Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTTTAATTCTAATTCTCCCTAAGCTTTGGCAAACAAACATGACCACCAGCTCCGGGGACGATTCGGTCCCAGTGCCCTACACTCTTCTTTCCTCAAATGCTGCGCAACAAAACGTCGTCGTTTTATCCCTCTACCGTCCCACTCCATGCCGACACCGCCGCCTTCTCCGCCTCTTTGCCTTCTACTCTGCCGCCTTCCTCCTCCTCTTCGCCGTTGCTTTTCTTCTTTTCCCCTCCGATCCCTCCCTCCAACTCGTCCGTTTGAAACTCAATCGCGTCAAAGTCCATTTGGTGCCTTTTGTTTCCCTTGACCTTTCTTTCTCTGTTTCTCTTAGGGTTCGCAATAAGAACTTCTTCTCTCTTAATTACAATTTCCTTGGCGTTTCGGTTGGCTACCGGGGAAGACGACTTGGATACGTGAGCTCCGGAGGCGGTCGAGTTTCTGCTCGAGGTTCTTCTTATGTGAATGCCACTCTCGATTTGAATGGATTGGAGGTTGTTCATGATGTCTTGTACTTGCTTGCGGATCTGGGGAAGGGTATTATTCCCTTCGATACGGAGACCGAAGTGGAAGGATCCATGGGGCTCTTCTTTATCAAAATCCCGATTAAGGTAATGTTGATTTTGTTTTTGTTTTTGACTATATGTCAAATCTTCAGTTGGAATTGTGAATTGCTTCAATGTTGATTCGTTTTGTTTCTTTGATTAGTTTGCAATCATTGATTGGGTGAACAGTAGTAGGAGCCTATTTCTTTGCAAACAGCACGATGCAAATAATGTTTATTCTCTATTACACGTTGCTTAGAGTAAAAGTTCGAATAATTGGAAAAGGACACTCAAACTTTGTGGTTGACTCTTTGGATGTCTAGTAGTGAACCCATTTCATGGTCCAGCAAGTTGCAGCACTCCTAAATCATGGCCAAAAGTACAGGCCATTTGATAACCCTTTGATTTTGGTTTTTGACCTTTTGGCTTTTGTTTGGATAAGAAATTATTTCATCCGCGAATGAAATATTTAAAGAGTAGAAAAGGGATAAACTAATAGAGATATCATGTATAAACAATACAAAGGCAGAACCCTATCTGAAAGATAAACATAGATGTGCAAAGAAGGGATAGATAAAGATATAAGACAATTTTGTGTCTTTTCACACAATTTCTTGAACACGGGTTTTTTCAACATAACAATCCAAAAGAGATTTACATAACAATCCAAAAAAGATCAGGTCTGTTTGATCCATGGAGTGGAGTTAATAAGATGAGAAGTAGAAAAAAAAAGGAAAGATGAAGTTACTCGATAAATGACATTATTATTGAAGTTGAAATGTTTACACCAAATGGTTTAATAGGAGAAAGTAATGTTTATAAACTTAATTTTAAAAATTAAACCATTTGCTGCTTCTTTGCCTTTATGCCCTTTACTGGACCATTTTTGTGCTATGCTGTTGACTGGGATAATGCTTGAAGAAGAGTAACCTTCTGGATTCTAAACTTGAACCTTGCCGTTGATTCGATTATTGGCTGCCTGTTCCTACAGTCAATATGATTATAAGAATGCCATCTTCTGCTATTGGCTTTCTTGTATAGATTTGAAATGCTTCTTTTTTTGTGGGATGTGCCATCCGAGTTAAAAAACATCCCTACTCGACCCTTTCACTGCCCTCCTTCCCGAACTGACTATTCAGCTAAATAGTTATAAACATTCACGAGGCTTTGTAAGTATTATAATCATAATGTTGTGTTAGTGGAATGTGATTTGAATTAAAAAAAGTATGTCTTCCTCATCCTCACCCGATCCTCCTGTCATTCTGTGGCCTCTTCACCAACTTTAGCATTCAGAATAAATATTTACAATGGGGTGTTCTGTTGTTTTAATGGTGTTTCTTAATGCTTGTCAGGCAAGAGTGTCATGTGAGGTACTTGTGAATACAAATAACCAAACAATTGAACATCAAGATTGCTACCCTGAGGTGAAAATTCATCACGTTGCTCACTTTTCTATTGATAATTCATATTTCTGCTTAAATTTCAACCTCACAGCCCCTTGGATCCTTTTTCTTGTATTTGCAGTGAAGGGAAGATGGAAATTGGGGGAAAGTTTTCATTATTACTTTTGTGGCATGACGTTGAAGCAGGAAAGTGGGAACTCCCCTGAATTTGGCTGTAAATATCACTTGCAGAGTGTTTAGGGCTCATTGTCATATGGTAGGAGTTGATAGAAAAAGGAAACGGTAAATATCTATGTGGATTACTATTAGAAAAAACTTCGTTTTCTCAGTTGGACACAAGTTAAAGTTCATTTATATGTAATAGTACACGTGTGGCAGTTGCTGCTATTGCAGCTATGAGGGTAAATTCTATTTTACTTTTACTCATGCCTTTATGGCCATTTACTTGGAGAGTTTCTGTATCCATGCTGGGAAGGAA
mRNA sequence
CATTTTAATTCTAATTCTCCCTAAGCTTTGGCAAACAAACATGACCACCAGCTCCGGGGACGATTCGGTCCCAGTGCCCTACACTCTTCTTTCCTCAAATGCTGCGCAACAAAACGTCGTCGTTTTATCCCTCTACCGTCCCACTCCATGCCGACACCGCCGCCTTCTCCGCCTCTTTGCCTTCTACTCTGCCGCCTTCCTCCTCCTCTTCGCCGTTGCTTTTCTTCTTTTCCCCTCCGATCCCTCCCTCCAACTCGTCCGTTTGAAACTCAATCGCGTCAAAGTCCATTTGGTGCCTTTTGTTTCCCTTGACCTTTCTTTCTCTGTTTCTCTTAGGGTTCGCAATAAGAACTTCTTCTCTCTTAATTACAATTTCCTTGGCGTTTCGGTTGGCTACCGGGGAAGACGACTTGGATACGTGAGCTCCGGAGGCGGTCGAGTTTCTGCTCGAGGTTCTTCTTATGTGAATGCCACTCTCGATTTGAATGGATTGGAGGTTGTTCATGATGTCTTGTACTTGCTTGCGGATCTGGGGAAGGGTATTATTCCCTTCGATACGGAGACCGAAGTGGAAGGATCCATGGGGCTCTTCTTTATCAAAATCCCGATTAAGGCAAGAGTGTCATGTGAGGTACTTGTGAATACAAATAACCAAACAATTGAACATCAAGATTGCTACCCTGAGTGAAGGGAAGATGGAAATTGGGGGAAAGTTTTCATTATTACTTTTGTGGCATGACGTTGAAGCAGGAAAGTGGGAACTCCCCTGAATTTGGCTGTAAATATCACTTGCAGAGTGTTTAGGGCTCATTGTCATATGGTAGGAGTTGATAGAAAAAGGAAACGGTAAATATCTATGTGGATTACTATTAGAAAAAACTTCGTTTTCTCAGTTGGACACAAGTTAAAGTTCATTTATATGTAATAGTACACGTGTGGCAGTTGCTGCTATTGCAGCTATGAGGGTAAATTCTATTTTACTTTTACTCATGCCTTTATGGCCATTTACTTGGAGAGTTTCTGTATCCATGCTGGGAAGGAA
Coding sequence (CDS)
ATGACCACCAGCTCCGGGGACGATTCGGTCCCAGTGCCCTACACTCTTCTTTCCTCAAATGCTGCGCAACAAAACGTCGTCGTTTTATCCCTCTACCGTCCCACTCCATGCCGACACCGCCGCCTTCTCCGCCTCTTTGCCTTCTACTCTGCCGCCTTCCTCCTCCTCTTCGCCGTTGCTTTTCTTCTTTTCCCCTCCGATCCCTCCCTCCAACTCGTCCGTTTGAAACTCAATCGCGTCAAAGTCCATTTGGTGCCTTTTGTTTCCCTTGACCTTTCTTTCTCTGTTTCTCTTAGGGTTCGCAATAAGAACTTCTTCTCTCTTAATTACAATTTCCTTGGCGTTTCGGTTGGCTACCGGGGAAGACGACTTGGATACGTGAGCTCCGGAGGCGGTCGAGTTTCTGCTCGAGGTTCTTCTTATGTGAATGCCACTCTCGATTTGAATGGATTGGAGGTTGTTCATGATGTCTTGTACTTGCTTGCGGATCTGGGGAAGGGTATTATTCCCTTCGATACGGAGACCGAAGTGGAAGGATCCATGGGGCTCTTCTTTATCAAAATCCCGATTAAGGCAAGAGTGTCATGTGAGGTACTTGTGAATACAAATAACCAAACAATTGAACATCAAGATTGCTACCCTGAGTGA
Protein sequence
MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVAFLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYRGRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGSMGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE
Homology
BLAST of IVF0002029 vs. ExPASy TrEMBL
Match:
A0A1S3CJK6 (uncharacterized protein LOC103501551 OS=Cucumis melo OX=3656 GN=LOC103501551 PE=4 SV=1)
HSP 1 Score: 416.4 bits (1069), Expect = 7.3e-113
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA
Sbjct: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
Query: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR
Sbjct: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
Query: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS
Sbjct: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
Query: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 216
MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE
Sbjct: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215
BLAST of IVF0002029 vs. ExPASy TrEMBL
Match:
A0A0A0LTV4 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G369500 PE=4 SV=1)
HSP 1 Score: 399.8 bits (1026), Expect = 7.1e-108
Identity = 207/215 (96.28%), Postives = 210/215 (97.67%), Query Frame = 0
Query: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
MT+SSGDDSVPVPYTL+ SNAAQQNVVVLSLYRP PCRHRRLLRL AFYSAAFLLLFAVA
Sbjct: 1 MTSSSGDDSVPVPYTLIPSNAAQQNVVVLSLYRPPPCRHRRLLRLCAFYSAAFLLLFAVA 60
Query: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
FLLFPSDPSLQLVRLKLNRVKVHLVP VSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR
Sbjct: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPVVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
Query: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
GRRLGYVSS GGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTET+VEGS
Sbjct: 121 GRRLGYVSSEGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETDVEGS 180
Query: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 216
MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE
Sbjct: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215
BLAST of IVF0002029 vs. ExPASy TrEMBL
Match:
A0A5A7TX90 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00560 PE=4 SV=1)
HSP 1 Score: 364.8 bits (935), Expect = 2.5e-97
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA
Sbjct: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
Query: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR
Sbjct: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
Query: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS
Sbjct: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
Query: 181 MGLFFIKIPIK 192
MGLFFIKIPIK
Sbjct: 181 MGLFFIKIPIK 191
BLAST of IVF0002029 vs. ExPASy TrEMBL
Match:
A0A6J1CTN0 (uncharacterized protein LOC111014473 OS=Momordica charantia OX=3673 GN=LOC111014473 PE=4 SV=1)
HSP 1 Score: 335.9 bits (860), Expect = 1.3e-88
Identity = 174/215 (80.93%), Postives = 190/215 (88.37%), Query Frame = 0
Query: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
MT+SS DDSVPVPY+LL NAA QNVVVLSLYRP R RRLLRL AFYSAAFLLL AVA
Sbjct: 1 MTSSSRDDSVPVPYSLLPPNAAHQNVVVLSLYRPPRFRRRRLLRLCAFYSAAFLLLSAVA 60
Query: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
FLLFP+DPSLQLVRLKLNR+KV L+P + LDLSFS S+RVRN NFFSL+YN+LGVSVGYR
Sbjct: 61 FLLFPADPSLQLVRLKLNRLKVRLLPVLLLDLSFSASVRVRNNNFFSLDYNYLGVSVGYR 120
Query: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
GRRLG+VSS GGRVSARG SYVNATLDLNG EV+HD +YL+ DL GI+PFDTETEVEG
Sbjct: 121 GRRLGFVSSEGGRVSARGLSYVNATLDLNGFEVIHDGIYLIEDLATGIVPFDTETEVEGY 180
Query: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 216
MGLFFIK PIKARVSCEV VNTN++TIEHQDCYPE
Sbjct: 181 MGLFFIKFPIKARVSCEVFVNTNDKTIEHQDCYPE 215
BLAST of IVF0002029 vs. ExPASy TrEMBL
Match:
A0A6J1JI07 (uncharacterized protein LOC111485280 OS=Cucurbita maxima OX=3661 GN=LOC111485280 PE=4 SV=1)
HSP 1 Score: 320.9 bits (821), Expect = 4.2e-84
Identity = 170/212 (80.19%), Postives = 185/212 (87.26%), Query Frame = 0
Query: 5 SGDDSVPVPYTLLSSN-AAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVAFLL 64
S D S+PVPY+ + N AA QNVVVLSLYRP R RRLLRL A YSAAFLLL AV FLL
Sbjct: 4 SKDGSIPVPYSPIPPNAAAPQNVVVLSLYRPPLYRQRRLLRLCALYSAAFLLLSAVVFLL 63
Query: 65 FPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYRGRR 124
FPSDPSLQLVRLKLN VKV L+P V LDLSFS S+RVRNKNFFSL+YN+LGVSVG+RGRR
Sbjct: 64 FPSDPSLQLVRLKLNGVKVRLLPAVVLDLSFSASVRVRNKNFFSLDYNYLGVSVGFRGRR 123
Query: 125 LGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGSMGL 184
LG+VSS GGRVSARGSSYVNATLDLNGL+++HDV +LL DL KGIIPFDTETEVEGSMGL
Sbjct: 124 LGFVSSDGGRVSARGSSYVNATLDLNGLQIIHDVFFLLEDLRKGIIPFDTETEVEGSMGL 183
Query: 185 FFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 216
FFIK PIKA VSCEV V+TN+QTIEHQDCYPE
Sbjct: 184 FFIKFPIKATVSCEVFVDTNSQTIEHQDCYPE 215
BLAST of IVF0002029 vs. NCBI nr
Match:
XP_008463384.1 (PREDICTED: uncharacterized protein LOC103501551 [Cucumis melo])
HSP 1 Score: 412 bits (1058), Expect = 1.09e-144
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA
Sbjct: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
Query: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR
Sbjct: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
Query: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS
Sbjct: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
Query: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215
MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE
Sbjct: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215
BLAST of IVF0002029 vs. NCBI nr
Match:
XP_004148717.1 (uncharacterized protein LOC101219269 [Cucumis sativus] >KGN65355.1 hypothetical protein Csa_019564 [Cucumis sativus])
HSP 1 Score: 395 bits (1015), Expect = 3.90e-138
Identity = 207/215 (96.28%), Postives = 210/215 (97.67%), Query Frame = 0
Query: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
MT+SSGDDSVPVPYTL+ SNAAQQNVVVLSLYRP PCRHRRLLRL AFYSAAFLLLFAVA
Sbjct: 1 MTSSSGDDSVPVPYTLIPSNAAQQNVVVLSLYRPPPCRHRRLLRLCAFYSAAFLLLFAVA 60
Query: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
FLLFPSDPSLQLVRLKLNRVKVHLVP VSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR
Sbjct: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPVVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
Query: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
GRRLGYVSS GGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTET+VEGS
Sbjct: 121 GRRLGYVSSEGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETDVEGS 180
Query: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215
MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE
Sbjct: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215
BLAST of IVF0002029 vs. NCBI nr
Match:
KAA0046596.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family isoform 1 [Cucumis melo var. makuwa] >TYK00100.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family isoform 1 [Cucumis melo var. makuwa])
HSP 1 Score: 361 bits (926), Expect = 1.83e-124
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA
Sbjct: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
Query: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR
Sbjct: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
Query: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS
Sbjct: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
Query: 181 MGLFFIKIPIK 191
MGLFFIKIPIK
Sbjct: 181 MGLFFIKIPIK 191
BLAST of IVF0002029 vs. NCBI nr
Match:
XP_038878687.1 (uncharacterized protein LOC120070868 [Benincasa hispida])
HSP 1 Score: 350 bits (899), Expect = 7.05e-120
Identity = 189/217 (87.10%), Postives = 199/217 (91.71%), Query Frame = 0
Query: 1 MTTSS-GDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAV 60
MT+SS DDSVPVPYTLL NAAQQNVVVLSLYR PC+H RLLRL A YSAAFLLLFAV
Sbjct: 37 MTSSSRDDDSVPVPYTLLPQNAAQQNVVVLSLYRRPPCQHWRLLRLCALYSAAFLLLFAV 96
Query: 61 AFLLFPSDPSLQLVRLKLNRVKVHLVP-FVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVG 120
AFLLFP+DPS QLVRLKLN VKVHLVP VSLDLSF SLRVRNKNFFSL+Y+++GVSVG
Sbjct: 97 AFLLFPADPSFQLVRLKLNHVKVHLVPPGVSLDLSFFASLRVRNKNFFSLHYDYIGVSVG 156
Query: 121 YRGRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVE 180
YRG+RLG+VSS GGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVE
Sbjct: 157 YRGKRLGFVSSEGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVE 216
Query: 181 GSMGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215
GSMGLFFIK PIKA+VSCEVLVN NNQTIEHQDCYPE
Sbjct: 217 GSMGLFFIKFPIKAKVSCEVLVNPNNQTIEHQDCYPE 253
BLAST of IVF0002029 vs. NCBI nr
Match:
XP_022144909.1 (uncharacterized protein LOC111014473 [Momordica charantia])
HSP 1 Score: 331 bits (849), Expect = 7.68e-113
Identity = 174/215 (80.93%), Postives = 190/215 (88.37%), Query Frame = 0
Query: 1 MTTSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFAVA 60
MT+SS DDSVPVPY+LL NAA QNVVVLSLYRP R RRLLRL AFYSAAFLLL AVA
Sbjct: 1 MTSSSRDDSVPVPYSLLPPNAAHQNVVVLSLYRPPRFRRRRLLRLCAFYSAAFLLLSAVA 60
Query: 61 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120
FLLFP+DPSLQLVRLKLNR+KV L+P + LDLSFS S+RVRN NFFSL+YN+LGVSVGYR
Sbjct: 61 FLLFPADPSLQLVRLKLNRLKVRLLPVLLLDLSFSASVRVRNNNFFSLDYNYLGVSVGYR 120
Query: 121 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 180
GRRLG+VSS GGRVSARG SYVNATLDLNG EV+HD +YL+ DL GI+PFDTETEVEG
Sbjct: 121 GRRLGFVSSEGGRVSARGLSYVNATLDLNGFEVIHDGIYLIEDLATGIVPFDTETEVEGY 180
Query: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215
MGLFFIK PIKARVSCEV VNTN++TIEHQDCYPE
Sbjct: 181 MGLFFIKFPIKARVSCEVFVNTNDKTIEHQDCYPE 215
BLAST of IVF0002029 vs. TAIR 10
Match:
AT4G13270.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )
HSP 1 Score: 208.8 bits (530), Expect = 4.5e-54
Identity = 110/215 (51.16%), Postives = 151/215 (70.23%), Query Frame = 0
Query: 4 SSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHR-----RLLRLFAFYSAAFLLLFA 63
SS + +PYT L S+ Q+V++L+ YR RHR R LR ++A LLL A
Sbjct: 3 SSKHEDYGIPYTPLPSSQPSQSVILLTPYR----RHRRPSLLRNLRCSLLFTAVILLLSA 62
Query: 64 VAFLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVG 123
+LL+PSDP + + R+ LN + V ++LDLSFS++++VRN++FFSL+Y+ L VS+G
Sbjct: 63 AVYLLYPSDPDITVSRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIG 122
Query: 124 YRGRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVE 183
YRGR LG V S GG + AR SSY++ATL+L+GLEVVHDV+YL+ DL KG+IPFDT +V+
Sbjct: 123 YRGRELGLVKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQ 182
Query: 184 GSMGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCY 214
G +G+ IPI+ +VSCEV VN NNQ I HQDC+
Sbjct: 183 GDLGVLLFNIPIQGKVSCEVYVNVNNQKISHQDCH 213
BLAST of IVF0002029 vs. TAIR 10
Match:
AT1G52330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )
HSP 1 Score: 159.1 bits (401), Expect = 4.1e-39
Identity = 88/214 (41.12%), Postives = 137/214 (64.02%), Query Frame = 0
Query: 3 TSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFA--VA 62
T S D P+P SS++ + N VL P+P RR F + FL+ FA +
Sbjct: 10 TPSLPDYKPLP----SSSSHELNDAVLISSHPSPPSRRR------FIISIFLISFASILI 69
Query: 63 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 122
++ +PSDP ++++R+K++ V VH P S+D++ V+L+V N + +S ++ L V++ YR
Sbjct: 70 YIFWPSDPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYR 129
Query: 123 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 182
G+ LG+VSS GG V+A GSSY++A +L+G+ V DV++L+ DL KG + FDT TE G
Sbjct: 130 GKTLGHVSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGK 189
Query: 183 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYP 215
+G+ F + P+KA+V+C +LV+T NQTI Q C P
Sbjct: 190 LGVLFFRFPLKAKVACGILVDTVNQTISRQSCSP 213
BLAST of IVF0002029 vs. TAIR 10
Match:
AT1G52330.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )
HSP 1 Score: 132.9 bits (333), Expect = 3.1e-31
Identity = 76/193 (39.38%), Postives = 121/193 (62.69%), Query Frame = 0
Query: 3 TSSGDDSVPVPYTLLSSNAAQQNVVVLSLYRPTPCRHRRLLRLFAFYSAAFLLLFA--VA 62
T S D P+P SS++ + N VL P+P RR F + FL+ FA +
Sbjct: 10 TPSLPDYKPLP----SSSSHELNDAVLISSHPSPPSRRR------FIISIFLISFASILI 69
Query: 63 FLLFPSDPSLQLVRLKLNRVKVHLVPFVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 122
++ +PSDP ++++R+K++ V VH P S+D++ V+L+V N + +S ++ L V++ YR
Sbjct: 70 YIFWPSDPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYR 129
Query: 123 GRRLGYVSSGGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETEVEGS 182
G+ LG+VSS GG V+A GSSY++A +L+G+ V DV++L+ DL KG + FDT TE G
Sbjct: 130 GKTLGHVSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGK 189
Query: 183 MGLFFIKIPIKAR 194
+G+ F + P+K R
Sbjct: 190 LGVLFFRFPLKVR 192
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CJK6 | 7.3e-113 | 100.00 | uncharacterized protein LOC103501551 OS=Cucumis melo OX=3656 GN=LOC103501551 PE=... | [more] |
A0A0A0LTV4 | 7.1e-108 | 96.28 | LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G369500 PE=4 ... | [more] |
A0A5A7TX90 | 2.5e-97 | 100.00 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family isofor... | [more] |
A0A6J1CTN0 | 1.3e-88 | 80.93 | uncharacterized protein LOC111014473 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
A0A6J1JI07 | 4.2e-84 | 80.19 | uncharacterized protein LOC111485280 OS=Cucurbita maxima OX=3661 GN=LOC111485280... | [more] |
Match Name | E-value | Identity | Description | |
XP_008463384.1 | 1.09e-144 | 100.00 | PREDICTED: uncharacterized protein LOC103501551 [Cucumis melo] | [more] |
XP_004148717.1 | 3.90e-138 | 96.28 | uncharacterized protein LOC101219269 [Cucumis sativus] >KGN65355.1 hypothetical ... | [more] |
KAA0046596.1 | 1.83e-124 | 100.00 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family isofor... | [more] |
XP_038878687.1 | 7.05e-120 | 87.10 | uncharacterized protein LOC120070868 [Benincasa hispida] | [more] |
XP_022144909.1 | 7.68e-113 | 80.93 | uncharacterized protein LOC111014473 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
AT4G13270.1 | 4.5e-54 | 51.16 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | [more] |
AT1G52330.1 | 4.1e-39 | 41.12 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | [more] |
AT1G52330.2 | 3.1e-31 | 39.38 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | [more] |