IVF0001785 (gene) Melon (IVF77) v1

Overview
NameIVF0001785
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L38
Locationchr05: 12681500 .. 12692142 (+)
RNA-Seq ExpressionIVF0001785
SyntenyIVF0001785
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACTCTCTCTACTCTTTGTTTTTCGCGATTCTCTACCTTGTTTTTAATGGCGCCTCTTAATACTCTTGAAATTTCTGTTCAATCCACGTACCCAACTGCTATGTTATTGTTGTTTTATTACTCATGAGCAGCAGCTCTTGGCCTAGTTTTTGTTGTATCCAATTACTGATTTGTTTTCTGTTTAACTCTCATGTTAGAGATCTCTAACTATTTGACATCTCTCGAGCTTGTTTAGATTACTTTTCGAATGTGGAACTTCTCCAACTGTTTAGTGAATTTTTGTTGGATTTTCTTCTTCAACTTTTTAAATAATGTACTAAGAATTTGGTTCTGGCAAGAATTTGGATGATGTTATAATGGGGTGATTGATGGGTCCGTATTATGGTTCCTCGATTATAAAAGGGGGTTTCTCTTTTCTGGAATAAAGAGCGTCATCTTGAAGTGTTCTTCGACATTGTTAATTATCAAGCCATTTGCTGCTGCAAATTATTTGATCGATTTGTTTCTTTTACGTTTCTTTTTGGAAGAAATTGATAAGCCATTTGTAATCCATTAGGATTCTCCATTCATGTACTGATTTTATTTTTCGTCTGAGTAATTCTGTTCCATGTTATCTCTCGTATGTTTGTTTGATAATGTAGTGGGAGCAATCTGTCCAATGTCCTGAAACTTTATTCTTTCTGGCTTTTATTGATTTGTAATGTATTGAATACTTGAACATAGTTGGGGTTTTGTATATTATGAGTTTCATGATCAAGTTTGGTGACCTTCCCAATTAGTTCACGTTGTTTCGAGCATTCCTGTAAAAGCTTGGGTGGTATAAATTTATCAAGCGGCATTATTTCTGCCTCTGATCTTTCCATGAATTGTATACTTCTCTTCAAAGTGTTGATGGAATTGCATTGAAGTTTCAAAACAGTATTGCTGAATCTCCCTTTTGTTTCTCTTGTTGGACAGCCAAAGCAAATCCATGAGATCAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGCTCTGTCAAAATCAAAAGGAGCAAAGATGTAGTCAAGTTTAAGGTTCGCTGTTCCAAGTACCTTTACACGCTCTGCGTCTTTGACTCGGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCACCAGGTATTCTTTTAAGCTCTGTTAAATTTATGTTCAGGATTTGGTCTTGATTGGTTTCAAGAATCCTAATGCTAAATCATATGTGTTTGTTATTTTTTATAATGAATTTAAATTAAAATGTTTTCTTGTTTAACTGCACGCATGTTAATGCGTTTTAATTCCCTATATATTTTTGGTTTAAATTGTTGTAGGTTTGAGTGTGCAAGATCTTTGAAGAAGTAGTGAACGAATTTTGGAGATTTATATGGAAAAACAAGGGCTGAAGGAAACGTTTGCCAGTTATTTTTCTTTCTTATTTTCAATCATCTGCTGTGTTGAATGTTCGGATTTTTATAGGGACGGCTGTTCTTGTCACGAGTAGGAGTTGGACTGAACTTTTAGCGTTTCTTAAATTTTATGAACCGTTCTCAGATTTTGAACTGTTTGAGATTTGTCCATCATTGAATCACAACTTCTATCATCATTTTGGCCCTTTTGTTCTATATTTTAGTTTTTACTAATCAGAAATCGTTAGGCAGCATATGAAATTTTCCATTGGATTTTTCTGGGTAGGTGGATGATAAAAATAAAGGAATACTCTTATTGTTTTTGTTTTCCTAGAATTTTGGATCATTATTTTGCCTTCTATAATTGTGTCTTATTGTTGTTTTTTTTTTGTTAGGATCGTACTTTGAACGTTTATCTATTGATAGTCATGTTTTTTTCACTTTATAATATGGATTTTATATGGAATAATTACGTGGATCACAACTATATGTAAATGGATGCGTAATGAGTGTCCTTTAGCGGATTATTCAACTTATAATTTCTCAATGAACTCCTAGAAGGAGAGTTGTGTCTTGTCAGTGAAATGCCAAAATAGGAGTCTATTAAGTGTAAGAGGCAAAATGATGTTTCACATTTGGACTCATAATCGAGTTATTCTCATATTAGTAATGTTATGACACCTCCAAAATATGGATTTCTCATTTTCTTAGTTTCGAACTTTTCCACCATGTTATGGGCTTGATCCCTGCAAAAAAAAATGAAGGGTACATAGGCAATCTATAGAAAATTTAATTACATTCTAATTTAATAAATGAAAACTACGTAGGCTTCGAGCATTATCTCGAATTTTGCTACAAATTTAAGTTCTCTTTTAGGTCAACATTTACCAATTTTTTTCATATCATTTTTTTGAAAAAAAAAAAGGCTTATTGGAACCGTAGGAGTTCTTTTAAAACTTAATATTAAAATACTGTGTGTTTATCATCTTCATCTTACTTAGGAGCACTTTATCATCTATGTGTGGTGTTTGGCTCACTAACATGAGTTGAGTTGGTTTAGTATATCAATTTATTGTTTAGCTTCCAACTTTTCTTCCTTCCATTGTTTTTAATTGGTTCATTCATTGACCACTGTCATTCACTACCATTGTCACACTTGGAGAATCAACTTTGACGATCATTTTCACACAGACAACTCACAACCACTTTTGACGACAAACTCCCACGATCAATTTTGTGTTTTGATAACCACCTTCGACAAAAACCTCTGATAAAAACCACTTTCAATGGTCAATTTCGATAACCCTTTTTACACGATCAACTTCGACGACTAACTTTGGGGTCCAACAACCTCCTTAGCATGATCAATGCCAATGGCCAATTCTAGACTCCCACAACCACCTCTAACAACAAACTTAGATAAAAACCGCCTTCTATGATCAACTTCGACGACCACATTTGCCGACTAATCTAGGCTCCAACGACAAACTTCATGACCAATTCCAAAATCACTTCCTGTGAGCGACTTTTGGCTTGACAACCATCTACAACTCTAAACTTTGACTAAATCATCTTTGATAATTAATTTCAATGATCAGCTTTAACTTCAGACTCCAACAACCACCTTAACAATAAAGTCTGACGAAAACCAAATTTGCTGATCAAGTTTGATGACAACTACCTCTAAAAATGAATAATAACATTTACCACAGACAACCAACACCGAGGAATACTACCTCTAACGACCGACTTCAACGATAATCAAATTTGGTGGCCAACTTTAACAATCACCTTAAGCAACTAACTCCAACCACCAACTTTGTTGTCCTCCTTCGGTGACTAATTCTATCGACCAACTTGATCAACAATATATTGTAACAAAAAAACTTGGCTAATAAAAGTGTGTTTAAATACAAATGTGAAATTATTGATCTATGGTGTTTAATTGTCGTCTTTTATAATAATTTAATATCGATGATTGTCTGAGATTGATTGGTTATAGACCTACTTATCACAAATATTCAAAATATTCTTAACAACGCTACCACAATCAAAGAAGAGATATTGTTTGCATTTACTTTGTATGACTAACTGAATTAAAATGAAGATTTGTTTTTTAAAGCATTTTTTTTTGCAAGAATTAGTGAAATTGGAAGATTCGGATGTAGAATTTGTTGAAAAGATGTGGTGGCATTCCATTAGCTGCTAAGATGATAAGAAACAGTGACGTTGCAATTTGGGGCACAATTAAATGTCAGATTACGAACTTAGACAATGAATCTGTATAATAAATCGATTTTTTAAAATGTTTTTGTCCAATAGATTTTATATGATTTCAAGTTTGTATCCAATATTGAAAATATATTAAATTAATTGTTATATCATATATAAAATTTAATTTTATGTTTAACAGCTAACATGCCTTATTGGATTTTTTTTGGAAAAATAATCAATGTACCGTTCATTCTTAATTAAATCGATACAAAATTAACTTTTTTTCTCCGATGAAATAAATTAATTTTAAAAAAATTTCAACGTATATGAAACCTATTGGATACGATATAGAGTACTCATGAATATTTATTTGACAAAAATTAAAATTTTATTAATAGAACTCGTAATTTAATATTCAAAATAGTACCATCAATAATAGAAAAACAATATAAACCTTTATAAAACTATCCATTTAGAAATATAAGCAAATCTTTAAATTTGGAATATTTATAAACGTTTCTTAAAATAAAACTAAGCTTAAAAAATAATTTTTCTTACAATAATTTATTTTCTCTATACATTTTATAAAATAATTTAGGAAAATTTTAAAAACGGGTCTTTTCAAAAATATAAAAAAGCGACGAAGTATTTACACTGTATAAAACAATCCCGAAAATGAAAAAAGCCGATTATTTGATTTGGTACATGATCGTTTAGATTTGATTTGGTACACGATCGTTTAGATTTGTTTTTTCAATTCTATCGTTTAATTTGTTACAATTAATTAACCCACGATCGTTTAGATTTGGCTACTCCAAATTTAAACGATTTTTTTTTTCAAAATTTGGTATAAATGATTTTTTTCAATATTCTTTATGCACAATCTTTTAGTTTTGGTTACCTAATCTAAACGTAAAAAAAAAAAGAAGAAAGGCGATATGATGCATGCAGTGAATGAAAAAAAAAGAAAAAGAAGAAAGAGGAAGAAAGACATGCACACACCTAAAAAAAGAGAGAAAAACAAGAAAGACAATAGAAAGAAATAGATTTGGTTACTCAAATCTAAAAAAAAAATTGAAAAAAACCGCAGCTAAAAAAAAGAGTACAGAAGAAAACGATAAAAAATCGCAGAGACGATAAAAAGATGGAAGGACAAAATCGCAGAGACGATAAAAAGATGGAAGGACAAACTTGGAATATTTAAAAATGGCTAAGTTTGTGGGTTTTGTTACACAGGCGTAAATATTTTATTAGTTTGTTATATTTAGGAAAGTTCCCTTTTAAAAAATATTTATAAAGTGGTGTTTAGATTTGATAGAAAAACATTATGTTAAAAAAATATGGTTTTGTTTTTCAAAAATAGAAAAAATCGATAAATTATTGGTTAATTTTCATAAATATAACAAACCACTAAAGTATTTACGGTCCGTGTAACAAATCCATGAAGTTAGCTATTTTTTAAATATTCCAAGTTTTTTCTTCCATCTTTCTTCTCCTCTTCGCTTCGATTTCTTTCTATCGTCTATCATCTTTCTTCTTTTCTTTTTTTTTTCACTGCGATTTCTTTCCATCGTCTTTCTTCTTTTCTTTTTTTTTTCGCTGCGATTTCTTTTCATCATTTTTTTTCCTTTTTTTTTACGTCGTTTAATCTTTTAATCGTCTTTCTTCTTTTCCTCTTCTTTTTTTTTGTTACGATTTTTTCCCATCGTCTTTCTTCTTTTCACTACTACAAAATCTACTTTACTTGACACTAGACACTTTTACATACTTGACGCTTTTGTTAAAAAACGTCAAGTATTGATAATTTTAAAGGAAAAACATCAAGTATAGTCACAAAAAAGCGGAGATTTTACGGAGTTTTTCGGATAATTTTACGCTAACCTTTACTTGACGTTTTTTTTCGCGTCAAGTATAAAGGACATTTTACTTGACGTTGTATTCCTGTCAAGTATTGCGAAACGTTACTTGACACGAAAAAAACGTCAAGTATAGTTTAAAGAAGACAAAATTTCACCAAAATTTTTGAATTATTTTTACTTGACGTTTTGTGTCACGTCAAGTATAGTTGAGATTGTACTTGACGGTTTTGTCGCGTCAAGTATAATGCAGATTTTACCTGACGTTGATTCCGCGTTAAGTATAGTTGACATTTACTTGACGTGGAAATAACGTCAAGTATAGTTAAAATTTTTATTTGATACTTTGAAAATTAATATTTTAAAAATGTAAAATATAAAAATATAAAAATATTAAATATAAAAATATTTTTTATTTCTCTCATTCCATTAAATAAACTTATTAAAATAAATTTATTAAAATAAAATTACTAAAATAAAGTTATTACAATGTTATTAAAATAATCTTATTAAAACAAACTTATTAAAATAAATTTTCCAAAAGAAACTTATTAAAAATTAATTTAGTAGAAGAAATGTATTAAAATAAATTTAGTAAAAAGAAATGTATTAAAATAAATTTAGTAAAAAGAAATTTATTAAAATAATAAAAAAATTTATTAAAAAATTCCCTCCAAAAAACCTTTCATTTTCCCCCTTTTCTCTCCCAAAACCCTTCAATCTCTCTATCTCCACATCTCTCCTTTACCTTACCTTACCCAGCCGTGACTGCCCAAGACGCCAACGACCGCCGTGAAGTCCGATGCCGCCGGAAGACCCATTCGACGCTCGAGTCCCATGCCGCTGAAAACCCACGCTGCGCGAAAACCCCCGCCGTGCGAAGAACCCCGCCGCCGAAGACCACGTCACCGAAGACCTACACCGTCGAAGACCCACGCCGCGCGAACACCTCATTTGCGCGAAGACCCGCGCCGATGACCTGCGTCCCGTTTTCAACCCTTCGTTATCTTGCAGCAACTTTTCGATCACCAATCAACAAGGTTCCGAGCCTTTTCGGTAAGAGTCGGTAAGGATTATTGCTATACTTTCTTTTTCGAATTGGATTTAAGTATTTGAATATTCATATGAGCTATTGGAATTCGTTTGTTGTTCTATTTGGGTATATTACTAACTGTCTGACTAAGATTCAGCAAGGTTGAACACATTTTGTACTAATTCGCACTTGATTAAGATGTCTTAGATCAGTTTTTGAACTGGGAAAGTTTGTTGGGCATAGTTCTGAATTAATTTGGAGTGATTAATTAAGGTTTATGGTGGATTTTGGATAAGTATATTACTTTTGAAAATCCCATGGTGTTGATTAAGGTTGAGATTTATATGATTGTTGAGCTAAATAGTTTCCACATCCCTTCTACAATGTAAATTTTGATAAAGATATGTTTTAGTTAGGTGTAGAGCACTTTTATGATTGCATCGGACAAGACTATTTTATTGTTTGGATCATCTTGAATTTCTGATAATTGGTGGGTATTGTAAACTTTTCTAGATTTGAAATATATCAATAGTTAATACCAACTTAAAAGTAGACATAAATGCCTTGTTTAACGAATCTTGCATTAGAAACTTAGATTAATGGGTGGTGTTGGAAGTAATAAGGATGAATTGGTTCTTGGCTTTTGATATGTTTATTTTTTATAATTTTGTTTTTTTTTTTATCTCCACTTTTGGTTTGAATTGGTTTTGTAACGCCCCAAAATCCGAGAAATTTAAATTTTATTAGCTTAAGGGTAAATTTGGAATTATGAGTGTTATTTAATGAGAAAGTACCTTACCTTATGGAGATTTGATCCCATTGGATATTTGAAAAAAAATAAAAATAAATATATATCTATTTGTCTAAATGTTGGAATTAATGATTGTTTTGGTTGGCCTTAGATTTTATGTAATGGATACTTAATTAATGAGGTTTAAGGATAAAATAAAATAATTATTTGTGAAGGTAAAATAATTGTTTATTTTTGTTGAAAGGGTAAAAGTGATGTGATATGGAGAGAGGGAGAGTTTTGATTGTAAATGGGAGATTTGATGGATTAAATGAAGAGAGCGTACGGGTGGTTGTTTTGGGAGGAAAAAAAAGGGGAAAGAAATAAAAGAAAATGATAATTATTATATTATTATTTTTTGTCATTAAAAGGGGGCATTGGGAAGCGTGGGAGACTATTCATCATCTCCCCCAAGTAAACCCTAACCCTAAATCCCTCCACCCTAGCCGTCGCCGCCGCCCTACTCCAACCGTCGCCGTCGAACGACCATCGCAGGCCAACTTGAGCCGATAACCACTCTTCCAGCCGCGTCGGAGAGCCGTCCAAGCCGAGCCGCCGTGCGTCGAGTGTCATCCGCAAGCATCACGCGCCCGCGTCTTCTCCGCTGTAATCCGCCTTTCCACCGTCGACCACCAGCCAACGCCGCGTCGTCGAAGGTCCGTGTCCAGCGTCTCACCCGCCGCCCGAACTGGATCCGACCCACACGCCGCGTCGTGTTATCGTGTAAAGCCGCCGCCCCCGCGCCGCTCGCACGCTCCGCGCGCCGCTCGCCCGATCGCCAGCCGCGCGTCCGCTCCGCGCCCTAGCCGCGCTAGCGCTCCCGCTCCGCGCCCCAAGCCGTGCCTGCGGGCTCGCTCCACGCCCCAAGCCTCGCCTACGCTGCATTTGTGAGCCGAAATCCTCCCAGCTGAGCCGCTAAGCTCCCTTTTATCCCTGTTTCGACCCACACGTTTCGGTAAGCCTCGGTAGGCCGCTTTTGATTTTTACCTATCCAATTAAGGTAGTTTGACCCTAACTAATTTTGTCGTTGGATTAAACTGACTCAGCTAATTGGAAGCCGAGTTGGGGTTTTGCCCAATAAATTCCAAACCAAGTCCGACCTTAATCTTGGGTAAGTCACCTCAAGTAGGTTTTGGACCAGATTCCCTTGAGGGTAAATTACTAAATTGTGGACTTTTGATCCTTTAGGACTTTCGCCGCTTGGGGGAGCGTGTTGTTACTGCTAGGACTTGTCGAGTAATCTCCGGGTAAGAGATTCTCCTACTAGACCTTCGTTTTACATCAAAGGAACTGCATGTTTGAATTTATGGTTACGTATTGATGATGGCTAAGTACCCGTCTTGGGTTTGTAGAGAGAGAAAGAAAGATAGATTGGTTGTTTTGCCTGCTGATTTACTTTATGGTTAACGTAAATAGTATGTCAATGCTATTGCCTGCGTTCTAGAGACATAGTAGCAGTTGAGGATGACGGAAATGATGTGTTAGGGTTGCTACGTCATGGTTGACGTGTTATAGTATGTATTGATGGAATTATGATATGCATGACAAGTTATGATGTGATTGTTGAGATGTCGTGTGCATGTGATGTGTAGGGTGTATGTTAGCTTCTTATTAGAGTCGTACCTACATGGGTGTCCTTCGGGATCACCACTTTTATGACACAGACATGATGGAGAGACCCGACGGGGTCGCTCTCACTTATGACTGCGTAGTCGACGGGATTACCAGTCTGACATTGACATTGACATATACATGACGTGAGTAGTCCGACGGGACCGCTCGCAGCCCGAACATCTTAGGTATTCCCTTAGGAATTACCATGGACCAGCTTGTCCCTATGGGGGCACATGGTGCACGTGTTCGGGGACGTGCTAGTTCAGGGGTACCACTTTCAGGGCTCTAATAGGGAGTTAACAGACACCTAGTGGGACTAGTAGAAGGTCCCTTACTGAGTATTTTTATGCTCACTCTTTCCATTTCCATTTTTCAGGCAGAGGCAGAGGTAGGAACAAGGGCAAGCTGGCGAGTGACCAGAAGTGATCGTGGTGGGCCATAGGGACACGCTTGCTTCCGCTTGTGTCAAAATTGGGTTTTAGTATTGCATTTCAGTTTTTCTTTTGTTTATTTTATTGGTTATTTTATTTCGTTAAAAGTAGATAGGGCCCGAGTTAGGACTTCGTTTTACGCTTATTTCACAGTTTGTTTGTCAATTATTTTATGTTATTTGAAAACTTGGGGTTTTGACTTATTCTATTTTCAAAACTTTACAACCTTATATGTCCTTTTTTAATAGTAATGACTTCGACTTAGTATAAGGAGTTGGGTCTTTACAGGTTCTTTTTGTTTATTTAATTGGAACTTATTTTCTTAAGAAAATAAACCAAACCATTACAACACTTAGGCTAGATTGGGATTCTTCATGATATATATATTCACACTTTTTAGTTAGTAGTAAGTTGATGTATGCAATTAAATGTTACTTCTTCATGATATATATATTCACAATTTATTGTAGGTACTTATACTCACTCATTATTGATTTAAAGAAGGTTTCAAAGTACGTTTTTGTAGATCCATCTCTTATTTCAGCTGGCCATAGTACTCGAGAGATTAGAACTCGAAACCTTTGTAGTAGATTAATGACTTCCAAACAAGATTAATTGGTTGTTGCTCCTTATAATCCTGAGTAAGTATAATTTTTATCAATTTAAACTTGCATTAGTATGGAAATACTAATTACTTGCATATTTATTTCATTTAGGGATCATTGGTCATTAGTAATTATTAATCCATATGATGATGTGGTGTACCATCTTGATTCCTTGAGAACAAGCTCCCGAGATGATATTAAATACGTAACGAATATGTAAGCTAACTATATTTATGTTTCTTTATTTTTAATCACTAAAGAAATTAGTTCATTTTAATTTATACTATACTTTGGGAAATGTAGGGCCCTGACGATTTTCCAATCTCAGAAGAATTTGAAAAAGACTAGAAAAACAACATTCTGGAAAGCGGTAAAGGTAAATATATTTACAATTTAATTTAGCACATAATCCAATATGCATTGTTATTTGGTTTTGTGTTATAGTGTCCTTTACAGGTAGGAACTGTTGAATGTGGATATTATGTCATGAGATACATGCGCGAAATCGTGAGTAAGGACACAAGCATTATTACTGATGCGGTATGTTTTTAAACTACTTACATTGTAACGTTATAAATACTATAATATGACTATTTTTTTAACAAAGTGTCTACTTGACTTTTTATGTTTTATAGATTGATACAAGAAACTCGTACTCACAGCTTGAATTGAATGAAGTACGAGTGGAGTGA

mRNA sequence

ATGCCAAAGCAAATCCATGAGATCAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGCTCTGTCAAAATCAAAAGGAGCAAAGATGTAGTCAAGTTTAAGGTTCGCTGTTCCAAGTACCTTTACACGCTCTGCGTCTTTGACTCGGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCACCAGCCGTGACTGCCCAAGACGCCAACGACCGCCGTGAAGTCCGATGCCGCCGGAAGACCCATTCGACGCTCGAGTCCCATGCCGCTGAAAACCCACGCTGCGCGAAAACCCCCGCCGTGCGAAGAACCCCGCCGCCGAAGACCACGTCACCGAAGACCTACACCGTCGAAGACCCACGCCGCGCGAACACCTCATTTGCGCGAAGACCCGCGCCGATGACCTGCGTCCCGTTTTCAACCCTTCGTTATCTTGCAGCAACTTTTCGATCACCAATCAACAAGGTTCCGAGCCTTTTCGGTAAGAGTCGGGGGCATTGGGAAGCGTGGGAGACTATTCATCATCTCCCCCAACCGTCGCCGCCGCCCTACTCCAACCGTCGCCGTCGAACGACCATCGCAGGCCAACTTGAGCCGATAACCACTCTTCCAGCCGCGTCGGAGAGCCGTCCAAGCCGAGCCGCCGTGCGTCGAGTGTCATCCGCAAGCATCACGCGCCCGCGTCTTCTCCGCTGTAATCCGCCTTTCCACCGTCGACCACCAGCCAACGCCGCGTCGTCGAAGGTCCGTGTCCAGCGTCTCACCCGCCGCCCGAACTGGATCCGACCCACACGCCGCGTCGTGTTATCGTGTAAAGCCGCCGCCCCCGCGCCGCTCGCACGCTCCGCGCGCCGCTCGCCCGATCGCCAGCCGCGCGACTTTCGCCGCTTGGGGGAGCGTGTTGTTACTGCTAGGACTTGTCGAGTAATCTCCGGCCCGAACATCTTAGGTATTCCCTTAGGAATTACCATGGACCAGCTTGTCCCTATGGGGGCACATGGTGCACGTGTTCGGGGACGTGCTAGTTCAGGGGCAGAGGCAGAGGTAGGAACAAGGGCAAGCTGGCGAGTGACCAGAAGTGATCGTGTAATTATTAATCCATATGATGATGTGGTGTACCATCTTGATTCCTTGAGAACAAGCTCCCGAGATGATATTAAATACGTAACGAATATGGCCCTGACGATTTTCCAATCTCAGAAGAATTTGAAAAAGACTAGAAAAACAACATTCTGGAAAGCGGTAAAGGTAGGAACTGTTGAATGTGGATATTATGTCATGAGATACATGCGCGAAATCGTGAGTAAGGACACAAGCATTATTACTGATGCGATTGATACAAGAAACTCGTACTCACAGCTTGAATTGAATGAAGTACGAGTGGAGTGA

Coding sequence (CDS)

ATGCCAAAGCAAATCCATGAGATCAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGCTCTGTCAAAATCAAAAGGAGCAAAGATGTAGTCAAGTTTAAGGTTCGCTGTTCCAAGTACCTTTACACGCTCTGCGTCTTTGACTCGGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCACCAGCCGTGACTGCCCAAGACGCCAACGACCGCCGTGAAGTCCGATGCCGCCGGAAGACCCATTCGACGCTCGAGTCCCATGCCGCTGAAAACCCACGCTGCGCGAAAACCCCCGCCGTGCGAAGAACCCCGCCGCCGAAGACCACGTCACCGAAGACCTACACCGTCGAAGACCCACGCCGCGCGAACACCTCATTTGCGCGAAGACCCGCGCCGATGACCTGCGTCCCGTTTTCAACCCTTCGTTATCTTGCAGCAACTTTTCGATCACCAATCAACAAGGTTCCGAGCCTTTTCGGTAAGAGTCGGGGGCATTGGGAAGCGTGGGAGACTATTCATCATCTCCCCCAACCGTCGCCGCCGCCCTACTCCAACCGTCGCCGTCGAACGACCATCGCAGGCCAACTTGAGCCGATAACCACTCTTCCAGCCGCGTCGGAGAGCCGTCCAAGCCGAGCCGCCGTGCGTCGAGTGTCATCCGCAAGCATCACGCGCCCGCGTCTTCTCCGCTGTAATCCGCCTTTCCACCGTCGACCACCAGCCAACGCCGCGTCGTCGAAGGTCCGTGTCCAGCGTCTCACCCGCCGCCCGAACTGGATCCGACCCACACGCCGCGTCGTGTTATCGTGTAAAGCCGCCGCCCCCGCGCCGCTCGCACGCTCCGCGCGCCGCTCGCCCGATCGCCAGCCGCGCGACTTTCGCCGCTTGGGGGAGCGTGTTGTTACTGCTAGGACTTGTCGAGTAATCTCCGGCCCGAACATCTTAGGTATTCCCTTAGGAATTACCATGGACCAGCTTGTCCCTATGGGGGCACATGGTGCACGTGTTCGGGGACGTGCTAGTTCAGGGGCAGAGGCAGAGGTAGGAACAAGGGCAAGCTGGCGAGTGACCAGAAGTGATCGTGTAATTATTAATCCATATGATGATGTGGTGTACCATCTTGATTCCTTGAGAACAAGCTCCCGAGATGATATTAAATACGTAACGAATATGGCCCTGACGATTTTCCAATCTCAGAAGAATTTGAAAAAGACTAGAAAAACAACATTCTGGAAAGCGGTAAAGGTAGGAACTGTTGAATGTGGATATTATGTCATGAGATACATGCGCGAAATCGTGAGTAAGGACACAAGCATTATTACTGATGCGATTGATACAAGAAACTCGTACTCACAGCTTGAATTGAATGAAGTACGAGTGGAGTGA

Protein sequence

MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQDANDRREVRCRRKTHSTLESHAAENPRCAKTPAVRRTPPPKTTSPKTYTVEDPRRANTSFARRPAPMTCVPFSTLRYLAATFRSPINKVPSLFGKSRGHWEAWETIHHLPQPSPPPYSNRRRRTTIAGQLEPITTLPAASESRPSRAAVRRVSSASITRPRLLRCNPPFHRRPPANAASSKVRVQRLTRRPNWIRPTRRVVLSCKAAAPAPLARSARRSPDRQPRDFRRLGERVVTARTCRVISGPNILGIPLGITMDQLVPMGAHGARVRGRASSGAEAEVGTRASWRVTRSDRVIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKVGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE
Homology
[Close]
BLAST of IVF0001785 vs. ExPASy Swiss-Prot
Match: O22860 (60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 8.8e-28
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 61 PPAVTAQD 69
          PP ++ QD
Sbjct: 61 PPGLSVQD 68

[Close]
BLAST of IVF0001785 vs. ExPASy Swiss-Prot
Match: P46291 (60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-25
Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDAR+VKIK++KD+VKFKVRCSKYLYTLCV D EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARTVKIKKNKDMVKFKVRCSKYLYTLCVSDFEKADKLKQSL 60

Query: 61 PPAVTAQD 69
          PP ++ QD
Sbjct: 61 PPGLSVQD 68

[Close]
BLAST of IVF0001785 vs. ExPASy Swiss-Prot
Match: Q95V84 (60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 8.5e-23
Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 0 

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKADKLKQSL 60

Query: 61 PPAVTAQD 69
          PP +  ++
Sbjct: 61 PPGLAVKE 68

[Close]
BLAST of IVF0001785 vs. ExPASy Swiss-Prot
Match: Q9JJI8 (60S ribosomal protein L38 OS=Mus musculus OX=10090 GN=Rpl38 PE=1 SV=3)

HSP 1 Score: 104.0 bits (258), Expect = 4.7e-21
Identity = 50/68 (73.53%), Postives = 60/68 (88.24%), Query Frame = 0 

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60
          MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL
Sbjct: 1  MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60

Query: 61 PPAVTAQD 69
          PP +  +D
Sbjct: 61 PPGLAVKD 68

[Close]
BLAST of IVF0001785 vs. ExPASy Swiss-Prot
Match: Q32PB9 (60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4)

HSP 1 Score: 102.4 bits (254), Expect = 1.4e-20
Identity = 49/68 (72.06%), Postives = 60/68 (88.24%), Query Frame = 0 

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60
          MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL
Sbjct: 1  MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60

Query: 61 PPAVTAQD 69
          PP +  ++
Sbjct: 61 PPGLAVKE 68

[Close]
BLAST of IVF0001785 vs. ExPASy TrEMBL
Match: A0A5A7ULI5 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00410 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-44
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 363  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VG 422
            VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK    VG
Sbjct: 1257 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKCHLQVG 1316

Query: 423  TVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE 463
            TVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+EVRVE
Sbjct: 1317 TVECGYYVMRYMREILSKDTSIITDAIDTRNSYSQLELDEVRVE 1360

[Close]
BLAST of IVF0001785 vs. ExPASy TrEMBL
Match: A0A5A7SLX6 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G001270 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-44
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 363 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VG 422
           VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK    VG
Sbjct: 781 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKCPLQVG 840

Query: 423 TVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE 463
           TVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+EVRVE
Sbjct: 841 TVECGYYVMRYMREILSKDTSIITDAIDTRNSYSQLELDEVRVE 884

[Close]
BLAST of IVF0001785 vs. ExPASy TrEMBL
Match: A0A5D3BT71 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00560 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-44
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 363 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VG 422
           VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK    VG
Sbjct: 336 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKCPLQVG 395

Query: 423 TVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE 463
           TVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+EVRVE
Sbjct: 396 TVECGYYVMRYMREILSKDTSIITDAIDTRNSYSQLELDEVRVE 439

[Close]
BLAST of IVF0001785 vs. ExPASy TrEMBL
Match: A0A5A7TSY7 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00640 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-44
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 363 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VG 422
           VIINPYDD+VYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK    VG
Sbjct: 674 VIINPYDDLVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKCPLQVG 733

Query: 423 TVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE 463
           TVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+EVRVE
Sbjct: 734 TVECGYYVMRYMREILSKDTSIITDAIDTRNSYSQLELDEVRVE 777

[Close]
BLAST of IVF0001785 vs. ExPASy TrEMBL
Match: A0A5A7UV64 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001330 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-44
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 363 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VG 422
           VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKT+KTTFWKAVK    VG
Sbjct: 56  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTKKTTFWKAVKCPLQVG 115

Query: 423 TVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE 463
           TVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+EVRVE
Sbjct: 116 TVECGYYVMRYMREILSKDTSIITDAIDTRNSYSQLELDEVRVE 159

[Close]
BLAST of IVF0001785 vs. NCBI nr
Match: KAA0058950.1 (uncharacterized protein E6C27_scaffold98G001330 [Cucumis melo var. makuwa])

HSP 1 Score: 190 bits (483), Expect = 1.11e-54
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 363 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VG 422
           VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKT+KTTFWKAVK    VG
Sbjct: 56  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTKKTTFWKAVKCPLQVG 115

Query: 423 TVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE 462
           TVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+EVRVE
Sbjct: 116 TVECGYYVMRYMREILSKDTSIITDAIDTRNSYSQLELDEVRVE 159

[Close]
BLAST of IVF0001785 vs. NCBI nr
Match: TYK20612.1 (uncharacterized protein E5676_scaffold132G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 183 bits (465), Expect = 1.63e-52
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 363 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKA--VKVGTV 422
           VIINPYDDVVYHL+S RTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWK   +KVGTV
Sbjct: 22  VIINPYDDVVYHLNSSRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKVCPLKVGTV 81

Query: 423 ECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE 462
           ECGYYVMRYMREI+SK+TSIITDAIDTRNSYSQLEL+EVRVE
Sbjct: 82  ECGYYVMRYMREILSKNTSIITDAIDTRNSYSQLELDEVRVE 123

[Close]
BLAST of IVF0001785 vs. NCBI nr
Match: TYK13910.1 (uncharacterized protein E5676_scaffold832G001070 [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (463), Expect = 3.02e-52
Identity = 92/100 (92.00%), Postives = 94/100 (94.00%), Query Frame = 0 

Query: 363 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKVGTVEC 422
           VIINPYDDVVYHLDSLRTSSRDDIKYVTNMAL IFQSQKNLKKTRKTTFWKAVK     C
Sbjct: 22  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALMIFQSQKNLKKTRKTTFWKAVKFPLQVC 81

Query: 423 GYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE 462
           GYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+EVRVE
Sbjct: 82  GYYVMRYMREILSKDTSIITDAIDTRNSYSQLELDEVRVE 121

[Close]
BLAST of IVF0001785 vs. NCBI nr
Match: KAA0053554.1 (uncharacterized protein E6C27_scaffold190G001200 [Cucumis melo var. makuwa] >TYK19149.1 uncharacterized protein E5676_scaffold522G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (461), Expect = 4.20e-52
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 0 

Query: 363 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKVGTVEC 422
           VIINPYDDVVYHL+SLRTSSRDDIKYV NMALTIFQSQKNLKKTRKTTFW  + VGTVEC
Sbjct: 22  VIINPYDDVVYHLNSLRTSSRDDIKYVANMALTIFQSQKNLKKTRKTTFW--IVVGTVEC 81

Query: 423 GYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE 462
           GYYVMRYMREIVSKDTSIITD+IDTRNSYSQLEL+EVRVE
Sbjct: 82  GYYVMRYMREIVSKDTSIITDSIDTRNSYSQLELDEVRVE 119

[Close]
BLAST of IVF0001785 vs. NCBI nr
Match: TYK01269.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 191 bits (486), Expect = 9.76e-52
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 363 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VG 422
           VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK    VG
Sbjct: 336 VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKCPLQVG 395

Query: 423 TVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE 462
           TVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+EVRVE
Sbjct: 396 TVECGYYVMRYMREILSKDTSIITDAIDTRNSYSQLELDEVRVE 439

[Close]
BLAST of IVF0001785 vs. TAIR 10
Match: AT2G43460.1 (Ribosomal L38e protein family )

HSP 1 Score: 126.3 bits (316), Expect = 6.3e-29
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 61 PPAVTAQD 69
          PP ++ QD
Sbjct: 61 PPGLSVQD 68

[Close]
BLAST of IVF0001785 vs. TAIR 10
Match: AT3G59540.1 (Ribosomal L38e protein family )

HSP 1 Score: 126.3 bits (316), Expect = 6.3e-29
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 61 PPAVTAQD 69
          PP ++ QD
Sbjct: 61 PPGLSVQD 68

The following BLAST results are available for this feature:
BLAST of IVF0001785 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O228608.8e-2889.7160S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1[more]
P462911.1e-2585.2960S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1[more]
Q95V848.5e-2377.9460S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1[more]
Q9JJI84.7e-2173.5360S ribosomal protein L38 OS=Mus musculus OX=10090 GN=Rpl38 PE=1 SV=3[more]
Q32PB91.4e-2072.0660S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4[more]
BLAST of IVF0001785 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7ULI51.4e-4494.23ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7SLX61.4e-4494.23Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G001270 P... [more]
A0A5D3BT711.4e-4494.23Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00560 PE=... [more]
A0A5A7TSY73.1e-4493.27ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7UV643.1e-4493.27ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
BLAST of IVF0001785 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058950.11.11e-5493.27uncharacterized protein E6C27_scaffold98G001330 [Cucumis melo var. makuwa][more]
TYK20612.11.63e-5291.18uncharacterized protein E5676_scaffold132G00390 [Cucumis melo var. makuwa][more]
TYK13910.13.02e-5292.00uncharacterized protein E5676_scaffold832G001070 [Cucumis melo var. makuwa][more]
KAA0053554.14.20e-5292.00uncharacterized protein E6C27_scaffold190G001200 [Cucumis melo var. makuwa] >TYK... [more]
TYK01269.19.76e-5294.23transposase [Cucumis melo var. makuwa][more]
BLAST of IVF0001785 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43460.16.3e-2989.71Ribosomal L38e protein family [more]
AT3G59540.16.3e-2989.71Ribosomal L38e protein family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.395.10Adenoviral Proteinase; Chain Acoord: 363..459
e-value: 1.2E-5
score: 26.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..249
NoneNo IPR availablePANTHERPTHR10965:SF1460S RIBOSOMAL PROTEIN L38coord: 1..68
IPR002675Ribosomal protein L38ePFAMPF01781Ribosomal_L38ecoord: 2..66
e-value: 9.8E-31
score: 105.7
IPR002675Ribosomal protein L38ePANTHERPTHR1096560S RIBOSOMAL PROTEIN L38coord: 1..68
IPR038464Ribosomal protein L38e superfamilyGENE3D3.30.720.90coord: 1..69
e-value: 7.0E-33
score: 114.5
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 363..439

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001785.1IVF0001785.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003735 structural constituent of ribosome