IVF0002041 (gene) Melon (IVF77) v1

Overview


Name	IVF0002041
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	rRNA-processing protein EFG1
Location	tig00000135: 1352131 .. 1355274 (-)
RNA-Seq Expression	IVF0002041
Synteny	IVF0002041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCATGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCGGCACGCCGATCGAAGGGTTTGGCCGTTGAAAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCGATCTGCCGAGCGCATGCTTCGCAAGGTTCCTTCCAATTCTTTTTTTTTTTTTTTCCTTCTTTCGCTTTTAGAAATCGTCGGTTGACATTGTAGTTCTGGGAGCTGTTCCAGTTCGTTTTAGGGTTTTGGGATTTGTTACCTGTTTAAGTTTGGTAAGATTTGTTGCTGGGGTTTCTCTTACGATCAAATAAAATAACACTTGATTCTTAGGATGGGTTTTTTTGCATGTTGAATTTGATTCATTGGGATTACTGGAGTTTAATATTGACATGTTTTAATTAGGATAAGTGTGTACTTACTATATGAAGTGACTCAAATGTTGAGGTGAATGATGTTATGGAGGATTGTTTAGTTTCTGTGTGGGTTTGGTTTTCGAGATATTTTTTGGTTATTACACCGAGTATCTTTTGATGAGGAAGATGCGTACCTTTGTTTTTTTTTTTTTTTTTGCTCCGACGTTTACTGTGCGTGTTTGTTGTTAATTTCATTCCTCCAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGTTGGCAGTTGAGCGCAAAATATTCTTGCGCGACAGGAAGATAAATTTTTTGGTAATACTTGGTAATAGTTTTTCTGTCATTTGATGGGGTTTGTTTTTCAAGCATGTGTCCAATTTTTATTTATTGTCTATTGTTCATTTTCTTTTAAAACCTTGCCCTTAATTCAGAGAGGAGAAAAATTGAAAGAAGAATTAGGCGGCTTGAGAAACTTCAGCGTGCTCCATCTGGCCAGTTTCAAGATTCAGATGTTGCAGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGGTATGTAATAGAACATTTATTTGTTGTAGAAGTATGCATATGTGAGTGTATGTGCATTTGTATACATTATGCATATAATATATTTATGTATGTATATAATGTATATAATAAATGCTTCCATATGCTGGAGATCATCTAACCTTTTCTTTTCTTTTCTTTTTGGTTGTAGTTACTTCATAGTCTTCACTATCCTGTTTTTCTTTCCTAAAATATCATCATGACACACATTTACTTTTTTCATTTTTTCTAATGCCAATACAAATTCTTAGACAACCCTGAATTCTTGCATTGTTGATTTACTTGTCTCTCATAAACTAGAGGAGGTATAAACTGTAGATTCAGCTTTTGTTTGCCACGTGCTTTGTTCTTTCCCCATTTACCCCTGAATGAAGAATCAACAATAGTTACAACAGATGTAGTGATAAGTATAGCACTTGGATTTTCATTAACCTCTATAATTGCAGACATGAAAGTTTTTCGTTTGAATGCAGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGGAAGTGATGATTCAGACATGGTTGATAGGAGAAAGAAGTTACGTGAGCAGATTAAAGCCAATTTGATTGCTGCGGCTGCTAGTGGAAAGGATTTAGAAGGTGGTTTCTTCAACATATTTTCTACTTTTTTCTCTCATATTTTTGGCTTAATTTTTTTTTCTGCCAAGTAGTTGGGGAATTTTCTTAGAATATAGGTTTATGGACGAAGTGCTACCTACAACATTTAGCAACCTAGTTAAATTTTAAAATCAACTTATTAGAAAAATGTTTAAATGTAGCCTTTTTTTTTTTCTGAAACCTTTGGGTTGAAAGAAAGACAAGGAACCTTGATACACGAGAACCTTTGGTTTGAAAGGATACCTTGTGACATTTCTTATATTTAGTTCTATTGGCTGCTTTATTTAAAATCTCCGTTGAGCAATTATAGTTTCAATGCTATTTTAGCAACCCATAGAACTTTTTGTCTTCTCTATGTTATCAACTTGTTGAACAACTTTTTCATTTAAACAATTTCCATTTGCTCAATGGAAATTGGTTTTATATATAGAAAAGTACATTTCCCCTAATATTTTGAATATTGTAGTTTTTTATAGTTGTTTTTATCAAGATCTTAATAGGCTCTTTTTAATGACGTGGAATTGACTCAAACAGAGACGGTAGTGAGGATGATGGGTTGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGTACAAGGTATGCAGGCTTTGAAGTTTCTTTCTATTCTTGTTTGATAATTTTTTGCGAGAGTTTGGCCGTTTGGGTATATTGAATGATCATCCTATGCTTTGGCAGGGAACAAGCTTACAGTACTTCCGGCAAAGCAGCATCCGGCATGTCTAGTGATGAAAAAAATCATCAGGTTTATATGTGATTGCTTTTGTCTTGTTCCCTCCCCGTCACGCACATCACTTTTTCCATCATCCTCTTATTTGACTAGCATTTTATGTAGAGGCAGATTTCTGCCAGAGCCTTGATGCCTCCTCCTCGTCCTACCAAATCATTTTCAAGTTCAGCTCAAGCTTGGACAAAAGCTGGATCTTCGTTGAGAAAATCTTCCACAAATCACAGGGCTGAATTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTGGATCTTTAAAGCTAGGGGATCCTCAAACTCCTCGCATACAGGTCAGAGCAGTAATATAAGTTCCAATTCTGATGCACACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAACAGGTATACCCCTTTTTACCAAAAATTCATTCCTTCACGCTAATATTTGTCTTCTACTTCATTAACTCCTGTGCTATGATAATTGAAATTCAATATTCGGAAAATTCTTATTGAAATTACCTGATAATTATAGCAGTATAGCAAGTGTAAATGTATAATGCATATTCCTAGTCTCGATCCCCTTCTCATATATCCTTGTAAGAAGTTGGCTGTTGCTTCAAAGTCCTCTCACTCCCCAGTTCCCACCATACACACACTTGTGAATTATTTATTTCCATGTGCTTGTGAAAGTACTTTGTACTCATTGACCAGTCCCCTTTTCACAGGTATGA

mRNA sequence

ATGGCCCATGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCGGCACGCCGATCGAAGGGTTTGGCCGTTGAAAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCGATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGTTGGCAGTTGAGCGCAAAATATTCTTGCGCGACAGGAAGATAAATTTTTTGAGGAGAAAAATTGAAAGAAGAATTAGGCGGCTTGAGAAACTTCAGCGTGCTCCATCTGGCCAGTTTCAAGATTCAGATGTTGCAGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGGAAGTGATGATTCAGACATGGTTGATAGGAGAAAGAAGTTACGTGAGCAGATTAAAGCCAATTTGATTGCTGCGGCTGCTAGTGGAAAGGATTTAGAAGACGGTAGTGAGGATGATGGGTTGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGTACAAGGGAACAAGCTTACAGTACTTCCGGCAAAGCAGCATCCGGCATGTCTAGTGATGAAAAAAATCATCAGAGGCAGATTTCTGCCAGAGCCTTGATGCCTCCTCCTCGTCCTACCAAATCATTTTCAAGTTCAGCTCAAGCTTGGACAAAAGCTGGATCTTCGTTGAGAAAATCTTCCACAAATCACAGGGCTGAATTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTCAGAGCAGTAATATAAGTTCCAATTCTGATGCACACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAACAGGTATGA

Coding sequence (CDS)

ATGGCCCATGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCGGCACGCCGATCGAAGGGTTTGGCCGTTGAAAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCGATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGTTGGCAGTTGAGCGCAAAATATTCTTGCGCGACAGGAAGATAAATTTTTTGAGGAGAAAAATTGAAAGAAGAATTAGGCGGCTTGAGAAACTTCAGCGTGCTCCATCTGGCCAGTTTCAAGATTCAGATGTTGCAGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGGAAGTGATGATTCAGACATGGTTGATAGGAGAAAGAAGTTACGTGAGCAGATTAAAGCCAATTTGATTGCTGCGGCTGCTAGTGGAAAGGATTTAGAAGACGGTAGTGAGGATGATGGGTTGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGTACAAGGGAACAAGCTTACAGTACTTCCGGCAAAGCAGCATCCGGCATGTCTAGTGATGAAAAAAATCATCAGAGGCAGATTTCTGCCAGAGCCTTGATGCCTCCTCCTCGTCCTACCAAATCATTTTCAAGTTCAGCTCAAGCTTGGACAAAAGCTGGATCTTCGTTGAGAAAATCTTCCACAAATCACAGGGCTGAATTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTCAGAGCAGTAATATAAGTTCCAATTCTGATGCACACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAACAGGTATGA

Protein sequence

MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFLRRKIERRIRRLEKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEDGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSQSSNISSNSDAHKPRRKRRPKKKKQQV

Homology

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BLAST of IVF0002041 vs. ExPASy Swiss-Prot
Match: Q09867 (rRNA-processing protein efg1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=efg1 PE=3 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 8.5e-06
Identity = 57/190 (30.00%), Postives = 94/190 (49.47%), Query Frame = 0


Query: 25  KKPKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDR 84
           K P    LK +IR  ER+L+K NLPA +R   E+ L GL++Q  +      ++KIF R +
Sbjct: 5   KGPGLSVLKKKIRDNERLLKKENLPANIRVEHERALLGLQEQLSMAQLEHKKQKIFERYK 64

Query: 85  KINFL-RRKIERRIRRLEK-LQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVAL 144
           K+ F  R+K ERRI++LEK L+       +       + K + DL Y++ +P   KYV+L
Sbjct: 65  KVRFFERKKAERRIKQLEKSLKDETMDDEKRKQCEKSMRKCQIDLMYIKEYPPLTKYVSL 124

Query: 145 FTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEDGSEDDGLLDMSEDDFFLCGSSSDE 204
           +         ++ ++ R +I A +     SG+  +  S     + + E        SS  
Sbjct: 125 YAEGTS----EQTEETRNRIWAEMEERFNSGRKHKIPSSGSNRVPVQE-------KSSTG 183

Query: 205 ADADDEWTDK 212
            D +DE+  +
Sbjct: 185 GDLEDEFLQR 183

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BLAST of IVF0002041 vs. ExPASy Swiss-Prot
Match: Q2UEF7 (rRNA-processing protein efg1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=efg1 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.9e-04
Identity = 46/162 (28.40%), Postives = 75/162 (46.30%), Query Frame = 0


Query: 27  PKSVSLKNQIRSAERML-RKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKI 86
           P    LK +IR  +R+L R +LPA+ R  QE+ L G     E   +     K+  +   +
Sbjct: 56  PSVNELKKRIRDVKRLLNRVDLPADARIVQERALAGYENDLEEEEKRRERSKMIKKYHFV 115

Query: 87  NFLRRK-IERRIRRLEKLQRAPSGQFQDS--------DVADQLSKLKEDLEYVRFFPKTE 146
            FL RK   + ++RLE+ ++  SG   DS         +A +L   + +L Y  ++P  E
Sbjct: 116 RFLDRKTASKDVKRLERREKEVSGSDLDSAAKEQKLAALAQKLRVARVNLNYTIYYPLAE 175

Query: 147 KYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEDG 179
           +Y+AL+  +         KK +E +K         G + EDG
Sbjct: 176 RYIALYADA---------KKKKEMVK--------DGNNDEDG 200

[Close]

BLAST of IVF0002041 vs. ExPASy TrEMBL
Match: A0A0A0L7B4 (rRNA-processing protein EFG1 OS=Cucumis sativus OX=3659 GN=Csa_3G143600 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.1e-149
Identity = 309/334 (92.51%), Postives = 312/334 (93.41%), Query Frame = 0


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRLEKLQRAPSGQFQDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-G 180
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ G
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQ 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQA STSGKAASGMSSDEKNHQRQ
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQ 240

Query: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------- 300
           ISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRS        
Sbjct: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS 300

Query: 301 -------QSSNISSNSDAHKPRRKRRPKKKKQQV 318
                  QSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 334

[Close]

BLAST of IVF0002041 vs. ExPASy TrEMBL
Match: A0A1S4DT25 (rRNA-processing protein EFG1 OS=Cucumis melo OX=3656 GN=LOC103483652 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.3e-147
Identity = 310/334 (92.81%), Postives = 311/334 (93.11%), Query Frame = 0


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRLEKLQRAPSGQFQDSDVADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-G 180
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ G
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQ 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQA STSGKAASGMSSDEK   RQ
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK-IIRQ 240

Query: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------- 300
           ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS        
Sbjct: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS 300

Query: 301 -------QSSNISSNSDAHKPRRKRRPKKKKQQV 318
                  QSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 333

[Close]

BLAST of IVF0002041 vs. ExPASy TrEMBL
Match: A0A5A7U718 (rRNA-processing protein EFG1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001000 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 6.1e-140
Identity = 287/303 (94.72%), Postives = 291/303 (96.04%), Query Frame = 0


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRLEKLQRAPSGQFQDSDVADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-G 180
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ G
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQ 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNH  Q
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNH--Q 240

Query: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSQSSNISSN 300
           ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS S     +
Sbjct: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS 300

Query: 301 SDA 302
           S++
Sbjct: 301 SNS 301

[Close]

BLAST of IVF0002041 vs. ExPASy TrEMBL
Match: A0A6J1IBA9 (rRNA-processing protein EFG1 OS=Cucurbita maxima OX=3661 GN=LOC111473089 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.5e-134
Identity = 287/334 (85.93%), Postives = 296/334 (88.62%), Query Frame = 0


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVNPAARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+ QEKKLE
Sbjct: 1   MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRLEKLQRAPSGQ QDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-G 180
           SKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLE+ G
Sbjct: 121 SKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQR- 240
           SEDDGLLDMSEDDFF+ GSSSDEADADDEWTDKS RE A STSGKAASGMSSDE+NHQR 
Sbjct: 181 SEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQ 240

Query: 241 QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS------- 300
           QISARALMPPPRPTKSF SSAQA +K GSSLRK STN RAE S+SSNTS  RS       
Sbjct: 241 QISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKVR 300

Query: 301 --------QSSNISSNSDAHKPRRKRRPKKKKQQ 317
                    SSNISSNSDAHKPRRKRRPKKKKQQ
Sbjct: 301 GSSNSQTGHSSNISSNSDAHKPRRKRRPKKKKQQ 334

[Close]

BLAST of IVF0002041 vs. ExPASy TrEMBL
Match: A0A6J1G415 (rRNA-processing protein EFG1 OS=Cucurbita moschata OX=3662 GN=LOC111450540 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.5e-134
Identity = 287/334 (85.93%), Postives = 296/334 (88.62%), Query Frame = 0


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVNPAARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+ QEKKLE
Sbjct: 1   MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRLEKLQRAPSGQ QDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-G 180
           SKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLE+ G
Sbjct: 121 SKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQR- 240
           SEDDGLLDMSEDDFF+ GSSSDEADADDEWTDKS RE A STSGKAASGMSSDE+NHQR 
Sbjct: 181 SEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQ 240

Query: 241 QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS------- 300
           QISARALMPPPRPTKSF SSAQA +K GSSLRK STN RAE S+SSNTS  RS       
Sbjct: 241 QISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR 300

Query: 301 --------QSSNISSNSDAHKPRRKRRPKKKKQQ 317
                    SSNISSNSDAHKPRRKRRPKKKKQQ
Sbjct: 301 GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQ 334

[Close]

BLAST of IVF0002041 vs. NCBI nr
Match: XP_004134104.1 (rRNA-processing protein EFG1 isoform X1 [Cucumis sativus] >KGN56919.1 hypothetical protein Csa_010348 [Cucumis sativus])

HSP 1 Score: 538 bits (1387), Expect = 3.63e-191
Identity = 309/334 (92.51%), Postives = 312/334 (93.41%), Query Frame = 0


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRLEKLQRAPSGQFQDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-G 180
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ G
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQ 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQA STSGKAASGMSSDEKNHQRQ
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQ 240

Query: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------- 300
           ISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRS        
Sbjct: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS 300

Query: 301 -------QSSNISSNSDAHKPRRKRRPKKKKQQV 317
                  QSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 334

[Close]

BLAST of IVF0002041 vs. NCBI nr
Match: XP_016899108.1 (PREDICTED: rRNA-processing protein EFG1 [Cucumis melo])

HSP 1 Score: 531 bits (1368), Expect = 2.74e-188
Identity = 310/334 (92.81%), Postives = 311/334 (93.11%), Query Frame = 0


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRLEKLQRAPSGQFQDSDVADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-G 180
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ G
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQ 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQA STSGKAASGMSSDEK   RQ
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKII-RQ 240

Query: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------- 300
           ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS        
Sbjct: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS 300

Query: 301 -------QSSNISSNSDAHKPRRKRRPKKKKQQV 317
                  QSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 333

[Close]

BLAST of IVF0002041 vs. NCBI nr
Match: XP_011650949.1 (rRNA-processing protein EFG1 isoform X2 [Cucumis sativus])

HSP 1 Score: 530 bits (1364), Expect = 1.07e-187
Identity = 307/334 (91.92%), Postives = 310/334 (92.81%), Query Frame = 0


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRLEKLQRAPSGQFQDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-G 180
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ G
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQ 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQA STSGKAASGMSSDEKNHQ  
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQ-- 240

Query: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------- 300
           ISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRS        
Sbjct: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS 300

Query: 301 -------QSSNISSNSDAHKPRRKRRPKKKKQQV 317
                  QSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 332

[Close]

BLAST of IVF0002041 vs. NCBI nr
Match: XP_038877104.1 (rRNA-processing protein efg1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 524 bits (1350), Expect = 3.45e-184
Identity = 303/334 (90.72%), Postives = 307/334 (91.92%), Query Frame = 0


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLE
Sbjct: 87  MAHGGYGKRRVNPPARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLE 146

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRLEKLQRAPSGQ QDSDVADQL
Sbjct: 147 GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDVADQL 206

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-G 180
           SKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLE+ G
Sbjct: 207 SKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLREQIKANLIAAAASGKDLEETG 266

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQ 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQA STSGKAASGMSSDE+NHQRQ
Sbjct: 267 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDERNHQRQ 326

Query: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------- 300
           ISAR LMPPPRPTKSFSSSAQA +KAGSSLRKSSTNHRAEFSTSSNTSG RS        
Sbjct: 327 ISARVLMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSSFKVRG 386

Query: 301 -------QSSNISSNSDAHKPRRKRRPKKKKQQV 317
                  QSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 387 SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 420

[Close]

BLAST of IVF0002041 vs. NCBI nr
Match: XP_038877105.1 (rRNA-processing protein efg1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 515 bits (1327), Expect = 1.01e-180
Identity = 301/334 (90.12%), Postives = 305/334 (91.32%), Query Frame = 0


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLE
Sbjct: 87  MAHGGYGKRRVNPPARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLE 146

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRLEKLQRAPSGQ QDSDVADQL
Sbjct: 147 GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDVADQL 206

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-G 180
           SKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLE+ G
Sbjct: 207 SKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLREQIKANLIAAAASGKDLEETG 266

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQ 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQA STSGKAASGMSSDE+NHQ  
Sbjct: 267 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDERNHQ-- 326

Query: 241 ISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------- 300
           ISAR LMPPPRPTKSFSSSAQA +KAGSSLRKSSTNHRAEFSTSSNTSG RS        
Sbjct: 327 ISARVLMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSSFKVRG 386

Query: 301 -------QSSNISSNSDAHKPRRKRRPKKKKQQV 317
                  QSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 387 SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 418

[Close]

BLAST of IVF0002041 vs. TAIR 10
Match: AT1G04230.1 (Protein of unknown function (DUF2361) )

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-93
Identity = 209/325 (64.31%), Postives = 251/325 (77.23%), Query Frame = 0


Query: 1   MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDA 60
           MAHGGY +RRV         +RRSKGL VEKKPK+ SLKNQIRS  RM+RK+LP EVR+A
Sbjct: 1   MAHGGYARRRVAERKTTAGTSRRSKGLRVEKKPKNSSLKNQIRSIGRMIRKDLPPEVREA 60

Query: 61  QEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQF-QD 120
            EKKL+ L+KQQ+IH RLA ERKIFLR+RK+ F  RRKIER IRRLEKL R+ SG + QD
Sbjct: 61  LEKKLDDLKKQQDIHFRLAFERKIFLRNRKVRFFERRKIERSIRRLEKLHRSTSGGYVQD 120

Query: 121 SDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASG 180
           +++  QL++LKEDLEYVRFFPK EKYV+LF+GSDD  + +RR KLR+QIKAN+I AAASG
Sbjct: 121 AEIGGQLNRLKEDLEYVRFFPKNEKYVSLFSGSDDLQVSERRSKLRKQIKANIIFAAASG 180

Query: 181 KDLED-GSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSD 240
           K+LE+ GSEDD LLD+S+DDFF+ GSSSDEADADDEWTDKST+E   S SG+A S MSSD
Sbjct: 181 KELEETGSEDDALLDLSDDDFFVNGSSSDEADADDEWTDKSTKEPVSSASGRATSSMSSD 240

Query: 241 EKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSQ 300
           E+N Q+  S R LMPPPR   + +S   +  K       S+T+HR   S+ + TS   SQ
Sbjct: 241 ERN-QKPYSTRVLMPPPRSRFASTSRQYSSVKRNEIPSSSNTSHRRSQSSHAATSSHTSQ 300

Query: 301 SSNISSNSDAHKPRRKRRPKKKKQQ 317
           SSN+SSNSDAHKP+RKRRPKKKK Q
Sbjct: 301 SSNLSSNSDAHKPKRKRRPKKKKLQ 324

[Close]

BLAST of IVF0002041 vs. TAIR 10
Match: AT5G43720.1 (Protein of unknown function (DUF2361) )

HSP 1 Score: 338.6 bits (867), Expect = 5.5e-93
Identity = 210/330 (63.64%), Postives = 257/330 (77.88%), Query Frame = 0


Query: 1   MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDA 60
           MAHGGY KRR +       ++RRSK L VEKKPK+VS+KNQ+RS ER LRK+LP EVR++
Sbjct: 1   MAHGGYAKRRDSEPKQTAGSSRRSKVLRVEKKPKTVSIKNQMRSVERFLRKDLPPEVRES 60

Query: 61  QEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEKLQRAPSGQFQDS 120
             +KLE L+KQQ+ H+RLAVERKIF R+RKI F  RRKIER IRRLEKLQR  S    D 
Sbjct: 61  LVEKLEDLKKQQDAHARLAVERKIFFRNRKIKFFERRKIERSIRRLEKLQRTSSAHVGDV 120

Query: 121 DVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGK 180
           D+A+QLSKLKEDLEYVRFFPK EKYV+LFTG++DS+++++R K+R+QIKAN+I AAASGK
Sbjct: 121 DIAEQLSKLKEDLEYVRFFPKNEKYVSLFTGAEDSEVIEKRGKMRQQIKANIIVAAASGK 180

Query: 181 DLED-GSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDE 240
           +LE+ GSEDDGLLD+S+DDFF  GSSSDEADADDE TDKS +E A S SG+A SGMSSDE
Sbjct: 181 ELEETGSEDDGLLDLSDDDFFDKGSSSDEADADDELTDKSAKEAASSASGRATSGMSSDE 240

Query: 241 KNHQRQISARALMPPPRPTKSFSSSAQAWTKAG---SSLRKSSTNHRAEFSTSSNTSGGR 300
           +N Q+Q S RALMPPP+     +S    + +     SS R +++N R+E S ++  S   
Sbjct: 241 RN-QKQNSDRALMPPPQARFESNSRKNLYVQRNEMPSSSRNNTSNRRSESSYNARASAAN 300

Query: 301 ---SQSSNISSNSDAHKPRRKRRPKKKKQQ 317
              SQSSN+SSNSDAHKP+RKRRPKKKKQQ
Sbjct: 301 SYSSQSSNLSSNSDAHKPKRKRRPKKKKQQ 329

The following BLAST results are available for this feature:

BLAST of IVF0002041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09867	8.5e-06	30.00	rRNA-processing protein efg1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
Q2UEF7	7.9e-04	28.40	rRNA-processing protein efg1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) ...	[more]

BLAST of IVF0002041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7B4	1.1e-149	92.51	rRNA-processing protein EFG1 OS=Cucumis sativus OX=3659 GN=Csa_3G143600 PE=3 SV=...	[more]
A0A1S4DT25	1.3e-147	92.81	rRNA-processing protein EFG1 OS=Cucumis melo OX=3656 GN=LOC103483652 PE=3 SV=1	[more]
A0A5A7U718	6.1e-140	94.72	rRNA-processing protein EFG1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1IBA9	6.5e-134	85.93	rRNA-processing protein EFG1 OS=Cucurbita maxima OX=3661 GN=LOC111473089 PE=3 SV...	[more]
A0A6J1G415	6.5e-134	85.93	rRNA-processing protein EFG1 OS=Cucurbita moschata OX=3662 GN=LOC111450540 PE=3 ...	[more]

BLAST of IVF0002041 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134104.1	3.63e-191	92.51	rRNA-processing protein EFG1 isoform X1 [Cucumis sativus] >KGN56919.1 hypothetic...	[more]
XP_016899108.1	2.74e-188	92.81	PREDICTED: rRNA-processing protein EFG1 [Cucumis melo]	[more]
XP_011650949.1	1.07e-187	91.92	rRNA-processing protein EFG1 isoform X2 [Cucumis sativus]	[more]
XP_038877104.1	3.45e-184	90.72	rRNA-processing protein efg1-like isoform X1 [Benincasa hispida]	[more]
XP_038877105.1	1.01e-180	90.12	rRNA-processing protein efg1-like isoform X2 [Benincasa hispida]	[more]

BLAST of IVF0002041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04230.1	1.1e-93	64.31	Protein of unknown function (DUF2361)	[more]
AT5G43720.1	5.5e-93	63.64	Protein of unknown function (DUF2361)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..234
None	No IPR available	PANTHER	PTHR33911	RRNA-PROCESSING PROTEIN EFG1	coord: 1..317
None	No IPR available	PANTHER	PTHR33911:SF2	SUBFAMILY NOT NAMED	coord: 1..317
IPR019310	rRNA-processing protein Efg1	PFAM	PF10153	Efg1	coord: 32..142 e-value: 2.1E-25 score: 89.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002041.1	IVF0002041.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030688	preribosome, small subunit precursor