IVF0002006 (gene) Melon (IVF77) v1

Overview


Name	IVF0002006
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Flocculation protein FLO11-like
Location	chr04: 14375660 .. 14376469 (-)
RNA-Seq Expression	IVF0002006
Synteny	IVF0002006

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCCTCACCACCAAAAACTACAACTTCTTCGAAGGGCAAATGCTACAAAGGAATCCCAACGAAACATTCATATAAGAAAATTCGCAGGTCTGTTCCACCTACTAAGGAAGGTCAAAACTGTCCAGTACCCATCTCTGTCCATTGCTCACATGCAGGGCGATCTTCTAAACTAGTATCTCCTCTTACTATCAAAAGGGAAGTCCTTGAGTTTTCTCCACCACACACATCCCGTCCGTCTGCGTCCTCCTCTATGTCAGAACCTAGGGTTTTCGTTGAGACAGTGGTATTAGATTCTGATTCCTCTGACAGTGAAGACAATGTGGTGTTGTCAACCCTTCTTCATTGCAAGGTAGGGTCTCGTTCTTGTCAATCCCCACCAAGGGAAGCATCTCCTCCTAAGGAGGATCTATCTCGGCCTACTGACCATGGTCAGTCTTTCGCTGCTTCGTCATCACCTCATGCTTCCCCACAAGCTTCTCTTCCAAATAATGAAGACGATGCACGTGACGAAACTGACGAAGATTATGTACCTGGAACTGAAGAAATGACTGTACCCGAGGACTCTTTGACATTTACTGAGGATCCTAGTGTATCCCATCATACTCGAACGTCGAAACCTAGTTCAACTGAAGGCTCGGGTGAATTCTCCACTCTGATGTCACCGCATGGGCATGTCGGTTCCTCCTCTGGTTCGCGTCGTCCTCCTGTCAGAGGACAACGTGTCATCTTAACCCAGGCAGGACGAAGGAAGATACCCCCAAATGTACCCTCTATGCCAATTGACGGTGTGTCTTTTCACTCTTAG

mRNA sequence

ATGGCTCCCTCACCACCAAAAACTACAACTTCTTCGAAGGGCAAATGCTACAAAGGAATCCCAACGAAACATTCATATAAGAAAATTCGCAGGTCTGTTCCACCTACTAAGGAAGGTCAAAACTGTCCAGTACCCATCTCTGTCCATTGCTCACATGCAGGGCGATCTTCTAAACTAGTATCTCCTCTTACTATCAAAAGGGAAGTCCTTGAGTTTTCTCCACCACACACATCCCGTCCGTCTGCGTCCTCCTCTATGTCAGAACCTAGGGTTTTCGTTGAGACAGTGGTATTAGATTCTGATTCCTCTGACAGTGAAGACAATGTGGTGTTGTCAACCCTTCTTCATTGCAAGGTAGGGTCTCGTTCTTGTCAATCCCCACCAAGGGAAGCATCTCCTCCTAAGGAGGATCTATCTCGGCCTACTGACCATGGTCAGTCTTTCGCTGCTTCGTCATCACCTCATGCTTCCCCACAAGCTTCTCTTCCAAATAATGAAGACGATGCACGTGACGAAACTGACGAAGATTATGTACCTGGAACTGAAGAAATGACTGTACCCGAGGACTCTTTGACATTTACTGAGGATCCTAGTGTATCCCATCATACTCGAACGTCGAAACCTAGTTCAACTGAAGGCTCGGGTGAATTCTCCACTCTGATGTCACCGCATGGGCATGTCGGTTCCTCCTCTGGTTCGCGTCGTCCTCCTGTCAGAGGACAACGTGTCATCTTAACCCAGGCAGGACGAAGGAAGATACCCCCAAATGTACCCTCTATGCCAATTGACGGTGTGTCTTTTCACTCTTAG

Coding sequence (CDS)

ATGGCTCCCTCACCACCAAAAACTACAACTTCTTCGAAGGGCAAATGCTACAAAGGAATCCCAACGAAACATTCATATAAGAAAATTCGCAGGTCTGTTCCACCTACTAAGGAAGGTCAAAACTGTCCAGTACCCATCTCTGTCCATTGCTCACATGCAGGGCGATCTTCTAAACTAGTATCTCCTCTTACTATCAAAAGGGAAGTCCTTGAGTTTTCTCCACCACACACATCCCGTCCGTCTGCGTCCTCCTCTATGTCAGAACCTAGGGTTTTCGTTGAGACAGTGGTATTAGATTCTGATTCCTCTGACAGTGAAGACAATGTGGTGTTGTCAACCCTTCTTCATTGCAAGGTAGGGTCTCGTTCTTGTCAATCCCCACCAAGGGAAGCATCTCCTCCTAAGGAGGATCTATCTCGGCCTACTGACCATGGTCAGTCTTTCGCTGCTTCGTCATCACCTCATGCTTCCCCACAAGCTTCTCTTCCAAATAATGAAGACGATGCACGTGACGAAACTGACGAAGATTATGTACCTGGAACTGAAGAAATGACTGTACCCGAGGACTCTTTGACATTTACTGAGGATCCTAGTGTATCCCATCATACTCGAACGTCGAAACCTAGTTCAACTGAAGGCTCGGGTGAATTCTCCACTCTGATGTCACCGCATGGGCATGTCGGTTCCTCCTCTGGTTCGCGTCGTCCTCCTGTCAGAGGACAACGTGTCATCTTAACCCAGGCAGGACGAAGGAAGATACCCCCAAATGTACCCTCTATGCCAATTGACGGTGTGTCTTTTCACTCTTAG

Protein sequence

MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLVSPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVGSRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPGTEEMTVPEDSLTFTEDPSVSHHTRTSKPSSTEGSGEFSTLMSPHGHVGSSSGSRRPPVRGQRVILTQAGRRKIPPNVPSMPIDGVSFHS

Homology

[Close]

BLAST of IVF0002006 vs. ExPASy TrEMBL
Match: A0A5A7UGS9 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001770 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 3.1e-84
Identity = 184/269 (68.40%), Postives = 196/269 (72.86%), Query Frame = 0


Query: 1   MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLV 60
           MA SPPKT TSSKGK YKGIPTKH YKKI RSVPPT+EGQ+C VPI VHCSHAG SS   
Sbjct: 337 MALSPPKTVTSSKGKRYKGIPTKHPYKKIHRSVPPTEEGQHCQVPIPVHCSHAGCSSNPG 396

Query: 61  SPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVG 120
           S +T+K+EV EFSPP TS  S SSS+ EPRV +ETVVLDSDSSDS+DNVVLSTLLH K  
Sbjct: 397 SLITVKKEVPEFSPPRTSHLSTSSSVPEPRVSIETVVLDSDSSDSKDNVVLSTLLHRK-- 456

Query: 121 SRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPG 180
                                     S AA SSPHA PQASLP NEDDA DETDEDYVPG
Sbjct: 457 --------------------------SSAAPSSPHAFPQASLPTNEDDASDETDEDYVPG 516

Query: 181 TEEMTVPEDSLTFTEDPSVSHHTRTSKPSSTEGSGEFSTLMSPHGHVGSSSGSRRPPVRG 240
           TEE TV EDS T TEDPS SH  RT +P STEGS EFS  MSP G+V SS   RRPPVRG
Sbjct: 517 TEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMSPPGNVDSSYSLRRPPVRG 576

Query: 241 QRVILTQAGRRKIPPNVPSMPIDGVSFHS 270
           QRV  T+AGRRKIPPNVPS+PIDGVSF S
Sbjct: 577 QRVFSTKAGRRKIPPNVPSVPIDGVSFRS 577

[Close]

BLAST of IVF0002006 vs. ExPASy TrEMBL
Match: A0A1S3B3W2 (uncharacterized protein LOC103485722 OS=Cucumis melo OX=3656 GN=LOC103485722 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 3.1e-84
Identity = 184/269 (68.40%), Postives = 196/269 (72.86%), Query Frame = 0


Query: 1   MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLV 60
           MA SPPKT TSSKGK YKGIPTKH YKKI RSVPPT+EGQ+C VPI VHCSHAG SS   
Sbjct: 162 MALSPPKTVTSSKGKRYKGIPTKHPYKKIHRSVPPTEEGQHCQVPIPVHCSHAGCSSNPG 221

Query: 61  SPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVG 120
           S +T+K+EV EFSPP TS  S SSS+ EPRV +ETVVLDSDSSDS+DNVVLSTLLH K  
Sbjct: 222 SLITVKKEVPEFSPPRTSHLSTSSSVPEPRVSIETVVLDSDSSDSKDNVVLSTLLHRK-- 281

Query: 121 SRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPG 180
                                     S AA SSPHA PQASLP NEDDA DETDEDYVPG
Sbjct: 282 --------------------------SSAAPSSPHAFPQASLPTNEDDASDETDEDYVPG 341

Query: 181 TEEMTVPEDSLTFTEDPSVSHHTRTSKPSSTEGSGEFSTLMSPHGHVGSSSGSRRPPVRG 240
           TEE TV EDS T TEDPS SH  RT +P STEGS EFS  MSP G+V SS   RRPPVRG
Sbjct: 342 TEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMSPPGNVDSSYSLRRPPVRG 401

Query: 241 QRVILTQAGRRKIPPNVPSMPIDGVSFHS 270
           QRV  T+AGRRKIPPNVPS+PIDGVSF S
Sbjct: 402 QRVFSTKAGRRKIPPNVPSVPIDGVSFRS 402

[Close]

BLAST of IVF0002006 vs. ExPASy TrEMBL
Match: A0A5A7U568 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00060 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.1e-78
Identity = 173/264 (65.53%), Postives = 193/264 (73.11%), Query Frame = 0


Query: 1   MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLV 60
           MAPSP KT TS K K YKGIPTKH YKKIR S PP +EGQ+C VPI VHCSH G+SSK +
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381

Query: 61  SPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVG 120
           S +T+KREV EF PP  SRPSASSS+ +PRV VETVV+D DS DSEDNVVLS+LLHCKVG
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441

Query: 121 SRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPG 180
           SRS                     G S AA SSPHASPQASL  +EDDA ++TDEDYVP 
Sbjct: 442 SRS---------------------GHSLAAPSSPHASPQASLSTDEDDASNKTDEDYVPR 501

Query: 181 TEEMTVPEDSLTFTEDPSVSHHTRTSKPSSTEGSGEFSTLMSPHGHVGSSSGSRRPPVRG 240
           TEE TV EDS T TED SVSH TR S+P  T+G  EF T MS  GHVGSS   RR PVRG
Sbjct: 502 TEETTVLEDSSTSTEDLSVSHGTRMSEPRLTKGPDEFFTPMSRPGHVGSSFSLRRLPVRG 561

Query: 241 QRVILTQAGRRKIPPNVPSMPIDG 265
           QRV+ T+AG+RKIPP+VPS+ IDG
Sbjct: 562 QRVVSTKAGQRKIPPHVPSVSIDG 564

[Close]

BLAST of IVF0002006 vs. ExPASy TrEMBL
Match: A0A5D3DV20 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold742G00050 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 5.6e-78
Identity = 172/263 (65.40%), Postives = 192/263 (73.00%), Query Frame = 0


Query: 1   MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLV 60
           MAPSP KT TS K K YKGIPTKH YKKIR S PP +EGQ+C VPI VHCSH G+SSK +
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381

Query: 61  SPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVG 120
           S +T+KREV EF PP  SRPSASSS+ +PRV VETVV+D DS DSEDNVVLS+LLHCKVG
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441

Query: 121 SRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPG 180
           SRS                     G S AA SSPHASPQASL  +EDDA ++TDEDYVP 
Sbjct: 442 SRS---------------------GHSLAAPSSPHASPQASLSTDEDDASNKTDEDYVPR 501

Query: 181 TEEMTVPEDSLTFTEDPSVSHHTRTSKPSSTEGSGEFSTLMSPHGHVGSSSGSRRPPVRG 240
           TEE TV EDS T TED SVSH TR S+P  T+G  EF T MS  GHVGSS   RR PVRG
Sbjct: 502 TEETTVLEDSSTSTEDLSVSHGTRMSEPRLTKGPDEFFTPMSRPGHVGSSFSLRRLPVRG 561

Query: 241 QRVILTQAGRRKIPPNVPSMPID 264
           QRV+ T+AG+RKIPP+VPS+ ID
Sbjct: 562 QRVVSTKAGQRKIPPHVPSVSID 563

[Close]

BLAST of IVF0002006 vs. ExPASy TrEMBL
Match: A0A5D3D7D8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00140 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 9.0e-60
Identity = 132/187 (70.59%), Postives = 147/187 (78.61%), Query Frame = 0


Query: 1   MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLV 60
           MAP PPKT    KGK YKGIPTKH YKKI +    T+EGQ+C VP  VHCSHA + S  V
Sbjct: 689 MAPLPPKT---FKGKRYKGIPTKHPYKKICQFATLTEEGQHCHVPNLVHCSHAVQPSNPV 748

Query: 61  SPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVG 120
           SP+T+K+EVLEFSPP T+RPSA   +SEPRV VETVVLDSDSSDSEDNVVLSTLLH KVG
Sbjct: 749 SPVTVKKEVLEFSPPRTARPSAFFLVSEPRVSVETVVLDSDSSDSEDNVVLSTLLHRKVG 808

Query: 121 SRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPG 180
           S S + PPREASPPKEDL+RPTDH    AA S PH S Q SLPN+EDDA D+ DEDYVPG
Sbjct: 809 SCSGKFPPREASPPKEDLTRPTDHSPPSAAPSLPHTSSQVSLPNDEDDASDKIDEDYVPG 868

Query: 181 TEEMTVP 188
           TE+ T+P
Sbjct: 869 TEDTTIP 872

[Close]

BLAST of IVF0002006 vs. NCBI nr
Match: XP_008441642.1 (PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo])

HSP 1 Score: 318 bits (815), Expect = 1.52e-102
Identity = 184/269 (68.40%), Postives = 196/269 (72.86%), Query Frame = 0


Query: 1   MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLV 60
           MA SPPKT TSSKGK YKGIPTKH YKKI RSVPPT+EGQ+C VPI VHCSHAG SS   
Sbjct: 162 MALSPPKTVTSSKGKRYKGIPTKHPYKKIHRSVPPTEEGQHCQVPIPVHCSHAGCSSNPG 221

Query: 61  SPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVG 120
           S +T+K+EV EFSPP TS  S SSS+ EPRV +ETVVLDSDSSDS+DNVVLSTLLH K  
Sbjct: 222 SLITVKKEVPEFSPPRTSHLSTSSSVPEPRVSIETVVLDSDSSDSKDNVVLSTLLHRK-- 281

Query: 121 SRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPG 180
                                     S AA SSPHA PQASLP NEDDA DETDEDYVPG
Sbjct: 282 --------------------------SSAAPSSPHAFPQASLPTNEDDASDETDEDYVPG 341

Query: 181 TEEMTVPEDSLTFTEDPSVSHHTRTSKPSSTEGSGEFSTLMSPHGHVGSSSGSRRPPVRG 240
           TEE TV EDS T TEDPS SH  RT +P STEGS EFS  MSP G+V SS   RRPPVRG
Sbjct: 342 TEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMSPPGNVDSSYSLRRPPVRG 401

Query: 241 QRVILTQAGRRKIPPNVPSMPIDGVSFHS 269
           QRV  T+AGRRKIPPNVPS+PIDGVSF S
Sbjct: 402 QRVFSTKAGRRKIPPNVPSVPIDGVSFRS 402

[Close]

BLAST of IVF0002006 vs. NCBI nr
Match: KAA0055022.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 318 bits (815), Expect = 1.61e-100
Identity = 184/269 (68.40%), Postives = 196/269 (72.86%), Query Frame = 0


Query: 1   MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLV 60
           MA SPPKT TSSKGK YKGIPTKH YKKI RSVPPT+EGQ+C VPI VHCSHAG SS   
Sbjct: 337 MALSPPKTVTSSKGKRYKGIPTKHPYKKIHRSVPPTEEGQHCQVPIPVHCSHAGCSSNPG 396

Query: 61  SPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVG 120
           S +T+K+EV EFSPP TS  S SSS+ EPRV +ETVVLDSDSSDS+DNVVLSTLLH K  
Sbjct: 397 SLITVKKEVPEFSPPRTSHLSTSSSVPEPRVSIETVVLDSDSSDSKDNVVLSTLLHRK-- 456

Query: 121 SRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPG 180
                                     S AA SSPHA PQASLP NEDDA DETDEDYVPG
Sbjct: 457 --------------------------SSAAPSSPHAFPQASLPTNEDDASDETDEDYVPG 516

Query: 181 TEEMTVPEDSLTFTEDPSVSHHTRTSKPSSTEGSGEFSTLMSPHGHVGSSSGSRRPPVRG 240
           TEE TV EDS T TEDPS SH  RT +P STEGS EFS  MSP G+V SS   RRPPVRG
Sbjct: 517 TEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMSPPGNVDSSYSLRRPPVRG 576

Query: 241 QRVILTQAGRRKIPPNVPSMPIDGVSFHS 269
           QRV  T+AGRRKIPPNVPS+PIDGVSF S
Sbjct: 577 QRVFSTKAGRRKIPPNVPSVPIDGVSFRS 577

[Close]

BLAST of IVF0002006 vs. NCBI nr
Match: KAA0050418.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 300 bits (768), Expect = 5.85e-94
Identity = 173/264 (65.53%), Postives = 193/264 (73.11%), Query Frame = 0


Query: 1   MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLV 60
           MAPSP KT TS K K YKGIPTKH YKKIR S PP +EGQ+C VPI VHCSH G+SSK +
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381

Query: 61  SPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVG 120
           S +T+KREV EF PP  SRPSASSS+ +PRV VETVV+D DS DSEDNVVLS+LLHCKVG
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441

Query: 121 SRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPG 180
           SRS                     G S AA SSPHASPQASL  +EDDA ++TDEDYVP 
Sbjct: 442 SRS---------------------GHSLAAPSSPHASPQASLSTDEDDASNKTDEDYVPR 501

Query: 181 TEEMTVPEDSLTFTEDPSVSHHTRTSKPSSTEGSGEFSTLMSPHGHVGSSSGSRRPPVRG 240
           TEE TV EDS T TED SVSH TR S+P  T+G  EF T MS  GHVGSS   RR PVRG
Sbjct: 502 TEETTVLEDSSTSTEDLSVSHGTRMSEPRLTKGPDEFFTPMSRPGHVGSSFSLRRLPVRG 561

Query: 241 QRVILTQAGRRKIPPNVPSMPIDG 264
           QRV+ T+AG+RKIPP+VPS+ IDG
Sbjct: 562 QRVVSTKAGQRKIPPHVPSVSIDG 564

[Close]

BLAST of IVF0002006 vs. NCBI nr
Match: TYK27533.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (762), Expect = 7.04e-93
Identity = 172/263 (65.40%), Postives = 192/263 (73.00%), Query Frame = 0


Query: 1   MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLV 60
           MAPSP KT TS K K YKGIPTKH YKKIR S PP +EGQ+C VPI VHCSH G+SSK +
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381

Query: 61  SPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVG 120
           S +T+KREV EF PP  SRPSASSS+ +PRV VETVV+D DS DSEDNVVLS+LLHCKVG
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441

Query: 121 SRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPG 180
           SRS                     G S AA SSPHASPQASL  +EDDA ++TDEDYVP 
Sbjct: 442 SRS---------------------GHSLAAPSSPHASPQASLSTDEDDASNKTDEDYVPR 501

Query: 181 TEEMTVPEDSLTFTEDPSVSHHTRTSKPSSTEGSGEFSTLMSPHGHVGSSSGSRRPPVRG 240
           TEE TV EDS T TED SVSH TR S+P  T+G  EF T MS  GHVGSS   RR PVRG
Sbjct: 502 TEETTVLEDSSTSTEDLSVSHGTRMSEPRLTKGPDEFFTPMSRPGHVGSSFSLRRLPVRG 561

Query: 241 QRVILTQAGRRKIPPNVPSMPID 263
           QRV+ T+AG+RKIPP+VPS+ ID
Sbjct: 562 QRVVSTKAGQRKIPPHVPSVSID 563

[Close]

BLAST of IVF0002006 vs. NCBI nr
Match: KAA0025117.1 (hypothetical protein E6C27_scaffold124G00150 [Cucumis melo var. makuwa] >TYK19360.1 hypothetical protein E5676_scaffold3037G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 237 bits (605), Expect = 3.12e-68
Identity = 132/187 (70.59%), Postives = 147/187 (78.61%), Query Frame = 0


Query: 1   MAPSPPKTTTSSKGKCYKGIPTKHSYKKIRRSVPPTKEGQNCPVPISVHCSHAGRSSKLV 60
           MAP PPKT    KGK YKGIPTKH YKKI +    T+EGQ+C VP  VHCSHA + S  V
Sbjct: 689 MAPLPPKTF---KGKRYKGIPTKHPYKKICQFATLTEEGQHCHVPNLVHCSHAVQPSNPV 748

Query: 61  SPLTIKREVLEFSPPHTSRPSASSSMSEPRVFVETVVLDSDSSDSEDNVVLSTLLHCKVG 120
           SP+T+K+EVLEFSPP T+RPSA   +SEPRV VETVVLDSDSSDSEDNVVLSTLLH KVG
Sbjct: 749 SPVTVKKEVLEFSPPRTARPSAFFLVSEPRVSVETVVLDSDSSDSEDNVVLSTLLHRKVG 808

Query: 121 SRSCQSPPREASPPKEDLSRPTDHGQSFAASSSPHASPQASLPNNEDDARDETDEDYVPG 180
           S S + PPREASPPKEDL+RPTDH    AA S PH S Q SLPN+EDDA D+ DEDYVPG
Sbjct: 809 SCSGKFPPREASPPKEDLTRPTDHSPPSAAPSLPHTSSQVSLPNDEDDASDKIDEDYVPG 868

Query: 181 TEEMTVP 187
           TE+ T+P
Sbjct: 869 TEDTTIP 872

The following BLAST results are available for this feature:

BLAST of IVF0002006 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0002006 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UGS9	3.1e-84	68.40	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3B3W2	3.1e-84	68.40	uncharacterized protein LOC103485722 OS=Cucumis melo OX=3656 GN=LOC103485722 PE=...	[more]
A0A5A7U568	1.1e-78	65.53	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3DV20	5.6e-78	65.40	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3D7D8	9.0e-60	70.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0002006 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441642.1	1.52e-102	68.40	PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo]	[more]
KAA0055022.1	1.61e-100	68.40	flocculation protein FLO11-like [Cucumis melo var. makuwa]	[more]
KAA0050418.1	5.85e-94	65.53	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK27533.1	7.04e-93	65.40	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0025117.1	3.12e-68	70.59	hypothetical protein E6C27_scaffold124G00150 [Cucumis melo var. makuwa] >TYK1936...	[more]

BLAST of IVF0002006 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002006.1	IVF0002006.1	mRNA