENHANCER-BINDING PROTEIN-LIKE 2	coord: 4..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002085.2	IVF0002085.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane