IVF0002002 (gene) Melon (IVF77) v1

Overview
NameIVF0002002
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA exonuclease 4
Locationchr09: 3495255 .. 3499867 (-)
RNA-Seq ExpressionIVF0002002
SyntenyIVF0002002
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTATAAGAATCTATCGTTGATATATTTTGCTATAATTGTAATTTTTTTAAAATGTTGCTATACGCTATTATAATCTACAAAATTATAATTATTATTATCTCTAAAATTACTATCCATTATAATTACCATTTTCCCTTCAGTTTGGACTCCGTTTGATTGATTTAATCTCTTAAACTTAAATTTACATGTTTGAATTTACTTTTCATTCATTTTCAGTTTTTAATATATTAATGTCTACTAATTATTCTAAAAGAATTTAATTAATTATAATTAAATTAGCTTTCACTATAATATCTCATCACATTAGAATTAATTAAAATTTTTCTCTTCATGATTAGTTTTAAATCAATTAATTAAGAGTTTATTATTAAATATACAAAAGTTAACCTAATCTAATATTCAAAGAGTAAAATTGAAAAATATTGAAAGGAAAACTCAACTCGATATTGAAAGGAAAAAAATTTAACATTATAAAACAAAGAGGCTAAATGAAAATAAACTCAAAACGCTTATGGGGTACGACTATAACATCTAAAAACGTAACGACGAAGAGAAACCTACAATTAAAACCTAGTAACAAAAAGGTTATTTCCTCCTAAGTTTATATTTATCACCAAAATGAAACTCACTGACCAAAGTGGATAACAAATGAAAAATTTATCTTTTCCCAACTTCGTCCTTTCTACCCACACGATCATGATTAATATTTAAATTCAAATGAGGTAATTAAAGAAGCAATTTTTATGAGTTGACCTTGGTAAAAAGATGTAGCTAGGCTAATTCGAAAATATTCTTGTTCTTCTTTATTGAGGGCCCAAACCTTTTTGTTTTGTTCCAAGCCACACCCCAAAGTTACATTATTAGAATATACTTTTGTTGTTGACCCTAAAAAGCTTCATAAAAGAATCCTAATTTCTCACTATATAATACCTTCTTTCTTTCCCATTTTCTCCCATCAAAAACTCTTCCAAATCATCTTCTCACAGTCAATTATTGTTGCCTCCTAAATAACTATTCTTTTTATCAGAAGAAATGGATCATTCACTTGAGACATCGAGGTTTCTCTCTCTATCTATCTCTTTGCATGTATATATATACAGAAAGATTTAAGTTTCTTACTCCTAGCTTGGTTTATATATATATATATATATATATATATGTTTTATGTTAGTTAAGCTATACTGACCGATTTTTAAAAAATGTTTGGTTTTTGTGGATGAAATAGGCACAAGTGTGCAGCTTGTTTTAGGCAATTCAATAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGTAATGTCACTTCTTCTAATTCATAATTGGACTTAATTAAGAAATTCTTTTTGGAACATACCCACCTGAACCAAAATATTTACAAGATAATTTTGCTAAATATCACAACGATGGATCGTGATAAACCAATATAGACTATTAGATATGTCTATCTGTATCATGATAGATATATACGGTGGTCTATTGTCACAGATAGATTGTGATATTTCTTTTGTTCTATTAGAGAATATTTTTAGAAGTTTTGTCATTTAAAATAATTTTCCTCGAAATTAAGCCCAAAAGTTACGACATATGTTTGATCTCATAGTATGTTAAAAATAATTTCTAAGAGGATGAGTTATGATAGATTTATTCTTAGAATATTATCATTCCTGTCTATGCACTTTGAGTTTCATCAATAATTTTTAAAGATAGCCACTTTATATTTAGTTTAGTAAAAAACTAGTCTCTCTAACTAGAATTTTCGTTATTATAAACTTTGGATAACTTTTTTCTCTATTAGTATAAGTCTCTCTACTGAAAATATTAGGGACTAAATGGAATGAAACCGAAAAATAAAAATATTCAAAATAATATTTCAATATAGTGTAAAAATTTGTAGATCAAGATTTAAAACAGGTGAAATAAACATTAATATTCGAGAAGAAAAACGATGTTATAGGAGTTCGAACACCAAACTTCATTCTCTAATATATCATGTTAAGAGCTTAAATTGATGGGTTAAGATTCTTACATTTTCATTATTGTGTTATTAGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCAGTTAATTCTGTATGAATCCTAAAAGAACATGCATCAAAATATACTTTAAATTCTTGTTGATTTTAAAATCTTGATTTTTTTTTTTTTGCTGTTCTGGGATATCAGGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTAGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTAAGTAAAATTAAATTCATGTATATAAATTTGAAATTTAATATTATTACTCCTTTGCTTTTTTGGAATTTTGTCAAATTTTTTAGAAAAGTTAGGGACCAAATAAAAACCCGTTTGACTATTTTCAAACCTAAAAACCAACAATTTTGTAATTAATTTACTTTATAATATTTTAATACCGTAAAATGAAATAGATAGAACCATGTGATCGAACCGTTGTCAACACATGTATATACATATCATTAGAATTTAATTCATAGTTAAAATTTAGTTGTTATAATTTTATAAGAGCAAAGATCAGGTTTAATCTAAGTTAATTACTTTCGATCTCTTGCATCCTATTCAATATTTTTTGTCACTTAATATATATCTTGGGTGTTGTTTTAGGTTTCAAATATAAAACAAAAATTCGATCAACTTAGATTATAGTCAAGTTTTGTTTGGTTTCGTTTGATAATACTCTAATAAAACCCAAAACAATACCTAATTTTAAGTCGAATAATTTATCAAACCATATTGACTTAAATTCTAACTTTCACCGAACTAAATTTGCAATTTACCCTAATAATATAACCCATAAAATTTTATGAATATATTTGAAACTTTGTCATAACATTAACCTATATTAAATCTTCCATTTCTAATTTAAAAATTGAATTTTCTCAAAGCAAACACAAAATACAAAATTGAAATGATTGTTTTAACCTTTGATATGTTAAAATTAACATTAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGTAAATTGCTCGTAATAAAATTTAAATTTGTTGTAACCCATCAGCCTAAGTCGTTTTTAAGTTTCATATAGAAAATAACAAACATGGGTCCTCTAAGGATCTACTATATTTGCATATATATTACTTTTTTCTTGCATGAAAAAGAAATGGTCAAATTCAAACTTCTAACCTTTAAACTAAAAGTTTTTTTTCCTTCCTAATTTAAGCTATTAGTATTATTGGTGAAACCCTTTTCACATCTTATTGCATGTAGAAGTGAGCTCTAAACATTTAAGTTTTGTTGTTTGATTTAGTTTTCTGGTTTTTAATAATTTATGTTTGTTTTCTCTCTGTATTTCAAAACTAGTTGGTTTGATTTGACCTTTGAAAACATGAGTAGAAAGTGACTAATAACAAAAACACTTACCTGTAGAAGTAGCGTTATATAAGCTTTAACTATTTTTTAAAAGAAAAAAAAGTTATCAAACAACACCCTTGATTTCTTGATTTTATGCACCGACCCGCAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGGTAAGTTGACCCTTTAAACAAACTCTTTTTTTTTTTCTGAAAAGTCCTCCCTAAAATTTTACTTCAATTCTATTCATCTTTTTCATTTAAGGATTGAGATCCATGAAATAATACATAAATATATATCACTTGATGGGTCAAATTGGTGAAAGTAAGAAGTAAAAGGCAGATTTAGTACACTAGTACTAGAAAATTTTCCATATATATATTTTTATTTTTCGATAATATGTCGTTTTTCTCTATAGAAAATGATTAACTAAAAAGTGTGTTTTGTTAATTGTAGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGAGGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGA

mRNA sequence

ATGGATTATAAGAATCTATCGCACAAGTGTGCAGCTTGTTTTAGGCAATTCAATAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCAGTTAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTAGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGAGGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGA

Coding sequence (CDS)

ATGGATTATAAGAATCTATCGCACAAGTGTGCAGCTTGTTTTAGGCAATTCAATAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCAGTTAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTAGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGAGGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGA

Protein sequence

MDYKNLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLRT
Homology
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BLAST of IVF0002002 vs. ExPASy Swiss-Prot
Match: Q9GZR2 (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 3.1e-22
Identity = 65/186 (34.95%), Postives = 101/186 (54.30%), Query Frame = 0 

Query: 110 LGIRDGSTIIDSGRTRGSG----AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSY 169
           LG  +GS  +   + +  G    A+AL C+ VG G  G   + A+V +V++    ++  Y
Sbjct: 220 LGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKY 279

Query: 170 VKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKR 229
           VKP  PVT+YR   +GIRPE+++    ++ VQK++ E+L     K RILVGH + +DLK 
Sbjct: 280 VKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEML-----KGRILVGHALHNDLKV 339

Query: 230 LQIGYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY 289
           L + +P   IRDT  Y P     K    SL+ L++  LG  +Q       ++   AMRLY
Sbjct: 340 LFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLY 399

Query: 290 KRMRSQ 291
             ++ +
Sbjct: 400 VMVKKE 400

[Close]
BLAST of IVF0002002 vs. ExPASy Swiss-Prot
Match: Q91560 (RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 7.0e-22
Identity = 62/156 (39.74%), Postives = 85/156 (54.49%), Query Frame = 0 

Query: 130 IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRD 189
           +A+ C+ VG G DG   I A+V +V+     ++  YVKP   VT+YR   +GIRPE ++ 
Sbjct: 235 VAMDCEMVGVGMDGEESILARVSIVNLFGKCVYDKYVKPTERVTDYRTAVSGIRPEDVKK 294

Query: 190 AMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSK 249
             P K VQK++ EIL     + R LVGH V +DLK L + +P   IRDT  Y P  +  K
Sbjct: 295 GEPFKVVQKEVSEIL-----RGRTLVGHAVHNDLKILFLDHPKKAIRDTQKYKPFKQKVK 354

Query: 250 LCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY 285
               SLK L +  L   +Q G     ++   AMRLY
Sbjct: 355 SGRPSLKLLCEKILNVKVQTGEHCSVQDAQAAMRLY 385

[Close]
BLAST of IVF0002002 vs. ExPASy Swiss-Prot
Match: Q6CMT3 (RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=REX4 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.5e-21
Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 0 

Query: 123 RTRGSGA-IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTG 182
           RT G G  +++ C++VG G DG     A+V +V+   NV+   +V+P  PVT++R   +G
Sbjct: 112 RTNGVGKYVSMDCEFVGVGPDGKDSALARVSIVNYYGNVVLDLFVRPKEPVTDWRTWVSG 171

Query: 183 IRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANY 242
           I+P H+ +A+  +  QK++  +L     K RILVGH V  DL  L + +P  MIRDT+ +
Sbjct: 172 IKPHHMANAVTQEDCQKQVSNVL-----KGRILVGHSVHHDLTALMLSHPRRMIRDTSRH 231

Query: 243 PPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYK 286
            P  +  S     SLK L +  L  D+Q+G     E+    M LYK
Sbjct: 232 MPFRQKYSEGKTPSLKKLTKEILQLDIQDGEHSSIEDARATMLLYK 272

[Close]
BLAST of IVF0002002 vs. ExPASy Swiss-Prot
Match: Q6PAQ4 (RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 4.5e-21
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = 0 

Query: 129 AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIR 188
           A+AL C+ VG G  G   I A+V +V++    ++  YVKP  PVT+YR   +GIRPE+++
Sbjct: 253 ALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLK 312

Query: 189 DAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSS 248
                + V+K++ E+L     K RILVGH + +DLK L + +P   IRDT  + P     
Sbjct: 313 QGEEFEVVKKEVAEML-----KGRILVGHALHNDLKVLFLDHPKKKIRDTQKFKPFRSRV 372

Query: 249 KLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ 291
           K    SLK L++  LG  +Q       ++   AMRLY  ++ +
Sbjct: 373 KSGRPSLKRLSEKILGIRVQQAEHCSIQDAQAAMRLYVMVKRE 410

[Close]
BLAST of IVF0002002 vs. ExPASy Swiss-Prot
Match: O94375 (RNA exonuclease 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rex4 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-20
Identity = 58/163 (35.58%), Postives = 98/163 (60.12%), Query Frame = 0 

Query: 130 IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRD 189
           IA+ C+ VG   D  + + A+V +V+   +V++ +YV+P   VT++R   +G++  H+RD
Sbjct: 94  IAMDCEMVGVADD--MSVLARVSIVNYHGHVVYDTYVRPKEKVTDWRTWVSGVKSFHMRD 153

Query: 190 AMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSK 249
           A   ++VQ ++ +IL N     R+LVGH V +DLK L + +P  MIRDT+ +    K +K
Sbjct: 154 APSFEKVQAEVAKILDN-----RVLVGHAVHNDLKVLLLSHPRRMIRDTSRFSGYRKLAK 213

Query: 250 -LCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQV 292
                LK LA+V LG D+Q+G     ++    M LYK+++ ++
Sbjct: 214 GRTPGLKKLAEVILGRDIQSGQHSSVQDAQATMELYKKVKKEM 249

[Close]
BLAST of IVF0002002 vs. ExPASy TrEMBL
Match: A0A6J1JZ30 (RNA exonuclease 4 OS=Cucurbita maxima OX=3661 GN=LOC111489566 PE=3 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.1e-178
Identity = 298/335 (88.96%), Postives = 317/335 (94.63%), Query Frame = 0 

Query: 8   HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN 67
           HKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N
Sbjct: 10  HKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGPLPKQECKN 69

Query: 68  IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS 127
           +F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRGS
Sbjct: 70  VFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAIDGGRTRGS 129

Query: 128 GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHI 187
           G +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKP IPVTNYRYETTGIRPEH+
Sbjct: 130 GPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTGIRPEHV 189

Query: 188 RDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKS 247
           RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRLQIGYPS+MIRD ANYPPLMK+
Sbjct: 190 RDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANYPPLMKT 249

Query: 248 SKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK 307
           SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVH R E +PMASDPQNK
Sbjct: 250 SKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVH-RIEHHPMASDPQNK 309

Query: 308 NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           NNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Sbjct: 310 NNFAAWRESELERMSPEQMLEISRSDYYCWCMDLR 342

[Close]
BLAST of IVF0002002 vs. ExPASy TrEMBL
Match: A0A6J1FEK0 (RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111444794 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.6e-178
Identity = 298/335 (88.96%), Postives = 317/335 (94.63%), Query Frame = 0 

Query: 8   HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN 67
           HKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N
Sbjct: 10  HKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGPLPKQECKN 69

Query: 68  IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS 127
           +F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRGS
Sbjct: 70  VFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAIDGGRTRGS 129

Query: 128 GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHI 187
           G +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKPIIPVTNYRYE TGIRPEH+
Sbjct: 130 GPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPIIPVTNYRYEMTGIRPEHL 189

Query: 188 RDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKS 247
           RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRLQIGYPS+MIRD ANYPPLMK+
Sbjct: 190 RDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANYPPLMKT 249

Query: 248 SKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK 307
           SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVH R E +PMASDPQNK
Sbjct: 250 SKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVH-RIEHHPMASDPQNK 309

Query: 308 NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           NNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Sbjct: 310 NNFAAWRESELERMSPEQMLEISRSDYYCWCMDLR 342

[Close]
BLAST of IVF0002002 vs. ExPASy TrEMBL
Match: A0A6J1BZE0 (RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 5.3e-174
Identity = 290/339 (85.55%), Postives = 315/339 (92.92%), Query Frame = 0 

Query: 4   KNLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQ 63
           +++ HKCAACFRQFNKIEHLVDHMRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQ
Sbjct: 9   RSVRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREHLIGPLPKQ 68

Query: 64  ECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGR 123
           EC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S ++D GR
Sbjct: 69  ECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDASIVVDGGR 128

Query: 124 TRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIR 183
            R +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+ETTGIR
Sbjct: 129 ARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNYRFETTGIR 188

Query: 184 PEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPP 243
           PEH+RDAMP+KQVQKKIQEILYNGGEKAR+LVGH VEDDLKRLQIGYP  +IRDTANYPP
Sbjct: 189 PEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYP--IIRDTANYPP 248

Query: 244 LMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASD 303
           LMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH + E YPMASD
Sbjct: 249 LMKTSKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVH-KIEDYPMASD 308

Query: 304 PQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           PQNKNNF IWR+NEL+RM+PE ML+ISRSDYYCWC+DLR
Sbjct: 309 PQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLR 344

[Close]
BLAST of IVF0002002 vs. ExPASy TrEMBL
Match: A0A6J1BXL4 (RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.2e-173
Identity = 290/335 (86.57%), Postives = 312/335 (93.13%), Query Frame = 0 

Query: 8   HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN 67
           HKCAACFRQFNKIEHLVDHMRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQEC+N
Sbjct: 10  HKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREHLIGPLPKQECKN 69

Query: 68  IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS 127
           IF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S ++D GR R +
Sbjct: 70  IFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDASIVVDGGRARAT 129

Query: 128 GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHI 187
           G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+ETTGIRPEH+
Sbjct: 130 GTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNYRFETTGIRPEHL 189

Query: 188 RDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKS 247
           RDAMP+KQVQKKIQEILYNGGEKAR+LVGH VEDDLKRLQIGYP  +IRDTANYPPLMK+
Sbjct: 190 RDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYP--IIRDTANYPPLMKT 249

Query: 248 SKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK 307
           SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH + E YPMASDPQNK
Sbjct: 250 SKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVH-KIEDYPMASDPQNK 309

Query: 308 NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           NNF IWR+NEL+RM+PE ML+ISRSDYYCWC+DLR
Sbjct: 310 NNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLR 341

[Close]
BLAST of IVF0002002 vs. ExPASy TrEMBL
Match: A0A1S3C947 (RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103498183 PE=3 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.5e-163
Identity = 280/344 (81.40%), Postives = 310/344 (90.12%), Query Frame = 0 

Query: 8   HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN 67
           HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN
Sbjct: 10  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN 69

Query: 68  IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS 127
           IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS
Sbjct: 70  IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS 129

Query: 128 GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHI 187
           GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE TG+RPEH+
Sbjct: 130 GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYEFTGVRPEHL 189

Query: 188 RDAMPMKQVQKKIQEILYNGGE----------KARILVGHCVEDDLKRLQIGYPSVMIRD 247
           RDAMP+KQVQKKIQE L NG +          KARILVGH +++ L  LQI YPS+MIRD
Sbjct: 190 RDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTRKARILVGHGLQEYLTSLQIDYPSIMIRD 249

Query: 248 TANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRMRSQVHRRKE 307
           TA YPPLMK+SKL NSL YL Q YLG++++NG + + YEEC+  MRLY +M+SQVH+R+E
Sbjct: 250 TAKYPPLMKTSKLSNSLHYLTQTYLGYNMENGKKSEGYEECVATMRLYLKMKSQVHKREE 309

Query: 308 SYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 341
            YP+ASDP NK NFAIW++ EL++M+P+Q+L+ISRSDYYCWC+D
Sbjct: 310 -YPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLD 352

[Close]
BLAST of IVF0002002 vs. NCBI nr
Match: XP_011656270.1 (RNA exonuclease 4 [Cucumis sativus])

HSP 1 Score: 672 bits (1735), Expect = 1.40e-243
Identity = 322/335 (96.12%), Postives = 329/335 (98.21%), Query Frame = 0 

Query: 8   HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN 67
           HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQEC+N
Sbjct: 10  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKN 69

Query: 68  IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS 127
           IFATRGCKFCLAI DSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGST+IDSGRTRGS
Sbjct: 70  IFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRGS 129

Query: 128 GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHI 187
           GAIALACKYVGGGSDGS+DICAKVCL+DEGENVIFYSYVKP+  VTNYRYETTGIRPEHI
Sbjct: 130 GAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHI 189

Query: 188 RDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKS 247
           RDAMP+KQVQKKIQEILYNGGEKARILVG CVEDDLKRLQIGYPS MIRDTANYPPLMKS
Sbjct: 190 RDAMPVKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIGYPSFMIRDTANYPPLMKS 249

Query: 248 SKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK 307
           SKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHR KE+YPMASDPQNK
Sbjct: 250 SKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHR-KENYPMASDPQNK 309

Query: 308 NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 342
           NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
Sbjct: 310 NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343

[Close]
BLAST of IVF0002002 vs. NCBI nr
Match: XP_022993635.1 (RNA exonuclease 4-like [Cucurbita maxima])

HSP 1 Score: 630 bits (1626), Expect = 5.53e-227
Identity = 298/335 (88.96%), Postives = 317/335 (94.63%), Query Frame = 0 

Query: 8   HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN 67
           HKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N
Sbjct: 10  HKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGPLPKQECKN 69

Query: 68  IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS 127
           +F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRGS
Sbjct: 70  VFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAIDGGRTRGS 129

Query: 128 GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHI 187
           G +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKP IPVTNYRYETTGIRPEH+
Sbjct: 130 GPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTGIRPEHV 189

Query: 188 RDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKS 247
           RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRLQIGYPS+MIRD ANYPPLMK+
Sbjct: 190 RDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANYPPLMKT 249

Query: 248 SKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK 307
           SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR  E +PMASDPQNK
Sbjct: 250 SKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRI-EHHPMASDPQNK 309

Query: 308 NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 342
           NNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Sbjct: 310 NNFAAWRESELERMSPEQMLEISRSDYYCWCMDLR 342

[Close]
BLAST of IVF0002002 vs. NCBI nr
Match: XP_022938612.1 (RNA exonuclease 4-like [Cucurbita moschata])

HSP 1 Score: 630 bits (1624), Expect = 1.12e-226
Identity = 298/335 (88.96%), Postives = 317/335 (94.63%), Query Frame = 0 

Query: 8   HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN 67
           HKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N
Sbjct: 10  HKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGPLPKQECKN 69

Query: 68  IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS 127
           +F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRGS
Sbjct: 70  VFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAIDGGRTRGS 129

Query: 128 GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHI 187
           G +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKPIIPVTNYRYE TGIRPEH+
Sbjct: 130 GPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPIIPVTNYRYEMTGIRPEHL 189

Query: 188 RDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKS 247
           RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRLQIGYPS+MIRD ANYPPLMK+
Sbjct: 190 RDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANYPPLMKT 249

Query: 248 SKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK 307
           SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR  E +PMASDPQNK
Sbjct: 250 SKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRI-EHHPMASDPQNK 309

Query: 308 NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 342
           NNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Sbjct: 310 NNFAAWRESELERMSPEQMLEISRSDYYCWCMDLR 342

[Close]
BLAST of IVF0002002 vs. NCBI nr
Match: XP_023551468.1 (RNA exonuclease 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 619 bits (1595), Expect = 2.82e-222
Identity = 293/335 (87.46%), Postives = 316/335 (94.33%), Query Frame = 0 

Query: 8   HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN 67
           HKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N
Sbjct: 10  HKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGPLPKQECKN 69

Query: 68  IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS 127
           +F  RGCKFCLAILDSSYSQR+HQERCQFS VNSGLLAR A+LGIRDGST ID GRTRGS
Sbjct: 70  VFDMRGCKFCLAILDSSYSQRVHQERCQFSCVNSGLLARLASLGIRDGSTAIDGGRTRGS 129

Query: 128 GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHI 187
           G +ALACKYVGGG DGSLD+CAKVCL+DE EN++FYSYVKPIIPVTNYRYETTGIRPEH+
Sbjct: 130 GPVALACKYVGGG-DGSLDVCAKVCLIDESENIVFYSYVKPIIPVTNYRYETTGIRPEHL 189

Query: 188 RDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKS 247
           RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRLQIGYPS+MIRD ANYPPLMK+
Sbjct: 190 RDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANYPPLMKT 249

Query: 248 SKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK 307
           SKLCNSLKYLAQVYLGF++QNG+QD Y+ C+  MRLYKRMRSQVHR  E +PMASDPQNK
Sbjct: 250 SKLCNSLKYLAQVYLGFEIQNGVQDLYD-CVGGMRLYKRMRSQVHRI-EHHPMASDPQNK 309

Query: 308 NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 342
           NNFA WRENEL+RMSPEQMLEISRSDYYCWCMDLR
Sbjct: 310 NNFAAWRENELERMSPEQMLEISRSDYYCWCMDLR 341

[Close]
BLAST of IVF0002002 vs. NCBI nr
Match: XP_022134352.1 (RNA exonuclease 4 isoform X2 [Momordica charantia])

HSP 1 Score: 616 bits (1588), Expect = 3.68e-221
Identity = 290/339 (85.55%), Postives = 315/339 (92.92%), Query Frame = 0 

Query: 4   KNLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQ 63
           +++ HKCAACFRQFNKIEHLVDHMRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQ
Sbjct: 9   RSVRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREHLIGPLPKQ 68

Query: 64  ECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGR 123
           EC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S ++D GR
Sbjct: 69  ECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDASIVVDGGR 128

Query: 124 TRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIR 183
            R +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+ETTGIR
Sbjct: 129 ARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNYRFETTGIR 188

Query: 184 PEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPP 243
           PEH+RDAMP+KQVQKKIQEILYNGGEKAR+LVGH VEDDLKRLQIGYP  +IRDTANYPP
Sbjct: 189 PEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYP--IIRDTANYPP 248

Query: 244 LMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASD 303
           LMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+  E YPMASD
Sbjct: 249 LMKTSKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVHKI-EDYPMASD 308

Query: 304 PQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 342
           PQNKNNF IWR+NEL+RM+PE ML+ISRSDYYCWC+DLR
Sbjct: 309 PQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLR 344

[Close]
BLAST of IVF0002002 vs. TAIR 10
Match: AT3G27970.1 (Exonuclease family protein )

HSP 1 Score: 489.2 bits (1258), Expect = 2.7e-138
Identity = 230/356 (64.61%), Postives = 284/356 (79.78%), Query Frame = 0 

Query: 1   MDYKN-------LSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLR 60
           MDY++       L +KCAAC+RQFNK+EHLV+HM+ S+HS HEPTC +CKKHCRS +SLR
Sbjct: 1   MDYRSSMESSETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLR 60

Query: 61  EHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIR 120
           EHLIGPLPKQEC+NIF+ RGC+FC+ IL+S  S+R+HQERCQFS VNSGL  R A LG+R
Sbjct: 61  EHLIGPLPKQECKNIFSLRGCRFCMTILESPNSRRIHQERCQFSSVNSGLTTRMAALGLR 120

Query: 121 DGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVT 180
           D   +ID   +R    +AL+CK VGGGSDGSLD+CA+VC+ DE +NVIF++YVKP + VT
Sbjct: 121 D-KAMIDYTSSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVT 180

Query: 181 NYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG---------GEKARILVGHCVEDDLK 240
           +YRYETTGIRPE++RDAMP+KQVQ+KIQE L NG         G KARILVGH ++ DL 
Sbjct: 181 SYRYETTGIRPENLRDAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLD 240

Query: 241 RLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY 300
           RLQ+ YPS MIRDTA YPPLMK+SKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY
Sbjct: 241 RLQLEYPSSMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRLY 300

Query: 301 KRMRSQVHRRKESYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 341
            RMR Q H + E+YP+A+D QN++N   WR++E +RMSP++ML ISRSDYYCWC+D
Sbjct: 301 TRMRYQKH-KIEAYPLAADAQNRSNQVAWRQSEAERMSPDEMLSISRSDYYCWCLD 354

[Close]
BLAST of IVF0002002 vs. TAIR 10
Match: AT5G40310.1 (Exonuclease family protein )

HSP 1 Score: 481.1 bits (1237), Expect = 7.4e-136
Identity = 226/342 (66.08%), Postives = 271/342 (79.24%), Query Frame = 0 

Query: 8   HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRN 67
           +KC  C+RQFNK EHLV+HMR S+HS HEPTC IC KHCRS DSLREHLIGPLPKQEC+N
Sbjct: 6   NKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQECKN 65

Query: 68  IFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGS 127
           IF+ RGC+FCL IL+S  ++R+HQERCQ S V SGL+ R A LG+R+ ST ID   +R  
Sbjct: 66  IFSIRGCRFCLTILESPNARRIHQERCQLSNVTSGLMIRMAALGLRNNST-IDYTSSRSP 125

Query: 128 GAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHI 187
             +AL+CK VGGGSDGSLD+CA+VC+ DE ENV+F++YVKP IPVTNYRYE TGIRPE++
Sbjct: 126 RVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENL 185

Query: 188 RDAMPMKQVQKKIQEILYNG---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDT 247
           RDAM +K  Q+K+QE L NG           KARILVGH +++ L  LQ+ Y S MIRDT
Sbjct: 186 RDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDT 245

Query: 248 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESY 307
           A YPPLMKSSKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY RMR Q H R E+Y
Sbjct: 246 AEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMRYQKH-RAEAY 305

Query: 308 PMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 341
           P+ASD QN NNFA WR+NEL+RMSPE++L++SRSDYYCWC+D
Sbjct: 306 PLASDTQNHNNFAAWRQNELERMSPEELLDLSRSDYYCWCLD 345

[Close]
BLAST of IVF0002002 vs. TAIR 10
Match: AT2G48100.1 (Exonuclease family protein )

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-80
Identity = 142/341 (41.64%), Postives = 218/341 (63.93%), Query Frame = 0 

Query: 5   NLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPK 64
           ++ H+C AC++ FN+ EHLV+HM+ S+HS H+P C +C KHC+S +S+REHL  P  L K
Sbjct: 14  SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSK 73

Query: 65  QECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSG 124
             C+ IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   
Sbjct: 74  GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGS 133

Query: 125 RTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGI 184
           R +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+
Sbjct: 134 RLK---AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGL 193

Query: 185 RPEHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTA 244
             E ++D MP++ V++++   L    N G    +LVGH +  D+  L++ YPS ++RDTA
Sbjct: 194 TKEDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTA 253

Query: 245 NYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYP 304
            Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H       
Sbjct: 254 KYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------- 313

Query: 305 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 341
           + S     N     ++++L++M+ E++ + S S+Y CWC+D
Sbjct: 314 VCSGKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

[Close]
BLAST of IVF0002002 vs. TAIR 10
Match: AT2G48100.2 (Exonuclease family protein )

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-80
Identity = 142/341 (41.64%), Postives = 218/341 (63.93%), Query Frame = 0 

Query: 5   NLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPK 64
           ++ H+C AC++ FN+ EHLV+HM+ S+HS H+P C +C KHC+S +S+REHL  P  L K
Sbjct: 14  SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSK 73

Query: 65  QECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSG 124
             C+ IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   
Sbjct: 74  GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGS 133

Query: 125 RTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGI 184
           R +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+
Sbjct: 134 RLK---AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGL 193

Query: 185 RPEHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTA 244
             E ++D MP++ V++++   L    N G    +LVGH +  D+  L++ YPS ++RDTA
Sbjct: 194 TKEDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTA 253

Query: 245 NYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYP 304
            Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H       
Sbjct: 254 KYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------- 313

Query: 305 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 341
           + S     N     ++++L++M+ E++ + S S+Y CWC+D
Sbjct: 314 VCSGKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

[Close]
BLAST of IVF0002002 vs. TAIR 10
Match: AT2G48100.3 (Exonuclease family protein )

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-80
Identity = 142/341 (41.64%), Postives = 218/341 (63.93%), Query Frame = 0 

Query: 5   NLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPK 64
           ++ H+C AC++ FN+ EHLV+HM+ S+HS H+P C +C KHC+S +S+REHL  P  L K
Sbjct: 14  SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSK 73

Query: 65  QECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSG 124
             C+ IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   
Sbjct: 74  GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGS 133

Query: 125 RTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGI 184
           R +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+
Sbjct: 134 RLK---AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGL 193

Query: 185 RPEHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTA 244
             E ++D MP++ V++++   L    N G    +LVGH +  D+  L++ YPS ++RDTA
Sbjct: 194 TKEDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTA 253

Query: 245 NYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYP 304
            Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H       
Sbjct: 254 KYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------- 313

Query: 305 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 341
           + S     N     ++++L++M+ E++ + S S+Y CWC+D
Sbjct: 314 VCSGKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

The following BLAST results are available for this feature:
BLAST of IVF0002002 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9GZR23.1e-2234.95RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2[more]
Q915607.0e-2239.74RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2[more]
Q6CMT34.5e-2136.75RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 707... [more]
Q6PAQ44.5e-2136.81RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2[more]
O943751.3e-2035.58RNA exonuclease 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2848... [more]
BLAST of IVF0002002 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JZ302.1e-17888.96RNA exonuclease 4 OS=Cucurbita maxima OX=3661 GN=LOC111489566 PE=3 SV=1[more]
A0A6J1FEK03.6e-17888.96RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111444794 PE=3 SV=1[more]
A0A6J1BZE05.3e-17485.55RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1[more]
A0A6J1BXL41.2e-17386.57RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1[more]
A0A1S3C9471.5e-16381.40RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103498183 PE=3 SV=1[more]
BLAST of IVF0002002 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656270.11.40e-24396.12RNA exonuclease 4 [Cucumis sativus][more]
XP_022993635.15.53e-22788.96RNA exonuclease 4-like [Cucurbita maxima][more]
XP_022938612.11.12e-22688.96RNA exonuclease 4-like [Cucurbita moschata][more]
XP_023551468.12.82e-22287.46RNA exonuclease 4-like [Cucurbita pepo subsp. pepo][more]
XP_022134352.13.68e-22185.55RNA exonuclease 4 isoform X2 [Momordica charantia][more]
BLAST of IVF0002002 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G27970.12.7e-13864.61Exonuclease family protein [more]
AT5G40310.17.4e-13666.08Exonuclease family protein [more]
AT2G48100.12.0e-8041.64Exonuclease family protein [more]
AT2G48100.22.0e-8041.64Exonuclease family protein [more]
AT2G48100.32.0e-8041.64Exonuclease family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 128..293
e-value: 2.9E-16
score: 70.0
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 145..262
e-value: 1.5E-6
score: 28.9
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 126..306
e-value: 5.0E-36
score: 125.9
NoneNo IPR availablePANTHERPTHR12801RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATEDcoord: 6..340
NoneNo IPR availablePANTHERPTHR12801:SF122OS02G0709000 PROTEINcoord: 6..340
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 10..32
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 8..37
score: 11.530781
IPR037431RNA exonuclease 4, DEDDh 3'-5' exonuclease domainCDDcd06144REX4_likecoord: 130..285
e-value: 7.56322E-71
score: 215.458
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 143..290

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002002.2IVF0002002.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006364 rRNA processing
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003676 nucleic acid binding