IVF0002028 (gene) Melon (IVF77) v1

Overview


Name	IVF0002028
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Methyltransferase type 11
Location	chr03: 12997174 .. 12997521 (-)
RNA-Seq Expression	IVF0002028
Synteny	IVF0002028

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGTCTCATATGGGAGTTCACGATGTCACCGGTGTCGAGTTGATTGATTCGCCTCCTTTGGTGAGTCGTGCTGATCCTCATAATTTGCCTTTCTTTGATCATGTTTTTGATTTGGCGTTTACTGCTCATTTGGCTGAGGCGTTGTTTCCATCTCAATTTGTTTCTGAGATGGAGAGAGCTGTTCGTCCTAATGGTGTTTGTGTGATTGTTGTTGAGGAATGTGGGGATTATGAAGTTAAGGAGATTGTAGGGTTGTTTATGAAATCACGATTTGTAAATTCGATCAATGTTACGTTAACAGGATTGAAAATGACTCGGATTTTAATGAAAAGAACTTCTTGA

mRNA sequence

ATGGCGTTGTCTCATATGGGAGTTCACGATGTCACCGGTGTCGAGTTGATTGATTCGCCTCCTTTGGTGAGTCGTGCTGATCCTCATAATTTGCCTTTCTTTGATCATGTTTTTGATTTGGCGTTTACTGCTCATTTGGCTGAGGCGTTGTTTCCATCTCAATTTGTTTCTGAGATGGAGAGAGCTGTTCGTCCTAATGGTGTTTGTGTGATTGTTGTTGAGGAATGTGGGGATTATGAAGTTAAGGAGATTGTAGGGTTGTTTATGAAATCACGATTTGTAAATTCGATCAATGTTACGTTAACAGGATTGAAAATGACTCGGATTTTAATGAAAAGAACTTCTTGA

Coding sequence (CDS)

ATGGCGTTGTCTCATATGGGAGTTCACGATGTCACCGGTGTCGAGTTGATTGATTCGCCTCCTTTGGTGAGTCGTGCTGATCCTCATAATTTGCCTTTCTTTGATCATGTTTTTGATTTGGCGTTTACTGCTCATTTGGCTGAGGCGTTGTTTCCATCTCAATTTGTTTCTGAGATGGAGAGAGCTGTTCGTCCTAATGGTGTTTGTGTGATTGTTGTTGAGGAATGTGGGGATTATGAAGTTAAGGAGATTGTAGGGTTGTTTATGAAATCACGATTTGTAAATTCGATCAATGTTACGTTAACAGGATTGAAAATGACTCGGATTTTAATGAAAAGAACTTCTTGA

Protein sequence

MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEMERAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS

Homology

[Close]

BLAST of IVF0002028 vs. ExPASy TrEMBL
Match: A0A5A7V6H8 (Methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00280 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.3e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME
Sbjct: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 116
           RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS
Sbjct: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 115

[Close]

BLAST of IVF0002028 vs. ExPASy TrEMBL
Match: E5GC82 (Methyltransferase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.3e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME
Sbjct: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 116
           RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS
Sbjct: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 115

[Close]

BLAST of IVF0002028 vs. ExPASy TrEMBL
Match: A0A5D3C9R2 (Methyltransferase type 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003870 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.8e-57
Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPS+FVSEME
Sbjct: 114 MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSRFVSEME 173

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 116
           RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS
Sbjct: 174 RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 228

[Close]

BLAST of IVF0002028 vs. ExPASy TrEMBL
Match: A0A5A7T1A8 (Methyltransferase type 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002240 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.7e-56
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALSHMGVHDVTGVELID PPLVSRADPHN+PFFDHVFDLAFTAHLAEALFPS+FVSEME
Sbjct: 114 MALSHMGVHDVTGVELIDLPPLVSRADPHNMPFFDHVFDLAFTAHLAEALFPSRFVSEME 173

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 116
           RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS
Sbjct: 174 RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 228

[Close]

