IVF0002055 (gene) Melon (IVF77) v1

Overview


Name	IVF0002055
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	tRNA-splicing endonuclease subunit Sen54
Location	chr08: 24669684 .. 24673375 (-)
RNA-Seq Expression	IVF0002055
Synteny	IVF0002055

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAGTAATTAAAAAAGTTAGATTACTACTGACTGCCAAAACCCTCTCCATAAATCTTGATTATTTCCTTCATTGCCTCCAACCGTTGCATCGTCACTACAAGTTCCCCGGATCTTCGGCCGTCGCTACTTTTGCCGACATCTCCCAGTCACTTCCGAGACCAACGCCGGTGAGCGTTTCGTGACGTTTCGGTGAGTTTTCTTGTTGTTTATTTTGTTACCCATGGCAGTGAAAATTCAATTCCGGTTTACCCACACTGTTTTAATATTAGATTCTAGAAAAAGTTTGAGGGGTTTAGAGTGCTTAAGGACATTTGGCGACTTTTCCGGTGAGATTTAACTTCCGATCATTTTTAAATCCGTCGTGCCTATGTTAGATTGAGCAATAACTTCTGAATTTTTGTTGTGTTTGAATGTATATGTGTAACAAACACACTGATTTTTTTAATGAATTTGACAGATTGGGTTTGGGTTTAAAGGGTTAATTTTAGTTTGTGTTGTGATAGGCAGTTCTCATGATTCAAATATCTGAAAACCTTACTCTTCTTATTCCACCATAAGAAAGACGAGGTCATTGTGTTGTTCAATAAACTGTTACCAAATGAAATTTCGGAATTAAGAATCACATCACATTAATATCTAGCAATCTTAGTAGTTTTGGGTTGTTATTTATTTCTCCGCGTTTCACTTTTACTATTTCACTACCATGGTTGTTCCCTGAACGAGGAGTCTCGATATTGTTAAACGTAATTTGTAATCTCCAATCTCAACATGACTTTTTAGAATACGTAAAGGTTATGTAATTTTATTGAGAGATCTATTTCCTAGGTCGTTAATCGGGATTCTCCAGAGACTTCTGTTGACACCTATAAATAATAGAGGTGTTCTCTCCCTTGTAACGAAGTAATTAAGAAGCTAAGAAAGCTCCAATTGAGCCTATGTGTCAAAGCACTGAATAGAAGAAGTTTCTTGTTAGATACCTAGATTAGTATAGGGTTAGGGGTATAAGGGTAATTGGATACGATAGGAAGTTACTAATAGTCATCGTGTAAGTGTGGTTACTAGGGTGGTTACAACTTGTTATAAATATAGGGAGGGTAAGTGATAAAGGGAGGAATCAGTTTGTGTAGTTTCTGCACTGTTCCTTGAGAGAGAGGATAGGCAGAGAGGGTAGTATATTACTTTTGGTTCATAGTTTTCGGTACTTTTCAACTCAGAATTGATAAGTCATCAATTCTTCTTTGTAATCATTGAAGTATTTTCATTCAAATTAGAACAGACCTACTTGGTGTTCTATCATTTCTCCACAATTTTCCATCTATTCTAAACTCTTGCCTAATTCTCCTTCATTGCCTCTGATAGATATTTGGTTCGGAGGTTTGTGATGGAGGCTACGAATTGGAAAAGCTCTTCAGGAGGAGCTAGTGATACTGGTGATGAAGACAATTACGAACAAGACATAAACGACGAAGAAGAATGTCTCAGTGCATCGCGGTGCTTGCGCAAGTTGCAATTCAGGTTGAGGATTTCAAGAAGTTAAACTCCTCTGAATCCCTCAGTAGGATGATGCTATTTGATTATTATCAAGTGTGTTACAATATTTTATCTGTTTCTAGGAAGCATGCTTCAACTGCTCGATGGAACGATCAAATGGGAATGGCAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACGACAACTGGCATTGTACGTTGTGGCAAGATTTATTGTACCATTGAGGAAACTTTGTAGGTTAAACTATGAGTTTATTATGGTTTTGTTATCCTGATTGTTTTTTGATATTTACCACAACACTTTTTGGGGAATTCTTCTCTTTTGCATTGTCTGAATTTGATTTCTTTTAAGTAATAGGGTAATATCATTGAAAACAAAAAGAAATTGGAAACGTTTCGAAGCCAGGGCCAGAAATTGGCCTATGTGGTGAGGAGAGCTGCATTACGTGCATCTTGCAATTACCTTGGTCGCCTCTTGGTCAGTTTTTTTAATTGCGTTTAGGTTGTCTTTGGGCCTGTATTTAGACCATTGCATTATGAATAAAGTGAAGAAATTCTAACAAAAAATATACAAGAGGAAGCTGCCTTTTATGTCTTAGTAAAGGCATTTAAGTAGAAAATATCCTCTTTTCTATTTAAGGATTGCAATTTCTTTTGAGACATTCAGAAACAAATTTTATGAGCGCCATCAAAATTTCTTTTCTATATTTTCAGATTTCTTATTGAAGTCGGGGCCTTACATCTTTTGGATCATGATAATTCAACTCTTTCGTTGAAAGATGTATATAAGAAGGTAGCTGAAGGAAGAAGTGGCTGTATCTGGGAGCAGTTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTACATTGTTGGAAAGCATAAAGTTCCTTGGTCTCTAAAGAATGTTAGGAATGACTGTGACCTTTCATCTCCAAGTTCTACTGAAAAGAAAGGAGTATCAGATGTCAAATCAGAAGATGAGCAGTTGATTTCCGGGCTATTAAATGCCATTCAGCTCGATGAAGTGACACCCATTTTTGATGTTTTTCTTCCACATAACAAATTTAGAAAATCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGGCTAGGTAACATTTTCCTCTATAACATAGTCTGCAGTATGAGTTTTGTGTTCAATTTCTTAAGTGACACACATATGATGTAGCAGTTTCGGAAGAAAATTAGTTAAATGTTTCCTGTATAAACACTCTATATACTTTTTACTAATTTCTAGAATTTCTCAAACTACTTCTCATTATTAGATCTTTTTAAAAATGCGAAAACACCTTTTACTACTCAACCATTTGATTTAACTGCCTACCCCTATCTGAATAAACTGGCATGCAAACTTGCCAAAATGAGCATAGCAATAGATTATACTCTCAATCTTGTCAATCTTGAAATTAGAGATTCGATGCACCTTTCCTCCACATATTGTTAAAAAAACAAAAAAGTCAATGGTTCTGAAATTGTTTATGTATTGTATCGATTTTCTTTTTTAGCCTTTTGCGACCATTTAGTTGTATTCTTGTAATAACACTAATATCTAATAATAGGTTTCAACTCATGTCGTGCCTTTTATTGGAAAATTCTATGCATTACTTAGAATTGATTTGATTCTTTAATTCATGTGGTATCATTTATTTCTCTTATAGGGGATATCCACCATCAAAAGAAGAGATTGAAGTTCTTGAGAGAACATCAAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGAAGAGTCTGCTTCTTTTCATTTGATAAGGTGGAGCTCCCTCTCTTACCTTGACATTGTTGTGGATTACTCTGCTATCCATCATCATCATCATCATCATCATCATTTCTATTAGTAGTTGGTGTTTTATTTGAATTTTATTTTATGTTTTCTTTTGAGTCATGAGCACAGGGATTCCTATTTCTTGTATTCAGCTGCTATAGCTTGTTTCTTGAAATTGATTATATGAACTACTTTGGATAGGGCTGGTTCTTTATTGTTGGAGCACACAAATAGGTGGAAGAAAAGGGTTTAAATGTTGATATCCTCCCAGAATTATTAATTTGATTAAAAAAAAGGGAAAAACTAGCTCATGTTTGTTGGCACAAAGAAAAATGATTCAAGATTTTCATTTCCTGCTAGAAATTAGTCATC

mRNA sequence

TAGAGTAATTAAAAAAGTTAGATTACTACTGACTGCCAAAACCCTCTCCATAAATCTTGATTATTTCCTTCATTGCCTCCAACCGTTGCATCGTCACTACAAGTTCCCCGGATCTTCGGCCGTCGCTACTTTTGCCGACATCTCCCAGTCACTTCCGAGACCAACGCCGGTGAGCGTTTCGTGACGTTTCGATATTTGGTTCGGAGGTTTGTGATGGAGGCTACGAATTGGAAAAGCTCTTCAGGAGGAGCTAGTGATACTGGTGATGAAGACAATTACGAACAAGACATAAACGACGAAGAAGAATGTCTCAGTGCATCGCGGTGCTTGCGCAAGTTGCAATTCAGGAAGCATGCTTCAACTGCTCGATGGAACGATCAAATGGGAATGGCAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACGACAACTGGCATTGTACGTTGTGGCAAGATTTATTGTACCATTGAGGAAACTTTATTTCTTATTGAAGTCGGGGCCTTACATCTTTTGGATCATGATAATTCAACTCTTTCGTTGAAAGATGTATATAAGAAGGTAGCTGAAGGAAGAAGTGGCTGTATCTGGGAGCAGTTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTACATTGTTGGAAAGCATAAAGTTCCTTGGTCTCTAAAGAATGTTAGGAATGACTGTGACCTTTCATCTCCAAGTTCTACTGAAAAGAAAGGAGTATCAGATGTCAAATCAGAAGATGAGCAGTTGATTTCCGGGCTATTAAATGCCATTCAGCTCGATGAAGTGACACCCATTTTTGATGTTTTTCTTCCACATAACAAATTTAGAAAATCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGGCTAGGGGATATCCACCATCAAAAGAAGAGATTGAAGTTCTTGAGAGAACATCAAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGAAGAGTCTGCTTCTTTTCATTTGATAAGGTGGAGCTCCCTCTCTTACCTTGACATTGTTGTGGATTACTCTGCTATCCATCATCATCATCATCATCATCATCATTTCTATTAGTAGTTGGTGTTTTATTTGAATTTTATTTTATGTTTTCTTTTGAGTCATGAGCACAGGGATTCCTATTTCTTGTATTCAGCTGCTATAGCTTGTTTCTTGAAATTGATTATATGAACTACTTTGGATAGGGCTGGTTCTTTATTGTTGGAGCACACAAATAGGTGGAAGAAAAGGGTTTAAATGTTGATATCCTCCCAGAATTATTAATTTGATTAAAAAAAAGGGAAAAACTAGCTCATGTTTGTTGGCACAAAGAAAAATGATTCAAGATTTTCATTTCCTGCTAGAAATTAGTCATC

Coding sequence (CDS)

ATGGAGGCTACGAATTGGAAAAGCTCTTCAGGAGGAGCTAGTGATACTGGTGATGAAGACAATTACGAACAAGACATAAACGACGAAGAAGAATGTCTCAGTGCATCGCGGTGCTTGCGCAAGTTGCAATTCAGGAAGCATGCTTCAACTGCTCGATGGAACGATCAAATGGGAATGGCAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACGACAACTGGCATTGTACGTTGTGGCAAGATTTATTGTACCATTGAGGAAACTTTATTTCTTATTGAAGTCGGGGCCTTACATCTTTTGGATCATGATAATTCAACTCTTTCGTTGAAAGATGTATATAAGAAGGTAGCTGAAGGAAGAAGTGGCTGTATCTGGGAGCAGTTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTACATTGTTGGAAAGCATAAAGTTCCTTGGTCTCTAAAGAATGTTAGGAATGACTGTGACCTTTCATCTCCAAGTTCTACTGAAAAGAAAGGAGTATCAGATGTCAAATCAGAAGATGAGCAGTTGATTTCCGGGCTATTAAATGCCATTCAGCTCGATGAAGTGACACCCATTTTTGATGTTTTTCTTCCACATAACAAATTTAGAAAATCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGGCTAGGGGATATCCACCATCAAAAGAAGAGATTGAAGTTCTTGAGAGAACATCAAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGAAGAGTCTGCTTCTTTTCATTTGATAAGGTGGAGCTCCCTCTCTTACCTTGA

Protein sequence

MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGRSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP

Homology

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BLAST of IVF0002055 vs. ExPASy Swiss-Prot
Match: Q7Z6J9 (tRNA-splicing endonuclease subunit Sen54 OS=Homo sapiens OX=9606 GN=TSEN54 PE=1 SV=3)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-08
Identity = 30/91 (32.97%), Postives = 49/91 (53.85%), Query Frame = 0


Query: 51  ARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLK 110
           A W  + G  E+    G  W T G    G+     EE L+L+E G++HL  H +  LS++
Sbjct: 80  AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 139

