IVF0002023 (gene) Melon (IVF77) v1

Overview


Name	IVF0002023
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	transcription factor IBH1-like 1
Location	chr02: 11488944 .. 11489940 (-)
RNA-Seq Expression	IVF0002023
Synteny	IVF0002023

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATAAACTCTCTTGGATCTCTATATCTTCTCCTTCTCTCTCAATTTTAACACTTTAACACATTTCTCAGGTATGTTCTATTTCTTTTCTCTCATTTTTTTCATCAAATAATTCCATAGTTCTTTCTTCTTCTTCTTCTTCTTTTTCTCTTATTTTTCTGTACAAGCCATTGAATTCTCTATTTGTTTAATTTTGTTCTTATATTATTATGATATCATCAGAATGCAGAATCCCAATTCGTTAAAACAAGAATTTTTGAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACCGAGCGGAAAACCGCCATTAAATTATCTGCTGACATAGCTTTAGCATCTTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATCGCCCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACGGCGTACTGGGTCGTGGCCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGCCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAGAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGCTGATTGAAGAAACCCTAGATTATATGTCGGCTCTTCAAGCTCAAGTTGATGTAATGAGATTTCTTGCATCTGCATATAATCCATCATCATCGTCATGAAAAAAGAAAAAAAATTCAATTTTTAATTATAATCAATCCCCCTTTTTTTGTTTATTTATTTTCTTTTTTGGCCAACATTCATATGATGAATGTGGATGGAGAAAGTTATGGGCTTTTTTTCTCTCTTTTTGCACATATATGTGTAGCTAATTTAATTTGAAGTTAATGTAGTGATAATTTGAAAACATTATCTGAGTTTTATGTACATAATATATA

mRNA sequence

CTTATAAACTCTCTTGGATCTCTATATCTTCTCCTTCTCTCTCAATTTTAACACTTTAACACATTTCTCAGAATGCAGAATCCCAATTCGTTAAAACAAGAATTTTTGAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACCGAGCGGAAAACCGCCATTAAATTATCTGCTGACATAGCTTTAGCATCTTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATCGCCCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACGGCGTACTGGGTCGTGGCCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGCCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAGAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGCTGATTGAAGAAACCCTAGATTATATGTCGGCTCTTCAAGCTCAAGTTGATGTAATGAGATTTCTTGCATCTGCATATAATCCATCATCATCGTCATGAAAAAAGAAAAAAAATTCAATTTTTAATTATAATCAATCCCCCTTTTTTTGTTTATTTATTTTCTTTTTTGGCCAACATTCATATGATGAATGTGGATGGAGAAAGTTATGGGCTTTTTTTCTCTCTTTTTGCACATATATGTGTAGCTAATTTAATTTGAAGTTAATGTAGTGATAATTTGAAAACATTATCTGAGTTTTATGTACATAATATATA

Coding sequence (CDS)

ATGCAGAATCCCAATTCGTTAAAACAAGAATTTTTGAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACCGAGCGGAAAACCGCCATTAAATTATCTGCTGACATAGCTTTAGCATCTTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATCGCCCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACGGCGTACTGGGTCGTGGCCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGCCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAGAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGCTGATTGAAGAAACCCTAGATTATATGTCGGCTCTTCAAGCTCAAGTTGATGTAATGAGATTTCTTGCATCTGCATATAATCCATCATCATCGTCATGA

Protein sequence

MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS

Homology

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BLAST of IVF0002023 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.1e-27
Identity = 78/179 (43.58%), Postives = 121/179 (67.60%), Query Frame = 0


Query: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQ  +S+ +EFLKKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           I +++ ++ + LV   + G     + + + N K+ + +    KIV+RS+++ RR+ +   
Sbjct: 61  IEKTATED-NFLVRQMLSG----IKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSAS 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLASA 179
             AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Sbjct: 121 EEAAAK-AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

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BLAST of IVF0002023 vs. ExPASy Swiss-Prot
Match: Q9SKX1 (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.1e-04
Identity = 35/94 (37.23%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 90  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGE 149
           S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG 
Sbjct: 68  SRALLRRADKDDNKIVRFSRRKWKISSKRRRSNQRAPV------VEEAAERLRNLVPGGG 127

Query: 150 FMDEISLIEETLDYMSALQAQVDVMRFLASAYNP 182
            M+   L+EET  Y+  L  QV VM+ L    +P
Sbjct: 128 GMETSKLMEETAHYIKCLSMQVKVMQCLVDGLSP 155

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BLAST of IVF0002023 vs. ExPASy TrEMBL
Match: A0A1S3B8V1 (uncharacterized protein LOC103487305 OS=Cucumis melo OX=3656 GN=LOC103487305 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.1e-92
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQNPNSLKQEFLKKWMMGLQIYTTTNENMTV ERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVAERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180
           CMAAVTIARRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN
Sbjct: 121 CMAAVTIARRLVQRRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180

Query: 181 PSSSS 186
           PSSSS
Sbjct: 181 PSSSS 185

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BLAST of IVF0002023 vs. ExPASy TrEMBL
Match: A0A0A0LWQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G294080 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQN NSLKQEF KKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180
           CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYN
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

Query: 181 PSSSS 186
           PSSSS
Sbjct: 181 PSSSS 185

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BLAST of IVF0002023 vs. ExPASy TrEMBL
Match: A0A5D3BAB1 (Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00110 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.0e-75
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 29  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 88
           MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ
Sbjct: 1   MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 60

Query: 89  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 148
           ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF
Sbjct: 61  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 120

Query: 149 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 186
           MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS
Sbjct: 121 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 157

[Close]

BLAST of IVF0002023 vs. ExPASy TrEMBL
Match: A0A5A7SVT7 (Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002130 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.9e-75
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 29  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 88
           MTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ
Sbjct: 1   MTVAERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 60

Query: 89  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 148
           ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQ+RTKVLRGLVPGGEF
Sbjct: 61  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQRRTKVLRGLVPGGEF 120

Query: 149 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 186
           MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS
Sbjct: 121 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 157

[Close]

BLAST of IVF0002023 vs. ExPASy TrEMBL
Match: A0A6J1JMR3 (transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111485792 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.9e-61
Identity = 136/177 (76.84%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+NP+SLK++FLKKW+MGLQIYTTTN NMTV +RK AIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MRNPSSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IA +SV + S LVANG+LGR +CER+KQ S+ KITRSSWSSGKI+KRSRRV RR++ R  
Sbjct: 61  IAGTSVHDGSFLVANGLLGRAVCERIKQ-SSSKITRSSWSSGKILKRSRRVGRRKKCRKP 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLAS 178
             AA  IARRLVQKRT+ LRGLVPGGEFMDE+SLIEETLDY+ ALQ QVDVMR LA+
Sbjct: 121 --AAEWIARRLVQKRTRTLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLAT 174

[Close]

BLAST of IVF0002023 vs. NCBI nr
Match: XP_008443801.1 (PREDICTED: uncharacterized protein LOC103487305 [Cucumis melo])

HSP 1 Score: 348 bits (893), Expect = 1.58e-120
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQNPNSLKQEFLKKWMMGLQIYTTTNENMTV ERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVAERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180
           CMAAVTIARRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN
Sbjct: 121 CMAAVTIARRLVQRRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180

Query: 181 PSSSS 185
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of IVF0002023 vs. NCBI nr
Match: XP_004149880.1 (transcription factor IBH1-like 1 [Cucumis sativus] >KGN65277.1 hypothetical protein Csa_020046 [Cucumis sativus])

HSP 1 Score: 344 bits (882), Expect = 7.53e-119
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQN NSLKQEF KKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180
           CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYN
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

Query: 181 PSSSS 185
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of IVF0002023 vs. NCBI nr
Match: TYJ95949.1 (transcription factor IBH1-like [Cucumis melo var. makuwa])

HSP 1 Score: 293 bits (749), Expect = 5.34e-99
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 29  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 88
           MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ
Sbjct: 1   MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 60

Query: 89  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 148
           ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF
Sbjct: 61  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 120

Query: 149 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 185
           MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS
Sbjct: 121 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 157

[Close]

BLAST of IVF0002023 vs. NCBI nr
Match: KAA0035130.1 (transcription factor IBH1-like [Cucumis melo var. makuwa])

HSP 1 Score: 290 bits (741), Expect = 8.85e-98
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 29  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 88
           MTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ
Sbjct: 1   MTVAERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 60

Query: 89  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 148
           ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQ+RTKVLRGLVPGGEF
Sbjct: 61  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQRRTKVLRGLVPGGEF 120

Query: 149 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 185
           MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS
Sbjct: 121 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 157

[Close]

BLAST of IVF0002023 vs. NCBI nr
Match: XP_038879866.1 (transcription factor IBH1-like 1 [Benincasa hispida])

HSP 1 Score: 282 bits (721), Expect = 2.86e-94
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MQNPNSLKQEFLKKWMMGLQIYTTT-NENMTVTERKTAIKLSADIALASSRNCATRWSRA 60
           M+NP+SLK+EFLKKWM GLQIYTT+ NENMTV ERKTAIKLSADIALASSRNCATRWSRA
Sbjct: 1   MRNPSSLKREFLKKWMTGLQIYTTSSNENMTVIERKTAIKLSADIALASSRNCATRWSRA 60

Query: 61  VIARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRN 120
           VIA SSVDNRS  VA+GVLGR +CERVKQISN K+TRSSWSSG I+KRSRRV   RRRRN
Sbjct: 61  VIASSSVDNRSRRVADGVLGRAVCERVKQISNSKMTRSSWSSGMILKRSRRV---RRRRN 120

Query: 121 KCM---AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA 180
           KCM   AA ++A+RLV KRTKVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMR LA
Sbjct: 121 KCMKAMAAESVAKRLVLKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLA 180

Query: 181 SAYNPSSSS 185
           +AYNPSSSS
Sbjct: 181 TAYNPSSSS 186

[Close]

BLAST of IVF0002023 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-28
Identity = 78/179 (43.58%), Postives = 121/179 (67.60%), Query Frame = 0


Query: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQ  +S+ +EFLKKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           I +++ ++ + LV   + G     + + + N K+ + +    KIV+RS+++ RR+ +   
Sbjct: 61  IEKTATED-NFLVRQMLSG----IKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSAS 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLASA 179
             AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Sbjct: 121 EEAAAK-AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of IVF0002023 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-28
Identity = 78/179 (43.58%), Postives = 121/179 (67.60%), Query Frame = 0


Query: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQ  +S+ +EFLKKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           I +++ ++ + LV   + G     + + + N K+ + +    KIV+RS+++ RR+ +   
Sbjct: 61  IEKTATED-NFLVRQMLSG----IKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSAS 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLASA 179
             AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Sbjct: 121 EEAAAK-AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

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BLAST of IVF0002023 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-19
Identity = 74/182 (40.66%), Postives = 108/182 (59.34%), Query Frame = 0


Query: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNEN-MTVTERKTAIKLSADIALASSRNCATRWSRA 60
           M   N +KQEF+KKW+  L +  ++ E+ + VTERK AI+LS+D+A+A++RN +T WSRA
Sbjct: 2   MNTYNMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRA 61

Query: 61  VIARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRR---R 120
           +I+RS   N++   AN  + R                      +I+K++R   + R    
Sbjct: 62  LISRSG--NKT---ANKPMAR----------------------RILKKARNRMKNRCNIL 121

Query: 121 RRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEIS-LIEETLDYMSALQAQVDVMRFL 178
           RRN    A T     V+KRT +L+ LVPGGE +D+   LI ETLDY+  L+AQVDVMR +
Sbjct: 122 RRNGNFTAKT----WVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTV 152

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BLAST of IVF0002023 vs. TAIR 10
Match: AT2G43060.1 (ILI1 binding bHLH 1 )

HSP 1 Score: 47.4 bits (111), Expect = 1.5e-05
Identity = 35/94 (37.23%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 90  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGE 149
           S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG 
Sbjct: 68  SRALLRRADKDDNKIVRFSRRKWKISSKRRRSNQRAPV------VEEAAERLRNLVPGGG 127

Query: 150 FMDEISLIEETLDYMSALQAQVDVMRFLASAYNP 182
            M+   L+EET  Y+  L  QV VM+ L    +P
Sbjct: 128 GMETSKLMEETAHYIKCLSMQVKVMQCLVDGLSP 155

The following BLAST results are available for this feature:

BLAST of IVF0002023 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0B9	5.1e-27	43.58	Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV...	[more]
Q9SKX1	2.1e-04	37.23	Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1	[more]

BLAST of IVF0002023 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8V1	6.1e-92	98.92	uncharacterized protein LOC103487305 OS=Cucumis melo OX=3656 GN=LOC103487305 PE=...	[more]
A0A0A0LWQ3	1.2e-90	97.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G294080 PE=4 SV=1	[more]
A0A5D3BAB1	1.0e-75	100.00	Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7SVT7	8.9e-75	98.73	Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1JMR3	1.9e-61	76.84	transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111485792 PE=...	[more]

BLAST of IVF0002023 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443801.1	1.58e-120	98.92	PREDICTED: uncharacterized protein LOC103487305 [Cucumis melo]	[more]
XP_004149880.1	7.53e-119	97.84	transcription factor IBH1-like 1 [Cucumis sativus] >KGN65277.1 hypothetical prot...	[more]
TYJ95949.1	5.34e-99	100.00	transcription factor IBH1-like [Cucumis melo var. makuwa]	[more]
KAA0035130.1	8.85e-98	98.73	transcription factor IBH1-like [Cucumis melo var. makuwa]	[more]
XP_038879866.1	2.86e-94	83.60	transcription factor IBH1-like 1 [Benincasa hispida]	[more]

BLAST of IVF0002023 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30410.2	3.6e-28	43.58	sequence-specific DNA binding transcription factors	[more]
AT4G30410.1	3.6e-28	43.58	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	3.1e-19	40.66	EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arab...	[more]
AT2G43060.1	1.5e-05	37.23	ILI1 binding bHLH 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124:SF5	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..178
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..178
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 130..176 e-value: 1.71341E-11 score: 54.936

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002023.1	IVF0002023.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding