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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATTGGGCTGGTCGGGCGTCGGCGGAACACTGGGTTGGCCGACCGTCGACGGAAGACTGGGCTTGGCGTTGGTGGAACAATCGAAACACTCGGACGTCGGCGGCTTGGCGTCCGCGGAAGAATGGGATTTTTACAGGTCGCGCGTCGGGCGGCTTCGTCTGCGAAAGAATCAGAAACCTAGTCTCCTCGTCACCAGCTTTGCGTCTGCGGAAGAATGAAGCTTGTAGTCGTGGTCGACCGTTGGCGGAAGAATGGGAAGACCAGGTCGCGCAGGTCTAG mRNA sequence ATGGATTGGGCTGGTCGGGCGTCGGCGGAACACTGGGTTGGCCGACCGTCGACGGAAGACTGGGCTTGGCGTTGGTGGAACAATCGAAACACTCGGACGTCGGCGGCTTGGCGTCCGCGGAAGAATGGGATTTTTACAGGTCGCGCGTCGGGCGGCTTCGTCTGCGAAAGAATCAGAAACCTAGTCTCCTCGTCACCAGCTTTGCGTCTGCGGAAGAATGAAGCTTGTAGTCGTGGTCGACCGTTGGCGGAAGAATGGGAAGACCAGGTCGCGCAGGTCTAG Coding sequence (CDS) ATGGATTGGGCTGGTCGGGCGTCGGCGGAACACTGGGTTGGCCGACCGTCGACGGAAGACTGGGCTTGGCGTTGGTGGAACAATCGAAACACTCGGACGTCGGCGGCTTGGCGTCCGCGGAAGAATGGGATTTTTACAGGTCGCGCGTCGGGCGGCTTCGTCTGCGAAAGAATCAGAAACCTAGTCTCCTCGTCACCAGCTTTGCGTCTGCGGAAGAATGAAGCTTGTAGTCGTGGTCGACCGTTGGCGGAAGAATGGGAAGACCAGGTCGCGCAGGTCTAG Protein sequence MDWAGRASAEHWVGRPSTEDWAWRWWNNRNTRTSAAWRPRKNGIFTGRASGGFVCERIRNLVSSSPALRLRKNEACSRGRPLAEEWEDQVAQV
Homology
BLAST of IVF0001897 vs. ExPASy TrEMBL
Match: A0A5D3DJ36 (Putative prefoldin subunit 5 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00470 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 7.5e-06 Identity = 37/93 (39.78%), Postives = 46/93 (49.46%), Query Frame = 0
Query: 2 DWAGRASAEHWVGRPSTEDWAWRWWNNRNTRTSAAWRPRK-----NGIFTGRAS--GGFV 61
DWAGRAS EHW GRPS EDWAWR NN+NTR A + G+ + S GGF
Sbjct: 150 DWAGRASVEHWAGRPSAEDWAWRRRNNQNTRLVYATEESEEWSGVGGLASAEESGVGGFT 209
Query: 62 CERIRNLVSSSPALRLRKNEACSRGRPLAEEWE 88
+ + A + + S L +EWE
Sbjct: 210 SAEESAVSGLASAEESKDYWSASATWRLRKEWE 242
BLAST of IVF0001897 vs. NCBI nr
Match: TYK23681.1 (putative prefoldin subunit 5 isoform X3 [Cucumis melo var. makuwa]) HSP 1 Score: 61.2 bits (147), Expect = 1.05e-08 Identity = 37/93 (39.78%), Postives = 46/93 (49.46%), Query Frame = 0
Query: 2 DWAGRASAEHWVGRPSTEDWAWRWWNNRNTRTSAAWRPRKN-----GIFTGRASG--GFV 61
DWAGRAS EHW GRPS EDWAWR NN+NTR A + G+ + SG GF
Sbjct: 150 DWAGRASVEHWAGRPSAEDWAWRRRNNQNTRLVYATEESEEWSGVGGLASAEESGVGGFT 209
Query: 62 CERIRNLVSSSPALRLRKNEACSRGRPLAEEWE 87
+ + A + + S L +EWE
Sbjct: 210 SAEESAVSGLASAEESKDYWSASATWRLRKEWE 242
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DJ36 | 7.5e-06 | 39.78 | Putative prefoldin subunit 5 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK23681.1 | 1.05e-08 | 39.78 | putative prefoldin subunit 5 isoform X3 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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