Query: 111 DVYKKVAEGRSGCIWEQFEVYRHLKSLGYIV 142
           + Y+ +    +   + Q++V+ HLK LGY+V
Sbjct: 140 EAYQLLLTDHT-VTFLQYQVFSHLKRLGYVV 168

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BLAST of IVF0002055 vs. ExPASy Swiss-Prot
Match: O74908 (Probable tRNA-splicing endonuclease subunit sen54 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sen54 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 59/226 (26.11%), Postives = 97/226 (42.92%), Query Frame = 0


Query: 2   EATNWKSSSGGASDTG-------DEDNYEQD-INDEEECLSASR-------CLRKLQFRK 61
           E  +W+  S    D G        + ++E D  N +   L  SR        + +L   K
Sbjct: 22  EIQDWRFLSNVEKDQGTYTIPKRGQKDFEPDGTNKQHSALDLSRKAMFDALSVERLISAK 81

Query: 62  HASTARWNDQMGMAEVLENKGSLWTTTGIVRC-GKIYCTIEETLFLIEVGALHLLDHDNS 121
           HA  A WN Q GM+ V +  G L+ T G      +++   EETL+L+E G++     +  
Sbjct: 82  HAIIATWNAQNGMSCVEKAHGPLFKTMGTADSQNRMWLLPEETLYLVERGSMECWSEEGL 141

Query: 122 TLSLKDVYKKVAEGRSGCIWEQFEVYRHLKSLGY-IVGKHKVPWSLKNVRNDCDLSSPSS 181
            +SL+ VY   +    G + E + VY HL+  G+ ++  + VP  +K     CD      
Sbjct: 142 PMSLQAVY-SASIPLCGSL-ENYLVYAHLRRCGFSVIRSNLVP--VKEDEYRCD------ 201

Query: 182 TEKKGVSDVKSEDEQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSS 211
                 S + +  + L  GL  A Q+ +      +  P +K R+ S
Sbjct: 202 ------SKIMNFKDLLFLGLGKASQILQTFNFRKLAFPFSKRRRQS 231

[Close]

BLAST of IVF0002055 vs. ExPASy Swiss-Prot
Match: Q74ZJ5 (tRNA-splicing endonuclease subunit SEN54 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SEN54 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.0e-04
Identity = 30/102 (29.41%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 51  ARWNDQMGMAEVLENKGSLWTTTGIV-RCGKIYCTIEETLFLIEVGAL----------HL 110
           A W ++  MA +   +GS   T G V + G+ +  + E ++L+E G +            
Sbjct: 88  AYWEEEQRMARIPNARGSFTNTMGKVDKHGQCWLQLHEFVYLVERGTVSPYLALTVGDEK 147

Query: 111 LDHDNSTLSLKDVYKKVAEGRSGCIWEQFEVYRHLKSLGYIV 142
            +H++  LS++DVY   +        ++F VY HLK LG+IV
Sbjct: 148 SNHEDVLLSVQDVYALFSSTEE---LDEFLVYAHLKRLGFIV 186

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BLAST of IVF0002055 vs. ExPASy TrEMBL
Match: A0A1S4E447 (uncharacterized protein LOC103501474 OS=Cucumis melo OX=3656 GN=LOC103501474 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.2e-150
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120
           EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120

Query: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180
           SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL
Sbjct: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180

Query: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240
           ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG
Sbjct: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240

Query: 241 IPMKYCHVEHGRVCFFSFDK 261
           IPMKYCHVEHGRVCFFSFDK
Sbjct: 241 IPMKYCHVEHGRVCFFSFDK 260

[Close]

BLAST of IVF0002055 vs. ExPASy TrEMBL
Match: A0A0A0KXV5 (tRNA_int_end_N2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G334710 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.2e-146
Identity = 252/267 (94.38%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           MEATNW+SSSGGASDTGDEDNYEQDINDEEECLSAS CLRKLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWESSSGGASDTGDEDNYEQDINDEEECLSASGCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120
           EVLENKGSLWTTTGIVRCGKIYC+IEETLFLIEVGALHLLDHDNS+LSLKDVYKKVAEGR
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGR 120

Query: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180
           SG +WEQFEVYRHLKSLGYIVGKH+VPWSLKNVRNDCD+SSPSSTE KG SDVKS+DEQ 
Sbjct: 121 SGRLWEQFEVYRHLKSLGYIVGKHRVPWSLKNVRNDCDISSPSSTENKGASDVKSDDEQS 180

Query: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240
           I  LLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCL RGYPPSKEEIEVLERTSRG
Sbjct: 181 ICRLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGYPPSKEEIEVLERTSRG 240

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 268
           IPMKYCHVEHGRVCFFSFDKVELPLLP
Sbjct: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267

[Close]

BLAST of IVF0002055 vs. ExPASy TrEMBL
Match: A0A5D3CEX0 (tRNA-splicing endonuclease subunit Sen54-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00360 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.6e-125
Identity = 232/274 (84.67%), Postives = 239/274 (87.23%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTG---IVRCGKIYCTI----EETLFLIEVGALHLLDHDNSTLSLKDVY 120
           EVLENKGSLWTTTG   I+   K   T     ++  +++   AL    +    L      
Sbjct: 61  EVLENKGSLWTTTGIGNIIENKKKLETFRSQGQKLAYVVRRAALRASCNYLGRL------ 120

Query: 121 KKVAEGRSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDV 180
             VAEGRSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDV
Sbjct: 121 -LVAEGRSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDV 180

Query: 181 KSEDEQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEV 240
           KSEDEQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEV
Sbjct: 181 KSEDEQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEV 240

Query: 241 LERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP 268
           LERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP
Sbjct: 241 LERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP 267

[Close]

BLAST of IVF0002055 vs. ExPASy TrEMBL
Match: A0A6J1I8D9 (tRNA-splicing endonuclease subunit Sen54 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111471897 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.1e-124
Identity = 216/267 (80.90%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           MEAT+W+ SSGGASD  D+DN+EQDI +EEECL +S  +RKLQFRKHASTARWND+MGMA
Sbjct: 1   MEATDWEISSGGASD--DDDNFEQDIKEEEECLRSSGNMRKLQFRKHASTARWNDEMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120
           EVLENKGSLWTT+GIVRCGKIYC+IEETLFLIEVGALHLLDHDNS+LSLKDVYKKVAEG+
Sbjct: 61  EVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGK 120

Query: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180
           S CIWEQFEVYRHLKSLGYIVGKHKVPWS+K  RN  D+SS SS E KG +D +SEDE+ 
Sbjct: 121 SECIWEQFEVYRHLKSLGYIVGKHKVPWSVKGARNGGDISSRSSIENKGSTDFESEDEKS 180

Query: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240
           I  LLNA+QL+E+TPIFDV+LPH+KFRKSSPGDPNFMVCL RGYPP K +IEV+ER S G
Sbjct: 181 ICELLNAVQLNELTPIFDVYLPHSKFRKSSPGDPNFMVCLTRGYPPPKTDIEVIERKSGG 240

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 268
           IPMKYCHVEHGRVCFFSFDKV+LP+LP
Sbjct: 241 IPMKYCHVEHGRVCFFSFDKVKLPVLP 265

[Close]

BLAST of IVF0002055 vs. ExPASy TrEMBL
Match: A0A6J1ICR8 (tRNA-splicing endonuclease subunit Sen54 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471897 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.1e-124
Identity = 216/267 (80.90%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           MEAT+W+ SSGGASD  D+DN+EQDI +EEECL +S  +RKLQFRKHASTARWND+MGMA
Sbjct: 5   MEATDWEISSGGASD--DDDNFEQDIKEEEECLRSSGNMRKLQFRKHASTARWNDEMGMA 64

Query: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120
           EVLENKGSLWTT+GIVRCGKIYC+IEETLFLIEVGALHLLDHDNS+LSLKDVYKKVAEG+
Sbjct: 65  EVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGK 124

Query: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180
           S CIWEQFEVYRHLKSLGYIVGKHKVPWS+K  RN  D+SS SS E KG +D +SEDE+ 
Sbjct: 125 SECIWEQFEVYRHLKSLGYIVGKHKVPWSVKGARNGGDISSRSSIENKGSTDFESEDEKS 184

Query: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240
           I  LLNA+QL+E+TPIFDV+LPH+KFRKSSPGDPNFMVCL RGYPP K +IEV+ER S G
Sbjct: 185 ICELLNAVQLNELTPIFDVYLPHSKFRKSSPGDPNFMVCLTRGYPPPKTDIEVIERKSGG 244

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 268
           IPMKYCHVEHGRVCFFSFDKV+LP+LP
Sbjct: 245 IPMKYCHVEHGRVCFFSFDKVKLPVLP 269

[Close]

BLAST of IVF0002055 vs. NCBI nr
Match: XP_016902999.1 (PREDICTED: uncharacterized protein LOC103501474 [Cucumis melo])

HSP 1 Score: 537 bits (1383), Expect = 1.88e-192
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120
           EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120

Query: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180
           SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL
Sbjct: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180

Query: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240
           ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG
Sbjct: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240

Query: 241 IPMKYCHVEHGRVCFFSFDK 260
           IPMKYCHVEHGRVCFFSFDK
Sbjct: 241 IPMKYCHVEHGRVCFFSFDK 260

[Close]

BLAST of IVF0002055 vs. NCBI nr
Match: XP_011653726.1 (uncharacterized protein LOC101210680 isoform X2 [Cucumis sativus] >KGN54460.1 hypothetical protein Csa_012673 [Cucumis sativus])

HSP 1 Score: 523 bits (1346), Expect = 7.36e-187
Identity = 252/267 (94.38%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           MEATNW+SSSGGASDTGDEDNYEQDINDEEECLSAS CLRKLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWESSSGGASDTGDEDNYEQDINDEEECLSASGCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120
           EVLENKGSLWTTTGIVRCGKIYC+IEETLFLIEVGALHLLDHDNS+LSLKDVYKKVAEGR
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGR 120

Query: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180
           SG +WEQFEVYRHLKSLGYIVGKH+VPWSLKNVRNDCD+SSPSSTE KG SDVKS+DEQ 
Sbjct: 121 SGRLWEQFEVYRHLKSLGYIVGKHRVPWSLKNVRNDCDISSPSSTENKGASDVKSDDEQS 180

Query: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240
           I  LLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCL RGYPPSKEEIEVLERTSRG
Sbjct: 181 ICRLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGYPPSKEEIEVLERTSRG 240

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267
           IPMKYCHVEHGRVCFFSFDKVELPLLP
Sbjct: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267

[Close]

BLAST of IVF0002055 vs. NCBI nr
Match: XP_031739606.1 (uncharacterized protein LOC101210680 isoform X1 [Cucumis sativus])

HSP 1 Score: 480 bits (1236), Expect = 5.97e-170
Identity = 241/276 (87.32%), Postives = 248/276 (89.86%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           MEATNW+SSSGGASDTGDEDNYEQDINDEEECLSAS CLRKLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWESSSGGASDTGDEDNYEQDINDEEECLSASGCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGI------VRCGKIYCTIEETL---FLIEVGALHLLDHDNSTLSLKD 120
           EVLENKGSLWTTTGI       R  K +          FLIEVGALHLLDHDNS+LSLKD
Sbjct: 61  EVLENKGSLWTTTGIGNVIENKRNWKRFQAKARNWPMRFLIEVGALHLLDHDNSSLSLKD 120

Query: 121 VYKKVAEGRSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVS 180
           VYKKVAEGRSG +WEQFEVYRHLKSLGYIVGKH+VPWSLKNVRNDCD+SSPSSTE KG S
Sbjct: 121 VYKKVAEGRSGRLWEQFEVYRHLKSLGYIVGKHRVPWSLKNVRNDCDISSPSSTENKGAS 180

Query: 181 DVKSEDEQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEI 240
           DVKS+DEQ I  LLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCL RGYPPSKEEI
Sbjct: 181 DVKSDDEQSICRLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGYPPSKEEI 240

Query: 241 EVLERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP 267
           EVLERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP
Sbjct: 241 EVLERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP 276

[Close]

BLAST of IVF0002055 vs. NCBI nr
Match: XP_038883355.1 (uncharacterized protein LOC120074337 [Benincasa hispida] >XP_038883356.1 uncharacterized protein LOC120074337 [Benincasa hispida] >XP_038883357.1 uncharacterized protein LOC120074337 [Benincasa hispida])

HSP 1 Score: 466 bits (1198), Expect = 2.47e-164
Identity = 224/267 (83.90%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           MEA +W+SSSGGAS  GDEDNYE+DIN+EEECL AS  LRKLQFRKHASTARWND+MGMA
Sbjct: 1   MEAVDWESSSGGAS--GDEDNYEEDINNEEECLCASGYLRKLQFRKHASTARWNDRMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120
           EVLENKGSLWTTTGIVRCGKIYC+IEETLFLIEVGALHLLDHDNS+LSL+DVYKK+AEG+
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLEDVYKKIAEGK 120

Query: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180
           +GC+WEQFEVYRHLKSLG+IVGKHKVPWSLK+VR+  ++SSPSS E KG SDVKSEDE+ 
Sbjct: 121 NGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRDGSNISSPSSIENKGASDVKSEDERS 180

Query: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240
           IS LL+ IQL+EV PIFDVFLPHNKFRKSSPGDPNFMV L RGYPPSK+++EVL RTSRG
Sbjct: 181 ISELLDGIQLEEVMPIFDVFLPHNKFRKSSPGDPNFMVYLTRGYPPSKKDLEVLARTSRG 240

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267
           IPMKYCHVEHGRVCFFSFD VELP+LP
Sbjct: 241 IPMKYCHVEHGRVCFFSFDTVELPILP 265

[Close]

BLAST of IVF0002055 vs. NCBI nr
Match: TYK09754.1 (tRNA-splicing endonuclease subunit Sen54-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 453 bits (1166), Expect = 2.00e-159
Identity = 231/274 (84.31%), Postives = 238/274 (86.86%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCTIE-------ETLFLIEVGALHLLDHDNSTLSLKDVY 120
           EVLENKGSLWTTTGI    +    +E       +  +++   AL    +    L      
Sbjct: 61  EVLENKGSLWTTTGIGNIIENKKKLETFRSQGQKLAYVVRRAALRASCNYLGRLL----- 120

Query: 121 KKVAEGRSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDV 180
             VAEGRSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDV
Sbjct: 121 --VAEGRSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDV 180

Query: 181 KSEDEQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEV 240
           KSEDEQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEV
Sbjct: 181 KSEDEQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEV 240

Query: 241 LERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP 267
           LERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP
Sbjct: 241 LERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP 267

[Close]

BLAST of IVF0002055 vs. TAIR 10
Match: AT3G57360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits to 122 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 236.5 bits (602), Expect = 2.5e-62
Identity = 115/267 (43.07%), Postives = 173/267 (64.79%), Query Frame = 0


Query: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60
           ME  +W++SS   ++ G         ND++E   +   + KLQFR  +S ARW  ++GMA
Sbjct: 1   MEEKDWEASSSSENEGGFP-------NDDDEEFHSGGSVPKLQFRVGSSKARWITELGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLL-DHDNSTLSLKDVYKKVAEG 120
           EV   +G LWTTTGI+R GK YC IEE L+L E+G L +L + D+  + LKD+Y+K+AE 
Sbjct: 61  EVEVKRGKLWTTTGIIRSGKTYCFIEEALYLSEIGELQILGNEDDIVIPLKDLYEKIAEE 120

Query: 121 RSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQ 180
           +SGC WE +EVYR+LK LGYI+G+H V W+LK      D + P+  E+   +     D  
Sbjct: 121 KSGCSWENYEVYRYLKGLGYILGRHGVSWTLK------DAARPNGEEESACAGECPADND 180

Query: 181 LISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSR 240
            ++ LL  +Q+ +   +FDV+LP+++F+KSSPG+P+F+ C +   PPSKE+I+VL++   
Sbjct: 181 TVTKLLGDMQICDAKAVFDVYLPNSRFKKSSPGEPSFVACFSGDSPPSKEDIKVLQKRI- 240

Query: 241 GIPMKYCHVEHGRVCFFSFDKVELPLL 267
             P+ +CH+  GR  FFSF  ++LP+L
Sbjct: 241 AAPLTFCHIAQGRASFFSFSSIDLPVL 253

[Close]

BLAST of IVF0002055 vs. TAIR 10
Match: AT3G02370.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57360.1). )

HSP 1 Score: 182.2 bits (461), Expect = 5.5e-46
Identity = 85/175 (48.57%), Postives = 123/175 (70.29%), Query Frame = 0


Query: 59  MAEVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLL-DHDNSTLSLKDVYKKVA 118
           MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L LL D D+  +SLKD+Y ++A
Sbjct: 1   MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 60

Query: 119 EGRSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSED 178
           EG+ GC WE +EVYR+LK LGYI+G+H VPW+ K   N    ++PS  ++   +    +D
Sbjct: 61  EGKYGCCWENYEVYRYLKGLGYILGRHGVPWTTKYAVN----TTPSDEDESLCAAEFFQD 120

Query: 179 EQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIE 233
              ++ LL+ + + +  P+FDV+LP+++F+KSSPG+P+F+ C +   PPSKEEI+
Sbjct: 121 RDSVTKLLSDMHICDARPVFDVYLPNSQFKKSSPGEPSFVTCFSGDSPPSKEEIK 171

[Close]

BLAST of IVF0002055 vs. TAIR 10
Match: AT3G02370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57360.1); Has 95 Blast hits to 95 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 169.5 bits (428), Expect = 3.7e-42
Identity = 78/164 (47.56%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 59  MAEVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLL-DHDNSTLSLKDVYKKVA 118
           MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L LL D D+  +SLKD+Y ++A
Sbjct: 1   MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 60

Query: 119 EGRSGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSED 178
           EG+ GC WE +EVYR+LK LGYI+G+H VPW+ K   N    ++PS  ++   +    +D
Sbjct: 61  EGKYGCCWENYEVYRYLKGLGYILGRHGVPWTTKYAVN----TTPSDEDESLCAAEFFQD 120

Query: 179 EQLISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLA 222
              ++ LL+ + + +  P+FDV+LP+++F+KSSPG+P+F+ C +
Sbjct: 121 RDSVTKLLSDMHICDARPVFDVYLPNSQFKKSSPGEPSFVTCFS 160

The following BLAST results are available for this feature:

BLAST of IVF0002055 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7Z6J9	3.4e-08	32.97	tRNA-splicing endonuclease subunit Sen54 OS=Homo sapiens OX=9606 GN=TSEN54 PE=1 ...	[more]
O74908	1.2e-05	26.11	Probable tRNA-splicing endonuclease subunit sen54 OS=Schizosaccharomyces pombe (...	[more]
Q74ZJ5	3.0e-04	29.41	tRNA-splicing endonuclease subunit SEN54 OS=Ashbya gossypii (strain ATCC 10895 /...	[more]

BLAST of IVF0002055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E447	3.2e-150	100.00	uncharacterized protein LOC103501474 OS=Cucumis melo OX=3656 GN=LOC103501474 PE=...	[more]
A0A0A0KXV5	6.2e-146	94.38	tRNA_int_end_N2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G33...	[more]
A0A5D3CEX0	4.6e-125	84.67	tRNA-splicing endonuclease subunit Sen54-like isoform X1 OS=Cucumis melo var. ma...	[more]
A0A6J1I8D9	5.1e-124	80.90	tRNA-splicing endonuclease subunit Sen54 isoform X3 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1ICR8	5.1e-124	80.90	tRNA-splicing endonuclease subunit Sen54 isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of IVF0002055 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902999.1	1.88e-192	100.00	PREDICTED: uncharacterized protein LOC103501474 [Cucumis melo]	[more]
XP_011653726.1	7.36e-187	94.38	uncharacterized protein LOC101210680 isoform X2 [Cucumis sativus] >KGN54460.1 hy...	[more]
XP_031739606.1	5.97e-170	87.32	uncharacterized protein LOC101210680 isoform X1 [Cucumis sativus]	[more]
XP_038883355.1	2.47e-164	83.90	uncharacterized protein LOC120074337 [Benincasa hispida] >XP_038883356.1 unchara...	[more]
TYK09754.1	2.00e-159	84.31	tRNA-splicing endonuclease subunit Sen54-like isoform X1 [Cucumis melo var. maku...	[more]

BLAST of IVF0002055 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57360.1	2.5e-62	43.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02370.2	5.5e-46	48.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02370.1	3.7e-42	47.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024336	tRNA-splicing endonuclease, subunit Sen54, N-terminal	PFAM	PF12928	tRNA_int_end_N2	coord: 43..99 e-value: 1.1E-9 score: 38.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
IPR024337	tRNA-splicing endonuclease, subunit Sen54	PANTHER	PTHR21027	TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54	coord: 1..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002055.2	IVF0002055.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0000379	tRNA-type intron splice site recognition and cleavage
cellular_component	GO:0000214	tRNA-intron endonuclease complex
molecular_function	GO:0004519	endonuclease activity