BLAST of IVF0002028 vs. ExPASy TrEMBL
Match: A0A0A0K6X5 (Methyltransf_11 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G045500 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.2e-55
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALS MGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPS+FVSEME
Sbjct: 114 MALSQMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSRFVSEME 173

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 116
           RAVRP+GVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS
Sbjct: 174 RAVRPDGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 228

[Close]

BLAST of IVF0002028 vs. NCBI nr
Match: ADN34081.1 (methyltransferase [Cucumis melo subsp. melo] >KAA0063902.1 methyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (582), Expect = 2.22e-75
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME
Sbjct: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 115
           RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS
Sbjct: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 115

[Close]

BLAST of IVF0002028 vs. NCBI nr
Match: KAA0031617.1 (Methyltransferase type 11 [Cucumis melo var. makuwa] >TYK07069.1 Methyltransferase type 11 [Cucumis melo var. makuwa])

HSP 1 Score: 227 bits (578), Expect = 3.76e-73
Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPS+FVSEME
Sbjct: 114 MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSRFVSEME 173

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 115
           RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS
Sbjct: 174 RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 228

[Close]

BLAST of IVF0002028 vs. NCBI nr
Match: KAA0035139.1 (Methyltransferase type 11 [Cucumis melo var. makuwa])

HSP 1 Score: 224 bits (570), Expect = 6.18e-72
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALSHMGVHDVTGVELID PPLVSRADPHN+PFFDHVFDLAFTAHLAEALFPS+FVSEME
Sbjct: 114 MALSHMGVHDVTGVELIDLPPLVSRADPHNMPFFDHVFDLAFTAHLAEALFPSRFVSEME 173

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 115
           RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS
Sbjct: 174 RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 228

[Close]

BLAST of IVF0002028 vs. NCBI nr
Match: XP_004144574.1 (uncharacterized protein LOC101220368 [Cucumis sativus] >KGN43561.1 hypothetical protein Csa_020524 [Cucumis sativus])

HSP 1 Score: 222 bits (565), Expect = 3.56e-71
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALS MGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPS+FVSEME
Sbjct: 114 MALSQMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSRFVSEME 173

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 115
           RAVRP+GVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS
Sbjct: 174 RAVRPDGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 228

[Close]

BLAST of IVF0002028 vs. NCBI nr
Match: KAA0045910.1 (Methyltransferase type 11 [Cucumis melo var. makuwa] >TYK13679.1 Methyltransferase type 11 [Cucumis melo var. makuwa])

HSP 1 Score: 221 bits (562), Expect = 1.02e-70
Identity = 111/115 (96.52%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALSHMGVHDVTGVELIDSPPLVS  DPHNLPFFDHVFDLAFTAHLAEALFPS+FVSEME
Sbjct: 114 MALSHMGVHDVTGVELIDSPPLVSCVDPHNLPFFDHVFDLAFTAHLAEALFPSRFVSEME 173

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 115
           R VRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS
Sbjct: 174 RVVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 228

[Close]

BLAST of IVF0002028 vs. TAIR 10
Match: AT2G16030.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 2.5e-35
Identity = 74/112 (66.07%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALS +G+ DVT VEL+DS PLV RADPHNLPFFD VFD AFTAHLAEALFP QFV EME
Sbjct: 114 MALSQIGLSDVTAVELVDSIPLVKRADPHNLPFFDGVFDFAFTAHLAEALFPWQFVEEME 173

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMK 113
           R VR  G CV+ V+ECG  +V++I  LF  S+ V+  NVTL G K T IL K
Sbjct: 174 RTVRRGGFCVVSVDECGGDDVRDIARLFHNSKVVDVANVTLEGSKKTSILFK 225

[Close]

BLAST of IVF0002028 vs. TAIR 10
Match: AT4G26730.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 3.0e-33
Identity = 69/112 (61.61%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 1   MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEME 60
           MALS +G+ DVT VEL+DS PLV RADPHNLPFFD VFD  FTAHLAEALFP +FV EME
Sbjct: 79  MALSQIGLSDVTAVELVDSIPLVKRADPHNLPFFDRVFDFVFTAHLAEALFPWRFVEEME 138

Query: 61  RAVRPNGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMK 113
           R VR  G CV+ V+EC   +V++I   F  S+ V+  NVTL  +K T IL K
Sbjct: 139 RTVRRGGFCVVAVDECSGDDVRDIARFFHNSKIVDVANVTLERVKRTSILFK 190

[Close]

BLAST of IVF0002028 vs. TAIR 10
Match: AT1G24480.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 8.3e-15
Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 2   ALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEMER 61
           AL  +GV+D  G++L+  PPLV + D H+ PF D  FD  F+     AL+P +FV E+ER
Sbjct: 110 ALKRVGVNDSVGMDLVPYPPLVVKGDFHHQPFDDETFDFEFSNVFDHALYPDKFVGEIER 169

Query: 62  AVRPNGVCVIVVE--------ECGD-YEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMK 114
            +RP G+CV+ V            D + V+ +V LF +S  V+  NV   GL    +  K
Sbjct: 170 TLRPGGLCVLHVALSTRSDKYSANDLFSVEALVKLFRQSEVVHVRNVDGFGLDTEVVFRK 229

[Close]

BLAST of IVF0002028 vs. TAIR 10
Match: AT4G24805.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 5.4e-14
Identity = 43/120 (35.83%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 2   ALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSQFVSEMER 61
           AL  +GV D  G++L+  PPLV + D H  PF +  FD  F+     AL+P +FV E+ER
Sbjct: 125 ALRLIGVEDSVGIDLVPRPPLVVKGDFHAQPFDEETFDFEFSNVFDHALYPEKFVGEIER 184

Query: 62  AVRPNGVCVIVVEECGDYE---------VKEIVGLFMKSRFVNSINVTLTGLKMTRILMK 113
            ++P GVCV+ V   G  +         VK +V LF +S+ V    +   GL    +  K
Sbjct: 185 TLKPGGVCVLHVSISGKTDKYSANDLLSVKPLVKLFKRSKVVEMRKIDGFGLDTEIVFRK 244

The following BLAST results are available for this feature:

BLAST of IVF0002028 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0002028 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6H8	2.3e-57	100.00	Methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00...	[more]
E5GC82	2.3e-57	100.00	Methyltransferase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3C9R2	6.8e-57	99.13	Methyltransferase type 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7T1A8	5.7e-56	97.39	Methyltransferase type 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0K6X5	2.2e-55	97.39	Methyltransf_11 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G04...	[more]

BLAST of IVF0002028 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34081.1	2.22e-75	100.00	methyltransferase [Cucumis melo subsp. melo] >KAA0063902.1 methyltransferase [Cu...	[more]
KAA0031617.1	3.76e-73	99.13	Methyltransferase type 11 [Cucumis melo var. makuwa] >TYK07069.1 Methyltransfera...	[more]
KAA0035139.1	6.18e-72	97.39	Methyltransferase type 11 [Cucumis melo var. makuwa]	[more]
XP_004144574.1	3.56e-71	97.39	uncharacterized protein LOC101220368 [Cucumis sativus] >KGN43561.1 hypothetical ...	[more]
KAA0045910.1	1.02e-70	96.52	Methyltransferase type 11 [Cucumis melo var. makuwa] >TYK13679.1 Methyltransfera...	[more]

BLAST of IVF0002028 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16030.1	2.5e-35	66.07	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT4G26730.1	3.0e-33	61.61	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT1G24480.1	8.3e-15	37.19	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT4G24805.1	5.4e-14	35.83	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 3..108 e-value: 1.2E-7 score: 33.4
None	No IPR available	PANTHER	PTHR45085	F21J9.14	coord: 1..114
None	No IPR available	PANTHER	PTHR45085:SF3	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN	coord: 1..114
IPR013216	Methyltransferase type 11	PFAM	PF08241	Methyltransf_11	coord: 24..71 e-value: 2.8E-6 score: 27.9
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 3..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002028.1	IVF0002028.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity