IVF0001756 (gene) Melon (IVF77) v1

Overview


Name	IVF0001756
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein SAWADEE HOMEODOMAIN-like protein 2 isoform X1
Location	chr06: 2374676 .. 2380414 (+)
RNA-Seq Expression	IVF0001756
Synteny	IVF0001756

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGCTTCACGGCTTCCGAGGTCCTTTTCCCCCTTCTTATTCTTCTTCTTTTAGTTGTTTTTCTCTCCTTTTTTTTTCTTCTATTTTCTTACTGTGAATGATGCGTTCCTGATGCATGTTCGATGTTTGAGTTAAAATTTTTCTGGGTTTGCTCAATTGCTGCGTCTATTTGCTTGATTGGTTATTTTTAAAAAAAAATATTGACTTTACTGATTATTGTGCTTGTTTTCTTTTTTCTGTATTGGTTTTTTGTGGAGGTTTCTTATCGATTTCTTTTGAACTGATTAGCTGTTTTGTTATTTTCTAACTTGTATTCTTTTTTTAAAAAAATAAAACATTTCTCCCCATTTCTTAATCCACTTGTTATTGTGTTTTTCCCCTTTTGAATTACGATGCCCTGCCCCCAAATTACTACTTGTGTAATTGGTTTGCTTTCATTGCATAGAGTGAGGTTATGGTCAGTGTAGGTGTAGGTACCTGCATTTAGGTAAGAACTGCAGAGAGGGAGATTGTTGGGATTTGCTGGATAACGGTAATTTGGAAGAGTGCCATTTTCAATAACCCTTTCCATCTTTATGTTTTGGTGAGTGGTGAGAAAATTTAAGGTTGCTGGTAGTTGAACTTTTGGTTTAGAGCTTTTGATATAATTTGTTCCAGACCCAAATGGAATAGATCTAACCATCTGAATTTGAGTGCAAATTGTGTTGACCCCCGTTTCGAAGTGAAACAGTTGGGTTTCTTTTGGCCTTTTTGCTGTTCATTCGCAAGAAGGTAATTAATTTTCCTGCCGGTTGTATTTTGTTCTATAAGGAAGTACATTCTTGATATGGAATTGAAAACTATTTCAGTCAAATGAAGTTTTTATGTTCTTGCTTTAAGGCTGCTGCTGTAGTTGTTTCTTTTCTAGGCATTATAATCTCATAGGTTGCACTTCCTCAAAAGTCAAAACTTCTGGTGAATGTAATATTCAATTCTTATTTTATCAAGGTCGCGGAGATGGAAACTATATTGCAAGGACACAATAATACCATGCCAGCTCGGGAAGTTCTTGTTGCACTTGCTGATAAGTTCAGGTGGGCATTGAGCAGTAGCCTACTGTGGCTTTTATTATGTTTGAGTTGATCTTTGTATGACTTTTTATAGAAGACAGGATTGAATAGTCTAAAAGAATATTTGTTTATATTGTTATAGTGAATCAGTAGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTATGGTAGCTTCTGTTTCTATGCTTGACCTTGATATGATGGTTAAAGGTGTCCAGCTAATTATCATTATTACTTCTTAGGTTTGGAATTGGTTCCAGAATAGACGATATGCTATCAGAGCAAAGACATCCAAGGCTCCTGGAAAGTTAGCTGTCTCTCCAGTTGTCCAAATTGAGTCAACCCCTGTGAGAAATGTGCCTCAAACCGTAGTTGTTCCTGCTCCCACACCAGTAGGTATTAAAAAGAATTGTTATGTTATCTTAGTTTTTAAGCATTTTAATTTTATTACGCTGTTTTTTTCTTTTTTATTACATGTTTATTACTAGCTTATCATCACAAATCTATTCTAGTAGTAGAATGGCATTCGTCAAAACCTCAGTCTAGGCTTGTATCATCATTTCAAAACTTTTCCTCGCCAGCACTGGGAAAAAACTATATGTGGAGGCGTGGAAGCCTTAATGGCCCCAAATCTTCATTTTGATTTCTACATTTCTATGAAATAATTACGGAAAAAAAATTGCAAATTGAGCTGCTAGCTTTTATTGTCTTCTTGTCCTTCTCAAGGATTTTCACCTTGCTCTCTTTTCCACCTCCTGAGCTTTCCCTCAGTTAGATTCTTGGCTTAGGAAGTCTTACATGAGAGAGTTAATACTATGGACCATGTGTAGAGAGACTCTTCCTTCTTTCTTGGGCCTCAGTTGTGTTTCTTCTTTAGAGGGAGCTGTATAAGACCGTCAAATTCTTTGGAGCTGCCAGCTTCTTTTTTCAATTTGGTCTTGGTTTTTTGGGTGGCCCTTGGTGTGTCTTTGGCTTGGAATATGAATGGCATGGCCATGCTGTAGGAGGTTTTGCTTTCTCCTACCTTTAGGGTGAAGGGAAAGTTATGGCGAACTTGCTTCTTTGCTGTTGTTTGGAGGAATTAGCGAGGAATAATAGATTCTTAAAGGGAACATTACATTTAATACTCTGGTGGTTGAAGTATTTCGCTATTATCAGTTGAGTCTTATTCTTTCGAATTGGAGTAATTATTGTCGTTATATAAGTTAGTTTTGCTGTTTGTTTGGGGGGAGGGCGCGAGGGGTGAGTGAGTATCATTTTTTCAATTGGAACAGATTGCTATGGTAAATGTTTCCAAGAAGAAGTTAATATGGTCTTGATTCACCTTATTCCATAATATTGGTTTAGACCATTTAAATCCTCTAATATATTTTAAAAAATATTGAACATTTCCCATGATGGTTCTCAATGCGAGGTCTCTTGGTCCTACAAGTCTAAAGGAAATCCATGATATATTATTTCTACCTTAAATCATGGTTGGCCATGTTTATGTCCTATGAAGAACTATAATGTTTTAGAATGACATGGTGTGGACAGCTATGAAACATGGATGCTTCAGTTTGGATAGTGTGAGAACAAAGTATATGTGAGCAAAAACTTATAGGACAGGTTGACCACTTGACACATTTTGGATGGCTCGATAGTATGTGTCTGTGTCAAACAATTGTTGGGCACTTAAAATAAAATGTTCAATTTATTGGTGTTCCATTTTTGGTCTGTTTATTTAGGTTTGAAAAAAGTGAAATAAAAATAAAGTTGAGAAGACACTAATAAATTTTGAGAGGTAACACCAATCTTGTTTTTCATGCATATTAATGGATGAACATCGTTGATTATGGATTTGGTTTTTTAAGATGATTCATATTGAAGCACAGAAAGTTTGTTTTTGGATCATTTATTTATTTATTTATTGAGATTAATAAGTTTGTTTTAGGATCATTTATTTATTGAGATAAGGCATTTGTATCAGTCAAACTGAAAAGCAATTTTGAGTACTAAAAATGTGGAGGGGAATTTTGACGTAATTATGTTATTGACATTAACATATTTTAATTTTTCATTCAATTTCTGTGCCATTCCAGGCACCGCAAAGAGTGCTCCAGAAAATCCATTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTTAGTATAGCTTGTCTACAAGTATGGGAATTTTGGTGTGAATTAGCTGGTTTCTGTGCTTTTGGATGATAAACCTCCTCATGATAGGTGTAGAGGAACAATTGGAGTTTCATGCATACACACATATGTAAATTAATTAACATGCAACAAACACACTTCCACAATATGAGACATTACTGATTGATTTTTTTTATTTGTTCATGGTCAGGTATGACGTTGCTACCTTTTTATCGCATAGATCTGTGGAAAGTGGTGACCCGGTAATTTTGTGCCTCTTGCATGGAAGTTATTATTTAAGGAAGCATTGTGTTGCCTTTCTTTCCTCATCAACCTATTTGCTGTTTTCTTCTTCATGCATTAATTATTTGAGCTTTTATCATTAAAAATTTGAACATGCACTATTAAGCCAATTAATTCTTGAATGGCCACTATCTCCATTGTTAGGAAAACATTAATCTGCCTTCTATCCTCAACCCATGGGCCCAATGTTAAGGGCTTTTCATTAGTTTGGTGGTGGCTTGAAAACCTTTTGGACCACATTCAATCCGATATTTTCACCAAGTATTTATAAATATGTGGTTTCAAACTAAAAACAAAAGTCTGAATTATGGGGTTTTTGAGTGTTACGGAGAGGGAATTGTAACATTCTCTGACTTGTGAGTTAGTATTACTCTGGATGTTGCTTCCCCCTCCCTACCTTTGAGTTTGTATTGACACATATTTAGGGTTAAGCAACAACTTTTCTGACCAATATTTTTTTATTGTTGGTGATTCCCTAAAACGGTCTGAGATATTTGATTGTAATTCAAAAGTTTGTCTCCTGATTTTTCGTTGAGTACAACAAATGTAGTGGTGAGAATGCAATTCTTTGGACCTCAAAGGAAGGAATAGATCACTTAATCATTGATGTTCATGATTTTGGTAAAGAAATCTGATGTTTTGATTTGTTTGCTTTAATTTGGCTCCCTATATTATCTAATAATTGTTGTTTGTCAGCAAGTCTAATAGTAATTGTTTCTCAGGAAGTACTAGTAAGATTTTCTGGTTTTGGATCCGAGGAGGATGAGTGGGTTAATATACGAAGGAACATTAGACCTCGTTCTCTACCTTGTGAATCATCAGAATGTGTGGCGGTTCTTCCAGGCGATCTCATCTTATGCTTTCAGGTAAATATTTTCACTTCTCCAAACTTCCAGTACTTAAAAGAGAGGCCTTTCCGTAACCTTCTTGCAATCAGTTCAGGACAATCTCTTGGATGTAATTTCCGACTACCTTGTAAAACCACTCCCCTCGTTGGAGTACACAATGATCTTTTAACTTTCTCACTGGAAACTCAACACACGCTCTACCAGTTATAGGGAAAACCTTTTTTTCTTATGAGAAATTTCATTATCTTCGAAATTTTCAGGAGGGAAAAGAGCAGGCACTTTACTTTGATGCCCACGTGCTTGATACACAACGAAGAAGGCATGATGTACGAGGTTGTCGATGCAGGTTTTGGTTCGTTATGATCATGATCAATCTGAGGTGTGTATCTTCTTCAGGTTCTTTTGGTTGTTCCTATTCAGTATTGCTCTCCTAGGTTGGATCGTTGCAACGAACACAAACATCACATCAGTATAACCATTGTCGTTAATTTCACATGAGCTGAAGACTTTAGCTTTTGATGTGGGCAAAATTGGAAATCAAGAGCTTGGTTAGTGGTTGGGCTGATATCTTTTTTTTTACATTTCTTTTTATAAAAAAAGTAATCCTATTCTCTTTCTTTGGAGTTGTGTGAGTAGGCTGGGTAGGTGGTTTTCTTAGGGAAGTTTGCTTCTCGTTATTTAATCTGCTAACCTAACCATGTGGCTACGTGGAAGAACCTTTTCTAATCCTCACGGATTTTTGGAAGTTTTTATTTTCTTCCTTTTTGTAAACTTAATCTATGAAATTCTTGTTTCTTCTTCAAGAAAAATAAAAGGAGGTTATTTCAGTAACAAGCGAGAACTGTTCTATTTAATCAGGCATTGAAGGCTGTTCAGGATTATTGACTTATCTTGCTCTAAATTATTGTTAGGAAATTGTTCAGTTGAGAAAGATTTGCCGTCGACCTGAGACTGATTACCGGTTGCAACAGCTTCACGCCGTAAATGAAGCAGCATCCATTGAGCCCTCAAAGTCTGGCATGGATTCTGTACTGCTCAGTGGTCAGAGGATAAATTTCGAAACCCAAAATCCACTTAGCAAGGATGCAGCCTTGGTTATACCAAATGCAAATCCCCATACAAATGCCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACTGAAACTAACACTGCTCCGATCACATTCAGTTCCGGTAATCACAATGCTCCAACCACATTCAACTCTGCTAATCTCGCAGGTAGCTCTGCATTCTCAAGTGGTATCGTGACAAACACTGTTTCTGGTGGGTCAGCTGACAATGTGTCTGATGGGAAGTTACTTAGTTGA

