IVF0001917 (gene) Melon (IVF77) v1

Overview


Name	IVF0001917
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Thioredoxin
Location	chr02: 8913474 .. 8916553 (+)
RNA-Seq Expression	IVF0001917
Synteny	IVF0001917

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAATTCACTAGATTTACAATCCTACCCCTGCAACTTTCCCTCAGTCCACAACCAAAGAATGAGCGTTTAAGTCATTTCTTATCCACCCATTCTCCACCACAATCCAATTCCACATACTTAAATGACTAAAACACTCCTAGCATTTGCCGCATCTCTCCCAAATCTCAAGGATAACATCGTAAATCCATCAACCTCCTCCCTCCACGTCTTGTCCTGCAACTTCGCTTCACTTACTCCTCCGCCATTTCTGAACCTTTTCCCAATCTCTCTCTCTCTCCTCCATGGCTTTGCATTTCTCTCTCTCCCCGCCGTCGGTCAGATCGTCGCCGTCGTTTCCCTGCAGTGGAAGGCAGCCGATCCCCGCACTTTCCGACTCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTGTCTCTAGTAGCAGAAGCATTGGTGTTTCCGGTGGGAATCGGTCCTTCAAGTTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCAAAGTCACTGAGGTCAACAAGGACACTTTCTGGCCCATTGTCAATGCCGCCGGTGATAAAACCGTTGTGCTCGACATGTACACCCAATGGTTTGTGTTTCTATGTCTCCATATATCTTTGCTTCTTAATTTTGTTGTTTCTTAGGTTACTACATTGAATTGTTCGGAATATGGTTTCGGATATGATTGTTCTTATGATAATAGATTGTTTCTGGTTTACTGATTTAGTTGCGCGATGCTTATAGTAGGGTATGGATCTCGTGATTTAAGAAATTGGAATGAAACATTGGTTTTATTTAGGCTTCTGTTTGTCAAAAGATCATAAAATTTATTAAAGTAATTCCCTCTACAAGTTGATGCCACTTTTTTTCTTTTACTACTGAGTTCGACATTGATTAAAAAATTATCATAGGAAGTCAGTTTGTTTTCTTCTTCTCCTTTACACAATAATGAGAACTTGAAAACTGGGTTTTTTCAACTTAATATCTGAAATTTTTGGGACCGGTGTTTTTCAAACTTCGAGCGCATAAAGCGCAATAGTTTTTTGGGGCTTAATGCAAGGTGAAAAAAACGTGGGTTTTTTTTTTTTTTTTTTTTTTTTCTGTGAGGCACATTATATATATAACAAAGGCCCATAGGAGAGAGCCGTGGGACATCACCAAAGGCGTGTGTATGAGGCTTGTCTTATATTGTGTGCCATTCCTTTTCAAGTAAGCCTTAAACCTAGGCACTCCCGGGAGGACATTTGGGACAATATCAAGAGAAACTGTTTGAGGAGGCACATCTCACATGAATGATTTTTTTTAACATTGCAGTTTTGGGAACAATATACAGTTGTAACATCTGCTAAATAAGTTCGAGACTTTCCAATAATGGGTATTCGCTACTGATTTAGCCAAATTATTTTTTATTGCAAATTATTTGGAATCAAGTCTATTTTAAACTTTGGAGAAATTATTTGATTAAATATCACCGCAACGTGGTTGACAGTTTCTTACTGTCAAATATAGAGTTCATTGGATAACAATTTTTTCAAGAAGTGGGGATGGGGGTTCAAACTTGTGGCCTCTTGATGAATGAGATGGGTATGCTTTTAACTTATTGAGTTATGCTTAGATTGACAATTTTGTTTAAGTACAAGCTACGTGATTGCTTGTGTCGTTTCCAATAACTTTGACATAATTTTAATTTGGTGTTCTCTGTCTTAGGCTATTTTGCTTCATCGGGCTGTGCCATTTGGTGATGGCGCCTTCCTAATGGTGATATGGTTTATCGTGGCGTGGGACTTTTAGGAAAGAAAATTTGAAAGAATGAAAAACTGGTTAGCTAAAAACACAACAGGATAGCTTGTTTATTTTAGATATAACTTATCTTACCAAAAAAAAAAAAAAAAATACTAGATGTAACATATTAAGTAAAAGGAAAATATATCGATTTAACAAGCCTCATACCACAACTTGGATACTGAATAAACTTATTTGAATCATGTTATGTAACATAACGCAGCTTAAATGTGCTTTGCCTCTTTGTTATGACCTTTTGATCTTTCTTTTCTTTCCTTTAGCTTTTAAAATATATTAATTTAGCTTTGATAAGTTTAATTAGTACAAAAAGTGCCTTTGCCTTTGACAGCCTTATTTTCTGGTAGAGTTTTTACTTTTGCCTTATTGTTTCTTGTAATAACCCAATCCTCTTGGCTGTGGTGATTAATTTTAGTTCGAAAGAACTTTCCTGGTTTTGCTATATGCAATTTCAGACTCCTTGGGAGACTATGCATTTATTAAAGTTCAAGATTCATTATTTATTGTCTCTGTTTTTGGACTCACAACAGCTTAATTAACTTTCTTTATTCAATACATGATACATTAAAGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGACTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCAAGACAATAAGGTTCATCTCATGATCCCTAATTTCTTGCTGGAAATTAGAAATGTATTTGGAGAATAGTTCATATAAGAAGTAAGAACACTTAAATTGTCTTTATCTGGCAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAAGATAAGAAGGTCGTTAAAGAAGTAACCGGAGCAAAGTTCGATGATTTGGTTCATGCCATTGATACTGTAAGATCCAGCTGAAAACTCTCCTCTCTTCTCTTCTTTGTAAATTTAAATAATATGATGCAAGGAAGAGTATGCAGGGCAGTATTTAATTTACTCTATTAGTTTAATGATTTTGTGTACTGCTAAATGTTAAGGAAGAAGCAATTCGACCCTGGGAAATGATTCTGTATATAAAATATTTGGGACATAGACATTTGAATGTGTACAATGACAGTTTCTACACATTCCAAAAATTATTTTGATATATACATTTCTTTATGAGTGGGTTTGAATGTTTTTATAATTGGGTTTGGGTATGTTTATGGTTTTTGGTTAGATTTTGGGTGATTTTATTAGGTTTTAGTTGGTTTTGGGTGTCTGTTTGGGATGGCTTGTGAGAAGTGCTT

mRNA sequence

AAAGAATTCACTAGATTTACAATCCTACCCCTGCAACTTTCCCTCAGTCCACAACCAAAGAATGAGCGTTTAAGTCATTTCTTATCCACCCATTCTCCACCACAATCCAATTCCACATACTTAAATGACTAAAACACTCCTAGCATTTGCCGCATCTCTCCCAAATCTCAAGGATAACATCGTAAATCCATCAACCTCCTCCCTCCACGTCTTGTCCTGCAACTTCGCTTCACTTACTCCTCCGCCATTTCTGAACCTTTTCCCAATCTCTCTCTCTCTCCTCCATGGCTTTGCATTTCTCTCTCTCCCCGCCGTCGGTCAGATCGTCGCCGTCGTTTCCCTGCAGTGGAAGGCAGCCGATCCCCGCACTTTCCGACTCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTGTCTCTAGTAGCAGAAGCATTGGTGTTTCCGGTGGGAATCGGTCCTTCAAGTTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCAAAGTCACTGAGGTCAACAAGGACACTTTCTGGCCCATTGTCAATGCCGCCGGTGATAAAACCGTTGTGCTCGACATGTACACCCAATGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGACTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAAGATAAGAAGGTCGTTAAAGAAGTAACCGGAGCAAAGTTCGATGATTTGGTTCATGCCATTGATACTGTAAGATCCAGCTGAAAACTCTCCTCTCTTCTCTTCTTTGTAAATTTAAATAATATGATGCAAGGAAGAGTATGCAGGGCAGTATTTAATTTACTCTATTAGTTTAATGATTTTGTGTACTGCTAAATGTTAAGGAAGAAGCAATTCGACCCTGGGAAATGATTCTGTATATAAAATATTTGGGACATAGACATTTGAATGTGTACAATGACAGTTTCTACACATTCCAAAAATTATTTTGATATATACATTTCTTTATGAGTGGGTTTGAATGTTTTTATAATTGGGTTTGGGTATGTTTATGGTTTTTGGTTAGATTTTGGGTGATTTTATTAGGTTTTAGTTGGTTTTGGGTGTCTGTTTGGGATGGCTTGTGAGAAGTGCTT

Coding sequence (CDS)

ATGGCTTTGCATTTCTCTCTCTCCCCGCCGTCGGTCAGATCGTCGCCGTCGTTTCCCTGCAGTGGAAGGCAGCCGATCCCCGCACTTTCCGACTCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTGTCTCTAGTAGCAGAAGCATTGGTGTTTCCGGTGGGAATCGGTCCTTCAAGTTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCAAAGTCACTGAGGTCAACAAGGACACTTTCTGGCCCATTGTCAATGCCGCCGGTGATAAAACCGTTGTGCTCGACATGTACACCCAATGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGACTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAAGATAAGAAGGTCGTTAAAGAAGTAACCGGAGCAAAGTTCGATGATTTGGTTCATGCCATTGATACTGTAAGATCCAGCTGA

Protein sequence

MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFKFNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS

Homology

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BLAST of IVF0001917 vs. ExPASy Swiss-Prot
Match: P29450 (Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.2e-54
Identity = 121/186 (65.05%), Postives = 140/186 (75.27%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVS----GGN 60
           MAL+   SP  + ++     S  +P  A S S     +S S S+  S+ +G+       +
Sbjct: 1   MALNLCTSPKWIGTTVFDSASSSKPSLASSFST----TSFSSSILCSKRVGLQRLSLRRS 60

Query: 61  RSFKFNSSLETAG--ATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKF 120
            S    SSLETAG   TVGKVTEVNKDTFWPIVNAAGDKTVVLDM+T+WCGPCKV+AP +
Sbjct: 61  ISVSVRSSLETAGPTVTVGKVTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLY 120

Query: 121 QDLSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAI 180
           ++LS+KYLDVVFLKLDCNQDNK LAKELGIKVVPTFKILKD K+VKEVTGAKFDDLV AI
Sbjct: 121 EELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAI 180

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BLAST of IVF0001917 vs. ExPASy Swiss-Prot
Match: Q9XFH8 (Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 2.1e-49
Identity = 94/117 (80.34%), Postives = 106/117 (90.60%), Query Frame = 0


Query: 64  SLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLD 123
           SLET   +VG+VTEV+KDTFWPIV AAG+K VVLDMYTQWCGPCKV+APK++ LSEKY D
Sbjct: 59  SLETVNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDD 118

Query: 124 VVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 181
           VVFLKLDCN DN+PLAKELGI+VVPTFKILKD KVVKEVTGAK+DDLV AI+T RS+
Sbjct: 119 VVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETARSA 175

[Close]

BLAST of IVF0001917 vs. ExPASy Swiss-Prot
Match: Q9XFH9 (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.5e-49
Identity = 112/188 (59.57%), Postives = 131/188 (69.68%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSP--SFPCSGRQPIP-------ALSDSKSGCFSSRSLSVSSSRSIG 60
           ++L  + SP S R SP  S    G  P+        +   +K G  S     + S R IG
Sbjct: 3   LSLRLAPSPTSFRYSPITSTGAGGFSPVKQHCRIPNSGVATKIGFCSGGGGVLDSGRRIG 62

Query: 61  VSGGNRSFKFNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMA 120
                 S     SLET   TVG+VTEV+KDTFWPIV AAGDK VVLDMYTQWCGPCKV+A
Sbjct: 63  ------SCVVRCSLETVNVTVGQVTEVDKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIA 122

Query: 121 PKFQDLSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLV 180
           PK+++LSEKY D+VFLKLDCNQDNKPLAKELGI+VVPTFKILKD KVVKEVTGAK++DL+
Sbjct: 123 PKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLL 182

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BLAST of IVF0001917 vs. ExPASy Swiss-Prot
Match: Q8S091 (Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0913000 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.6e-48
Identity = 93/113 (82.30%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 68  AGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFL 127
           A A  G+VTEVNKDTFWPIV +AG K VVLDMYTQWCGPCKVMAPKFQ++SEK  DVVFL
Sbjct: 75  AVAVTGQVTEVNKDTFWPIVKSAGPKVVVLDMYTQWCGPCKVMAPKFQEMSEKDQDVVFL 134

Query: 128 KLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 181
           KLDCNQDNK LAKELGIKVVPTFKILKD KVVKEVTGAK D+L+ AI+TV+SS
Sbjct: 135 KLDCNQDNKSLAKELGIKVVPTFKILKDGKVVKEVTGAKLDELIQAIETVKSS 187

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BLAST of IVF0001917 vs. ExPASy Swiss-Prot
Match: O48897 (Thioredoxin F-type, chloroplastic OS=Brassica napus OX=3708 GN=TRXF PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.3e-47
Identity = 108/179 (60.34%), Postives = 131/179 (73.18%), Query Frame = 0


Query: 9   PPSVRSSPSFPCSGRQPIPALSDSKSGC-FSSRSLSVSSSRSIG------VSGGNRSFKF 68
           P S+R +PS P +        S +K  C   S S   +++R IG      V  G+ S   
Sbjct: 2   PLSLRLAPS-PTALSPTTGGFSPAKKQCRIPSYSGVATTTRRIGLCSLDYVKRGDSSV-V 61

Query: 69  NSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKY 128
             SL+T   +VG+VTEV+KDTFWPIV AAG+K VVLDMYTQWCGPCKV+APK++ LSEKY
Sbjct: 62  RCSLQTVNVSVGQVTEVDKDTFWPIVKAAGEKIVVLDMYTQWCGPCKVIAPKYKALSEKY 121

Query: 129 LDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 181
            DVVFLKLDCN +N+PLAKELGI+VVPTFKILKD +VVKEVTGAK+DDLV AI+T RS+
Sbjct: 122 EDVVFLKLDCNPENRPLAKELGIRVVPTFKILKDNQVVKEVTGAKYDDLVAAIETARSA 178

[Close]

BLAST of IVF0001917 vs. ExPASy TrEMBL
Match: A0A1S3B9B3 (thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60
           MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK
Sbjct: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60

Query: 61  FNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120
            NSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK
Sbjct: 61  VNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180

[Close]

BLAST of IVF0001917 vs. ExPASy TrEMBL
Match: A0A0A0M340 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G651650 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.4e-87
Identity = 169/180 (93.89%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60
           MALHFSLSPPSVRSSPSFPCSGRQPI  LS+SKSGCFSSRSLS+SSSRSIGVSG N SFK
Sbjct: 1   MALHFSLSPPSVRSSPSFPCSGRQPIATLSESKSGCFSSRSLSLSSSRSIGVSGRNGSFK 60

Query: 61  FNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120
            NSSLETAGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK
Sbjct: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCN DNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFD+LVHAID VRSS
Sbjct: 121 YLDVVFLKLDCNIDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 180

[Close]

BLAST of IVF0001917 vs. ExPASy TrEMBL
Match: A0A6J1DTK2 (thioredoxin F-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111023873 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84
Identity = 161/180 (89.44%), Postives = 172/180 (95.56%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60
           MAL  SLSPPS+RSSPS PC+G+QPI A+SDSKS CFSSRSLSV+SSRSIG+SGGNR+FK
Sbjct: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60

Query: 61  FNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120
            NSSLETAGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQ+LSEK
Sbjct: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFDDLVHAI+ VRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180

[Close]

BLAST of IVF0001917 vs. ExPASy TrEMBL
Match: A0A6J1JM96 (thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111485679 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.5e-84
Identity = 164/180 (91.11%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60
           MAL  SLSPPS+RSSPS PCSGRQPI ALSD+KSGCFSS+ LSV+SSRSIGVS GNRSFK
Sbjct: 1   MALRISLSPPSIRSSPSLPCSGRQPIAALSDAKSGCFSSKRLSVTSSRSIGVSSGNRSFK 60

Query: 61  FNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120
            NSSLETAGATVG VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEK
Sbjct: 61  INSSLETAGATVGTVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVK VTGAKFDDLV AID VRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKVVTGAKFDDLVLAIDAVRSS 180

[Close]

BLAST of IVF0001917 vs. ExPASy TrEMBL
Match: A0A6J1HAM5 (thioredoxin F-type, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461638 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 163/180 (90.56%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60
           MAL  SLSPPS+RSSPS PCSGRQPI AL D+KSGCFSS+ LSV+SSRSIGVS GNRSFK
Sbjct: 1   MALRISLSPPSIRSSPSLPCSGRQPIAALPDAKSGCFSSKRLSVTSSRSIGVSSGNRSFK 60

Query: 61  FNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120
            NSSLE AGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEK
Sbjct: 61  INSSLEIAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVK VTGAKFDDLV AID VRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKVVTGAKFDDLVLAIDAVRSS 180

[Close]

BLAST of IVF0001917 vs. NCBI nr
Match: XP_008443649.1 (PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo])

HSP 1 Score: 349 bits (896), Expect = 3.78e-121
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60
           MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK
Sbjct: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60

Query: 61  FNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120
            NSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK
Sbjct: 61  VNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180

[Close]

BLAST of IVF0001917 vs. NCBI nr
Match: XP_004139092.1 (thioredoxin F-type, chloroplastic [Cucumis sativus] >KGN66631.1 hypothetical protein Csa_007307 [Cucumis sativus])

HSP 1 Score: 328 bits (841), Expect = 9.19e-113
Identity = 169/180 (93.89%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60
           MALHFSLSPPSVRSSPSFPCSGRQPI  LS+SKSGCFSSRSLS+SSSRSIGVSG N SFK
Sbjct: 1   MALHFSLSPPSVRSSPSFPCSGRQPIATLSESKSGCFSSRSLSLSSSRSIGVSGRNGSFK 60

Query: 61  FNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120
            NSSLETAGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK
Sbjct: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCN DNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFD+LVHAID VRSS
Sbjct: 121 YLDVVFLKLDCNIDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 180

[Close]

BLAST of IVF0001917 vs. NCBI nr
Match: XP_038878300.1 (thioredoxin F-type, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 330 bits (846), Expect = 1.16e-112
Identity = 169/180 (93.89%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60
           MALH SLSPPSVRSSPSFPCSGRQ I ALSDSKSGCFSS+SLS++SSRSIGVS GNRSFK
Sbjct: 58  MALHLSLSPPSVRSSPSFPCSGRQSIAALSDSKSGCFSSKSLSITSSRSIGVSSGNRSFK 117

Query: 61  FNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120
            NSSLE AGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEK
Sbjct: 118 VNSSLEIAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 177

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFDDLVHAIDTVRSS
Sbjct: 178 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 237

[Close]

BLAST of IVF0001917 vs. NCBI nr
Match: XP_022157062.1 (thioredoxin F-type, chloroplastic-like [Momordica charantia])

HSP 1 Score: 319 bits (818), Expect = 2.95e-109
Identity = 161/180 (89.44%), Postives = 172/180 (95.56%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60
           MAL  SLSPPS+RSSPS PC+G+QPI A+SDSKS CFSSRSLSV+SSRSIG+SGGNR+FK
Sbjct: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60

Query: 61  FNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120
            NSSLETAGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQ+LSEK
Sbjct: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFDDLVHAI+ VRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180

[Close]

BLAST of IVF0001917 vs. NCBI nr
Match: XP_022988428.1 (thioredoxin F-type, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 318 bits (815), Expect = 8.44e-109
Identity = 164/180 (91.11%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60
           MAL  SLSPPS+RSSPS PCSGRQPI ALSD+KSGCFSS+ LSV+SSRSIGVS GNRSFK
Sbjct: 1   MALRISLSPPSIRSSPSLPCSGRQPIAALSDAKSGCFSSKRLSVTSSRSIGVSSGNRSFK 60

Query: 61  FNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120
            NSSLETAGATVG VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEK
Sbjct: 61  INSSLETAGATVGTVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVK VTGAKFDDLV AID VRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKVVTGAKFDDLVLAIDAVRSS 180

[Close]

BLAST of IVF0001917 vs. TAIR 10
Match: AT3G02730.1 (thioredoxin F-type 1 )

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-50
Identity = 94/117 (80.34%), Postives = 106/117 (90.60%), Query Frame = 0


Query: 64  SLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLD 123
           SLET   +VG+VTEV+KDTFWPIV AAG+K VVLDMYTQWCGPCKV+APK++ LSEKY D
Sbjct: 59  SLETVNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDD 118

Query: 124 VVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 181
           VVFLKLDCN DN+PLAKELGI+VVPTFKILKD KVVKEVTGAK+DDLV AI+T RS+
Sbjct: 119 VVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETARSA 175

[Close]

BLAST of IVF0001917 vs. TAIR 10
Match: AT5G16400.1 (thioredoxin F2 )

HSP 1 Score: 196.1 bits (497), Expect = 2.5e-50
Identity = 112/188 (59.57%), Postives = 131/188 (69.68%), Query Frame = 0


Query: 1   MALHFSLSPPSVRSSP--SFPCSGRQPIP-------ALSDSKSGCFSSRSLSVSSSRSIG 60
           ++L  + SP S R SP  S    G  P+        +   +K G  S     + S R IG
Sbjct: 3   LSLRLAPSPTSFRYSPITSTGAGGFSPVKQHCRIPNSGVATKIGFCSGGGGVLDSGRRIG 62

Query: 61  VSGGNRSFKFNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMA 120
                 S     SLET   TVG+VTEV+KDTFWPIV AAGDK VVLDMYTQWCGPCKV+A
Sbjct: 63  ------SCVVRCSLETVNVTVGQVTEVDKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIA 122

Query: 121 PKFQDLSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLV 180
           PK+++LSEKY D+VFLKLDCNQDNKPLAKELGI+VVPTFKILKD KVVKEVTGAK++DL+
Sbjct: 123 PKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLL 182

[Close]

BLAST of IVF0001917 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-13
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 95  VVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILK 154
           VV+D    WCGPC+ +AP F DL++K  +V+FLK+D   + K +A +  I+ +PTF  LK
Sbjct: 31  VVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD-TDELKSVASDWAIQAMPTFMFLK 90

Query: 155 DKKVVKEVTGAKFDDLVHAI 175
           + K++ +V GAK D+L   I
Sbjct: 91  EGKILDKVVGAKKDELQSTI 109

[Close]

BLAST of IVF0001917 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 69.7 bits (169), Expect = 2.7e-12
Identity = 30/79 (37.97%), Postives = 54/79 (68.35%), Query Frame = 0


Query: 93  KTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKI 152
           K +V+D    WC PC+ +AP F DL++K+LDVVF K+D ++ N  +A+E  ++ +PTF  
Sbjct: 28  KLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELN-TVAEEFKVQAMPTFIF 87

Query: 153 LKDKKVVKEVTGAKFDDLV 172
           +K+ ++ + V GA  ++++
Sbjct: 88  MKEGEIKETVVGAAKEEII 105

[Close]

BLAST of IVF0001917 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 68.2 bits (165), Expect = 7.9e-12
Identity = 30/88 (34.09%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 92  DKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFK 151
           +K +V+D    WCGPC+++ P    +++K+ DV F+KLD + +   +AKE  +  +PTF 
Sbjct: 47  NKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVD-ELPDVAKEFNVTAMPTFV 106

Query: 152 ILKDKKVVKEVTGAKFDDLVHAIDTVRS 180
           ++K  K ++ + GAK D+L   +  +R+
Sbjct: 107 LVKRGKEIERIIGAKKDELEKKVSKLRA 133

The following BLAST results are available for this feature:

BLAST of IVF0001917 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29450	6.2e-54	65.05	Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9XFH8	2.1e-49	80.34	Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 ...	[more]
Q9XFH9	3.5e-49	59.57	Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 ...	[more]
Q8S091	6.6e-48	82.30	Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09...	[more]
O48897	7.3e-47	60.34	Thioredoxin F-type, chloroplastic OS=Brassica napus OX=3708 GN=TRXF PE=2 SV=1	[more]

BLAST of IVF0001917 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9B3	1.4e-93	99.44	thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 P...	[more]
A0A0A0M340	3.4e-87	93.89	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G651650...	[more]
A0A6J1DTK2	1.6e-84	89.44	thioredoxin F-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1JM96	3.5e-84	91.11	thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114856...	[more]
A0A6J1HAM5	1.3e-83	90.56	thioredoxin F-type, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]

BLAST of IVF0001917 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443649.1	3.78e-121	99.44	PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo]	[more]
XP_004139092.1	9.19e-113	93.89	thioredoxin F-type, chloroplastic [Cucumis sativus] >KGN66631.1 hypothetical pro...	[more]
XP_038878300.1	1.16e-112	93.89	thioredoxin F-type, chloroplastic-like [Benincasa hispida]	[more]
XP_022157062.1	2.95e-109	89.44	thioredoxin F-type, chloroplastic-like [Momordica charantia]	[more]
XP_022988428.1	8.44e-109	91.11	thioredoxin F-type, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of IVF0001917 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02730.1	1.5e-50	80.34	thioredoxin F-type 1	[more]
AT5G16400.1	2.5e-50	59.57	thioredoxin F2	[more]
AT3G51030.1	3.2e-13	43.75	thioredoxin H-type 1	[more]
AT5G42980.1	2.7e-12	37.97	thioredoxin 3	[more]
AT5G39950.1	7.9e-12	34.09	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 143..154 score: 33.89 coord: 95..103 score: 31.23 coord: 103..112 score: 65.5
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 59..179 e-value: 1.9E-35 score: 123.1
None	No IPR available	PIRSR	PIRSR000077-4	PIRSR000077-4	coord: 74..167 e-value: 9.8E-17 score: 58.8
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..180
None	No IPR available	PANTHER	PTHR10438:SF382	THIOREDOXIN F2, CHLOROPLASTIC	coord: 1..180
None	No IPR available	CDD	cd02947	TRX_family	coord: 81..175 e-value: 2.13701E-26 score: 94.5472
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 75..175 e-value: 6.9E-23 score: 80.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 64..179 score: 12.640814
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 96..114
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 68..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001917.2	IVF0001917.2	mRNA