IVF0001980 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATTGTCCCAAGTAAATGTCAGGGGCAACTCTATTCAAGATTTGAAGCATGCTGATGAGATAGGATGCGTGGGATATGGCGGTGCTCACACCACTAATGCACGTCTGCATAACACAAAAAATGTAGCATATGTAAAGAATGGCCCCTATTCCAACACATACAATTGGGGATGGAGAGATCACCTTAACTTCAGTTGGAGAGGTCAAGGTCAGAACAGTCAAGGGCGATAA ATGGCATTGTCCCAAGTAAATGTCAGGGGCAACTCTATTCAAGATTTGAAGCATGCTGATGAGATAGGATGCGTGGGATATGGCGGTGCTCACACCACTAATGCACGTCTGCATAACACAAAAAATGTAGCATATGTAAAGAATGGCCCCTATTCCAACACATACAATTGGGGATGGAGAGATCACCTTAACTTCAGTTGGAGAGGTCAAGGTCAGAACAGTCAAGGGCGATAA ATGGCATTGTCCCAAGTAAATGTCAGGGGCAACTCTATTCAAGATTTGAAGCATGCTGATGAGATAGGATGCGTGGGATATGGCGGTGCTCACACCACTAATGCACGTCTGCATAACACAAAAAATGTAGCATATGTAAAGAATGGCCCCTATTCCAACACATACAATTGGGGATGGAGAGATCACCTTAACTTCAGTTGGAGAGGTCAAGGTCAGAACAGTCAAGGGCGATAA MALSQVNVRGNSIQDLKHADEIGCVGYGGAHTTNARLHNTKNVAYVKNGPYSNTYNWGWRDHLNFSWRGQGQNSQGR Homology
BLAST of IVF0001980 vs. ExPASy TrEMBL
Match: A0A5A7U640 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00760 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 4.6e-33 Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of IVF0001980 vs. ExPASy TrEMBL
Match: A0A5A7UTC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76994G00070 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of IVF0001980 vs. ExPASy TrEMBL
Match: A0A5A7UG80 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G001150 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.0e-12 Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of IVF0001980 vs. ExPASy TrEMBL
Match: A0A5D3BYZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold758G00120 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.4e-12 Identity = 38/56 (67.86%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of IVF0001980 vs. ExPASy TrEMBL
Match: A0A5D3BKZ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00110 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.8e-12 Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of IVF0001980 vs. NCBI nr
Match: KAA0051353.1 (uncharacterized protein E6C27_scaffold55G00760 [Cucumis melo var. makuwa]) HSP 1 Score: 147 bits (372), Expect = 5.70e-44 Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of IVF0001980 vs. NCBI nr
Match: KAA0058408.1 (uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa] >TYK04705.1 uncharacterized protein E5676_scaffold76994G00070 [Cucumis melo var. makuwa]) HSP 1 Score: 89.4 bits (220), Expect = 3.70e-20 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of IVF0001980 vs. NCBI nr
Match: KAA0054822.1 (hypothetical protein E6C27_scaffold437G001150 [Cucumis melo var. makuwa]) HSP 1 Score: 79.3 bits (194), Expect = 4.21e-17 Identity = 36/57 (63.16%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of IVF0001980 vs. NCBI nr
Match: TYK04238.1 (hypothetical protein E5676_scaffold758G00120 [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 6.47e-17 Identity = 38/56 (67.86%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of IVF0001980 vs. NCBI nr
Match: TYJ99639.1 (hypothetical protein E5676_scaffold562G00110 [Cucumis melo var. makuwa]) HSP 1 Score: 77.8 bits (190), Expect = 1.71e-16 Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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