mRNA sequence

ATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGCTTCACGGCTTCCGAGGTCGCGGAGATGGAAACTATATTGCAAGGACACAATAATACCATGCCAGCTCGGGAAGTTCTTGTTGCACTTGCTGATAAGTTCAGTGAATCAGTAGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTTTGGAATTGGTTCCAGAATAGACGATATGCTATCAGAGCAAAGACATCCAAGGCTCCTGGAAAGTTAGCTGTCTCTCCAGTTGTCCAAATTGAGTCAACCCCTGTGAGAAATGTGCCTCAAACCGTAGTTGTTCCTGCTCCCACACCAGTAGGCACCGCAAAGAGTGCTCCAGAAAATCCATTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTATGACGTTGCTACCTTTTTATCGCATAGATCTGTGGAAAGTGGTGACCCGGAAGTACTAGTAAGATTTTCTGGTTTTGGATCCGAGGAGGATGAGTGGGTTAATATACGAAGGAACATTAGACCTCGTTCTCTACCTTGTGAATCATCAGAATGTGTGGCGGTTCTTCCAGGCGATCTCATCTTATGCTTTCAGGAGGGAAAAGAGCAGGCACTTTACTTTGATGCCCACGTGCTTGATACACAACGAAGAAGGCATGATGTACGAGGTTGTCGATGCAGGTTTTGGTTCGAAATTGTTCAGTTGAGAAAGATTTGCCGTCGACCTGAGACTGATTACCGGTTGCAACAGCTTCACGCCGTAAATGAAGCAGCATCCATTGAGCCCTCAAAGTCTGGCATGGATTCTGTACTGCTCAGTGGTCAGAGGATAAATTTCGAAACCCAAAATCCACTTAGCAAGGATGCAGCCTTGGTTATACCAAATGCAAATCCCCATACAAATGCCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACTGAAACTAACACTGCTCCGATCACATTCAGTTCCGGTAATCACAATGCTCCAACCACATTCAACTCTGCTAATCTCGCAGGTAGCTCTGCATTCTCAAGTGGTATCGTGACAAACACTGTTTCTGGTGGGTCAGCTGACAATGTGTCTGATGGGAAGTTACTTAGTTGA

