IVF0002015 (gene) Melon (IVF77) v1

Overview
NameIVF0002015
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein-serine/threonine phosphatase
Locationchr06: 20343688 .. 20344137 (-)
RNA-Seq ExpressionIVF0002015
SyntenyIVF0002015
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTGGACGCGGCGCGGCTGCACGCGGAGAGGGCTGGCCGACGCGGTTTCGGCTTCGGCTTCGGGCGCGCGGACGTGGAGCGGCTCCGGGTTCGGGTTCGTCGGCTGGAGGCACGCGCGGCGGATCGGCTTCGGGTGGCGGCTGCGGGAGACGGCTGTGCGCGGATGCCCGGCGTGCGCGGATCTAAGCGGCTCCCTTCGGCTTGATCGGAGCGGCGCGACGCGGCTCGGCTGTCCTCCTCAGATCGAAGCGGCGCGGCGAGTTCCGGTTTCGGCTGGCTCGGCGAGTTCCAGCTTCGACTGTCTCGGCGAGTTCCGGCTTCGGCTTGCAGACGCGCGACTGATCGGCTTCGGCTGTCTCGGCGAGTTCCGGCTTCGGCTTGCAGACGCGGCGCGGCTGGGAGGGTGGTTCGGCTCTACTGCGGCCGGCTCCGACGCTTGTGCTTGA

mRNA sequence

ATGGGCTGGACGCGGCGCGGCTGCACGCGGAGAGGGCTGGCCGACGCGGTTTCGGCTTCGGCTTCGGGCGCGCGGACGTGGAGCGGCTCCGGGTTCGGGTTCGTCGGCTGGAGGCACGCGCGGCGGATCGGCTTCGGGTGGCGGCTGCGGGAGACGGCTGTGCGCGGATGCCCGGCGTGCGCGGATCTAAGCGGCTCCCTTCGGCTTGATCGGAGCGGCGCGACGCGGCTCGGCTGTCCTCCTCAGATCGAAGCGGCGCGGCGAGTTCCGGTTTCGGCTGGCTCGGCGAGTTCCAGCTTCGACTGTCTCGGCGAGTTCCGGCTTCGGCTTGCAGACGCGCGACTGATCGGCTTCGGCTGTCTCGGCGAGTTCCGGCTTCGGCTTGCAGACGCGGCGCGGCTGGGAGGGTGGTTCGGCTCTACTGCGGCCGGCTCCGACGCTTGTGCTTGA

Coding sequence (CDS)

ATGGGCTGGACGCGGCGCGGCTGCACGCGGAGAGGGCTGGCCGACGCGGTTTCGGCTTCGGCTTCGGGCGCGCGGACGTGGAGCGGCTCCGGGTTCGGGTTCGTCGGCTGGAGGCACGCGCGGCGGATCGGCTTCGGGTGGCGGCTGCGGGAGACGGCTGTGCGCGGATGCCCGGCGTGCGCGGATCTAAGCGGCTCCCTTCGGCTTGATCGGAGCGGCGCGACGCGGCTCGGCTGTCCTCCTCAGATCGAAGCGGCGCGGCGAGTTCCGGTTTCGGCTGGCTCGGCGAGTTCCAGCTTCGACTGTCTCGGCGAGTTCCGGCTTCGGCTTGCAGACGCGCGACTGATCGGCTTCGGCTGTCTCGGCGAGTTCCGGCTTCGGCTTGCAGACGCGGCGCGGCTGGGAGGGTGGTTCGGCTCTACTGCGGCCGGCTCCGACGCTTGTGCTTGA

Protein sequence

MGWTRRGCTRRGLADAVSASASGARTWSGSGFGFVGWRHARRIGFGWRLRETAVRGCPACADLSGSLRLDRSGATRLGCPPQIEAARRVPVSAGSASSSFDCLGEFRLRLADARLIGFGCLGEFRLRLADAARLGGWFGSTAAGSDACA
Homology
BLAST of IVF0002015 vs. ExPASy TrEMBL
Match: A0A5D3CAW8 (Protein-serine/threonine phosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00730 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 60/89 (67.42%), Postives = 62/89 (69.66%), Query Frame = 0

Query: 5   RRGCTRRGLADAVSASASGARTWSGSGFGFVGWRHARRIGFGWRLRETAVRGCPACADLS 64
           RR CTR    D + A+                  HARRIGF WRLRETAVRGCPACADLS
Sbjct: 54  RRSCTRAARLDGLDAAR----------------LHARRIGFEWRLRETAVRGCPACADLS 113

Query: 65  GSLRLDRSGATRLGCPPQIEAARRVPVSA 94
           GSLRLDRSGATRLGCPPQIEAARRVP SA
Sbjct: 114 GSLRLDRSGATRLGCPPQIEAARRVPASA 126

BLAST of IVF0002015 vs. ExPASy TrEMBL
Match: A0A5A7UMB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00500 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.3e-07
Identity = 61/154 (39.61%), Postives = 67/154 (43.51%), Query Frame = 0

Query: 9   TRRGLADAVSASASGARTWSGSGFGFVGWRHARRIGFGWRLRETAVRGCP---------- 68
           TRRGL DA       AR    +   FVGWRHARRIGF WRLRETAVRG            
Sbjct: 108 TRRGL-DAALRFRLRARGRGAAPGSFVGWRHARRIGFEWRLRETAVRGSKRLPSARSERR 167

