IVF0001710 (gene) Melon (IVF77) v1

Overview
NameIVF0001710
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLOB domain-containing protein
Locationchr03: 24187938 .. 24188484 (+)
RNA-Seq ExpressionIVF0001710
SyntenyIVF0001710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCCAAATCGTTGTGCAGCTTGTAAGTATTTAAGAAGAAGATGTTCATCAAATTGCATTTTTTCTCCTTATTTCCCTTCAAACAATCCTCAAAGATTCGCCATTGTTCATAGAATCTACGGTGCTAGTAATGTTGCTAAATTCCTTCAAGTGAGTATATTATTTTATTTATTTGAACAAATAATTAAATTATAACCTAAATTAAAAATCTTTGAGACTCTTTTGGTTAATTTAATATAATCAGCAAGTTCCTATGGATGTACGAGGTGAAGCAGCAGAAACTTTGTATTTTGAAGCAAAATGTAGAATTGAAGATCCAATTTACGGATGTGTTGGGATTATTTCTCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTCAGATTGCTCTCCTCGCTTCCAACCTTCAACAAGCCCAACACGAAGCCCAAGCTTTTGCCTTTGATGACCCCAGCTCAGGCCCAATTTGTATTGGGCTCTCCACTCCAGCCCATTGGCTTCATTCTAGCTTTTCCGATTCATAA

mRNA sequence

ATGATTCCAAATCGTTGTGCAGCTTGTAAGTATTTAAGAAGAAGATGTTCATCAAATTGCATTTTTTCTCCTTATTTCCCTTCAAACAATCCTCAAAGATTCGCCATTGTTCATAGAATCTACGGTGCTAGTAATGTTGCTAAATTCCTTCAACAAGTTCCTATGGATGTACGAGGTGAAGCAGCAGAAACTTTGTATTTTGAAGCAAAATGTAGAATTGAAGATCCAATTTACGGATGTGTTGGGATTATTTCTCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTCAGATTGCTCTCCTCGCTTCCAACCTTCAACAAGCCCAACACGAAGCCCAAGCTTTTGCCTTTGATGACCCCAGCTCAGGCCCAATTTGTATTGGGCTCTCCACTCCAGCCCATTGGCTTCATTCTAGCTTTTCCGATTCATAA

Coding sequence (CDS)

ATGATTCCAAATCGTTGTGCAGCTTGTAAGTATTTAAGAAGAAGATGTTCATCAAATTGCATTTTTTCTCCTTATTTCCCTTCAAACAATCCTCAAAGATTCGCCATTGTTCATAGAATCTACGGTGCTAGTAATGTTGCTAAATTCCTTCAACAAGTTCCTATGGATGTACGAGGTGAAGCAGCAGAAACTTTGTATTTTGAAGCAAAATGTAGAATTGAAGATCCAATTTACGGATGTGTTGGGATTATTTCTCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTCAGATTGCTCTCCTCGCTTCCAACCTTCAACAAGCCCAACACGAAGCCCAAGCTTTTGCCTTTGATGACCCCAGCTCAGGCCCAATTTGTATTGGGCTCTCCACTCCAGCCCATTGGCTTCATTCTAGCTTTTCCGATTCATAA

Protein sequence

MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQAFAFDDPSSGPICIGLSTPAHWLHSSFSDS
Homology
BLAST of IVF0001710 vs. ExPASy Swiss-Prot
Match: P59468 (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.0e-38
Identity = 71/117 (60.68%), Postives = 91/117 (77.78%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           M P RCAACKYLRRRC  +C+FSPYFP N+PQ+FA VHRIYGA NV+K LQQ+P   R E
Sbjct: 1   MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQH 118
           A E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAKT+A+IA+  + L Q Q+
Sbjct: 61  AVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQN 117

BLAST of IVF0001710 vs. ExPASy Swiss-Prot
Match: P59467 (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-37
Identity = 70/114 (61.40%), Postives = 89/114 (78.07%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           M P RCAACKYLRRRC  +C+FSPYFP N+PQ+FA VHRIYGA NV+K LQQ+P   R E
Sbjct: 1   MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQ 115
           A E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAKT+A+IA+  + L Q
Sbjct: 61  AVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQ 114

BLAST of IVF0001710 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-30
Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = 0

Query: 6   CAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGEAAETL 65
           CAACK LRRRC+ +C+FSPYFP++ PQ+FA VHR++GASNV K LQ++P+  RG+A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  YFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQAFAFD 125
            +EA  R+ DP+YGCVG IS LQ ++ V + QLA  +A++  L    Q           D
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVR-QSTNFPGHGLCPD 133

Query: 126 DPSS 130
            PSS
Sbjct: 134 SPSS 136

BLAST of IVF0001710 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-28
Identity = 54/100 (54.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query: 6   CAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGEAAETL 65
           CA+CK LRRRC+ +CIF+PYFP ++P +FAIVH+++GASNV+K LQ++P+  R +A  +L
Sbjct: 9   CASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSL 68

Query: 66  YFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQI 106
            FEA  R+ DP+YGCVG IS LQ ++   + QLA  +A+I
Sbjct: 69  VFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

BLAST of IVF0001710 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-26
Identity = 49/101 (48.51%), Postives = 74/101 (73.27%), Query Frame = 0

Query: 6   CAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGEAAETL 65
           CAACK+LRR+C+  C+F+PYFP + PQ+FA VH+++GASNVAK L ++  + R +A  +L
Sbjct: 8   CAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSL 67

Query: 66  YFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIA 107
           ++EA+ R+ DP+YGCVG+IS LQ+ L      L   + ++A
Sbjct: 68  FYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

BLAST of IVF0001710 vs. ExPASy TrEMBL
Match: A0A0A0LLX6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.5e-68
Identity = 132/147 (89.80%), Postives = 136/147 (92.52%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           MIP+RCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMD+RGE
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQ 120
           AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA+IALLASN QQAQHE  
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHE-- 120

Query: 121 AFAFDDPSSGPICIGLSTPAHWLHSSF 148
            F FDDPSSGPI  GLSTPAH+    F
Sbjct: 121 DFPFDDPSSGPIFTGLSTPAHFSEQLF 145

BLAST of IVF0001710 vs. ExPASy TrEMBL
Match: A0A6J1E5I6 (LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430896 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55
Identity = 111/147 (75.51%), Postives = 128/147 (87.07%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           MI  RCAACKYLRRRC+S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ +R E
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQ-HEA 120
           AAE+L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA LASNLQ+AQ H+ 
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPHDF 120

Query: 121 QAFAFDDPSS-GPICIGLSTPAHWLHS 146
            A     P++ G   IGLSTPAHW +S
Sbjct: 121 AAQPIQGPNTIGFSQIGLSTPAHWFNS 147

BLAST of IVF0001710 vs. ExPASy TrEMBL
Match: A0A1S3AY36 (LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 112/152 (73.68%), Postives = 126/152 (82.89%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  +RGE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQ 120
           AAETL FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA +ASN+Q+ Q + Q
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 AFAFDDPSSGPIC-----IGLSTPAHWLHSSF 148
            FAF  P  GP       IGLS+PAH  +SSF
Sbjct: 121 DFAF-QPIQGPNSVGFSQIGLSSPAHCFNSSF 151

BLAST of IVF0001710 vs. ExPASy TrEMBL
Match: A0A6J1JCD0 (LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC111483182 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54
Identity = 112/150 (74.67%), Postives = 126/150 (84.00%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ +R E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQ 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA LASNL Q + + Q
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQ-EAQPQ 120

Query: 121 AFAFDDPSSGPIC-----IGLSTPAHWLHS 146
            FA  +P  GP       IGLSTPAHW +S
Sbjct: 121 DFAV-EPIQGPNTIGFSQIGLSTPAHWFNS 148

BLAST of IVF0001710 vs. ExPASy TrEMBL
Match: A0A0A0L9N7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.0e-53
Identity = 112/152 (73.68%), Postives = 126/152 (82.89%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  +R E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQ 120
           AAETL FEAKCRIEDP+YGCVGIISQLQ+ELHVAETQLAKTRA+IA +ASN+Q+ Q + Q
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQE-QPQPQ 120

Query: 121 AFAFDDPSSGPIC-----IGLSTPAHWLHSSF 148
            FAF +P  GP       IGLSTPAH  +S+F
Sbjct: 121 DFAF-EPIQGPNSVGFSQIGLSTPAHCFNSTF 150

BLAST of IVF0001710 vs. NCBI nr
Match: XP_022923144.1 (LOB domain-containing protein 24-like [Cucurbita moschata])

HSP 1 Score: 224 bits (571), Expect = 1.26e-72
Identity = 111/147 (75.51%), Postives = 128/147 (87.07%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           MI  RCAACKYLRRRC+S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ +R E
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQ-HEA 120
           AAE+L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA LASNLQ+AQ H+ 
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPHDF 120

Query: 121 QAFAFDDPSS-GPICIGLSTPAHWLHS 145
            A     P++ G   IGLSTPAHW +S
Sbjct: 121 AAQPIQGPNTIGFSQIGLSTPAHWFNS 147

BLAST of IVF0001710 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223 bits (569), Expect = 2.54e-72
Identity = 114/150 (76.00%), Postives = 126/150 (84.00%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ +R E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQ 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA LASNLQ+AQ   Q
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQ--PQ 120

Query: 121 AFAFDDPSSGPICIG-----LSTPAHWLHS 145
            FA   P  GP  IG     LSTPAHW +S
Sbjct: 121 DFAVQ-PIQGPNTIGFSQIGLSTPAHWFNS 147

BLAST of IVF0001710 vs. NCBI nr
Match: XP_008439169.1 (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo])

HSP 1 Score: 222 bits (566), Expect = 8.58e-72
Identity = 112/152 (73.68%), Postives = 126/152 (82.89%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  +RGE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQ 120
           AAETL FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA +ASN+Q+ Q + Q
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 AFAFDDPSSGPIC-----IGLSTPAHWLHSSF 147
            FAF  P  GP       IGLS+PAH  +SSF
Sbjct: 121 DFAFQ-PIQGPNSVGFSQIGLSSPAHCFNSSF 151

BLAST of IVF0001710 vs. NCBI nr
Match: KAG7014789.1 (LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221 bits (564), Expect = 1.47e-71
Identity = 110/147 (74.83%), Postives = 126/147 (85.71%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ +R E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQ-HEA 120
           AAE+L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA LASNLQ+AQ H+ 
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQLHDF 120

Query: 121 QAFAFDDPSS-GPICIGLSTPAHWLHS 145
                  P++ G   IGLSTPAHW +S
Sbjct: 121 AVQPIQGPNTIGFSQIGLSTPAHWFNS 147

BLAST of IVF0001710 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima])

HSP 1 Score: 221 bits (564), Expect = 1.52e-71
Identity = 112/150 (74.67%), Postives = 126/150 (84.00%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ +R E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQ 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA LASNL Q + + Q
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQ-EAQPQ 120

Query: 121 AFAFDDPSSGPICIG-----LSTPAHWLHS 145
            FA + P  GP  IG     LSTPAHW +S
Sbjct: 121 DFAVE-PIQGPNTIGFSQIGLSTPAHWFNS 148

BLAST of IVF0001710 vs. TAIR 10
Match: AT3G26660.1 (LOB domain-containing protein 24 )

HSP 1 Score: 159.5 bits (402), Expect = 2.2e-39
Identity = 71/117 (60.68%), Postives = 91/117 (77.78%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           M P RCAACKYLRRRC  +C+FSPYFP N+PQ+FA VHRIYGA NV+K LQQ+P   R E
Sbjct: 1   MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQH 118
           A E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAKT+A+IA+  + L Q Q+
Sbjct: 61  AVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQN 117

BLAST of IVF0001710 vs. TAIR 10
Match: AT3G26620.1 (LOB domain-containing protein 23 )

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 70/114 (61.40%), Postives = 89/114 (78.07%), Query Frame = 0

Query: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60
           M P RCAACKYLRRRC  +C+FSPYFP N+PQ+FA VHRIYGA NV+K LQQ+P   R E
Sbjct: 1   MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE 60

Query: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQ 115
           A E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAKT+A+IA+  + L Q
Sbjct: 61  AVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQ 114

BLAST of IVF0001710 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31
Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = 0

Query: 6   CAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGEAAETL 65
           CAACK LRRRC+ +C+FSPYFP++ PQ+FA VHR++GASNV K LQ++P+  RG+A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  YFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQAFAFD 125
            +EA  R+ DP+YGCVG IS LQ ++ V + QLA  +A++  L    Q           D
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVR-QSTNFPGHGLCPD 133

Query: 126 DPSS 130
            PSS
Sbjct: 134 SPSS 136

BLAST of IVF0001710 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.0e-29
Identity = 54/100 (54.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query: 6   CAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGEAAETL 65
           CA+CK LRRRC+ +CIF+PYFP ++P +FAIVH+++GASNV+K LQ++P+  R +A  +L
Sbjct: 9   CASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSL 68

Query: 66  YFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQI 106
            FEA  R+ DP+YGCVG IS LQ ++   + QLA  +A+I
Sbjct: 69  VFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

BLAST of IVF0001710 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27
Identity = 49/101 (48.51%), Postives = 74/101 (73.27%), Query Frame = 0

Query: 6   CAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGEAAETL 65
           CAACK+LRR+C+  C+F+PYFP + PQ+FA VH+++GASNVAK L ++  + R +A  +L
Sbjct: 8   CAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSL 67

Query: 66  YFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIA 107
           ++EA+ R+ DP+YGCVG+IS LQ+ L      L   + ++A
Sbjct: 68  FYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P594683.0e-3860.68LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 S... [more]
P594671.5e-3761.40LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 S... [more]
Q9SHE92.3e-3049.19LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
Q8LBW32.9e-2854.00LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
Q9FKZ31.6e-2648.51LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A0A0LLX66.5e-6889.80LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV... [more]
A0A6J1E5I63.7e-5575.51LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430... [more]
A0A1S3AY361.1e-5473.68LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE... [more]
A0A6J1JCD02.4e-5474.67LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC11148318... [more]
A0A0A0L9N72.0e-5373.68LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV... [more]
Match NameE-valueIdentityDescription
XP_022923144.11.26e-7275.51LOB domain-containing protein 24-like [Cucurbita moschata][more]
XP_023522202.12.54e-7276.00LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo][more]
XP_008439169.18.58e-7273.68PREDICTED: LOB domain-containing protein 24-like [Cucumis melo][more]
KAG7014789.11.47e-7174.83LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyros... [more]
XP_022985104.11.52e-7174.67LOB domain-containing protein 24-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT3G26660.12.2e-3960.68LOB domain-containing protein 24 [more]
AT3G26620.11.1e-3861.40LOB domain-containing protein 23 [more]
AT1G31320.11.7e-3149.19LOB domain-containing protein 4 [more]
AT2G30130.12.0e-2954.00Lateral organ boundaries (LOB) domain family protein [more]
AT5G66870.11.1e-2748.51ASYMMETRIC LEAVES 2-like 1 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..118
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 1..119
NoneNo IPR availablePANTHERPTHR31301:SF120LOB DOMAIN-CONTAINING PROTEIN 23-RELATEDcoord: 1..119
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 5..102
e-value: 7.3E-38
score: 129.1
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 4..105
score: 24.490587

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001710.2IVF0001710.2mRNA