IVF0002045 (gene) Melon (IVF77) v1

Overview
NameIVF0002045
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr11: 26587187 .. 26587700 (+)
RNA-Seq ExpressionIVF0002045
SyntenyIVF0002045
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGAAGGGTATTAGCGTCTTTTCAACTTTTCCTTTTCTCTATTTTTTCCCCCGGATTCCCTCTTTGTATTTCTGCTCTGCAAGGCTTTGTTTGGTCTTCAGATTGCATGAGGAGAGATATATAGCGAAGGAAAATAGAAATGAGGATAGAACTATACGGTGTCGTTTCGCGGAAGGTGAAAAATTAAACTAAAATTTATTTATTGGAGAAAAAAATAATAAAAAGAAAAGAAAAGAGCGTTGGTCTAATCTTAATCTCACCGACCCCTCGCAAAATGACGCGTGAAGACAGAAAGTGATTGGCCGCCTTGTTTGAGCGAGAAGAGAGAGTGTGTGTTGGATACGTGGCAGAATATGACTCGGTCTTGGAAGGTGGGGCCAACTCACACGTACCCTGTTTTAACGGGAACCGTCAAGTAGAAGTTACGGAGTTTAGGATTCACGTCGTCGCTGGCTTGAACTATTTCTTGGATGACGCCGTTGGTGGTGGGGGTTACGAAGAGTGTTAG

mRNA sequence

ATGAAGAAGAAGGGTATTAGCGTCTTTTCAACTTTTCCTTTTCTCTATTTTTTCCCCCGGATTCCCTCTTTGTATTTCTGCTCTGCAAGGCTTTGTTTGGTCTTCAGATTGCATGAGGAGAGATATATAGCGAAGGAAAATAGAAATGAGGATAGAACTATACGGTGTCGTTTCGCGGAAGAAGAGAGAGTGTGTGTTGGATACGTGGCAGAATATGACTCGGTCTTGGAAGGTGGGGCCAACTCACACGTACCCTGTTTTAACGGGAACCGTCAAGTAGAAGTTACGGAGTTTAGGATTCACGTCGTCGCTGGCTTGAACTATTTCTTGGATGACGCCGTTGGTGGTGGGGGTTACGAAGAGTGTTAG

Coding sequence (CDS)

ATGAAGAAGAAGGGTATTAGCGTCTTTTCAACTTTTCCTTTTCTCTATTTTTTCCCCCGGATTCCCTCTTTGTATTTCTGCTCTGCAAGGCTTTGTTTGGTCTTCAGATTGCATGAGGAGAGATATATAGCGAAGGAAAATAGAAATGAGGATAGAACTATACGGTGTCGTTTCGCGGAAGAAGAGAGAGTGTGTGTTGGATACGTGGCAGAATATGACTCGGTCTTGGAAGGTGGGGCCAACTCACACGTACCCTGTTTTAACGGGAACCGTCAAGTAGAAGTTACGGAGTTTAGGATTCACGTCGTCGCTGGCTTGAACTATTTCTTGGATGACGCCGTTGGTGGTGGGGGTTACGAAGAGTGTTAG

Protein sequence

MKKKGISVFSTFPFLYFFPRIPSLYFCSARLCLVFRLHEERYIAKENRNEDRTIRCRFAEEERVCVGYVAEYDSVLEGGANSHVPCFNGNRQVEVTEFRIHVVAGLNYFLDDAVGGGGYEEC
Homology
[Close]
BLAST of IVF0002045 vs. ExPASy TrEMBL
Match: A0A0A0KBE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G062330 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.5e-42
Identity = 96/135 (71.11%), Postives = 101/135 (74.81%), Query Frame = 0 

Query: 1   MKKKGISVFSTFPFL---YFFPRIPSLYFCSARLCLVFRLHEERYIAKENRNEDRT---- 60
           MKKKG+SVFST  FL   +F PRIPSLYFCSARLCLVFR  EERYIAKE RN+DR+    
Sbjct: 1   MKKKGVSVFSTLFFLFSIFFPPRIPSLYFCSARLCLVFRSREERYIAKEIRNDDRSDDVV 60

Query: 61  ----------IRCRFAEEERVCVGYVAEYDSVLEGGANSHVPCFNGNRQVEVTEFRIHVV 119
                     +   F  EERV V YVAEYDSVL GG NSHVPCFNGNRQVEVTEFR HVV
Sbjct: 61  SRKTREDRKRLAALFEREERVSVRYVAEYDSVLGGGPNSHVPCFNGNRQVEVTEFRFHVV 120

[Close]
BLAST of IVF0002045 vs. NCBI nr
Match: KGN46174.1 (hypothetical protein Csa_005312 [Cucumis sativus])

HSP 1 Score: 178 bits (452), Expect = 4.97e-55
Identity = 96/138 (69.57%), Postives = 101/138 (73.19%), Query Frame = 0 

Query: 1   MKKKGISVFSTFPFLY---FFPRIPSLYFCSARLCLVFRLHEERYIAKENRNEDRT---- 60
           MKKKG+SVFST  FL+   F PRIPSLYFCSARLCLVFR  EERYIAKE RN+DR+    
Sbjct: 1   MKKKGVSVFSTLFFLFSIFFPPRIPSLYFCSARLCLVFRSREERYIAKEIRNDDRSDDVV 60

Query: 61  ----------IRCRFAEEERVCVGYVAEYDSVLEGGANSHVPCFNGNRQVEVTEFRIHVV 120
                     +   F  EERV V YVAEYDSVL GG NSHVPCFNGNRQVEVTEFR HVV
Sbjct: 61  SRKTREDRKRLAALFEREERVSVRYVAEYDSVLGGGPNSHVPCFNGNRQVEVTEFRFHVV 120

The following BLAST results are available for this feature:
BLAST of IVF0002045 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0002045 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBE48.5e-4271.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G062330 PE=4 SV=1[more]
BLAST of IVF0002045 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46174.14.97e-5569.57hypothetical protein Csa_005312 [Cucumis sativus][more]
BLAST of IVF0002045 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002045.1IVF0002045.1mRNA