Query: 69  ---------ACADLSGSLRLDRSGATRLGCPPQIEAARRVPVSAGSASSSFDCLGEFRLR 128
                      A    + RLDRS ATRLG PP    A      A +        GEFRL 
Sbjct: 168 GWLNFSDRRGAASFGCTDRLDRSDATRLGYPPDRSGA------ASAVLLRSKRRGEFRL- 227

Query: 129 LADARLIGFGCLGEFRLRLADAARLGGWFGSTAA 144
                         +RLR+    R GGWFG  +A
Sbjct: 228 -------------GWRLRIRLQTR-GGWFGFHSA 239

BLAST of IVF0002015 vs. ExPASy TrEMBL
Match: A0A5A7UMD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00260 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07
Identity = 59/159 (37.11%), Postives = 67/159 (42.14%), Query Frame = 0

Query: 9   TRRGLADAVSASASGARTWSGSGFGFVGWRHARRIGFGWRLRETAVRGC----PACADLS 68
           TRRGL DA       AR    +   FVGWRHARRIGF WRLRETAVRG      A ++  
Sbjct: 108 TRRGL-DAALRFRLRARGRGAAPGSFVGWRHARRIGFEWRLRETAVRGSKRLPSARSERR 167

Query: 69  GSLRL-DRSGATRLGCPPQIEA--ARRVPVSAGSASSSFDCLGEFRLRL----------- 128
           G L   DR GA    C  +++    R   +  GS S+     G  RL             
Sbjct: 168 GWLNFSDRRGAASFDCTDRLDRFFRRGWKLGGGSVSTCRRAAGWLRLSRRVPAALRRIYA 227

BLAST of IVF0002015 vs. NCBI nr
Match: TYK08635.1 (serine/threonine-protein phosphatase 5 [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (286), Expect = 4.48e-28
Identity = 60/89 (67.42%), Postives = 62/89 (69.66%), Query Frame = 0

Query: 5   RRGCTRRGLADAVSASASGARTWSGSGFGFVGWRHARRIGFGWRLRETAVRGCPACADLS 64
           RR CTR    D + A+                  HARRIGF WRLRETAVRGCPACADLS
Sbjct: 54  RRSCTRAARLDGLDAARL----------------HARRIGFEWRLRETAVRGCPACADLS 113

Query: 65  GSLRLDRSGATRLGCPPQIEAARRVPVSA 93
           GSLRLDRSGATRLGCPPQIEAARRVP SA
Sbjct: 114 GSLRLDRSGATRLGCPPQIEAARRVPASA 126

BLAST of IVF0002015 vs. NCBI nr
Match: KAA0056258.1 (hypothetical protein E6C27_scaffold226G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 2.40e-10
Identity = 61/159 (38.36%), Postives = 70/159 (44.03%), Query Frame = 0

Query: 9   TRRGLADAVSASASGARTWSGSGFGFVGWRHARRIGFGWRLRETAVRGCP----ACADLS 68
           TRRGL DA       AR    +   FVGWRHARRIGF WRLRETAVRG      A ++  
Sbjct: 108 TRRGL-DAALRFRLRARGRGAAPGSFVGWRHARRIGFEWRLRETAVRGSKRLPSARSERR 167

Query: 69  GSLRL-DRSGATRLGCPPQIEA--ARRVPVSAGSASSSFDCLGEFRL---------RLAD 127
           G L   DR GA    C  +++    R   +  GS S+     G  RL         R+  
Sbjct: 168 GWLNFSDRRGAASFDCTDRLDRFFRRGWKLGGGSVSTCRRAAGWLRLSRRVPAALRRIYA 227

BLAST of IVF0002015 vs. NCBI nr
Match: KAA0056280.1 (uncharacterized protein E6C27_scaffold226G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 3.02e-10
Identity = 59/150 (39.33%), Postives = 64/150 (42.67%), Query Frame = 0

Query: 9   TRRGLADAVSASASGARTWSGSGFGFVGWRHARRIGFGWRLRETAVRGCP---------- 68
           TRRGL DA       AR    +   FVGWRHARRIGF WRLRETAVRG            
Sbjct: 108 TRRGL-DAALRFRLRARGRGAAPGSFVGWRHARRIGFEWRLRETAVRGSKRLPSARSERR 167

Query: 69  ---------ACADLSGSLRLDRSGATRLGCPPQIEAARRVPVSAGSASSSFDCLGEFRLR 128
                      A    + RLDRS ATRLG PP    A    +            GEFRL 
Sbjct: 168 GWLNFSDRRGAASFGCTDRLDRSDATRLGYPPDRSGAASAVLLRSKRR------GEFRL- 227

Query: 129 LADARLIGFGCLGEFRLRLADAARLGGWFG 139
                         +RLR+    R GGWFG
Sbjct: 228 -------------GWRLRIRLQTR-GGWFG 235

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CAW81.2e-2167.42Protein-serine/threonine phosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7UMB91.3e-0739.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UMD81.7e-0737.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
TYK08635.14.48e-2867.42serine/threonine-protein phosphatase 5 [Cucumis melo var. makuwa][more]
KAA0056258.12.40e-1038.36hypothetical protein E6C27_scaffold226G00260 [Cucumis melo var. makuwa][more]
KAA0056280.13.02e-1039.33uncharacterized protein E6C27_scaffold226G00500 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002015.1IVF0002015.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004722 protein serine/threonine phosphatase activity