Coding sequence (CDS)

ATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGCTTCACGGCTTCCGAGGTCGCGGAGATGGAAACTATATTGCAAGGACACAATAATACCATGCCAGCTCGGGAAGTTCTTGTTGCACTTGCTGATAAGTTCAGTGAATCAGTAGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTTTGGAATTGGTTCCAGAATAGACGATATGCTATCAGAGCAAAGACATCCAAGGCTCCTGGAAAGTTAGCTGTCTCTCCAGTTGTCCAAATTGAGTCAACCCCTGTGAGAAATGTGCCTCAAACCGTAGTTGTTCCTGCTCCCACACCAGTAGGCACCGCAAAGAGTGCTCCAGAAAATCCATTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTATGACGTTGCTACCTTTTTATCGCATAGATCTGTGGAAAGTGGTGACCCGGAAGTACTAGTAAGATTTTCTGGTTTTGGATCCGAGGAGGATGAGTGGGTTAATATACGAAGGAACATTAGACCTCGTTCTCTACCTTGTGAATCATCAGAATGTGTGGCGGTTCTTCCAGGCGATCTCATCTTATGCTTTCAGGAGGGAAAAGAGCAGGCACTTTACTTTGATGCCCACGTGCTTGATACACAACGAAGAAGGCATGATGTACGAGGTTGTCGATGCAGGTTTTGGTTCGAAATTGTTCAGTTGAGAAAGATTTGCCGTCGACCTGAGACTGATTACCGGTTGCAACAGCTTCACGCCGTAAATGAAGCAGCATCCATTGAGCCCTCAAAGTCTGGCATGGATTCTGTACTGCTCAGTGGTCAGAGGATAAATTTCGAAACCCAAAATCCACTTAGCAAGGATGCAGCCTTGGTTATACCAAATGCAAATCCCCATACAAATGCCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACTGAAACTAACACTGCTCCGATCACATTCAGTTCCGGTAATCACAATGCTCCAACCACATTCAACTCTGCTAATCTCGCAGGTAGCTCTGCATTCTCAAGTGGTATCGTGACAAACACTGTTTCTGGTGGGTCAGCTGACAATGTGTCTGATGGGAAGTTACTTAGTTGA

Protein sequence

MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWFEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETQNPLSKDAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSSGIVTNTVSGGSADNVSDGKLLS

Homology

[Close]

BLAST of IVF0001756 vs. ExPASy Swiss-Prot
Match: Q8RWJ7 (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.7e-96
Identity = 195/342 (57.02%), Postives = 229/342 (66.96%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF   EV EME IL  HN  MP R +L ALADKFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIE-STPVRNVPQTVVVPAPTPV------ 120
           KQ+WNWFQNRRYA+RA+ +KAPGKL VS + +++    +R+V Q + VP  T +      
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 -----------GTAKSAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSG 180
                      G  +S  +N   EFEAKS RDGAWYDV  FL+HR++E GDPEV VRF+G
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180

Query: 181 FGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 240
           F  EEDEW+N+++++R RSLPCE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRR
Sbjct: 181 FEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRR 240

Query: 241 HDVRGCRCRFWF--------EIVQLRKICRRPETDYRLQQLH-AVNEAASIE----PSKS 300
           HDVRGCRCRF          EIV LRKICRRPETDYRLQQLH AVN+ A+      P+  
Sbjct: 241 HDVRGCRCRFLVRYSHDQSEEIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPALD 300

Query: 301 GMDSVLLSGQRINFETQNPLSKD-------AALVIPNANPHT 305
                 LS          P SKD       A LV P++N  T
Sbjct: 301 AAAKTPLSLPGATVPIVAPESKDPSLSATPATLVQPSSNAAT 342

[Close]

BLAST of IVF0001756 vs. ExPASy Swiss-Prot
Match: Q9XI47 (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.4e-39
Identity = 102/248 (41.13%), Postives = 137/248 (55.24%), Query Frame = 0


Query: 14  FTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYA 73
           FT SE+ +ME + +   +    ++    +A  FS SV R GK ++  KQV  WFQ +   
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEK--- 73

Query: 74  IRAKTSKAPGKLAVSPVVQIE-----STPVRNVPQTVVVPAPTPVGTAK-SAPENPLSEF 133
                S+   K   SP +QI      S+   N      V   T V T K  A +     F
Sbjct: 74  -LKHQSQPKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAF 133

Query: 134 EAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESS 193
           EAKS RD AWYDV++FL++R + +G+ EV VRFSGF +  DEWVN++ ++R RS+P E S
Sbjct: 134 EAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPS 193

Query: 194 ECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF--------EIVQL 248
           EC  V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C F          E + L
Sbjct: 194 ECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGL 253

[Close]

BLAST of IVF0001756 vs. ExPASy TrEMBL
Match: A0A5D3CH38 (Protein SAWADEE HOMEODOMAIN-like protein 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001130 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.7e-202
Identity = 371/382 (97.12%), Postives = 371/382 (97.12%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120
           KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF------ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRF        
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHNQ 240

Query: 241 --EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET-QNPLSK 300
             EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET QNPLSK
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSK 300

Query: 301 DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360
           DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS
Sbjct: 301 DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360

Query: 361 GIVTNTVSGGSADNVSDGKLLS 374
           GIVTNTVSGGSADNVSDGKLLS
Sbjct: 361 GIVTNTVSGGSADNVSDGKLLS 382

[Close]

BLAST of IVF0001756 vs. ExPASy TrEMBL
Match: A0A5A7UUV7 (SAWADEE HOMEODOMAIN-like protein 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00380 PE=4 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 8.6e-202
Identity = 370/382 (96.86%), Postives = 370/382 (96.86%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120
           KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF------ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRF        
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 --EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET-QNPLSK 300
             EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET QNPLSK
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSK 300

Query: 301 DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360
           DAALVIPNANPH NAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360

Query: 361 GIVTNTVSGGSADNVSDGKLLS 374
           GIVTNTVSGGSADNVSDGKLLS
Sbjct: 361 GIVTNTVSGGSADNVSDGKLLS 382

[Close]

BLAST of IVF0001756 vs. ExPASy TrEMBL
Match: A0A1S3C274 (protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496064 PE=4 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 8.6e-202
Identity = 370/382 (96.86%), Postives = 370/382 (96.86%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120
           KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF------ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRF        
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 --EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET-QNPLSK 300
             EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET QNPLSK
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSK 300

Query: 301 DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360
           DAALVIPNANPH NAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360

Query: 361 GIVTNTVSGGSADNVSDGKLLS 374
           GIVTNTVSGGSADNVSDGKLLS
Sbjct: 361 GIVTNTVSGGSADNVSDGKLLS 382

[Close]

BLAST of IVF0001756 vs. ExPASy TrEMBL
Match: A0A1S3C2X6 (protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496064 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 6.4e-189
Identity = 349/361 (96.68%), Postives = 349/361 (96.68%), Query Frame = 0


Query: 22  METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 81
           METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA
Sbjct: 1   METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 82  PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA 141
           PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA 120

Query: 142 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 201
           TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 121 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 180

Query: 202 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF--------EIVQLRKICRRPETDYRLQ 261
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRF          EIVQLRKICRRPETDYRLQ
Sbjct: 181 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 240

Query: 262 QLHAVNEAASIEPSKSGMDSVLLSGQRINFET-QNPLSKDAALVIPNANPHTNAHAQTST 321
           QLHAVNEAASIEPSKSGMDSVLLSGQRINFET QNPLSKDAALVIPNANPH NAHAQTST
Sbjct: 241 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSKDAALVIPNANPHINAHAQTST 300

Query: 322 QEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSSGIVTNTVSGGSADNVSDGKLL 374
           QEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSSGIVTNTVSGGSADNVSDGKLL
Sbjct: 301 QEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSSGIVTNTVSGGSADNVSDGKLL 360

[Close]

BLAST of IVF0001756 vs. ExPASy TrEMBL
Match: A0A0A0LC67 (SAWADEE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G236580 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 5.2e-183
Identity = 348/382 (91.10%), Postives = 349/382 (91.36%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTASEVAEME ILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120
           K      QNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAP PVG+AK AP
Sbjct: 61  K------QNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF------ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRF        
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 --EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET-QNPLSK 300
             EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET QNPLSK
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360
           DAALVIPNANPH NAHAQTSTQEARNTETNT           APTTFNSANLAGSSAFSS
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNT-----------APTTFNSANLAGSSAFSS 360

Query: 361 GIVTNTVSGGSADNVSDGKLLS 374
           GIVTNTVS GSADNVSDGKLLS
Sbjct: 361 GIVTNTVSAGSADNVSDGKLLS 365

[Close]

BLAST of IVF0001756 vs. NCBI nr
Match: TYK11257.1 (protein SAWADEE HOMEODOMAIN-like protein 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 713 bits (1841), Expect = 1.36e-258
Identity = 371/382 (97.12%), Postives = 371/382 (97.12%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120
           KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF------ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRF        
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHNQ 240

Query: 241 --EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET-QNPLSK 300
             EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET QNPLSK
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSK 300

Query: 301 DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360
           DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS
Sbjct: 301 DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360

Query: 361 GIVTNTVSGGSADNVSDGKLLS 373
           GIVTNTVSGGSADNVSDGKLLS
Sbjct: 361 GIVTNTVSGGSADNVSDGKLLS 382

[Close]

BLAST of IVF0001756 vs. NCBI nr
Match: XP_008456010.1 (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo] >KAA0058840.1 SAWADEE HOMEODOMAIN-like protein 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 711 bits (1835), Expect = 1.12e-257
Identity = 370/382 (96.86%), Postives = 370/382 (96.86%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120
           KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF------ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRF        
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 --EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET-QNPLSK 300
             EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET QNPLSK
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSK 300

Query: 301 DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360
           DAALVIPNANPH NAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360

Query: 361 GIVTNTVSGGSADNVSDGKLLS 373
           GIVTNTVSGGSADNVSDGKLLS
Sbjct: 361 GIVTNTVSGGSADNVSDGKLLS 382

[Close]

BLAST of IVF0001756 vs. NCBI nr
Match: KAE8650545.1 (hypothetical protein Csa_011086 [Cucumis sativus])

HSP 1 Score: 671 bits (1732), Expect = 3.68e-242
Identity = 354/382 (92.67%), Postives = 355/382 (92.93%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTASEVAEME ILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120
           KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAP PVG+AK AP
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF------ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRF        
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 --EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET-QNPLSK 300
             EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET QNPLSK
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360
           DAALVIPNANPH NAHAQTSTQEARNTETNTAP           TTFNSANLAGSSAFSS
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAP-----------TTFNSANLAGSSAFSS 360

Query: 361 GIVTNTVSGGSADNVSDGKLLS 373
           GIVTNTVS GSADNVSDGKLLS
Sbjct: 361 GIVTNTVSAGSADNVSDGKLLS 371

[Close]

BLAST of IVF0001756 vs. NCBI nr
Match: XP_008456011.1 (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis melo])

HSP 1 Score: 668 bits (1724), Expect = 4.20e-241
Identity = 349/361 (96.68%), Postives = 349/361 (96.68%), Query Frame = 0


Query: 22  METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 81
           METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA
Sbjct: 1   METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 82  PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA 141
           PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA 120

Query: 142 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 201
           TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 121 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 180

Query: 202 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF--------EIVQLRKICRRPETDYRLQ 261
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRF          EIVQLRKICRRPETDYRLQ
Sbjct: 181 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 240

Query: 262 QLHAVNEAASIEPSKSGMDSVLLSGQRINFET-QNPLSKDAALVIPNANPHTNAHAQTST 321
           QLHAVNEAASIEPSKSGMDSVLLSGQRINFET QNPLSKDAALVIPNANPH NAHAQTST
Sbjct: 241 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSKDAALVIPNANPHINAHAQTST 300

Query: 322 QEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSSGIVTNTVSGGSADNVSDGKLL 373
           QEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSSGIVTNTVSGGSADNVSDGKLL
Sbjct: 301 QEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSSGIVTNTVSGGSADNVSDGKLL 360

[Close]

BLAST of IVF0001756 vs. NCBI nr
Match: XP_038878066.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 665 bits (1716), Expect = 1.52e-239
Identity = 344/382 (90.05%), Postives = 355/382 (92.93%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTASEVAEME ILQGHNNTMPAREVLVALA+KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120
           KQVWNWFQNRRYAIRAKT+KAPGKLAVSP+VQIESTPVRNVPQT+VVPAP PVG+AK AP
Sbjct: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIESTPVRNVPQTIVVPAPVPVGSAKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF------ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRF        
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 --EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFET-QNPLSK 300
             EIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKS MDSVLLSGQRINFET Q PL+K
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSSMDSVLLSGQRINFETTQKPLNK 300

Query: 301 DAALVIPNANPHTNAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360
           D  LVIPNAN + N HAQT+TQEARNTETN+AP TF+SG H+APTTFNS N AG SAFS 
Sbjct: 301 DTTLVIPNANANINVHAQTNTQEARNTETNSAPTTFNSGIHSAPTTFNSGNPAGGSAFSV 360

Query: 361 GIVTNTVSGGSADNVSDGKLLS 373
           GIVTNTVSGGSADNVSDGKLLS
Sbjct: 361 GIVTNTVSGGSADNVSDGKLLS 382

[Close]

BLAST of IVF0001756 vs. TAIR 10
Match: AT3G18380.3 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 356.7 bits (914), Expect = 2.3e-98
Identity = 196/340 (57.65%), Postives = 230/340 (67.65%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF   EV EME IL  HN  MP R +L ALADKFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIE-STPVRNVPQTVVV------------ 120
           KQ+WNWFQNRRYA+RA+ +KAPGKL VS + +++    +R+V Q + V            
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 --PAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGS 180
             PAP+  G  +S  +N   EFEAKS RDGAWYDV  FL+HR++E GDPEV VRF+GF  
Sbjct: 121 MTPAPSVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEV 180

Query: 181 EEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDV 240
           EEDEW+N+++++R RSLPCE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRRHDV
Sbjct: 181 EEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDV 240

Query: 241 RGCRCRFWF---------EIVQLRKICRRPETDYRLQQLH-AVNEAASIE----PSKSGM 300
           RGCRCRF           EIV LRKICRRPETDYRLQQLH AVN+ A+      P+    
Sbjct: 241 RGCRCRFLVRYSHDQSEQEIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPALDAA 300

Query: 301 DSVLLSGQRINFETQNPLSKD-------AALVIPNANPHT 305
               LS          P SKD       A LV P++N  T
Sbjct: 301 AKTPLSLPGATVPIVAPESKDPSLSATPATLVQPSSNAAT 340

[Close]

BLAST of IVF0001756 vs. TAIR 10
Match: AT3G18380.1 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 353.6 bits (906), Expect = 1.9e-97
Identity = 195/342 (57.02%), Postives = 229/342 (66.96%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF   EV EME IL  HN  MP R +L ALADKFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIE-STPVRNVPQTVVVPAPTPV------ 120
           KQ+WNWFQNRRYA+RA+ +KAPGKL VS + +++    +R+V Q + VP  T +      
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 -----------GTAKSAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSG 180
                      G  +S  +N   EFEAKS RDGAWYDV  FL+HR++E GDPEV VRF+G
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180

Query: 181 FGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 240
           F  EEDEW+N+++++R RSLPCE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRR
Sbjct: 181 FEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRR 240

Query: 241 HDVRGCRCRFWF--------EIVQLRKICRRPETDYRLQQLH-AVNEAASIE----PSKS 300
           HDVRGCRCRF          EIV LRKICRRPETDYRLQQLH AVN+ A+      P+  
Sbjct: 241 HDVRGCRCRFLVRYSHDQSEEIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPALD 300

Query: 301 GMDSVLLSGQRINFETQNPLSKD-------AALVIPNANPHT 305
                 LS          P SKD       A LV P++N  T
Sbjct: 301 AAAKTPLSLPGATVPIVAPESKDPSLSATPATLVQPSSNAAT 342

[Close]

BLAST of IVF0001756 vs. TAIR 10
Match: AT3G18380.2 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 353.2 bits (905), Expect = 2.5e-97
Identity = 195/343 (56.85%), Postives = 229/343 (66.76%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF   EV EME IL  HN  MP R +L ALADKFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIE-STPVRNVPQTVVVPAPTPV------ 120
           KQ+WNWFQNRRYA+RA+ +KAPGKL VS + +++    +R+V Q + VP  T +      
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 -----------GTAKSAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSG 180
                      G  +S  +N   EFEAKS RDGAWYDV  FL+HR++E GDPEV VRF+G
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180

Query: 181 FGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 240
           F  EEDEW+N+++++R RSLPCE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRR
Sbjct: 181 FEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRR 240

Query: 241 HDVRGCRCRFWF---------EIVQLRKICRRPETDYRLQQLH-AVNEAASIE----PSK 300
           HDVRGCRCRF           EIV LRKICRRPETDYRLQQLH AVN+ A+      P+ 
Sbjct: 241 HDVRGCRCRFLVRYSHDQSEQEIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPAL 300

Query: 301 SGMDSVLLSGQRINFETQNPLSKD-------AALVIPNANPHT 305
                  LS          P SKD       A LV P++N  T
Sbjct: 301 DAAAKTPLSLPGATVPIVAPESKDPSLSATPATLVQPSSNAAT 343

[Close]

BLAST of IVF0001756 vs. TAIR 10
Match: AT1G15215.2 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 164.5 bits (415), Expect = 1.7e-40
Identity = 102/248 (41.13%), Postives = 137/248 (55.24%), Query Frame = 0


Query: 14  FTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYA 73
           FT SE+ +ME + +   +    ++    +A  FS SV R GK ++  KQV  WFQ +   
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEK--- 73

Query: 74  IRAKTSKAPGKLAVSPVVQIE-----STPVRNVPQTVVVPAPTPVGTAK-SAPENPLSEF 133
                S+   K   SP +QI      S+   N      V   T V T K  A +     F
Sbjct: 74  -LKHQSQPKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAF 133

Query: 134 EAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESS 193
           EAKS RD AWYDV++FL++R + +G+ EV VRFSGF +  DEWVN++ ++R RS+P E S
Sbjct: 134 EAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPS 193

Query: 194 ECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFWF--------EIVQL 248
           EC  V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C F          E + L
Sbjct: 194 ECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGL 253

[Close]

BLAST of IVF0001756 vs. TAIR 10
Match: AT1G15215.3 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 156.4 bits (394), Expect = 4.6e-38
Identity = 94/225 (41.78%), Postives = 127/225 (56.44%), Query Frame = 0


Query: 14  FTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYA 73
           FT SE+ +ME + +   +    ++    +A  FS SV R GK ++  KQV  WFQ +   
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEK--- 73

Query: 74  IRAKTSKAPGKLAVSPVVQIE-----STPVRNVPQTVVVPAPTPVGTAK-SAPENPLSEF 133
                S+   K   SP +QI      S+   N      V   T V T K  A +     F
Sbjct: 74  -LKHQSQPKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAF 133

Query: 134 EAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESS 193
           EAKS RD AWYDV++FL++R + +G+ EV VRFSGF +  DEWVN++ ++R RS+P E S
Sbjct: 134 EAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPS 193

Query: 194 ECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRF 233
           EC  V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C F
Sbjct: 194 ECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVF 234

The following BLAST results are available for this feature:

BLAST of IVF0001756 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWJ7	2.7e-96	57.02	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE...	[more]
Q9XI47	2.4e-39	41.13	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE...	[more]

BLAST of IVF0001756 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CH38	1.7e-202	97.12	Protein SAWADEE HOMEODOMAIN-like protein 2 isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A5A7UUV7	8.6e-202	96.86	SAWADEE HOMEODOMAIN-like protein 2 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3C274	8.6e-202	96.86	protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3C2X6	6.4e-189	96.68	protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LC67	5.2e-183	91.10	SAWADEE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G236580 PE=...	[more]

BLAST of IVF0001756 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11257.1	1.36e-258	97.12	protein SAWADEE HOMEODOMAIN-like protein 2 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008456010.1	1.12e-257	96.86	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo] >KAA0...	[more]
KAE8650545.1	3.68e-242	92.67	hypothetical protein Csa_011086 [Cucumis sativus]	[more]
XP_008456011.1	4.20e-241	96.68	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis melo]	[more]
XP_038878066.1	1.52e-239	90.05	protein SAWADEE HOMEODOMAIN HOMOLOG 2-like isoform X1 [Benincasa hispida]	[more]

BLAST of IVF0001756 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18380.3	2.3e-98	57.65	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]
AT3G18380.1	1.9e-97	57.02	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]
AT3G18380.2	2.5e-97	56.85	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]
AT1G15215.2	1.7e-40	41.13	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.3	4.6e-38	41.78	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 7..81 e-value: 0.0029 score: 20.7
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 13..77 score: 9.539455
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 13..75 e-value: 8.82815E-4 score: 35.2969
IPR032001	SAWADEE domain	PFAM	PF16719	SAWADEE	coord: 125..233 e-value: 5.2E-33 score: 114.0
None	No IPR available	GENE3D	2.30.30.140		coord: 184..248 e-value: 1.1E-26 score: 94.3
None	No IPR available	GENE3D	1.10.10.60		coord: 2..85 e-value: 2.0E-5 score: 26.1
None	No IPR available	GENE3D	2.40.50.40		coord: 124..183 e-value: 1.5E-29 score: 103.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..332
None	No IPR available	PANTHER	PTHR33827:SF7	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 1..319
IPR039276	Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2	PANTHER	PTHR33827	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 1..319
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 4..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001756.1	IVF0001756.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding