IVF0001851 (gene) Melon (IVF77) v1

Overview


Name	IVF0001851
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	WPP domain-associated protein
Location	chr10: 282524 .. 283045 (+)
RNA-Seq Expression	IVF0001851
Synteny	IVF0001851

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCATACTTTGGATCCACTGCCTCAAGCCATGGCTTCTTTGCAAGAAAATAAATCACTTTATAAGAAGGCCTTCATCAGAAGATGTCAAAATCTCAGAAAAGCTGAAAATGAGGTTCTGTTCTCAATTTCTAATAATACTGATGCTTTTCACTCGTTGTACAGCCAAGTTTGAGAATAATTTTGTCATTTGGTTGTTTTTCCACATTTCCTATTTGATATCCATTAGGTGGATATTTTAGGGGATCAAGTGGATATACTTCTTAGCTTGATTGAGAAGATATACTCGATTCTAAATCAACAATCACCAGCTTTGCAGCAATATTTTGATGTAATATCTCTGAACGTCTGTTTTCTTTTTTCTCATATTATTTTTTACCAATCTCATAGCAAATAACTTTGCATTAAACTTAGCTGTTATCTTTTTATCAATGTGCAGGTCTCGGAAATTCTTAGGTCAATCGAGGAGGAGGTACCGGTAATTGTTTGTACACCACCTGAAAAGTTAGATACAATCTGA

mRNA sequence

ATGAAGCATACTTTGGATCCACTGCCTCAAGCCATGGCTTCTTTGCAAGAAAATAAATCACTTTATAAGAAGGCCTTCATCAGAAGATGTCAAAATCTCAGAAAAGCTGAAAATGAGGTTCTGTTCTCAATTTCTAATAATACTGATGCTTTTCACTCGTTGTACAGCCAAGTGGATATTTTAGGGGATCAAGTGGATATACTTCTTAGCTTGATTGAGAAGATATACTCGATTCTAAATCAACAATCACCAGCTTTGCAGCAATATTTTGATGTCTCGGAAATTCTTAGGTCAATCGAGGAGGAGGTACCGGTAATTGTTTGTACACCACCTGAAAAGTTAGATACAATCTGA

Coding sequence (CDS)

ATGAAGCATACTTTGGATCCACTGCCTCAAGCCATGGCTTCTTTGCAAGAAAATAAATCACTTTATAAGAAGGCCTTCATCAGAAGATGTCAAAATCTCAGAAAAGCTGAAAATGAGGTTCTGTTCTCAATTTCTAATAATACTGATGCTTTTCACTCGTTGTACAGCCAAGTGGATATTTTAGGGGATCAAGTGGATATACTTCTTAGCTTGATTGAGAAGATATACTCGATTCTAAATCAACAATCACCAGCTTTGCAGCAATATTTTGATGTCTCGGAAATTCTTAGGTCAATCGAGGAGGAGGTACCGGTAATTGTTTGTACACCACCTGAAAAGTTAGATACAATCTGA

Protein sequence

MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDILGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEVPVIVCTPPEKLDTI

Homology

[Close]

BLAST of IVF0001851 vs. ExPASy Swiss-Prot
Match: O64584 (WPP domain-associated protein OS=Arabidopsis thaliana OX=3702 GN=WAP PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 8.2e-07
Identity = 34/103 (33.01%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           M+  L  L   +  ++   S YK+   ++C +L+KAE                  ++VD+
Sbjct: 732 MQSQLSDLSHQINEVKGKASTYKQRLEKKCCDLKKAE------------------AEVDL 791

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEV 104
           LGD+V+ LL L+EKIY  L+  SP L+ Y  + EILR +  E+
Sbjct: 792 LGDEVETLLDLLEKIYIALDHYSPILKHYPGIIEILRLVRREL 816

[Close]

BLAST of IVF0001851 vs. ExPASy Swiss-Prot
Match: Q5BQN5 (WPP domain-associated protein (Fragment) OS=Solanum lycopersicum OX=4081 GN=WAP PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.0e-05
Identity = 31/85 (36.47%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 5   LDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDILGDQ 64
           +D L +    L+    LY++   +RC +L+ AE                  ++VD+LGD+
Sbjct: 761 MDCLVKKANLLRRTTLLYQQRLEKRCSDLKLAE------------------AEVDLLGDE 820

Query: 65  VDILLSLIEKIYSILNQQSPALQQY 90
           VD LLSL+EKIY  L+  SP LQ Y
Sbjct: 821 VDTLLSLVEKIYIALDHYSPVLQHY 827

[Close]

BLAST of IVF0001851 vs. ExPASy TrEMBL
Match: A0A0A0KRK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623390 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52
Identity = 111/116 (95.69%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           MKHTLDPLPQ MASLQENKSLYKKAFIRRCQNLRKAENEVLFS SNNTDAFHSLYSQVDI
Sbjct: 1   MKHTLDPLPQVMASLQENKSLYKKAFIRRCQNLRKAENEVLFSTSNNTDAFHSLYSQVDI 60

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEVPVIVCTPPEKLDT 117
           LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSI EEVPVI CTPP KLDT
Sbjct: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIAEEVPVIACTPPVKLDT 116

[Close]

BLAST of IVF0001851 vs. ExPASy TrEMBL
Match: A0A5D3CG51 (WPP domain-associated protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002740 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.4e-40
Identity = 99/122 (81.15%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENE                  VDI
Sbjct: 585 MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENE------------------VDI 644

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFD-----VSEILRSIEEEVPVIVCTPPEKLD 118
           LGDQVDILLSLIEKIYSILNQQSPALQQYFD     VSEILRSIEEEVPVIVCTPPEKLD
Sbjct: 645 LGDQVDILLSLIEKIYSILNQQSPALQQYFDVISLNVSEILRSIEEEVPVIVCTPPEKLD 688

[Close]

BLAST of IVF0001851 vs. ExPASy TrEMBL
Match: A0A6J1JCB6 (uncharacterized protein LOC111483104 OS=Cucurbita maxima OX=3661 GN=LOC111483104 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29
Identity = 79/116 (68.10%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           MKHTL PLPQ MASL+E++SLYKKAFIRRCQNLRKAENE                  VD+
Sbjct: 867 MKHTLYPLPQVMASLRESESLYKKAFIRRCQNLRKAENE------------------VDL 926

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEVPVIVCTPPEKLDT 117
           LGDQVDILL LIEK+Y ILNQQSP LQQY DVSEILR I+E+V V+  TPP+KLDT
Sbjct: 927 LGDQVDILLRLIEKVYLILNQQSPVLQQYSDVSEILRLIKEQVAVL-STPPKKLDT 963

[Close]

BLAST of IVF0001851 vs. ExPASy TrEMBL
Match: A0A6J1GZ55 (uncharacterized protein LOC111458475 OS=Cucurbita moschata OX=3662 GN=LOC111458475 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.7e-29
Identity = 79/116 (68.10%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           MKHTL PLPQ MASL+E++SLYKKAFIRRCQNLRKAENE                  VD+
Sbjct: 860 MKHTLYPLPQVMASLRESESLYKKAFIRRCQNLRKAENE------------------VDL 919

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEVPVIVCTPPEKLDT 117
           LGDQVDILL LIEK+Y ILNQQSP LQQY DVSEILR I+E+V V   TPP+KLDT
Sbjct: 920 LGDQVDILLRLIEKVYLILNQQSPVLQQYSDVSEILRLIKEQVAVF-STPPKKLDT 956

[Close]

BLAST of IVF0001851 vs. ExPASy TrEMBL
Match: A0A1S3BGE6 (uncharacterized protein LOC103489567 OS=Cucumis melo OX=3656 GN=LOC103489567 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.8e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQV 59
           MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQV
Sbjct: 585 MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQV 642

[Close]

BLAST of IVF0001851 vs. NCBI nr
Match: KGN52275.1 (hypothetical protein Csa_008323 [Cucumis sativus])

HSP 1 Score: 215 bits (548), Expect = 4.36e-70
Identity = 111/116 (95.69%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           MKHTLDPLPQ MASLQENKSLYKKAFIRRCQNLRKAENEVLFS SNNTDAFHSLYSQVDI
Sbjct: 1   MKHTLDPLPQVMASLQENKSLYKKAFIRRCQNLRKAENEVLFSTSNNTDAFHSLYSQVDI 60

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEVPVIVCTPPEKLDT 116
           LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSI EEVPVI CTPP KLDT
Sbjct: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIAEEVPVIACTPPVKLDT 116

[Close]

BLAST of IVF0001851 vs. NCBI nr
Match: KAA0034726.1 (WPP domain-associated protein isoform X2 [Cucumis melo var. makuwa] >TYK09279.1 WPP domain-associated protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 174 bits (442), Expect = 1.82e-48
Identity = 99/122 (81.15%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEV                  DI
Sbjct: 585 MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEV------------------DI 644

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDV-----SEILRSIEEEVPVIVCTPPEKLD 117
           LGDQVDILLSLIEKIYSILNQQSPALQQYFDV     SEILRSIEEEVPVIVCTPPEKLD
Sbjct: 645 LGDQVDILLSLIEKIYSILNQQSPALQQYFDVISLNVSEILRSIEEEVPVIVCTPPEKLD 688

[Close]

BLAST of IVF0001851 vs. NCBI nr
Match: KAG7031963.1 (WPP domain-associated protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139 bits (349), Expect = 2.76e-35
Identity = 79/116 (68.10%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           MKHTL PLPQ MASL+E++SLYKKAFIRRCQNLRKAENEV                  D+
Sbjct: 860 MKHTLYPLPQVMASLRESESLYKKAFIRRCQNLRKAENEV------------------DL 919

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEVPVIVCTPPEKLDT 116
           LGDQVDILL LIEK+Y ILNQQSP LQQY DVSEILR I+E+V V+  TPP+KLDT
Sbjct: 920 LGDQVDILLRLIEKVYLILNQQSPVLQQYSDVSEILRLIKEQVAVL-STPPKKLDT 956

[Close]

BLAST of IVF0001851 vs. NCBI nr
Match: XP_022985013.1 (uncharacterized protein LOC111483104 [Cucurbita maxima])

HSP 1 Score: 139 bits (349), Expect = 2.77e-35
Identity = 79/116 (68.10%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           MKHTL PLPQ MASL+E++SLYKKAFIRRCQNLRKAENEV                  D+
Sbjct: 867 MKHTLYPLPQVMASLRESESLYKKAFIRRCQNLRKAENEV------------------DL 926

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEVPVIVCTPPEKLDT 116
           LGDQVDILL LIEK+Y ILNQQSP LQQY DVSEILR I+E+V V+  TPP+KLDT
Sbjct: 927 LGDQVDILLRLIEKVYLILNQQSPVLQQYSDVSEILRLIKEQVAVL-STPPKKLDT 963

[Close]

BLAST of IVF0001851 vs. NCBI nr
Match: XP_022956940.1 (uncharacterized protein LOC111458475 [Cucurbita moschata])

HSP 1 Score: 138 bits (347), Expect = 5.14e-35
Identity = 79/116 (68.10%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           MKHTL PLPQ MASL+E++SLYKKAFIRRCQNLRKAENEV                  D+
Sbjct: 860 MKHTLYPLPQVMASLRESESLYKKAFIRRCQNLRKAENEV------------------DL 919

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEVPVIVCTPPEKLDT 116
           LGDQVDILL LIEK+Y ILNQQSP LQQY DVSEILR I+E+V V   TPP+KLDT
Sbjct: 920 LGDQVDILLRLIEKVYLILNQQSPVLQQYSDVSEILRLIKEQVAVF-STPPKKLDT 956

[Close]

BLAST of IVF0001851 vs. TAIR 10
Match: AT2G34730.1 (myosin heavy chain-related )

HSP 1 Score: 54.7 bits (130), Expect = 5.9e-08
Identity = 34/103 (33.01%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 1   MKHTLDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDI 60
           M+  L  L   +  ++   S YK+   ++C +L+KAE                  ++VD+
Sbjct: 732 MQSQLSDLSHQINEVKGKASTYKQRLEKKCCDLKKAE------------------AEVDL 791

Query: 61  LGDQVDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEV 104
           LGD+V+ LL L+EKIY  L+  SP L+ Y  + EILR +  E+
Sbjct: 792 LGDEVETLLDLLEKIYIALDHYSPILKHYPGIIEILRLVRREL 816

[Close]

BLAST of IVF0001851 vs. TAIR 10
Match: AT5G14990.1 (BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to 6001 proteins in 578 species: Archae - 107; Bacteria - 678; Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16; Other Eukaryotes - 2578 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 33/99 (33.33%), Postives = 52/99 (52.53%), Query Frame = 0


Query: 5   LDPLPQAMASLQENKSLYKKAFIRRCQNLRKAENEVLFSISNNTDAFHSLYSQVDILGDQ 64
           +D     +A L++ +S+Y+ AF+ R +NLRKAE E                  VD+LGDQ
Sbjct: 581 IDSTMDFIAELRQRESVYRTAFVLRSENLRKAETE------------------VDLLGDQ 640

Query: 65  VDILLSLIEKIYSILNQQSPALQQYFDVSEILRSIEEEV 104
           VD L+ L++K     +Q    L    D+ EI + I++E+
Sbjct: 641 VDSLVKLLQKTLWTFHQHPLLLCNNSDILEISKMIKKEL 661

The following BLAST results are available for this feature:

BLAST of IVF0001851 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64584	8.2e-07	33.01	WPP domain-associated protein OS=Arabidopsis thaliana OX=3702 GN=WAP PE=1 SV=2	[more]
Q5BQN5	2.0e-05	36.47	WPP domain-associated protein (Fragment) OS=Solanum lycopersicum OX=4081 GN=WAP ...	[more]

BLAST of IVF0001851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRK0	1.3e-52	95.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623390 PE=4 SV=1	[more]
A0A5D3CG51	3.4e-40	81.15	WPP domain-associated protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1JCB6	1.6e-29	68.10	uncharacterized protein LOC111483104 OS=Cucurbita maxima OX=3661 GN=LOC111483104...	[more]
A0A6J1GZ55	2.7e-29	68.10	uncharacterized protein LOC111458475 OS=Cucurbita moschata OX=3662 GN=LOC1114584...	[more]
A0A1S3BGE6	3.8e-23	100.00	uncharacterized protein LOC103489567 OS=Cucumis melo OX=3656 GN=LOC103489567 PE=...	[more]

BLAST of IVF0001851 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52275.1	4.36e-70	95.69	hypothetical protein Csa_008323 [Cucumis sativus]	[more]
KAA0034726.1	1.82e-48	81.15	WPP domain-associated protein isoform X2 [Cucumis melo var. makuwa] >TYK09279.1 ...	[more]
KAG7031963.1	2.76e-35	68.10	WPP domain-associated protein, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_022985013.1	2.77e-35	68.10	uncharacterized protein LOC111483104 [Cucurbita maxima]	[more]
XP_022956940.1	5.14e-35	68.10	uncharacterized protein LOC111458475 [Cucurbita moschata]	[more]

BLAST of IVF0001851 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34730.1	5.9e-08	33.01	myosin heavy chain-related	[more]
AT5G14990.1	1.1e-06	33.33	BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT2...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037490	WPP domain-associated protein	PANTHER	PTHR33883	WPP DOMAIN-ASSOCIATED PROTEIN	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001851.2	IVF0001851.2	mRNA