Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAATGCAGCGAAAGACGGTGGCTCGCACACGGCTGCGATGGAAACGCCACCGGAGACGCTGACGACTCCGGATCTGTAGCTCGAAAAAGAAGAAAAGAAAGGTTGGACTGTGGCAGCGTTCCAGACCCAGCGTCGTGCAGAGGAAAGGCAAAGAGAGTTCGGGCCTGGCTTGGCGAGGACTCGACGACCACGTTCGGTCGAAGCCGTCGACCTCAGGCGAACGGAAGATGCGCGACTGCTAACGATTGTACGTTGGCGTTGCGAGGCGGACGACGACGAAGACGGAGTGAGGGTATGCAGACGCAACCGGTTGAACTAAAGAGAAGGTGGGGACGGAGGACGGTTGTGCTGGCGCTGTTGGAAAAGAAGGAGAAGATTTAG
ATGAAACAATGCAGCGAAAGACGGTGGCTCGCACACGGCTGCGATGGAAACGCCACCGGAGACGCTGACGACTCCGGATCTGTAGCTCGAAAAAGAAGAAAAGAAAGGTTGGACTGTGGCAGCGTTCCAGACCCAGCGTCGTGCAGAGGAAAGGCAAAGAGAGTTCGGGCCTGGCTTGGCGAGGACTCGACGACCACGTTCGGTCGAAGCCGTCGACCTCAGGCGAACGGAAGATGCGCGACTGCTAACGATTGTACGTTGGCGTTGCGAGGCGGACGACGACGAAGACGGAGTGAGGGTATGCAGACGCAACCGGTTGAACTAAAGAGAAGGTGGGGACGGAGGACGGTTGTGCTGGCGCTGTTGGAAAAGAAGGAGAAGATTTAG
ATGAAACAATGCAGCGAAAGACGGTGGCTCGCACACGGCTGCGATGGAAACGCCACCGGAGACGCTGACGACTCCGGATCTGTAGCTCGAAAAAGAAGAAAAGAAAGGTTGGACTGTGGCAGCGTTCCAGACCCAGCGTCGTGCAGAGGAAAGGCAAAGAGAGTTCGGGCCTGGCTTGGCGAGGACTCGACGACCACGTTCGGTCGAAGCCGTCGACCTCAGGCGAACGGAAGATGCGCGACTGCTAACGATTGTACGTTGGCGTTGCGAGGCGGACGACGACGAAGACGGAGTGAGGGTATGCAGACGCAACCGGTTGAACTAAAGAGAAGGTGGGGACGGAGGACGGTTGTGCTGGCGCTGTTGGAAAAGAAGGAGAAGATTTAG
MKQCSERRWLAHGCDGNATGDADDSGSVARKRRKERLDCGSVPDPASCRGKAKRVRAWLGEDSTTTFGRSRRPQANGRCATANDCTLALRGGRRRRRSEGMQTQPVELKRRWGRRTVVLALLEKKEKI
Homology
BLAST of IVF0001919 vs. ExPASy TrEMBL
Match:
A0A5A7VEB6 (Adhesive plaque matrix protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001040 PE=4 SV=1)
HSP 1 Score: 55.1 bits (131), Expect = 2.5e-04
Identity = 29/63 (46.03%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of IVF0001919 vs. NCBI nr
Match:
KAA0065427.1 (Adhesive plaque matrix protein [Cucumis melo var. makuwa])
HSP 1 Score: 54.7 bits (130), Expect = 7.85e-06
Identity = 29/63 (46.03%), Postives = 37/63 (58.73%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5A7VEB6 2.5e-04 46.03 Adhesive plaque matrix protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
Match Name E-value Identity Description
KAA0065427.1 7.85e-06 46.03 Adhesive plaque matrix protein [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
A T G A A A C A A T G C A G C G A A A G A C G G T G G C T C G C A C A C G G C T G C G A T G G A A A C G C C A C C G G A G A C G C T G A C G A C T C C G G A T C T G T A G C T C G A A A A A G A A G A A A A G A A A G G T T G G A C T G T G G C A G C G T T C C A G A C C C A G C G T C G T G C A G A G G A A A G G C A A A G A G A G T T C G G G C C T G G C T T G G C G A G G A C T C G A C G A C C A C G T T C G G T C G A A G C C G T C G A C C T C A G G C G A A C G G A A G A T G C G C G A C T G C T A A C G A T T G T A C G T T G G C G T T G C G A G G C G G A C G A C G A C G A A G A C G G A G T G A G G G T A T G C A G A C G C A A C C G G T T G A A C T A A A G A G A A G G T G G G G A C G G A G G A C G G T T G T G C T G G C G C T G T T G G A A A A G A A G G A G A A G A T T T A G 50 100 150 200 250 300 350 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 15..50 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 25..40
Relationships
The following mRNA feature(s) are a part of this gene:
