IVF0001675 (gene) Melon (IVF77) v1

Overview


Name	IVF0001675
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein DMP2-like
Location	chr05: 12715211 .. 12715420 (+)
RNA-Seq Expression	IVF0001675
Synteny	IVF0001675

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTCCGCCGTTGAAAAAACCCTTACCGGCATCAGAAACCTAATTCGTCTCCTCCCCACCGGCACCGTCTTTCTTTTCCAATTCCTCAGTCCAATCCTCACCAACAGCGGCTACCGCGAACCAATCAACAAAAAAGGCAGAGAGATAAAGAAGAAGAACAAAACGTTGTACTCGTTCTTCCTTGGGCGAAAGAAAATAGTGTAG

mRNA sequence

ATGGCTGCCTCCGCCGTTGAAAAAACCCTTACCGGCATCAGAAACCTAATTCGTCTCCTCCCCACCGGCACCGTCTTTCTTTTCCAATTCCTCAGTCCAATCCTCACCAACAGCGGCTACCGCGAACCAATCAACAAAAAAGGCAGAGAGATAAAGAAGAAGAACAAAACGTTGTACTCGTTCTTCCTTGGGCGAAAGAAAATAGTGTAG

Coding sequence (CDS)

ATGGCTGCCTCCGCCGTTGAAAAAACCCTTACCGGCATCAGAAACCTAATTCGTCTCCTCCCCACCGGCACCGTCTTTCTTTTCCAATTCCTCAGTCCAATCCTCACCAACAGCGGCTACCGCGAACCAATCAACAAAAAAGGCAGAGAGATAAAGAAGAAGAACAAAACGTTGTACTCGTTCTTCCTTGGGCGAAAGAAAATAGTGTAG

Protein sequence

MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINKKGREIKKKNKTLYSFFLGRKKIV

Homology

[Close]

BLAST of IVF0001675 vs. ExPASy Swiss-Prot
Match: Q9LVF1 (Protein DMP2 OS=Arabidopsis thaliana OX=3702 GN=DMP2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-07
Identity = 25/40 (62.50%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 7  EKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 47
          ++T +G+ +LI+LLPTGTVFLFQFL+P+LTN+G+   INK
Sbjct: 10 DRTYSGVGDLIKLLPTGTVFLFQFLNPVLTNNGHCLLINK 49

[Close]

BLAST of IVF0001675 vs. ExPASy Swiss-Prot
Match: Q9LVF4 (Protein DMP1 OS=Arabidopsis thaliana OX=3702 GN=DMP1 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 5.9e-05
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 8  KTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 47
          K+LTG+ +LI+LLPTGT+F++  L+P+LTN G     NK
Sbjct: 25 KSLTGLESLIKLLPTGTLFIYLLLNPVLTNDGECSTGNK 63

[Close]

BLAST of IVF0001675 vs. ExPASy TrEMBL
Match: A0A6J1IDW7 (protein DMP2-like OS=Cucurbita maxima OX=3661 GN=LOC111472274 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 47
          MAASA EKTLTG+ NLIRLLPTGTVFLFQFLSPILTNSG  EPINK
Sbjct: 1  MAASATEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGQCEPINK 46

[Close]

BLAST of IVF0001675 vs. ExPASy TrEMBL
Match: A0A6J1IK18 (protein DMP2-like OS=Cucurbita maxima OX=3661 GN=LOC111475715 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 47
          MAASA EKTLTG+ NLIRLLPTGTVFLFQFLSPILTNSG  EPINK
Sbjct: 23 MAASATEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGQCEPINK 68

[Close]

BLAST of IVF0001675 vs. ExPASy TrEMBL
Match: A0A6J1GS26 (protein DMP2-like OS=Cucurbita moschata OX=3662 GN=LOC111456470 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 47
          MAASA EKTLTG+ NLIRLLPTGTVFLFQFLSPILTNSG  EPINK
Sbjct: 23 MAASATEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGQCEPINK 68

[Close]

BLAST of IVF0001675 vs. ExPASy TrEMBL
Match: A0A5D3CX53 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00260 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 47
          MA SA EKTLTG+ NLIRLLPTGTVFLFQFLSPILTNSG+ EPINK
Sbjct: 1  MATSATEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGHCEPINK 46

[Close]

BLAST of IVF0001675 vs. ExPASy TrEMBL
Match: A0A5A7U2F8 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G006730 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 47
          MA SA EKTLTG+ NLIRLLPTGTVFLFQFLSPILTNSG+ EPINK
Sbjct: 1  MATSATEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGHCEPINK 46

[Close]

BLAST of IVF0001675 vs. NCBI nr
Match: KAG6597481.1 (Protein DMP2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.9 bits (198), Expect = 2.70e-17
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 46
          MAASA EKTLTG+ NLIRLLPTGTVFLFQFLSPILTNSG  EPINK
Sbjct: 1  MAASATEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGQCEPINK 46

[Close]

BLAST of IVF0001675 vs. NCBI nr
Match: KAG7028940.1 (hypothetical protein SDJN02_10123, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 80.9 bits (198), Expect = 6.19e-17
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 46
          MAASA EKTLTG+ NLIRLLPTGTVFLFQFLSPILTNSG  EPINK
Sbjct: 1  MAASATEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGQCEPINK 46

[Close]

BLAST of IVF0001675 vs. NCBI nr
Match: XP_022973688.1 (protein DMP2-like [Cucurbita maxima])

HSP 1 Score: 80.9 bits (198), Expect = 6.19e-17
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 46
          MAASA EKTLTG+ NLIRLLPTGTVFLFQFLSPILTNSG  EPINK
Sbjct: 1  MAASATEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGQCEPINK 46

[Close]

BLAST of IVF0001675 vs. NCBI nr
Match: KAA0049424.1 (putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 8.20e-17
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 46
          MA SA EKTLTG+ NLIRLLPTGTVFLFQFLSPILTNSG+ EPINK
Sbjct: 1  MATSATEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGHCEPINK 46

[Close]

BLAST of IVF0001675 vs. NCBI nr
Match: TYK16102.1 (putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 9.29e-17
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 46
          MA SA EKTLTG+ NLIRLLPTGTVFLFQFLSPILTNSG+ EPINK
Sbjct: 1  MATSATEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGHCEPINK 46

[Close]

BLAST of IVF0001675 vs. TAIR 10
Match: AT3G21550.1 (DUF679 domain membrane protein 2 )

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-08
Identity = 25/40 (62.50%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 7  EKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 47
          ++T +G+ +LI+LLPTGTVFLFQFL+P+LTN+G+   INK
Sbjct: 10 DRTYSGVGDLIKLLPTGTVFLFQFLNPVLTNNGHCLLINK 49

[Close]

BLAST of IVF0001675 vs. TAIR 10
Match: AT3G21520.1 (DUF679 domain membrane protein 1 )

HSP 1 Score: 47.8 bits (112), Expect = 4.2e-06
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 8  KTLTGIRNLIRLLPTGTVFLFQFLSPILTNSGYREPINK 47
          K+LTG+ +LI+LLPTGT+F++  L+P+LTN G     NK
Sbjct: 25 KSLTGLESLIKLLPTGTLFIYLLLNPVLTNDGECSTGNK 63

[Close]

BLAST of IVF0001675 vs. TAIR 10
Match: AT5G46090.1 (Protein of unknown function (DUF679) )

HSP 1 Score: 42.7 bits (99), Expect = 1.4e-04
Identity = 22/39 (56.41%), Postives = 23/39 (58.97%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSG 40
          M   A+ KT     NL  LLPTGTV  FQ LSPI TN G
Sbjct: 37 MMQKAIGKTFQTTANLANLLPTGTVLAFQILSPICTNVG 75

[Close]

BLAST of IVF0001675 vs. TAIR 10
Match: AT3G02430.1 (Protein of unknown function (DUF679) )

HSP 1 Score: 42.4 bits (98), Expect = 1.8e-04
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 0


Query: 1  MAASAVEKTLTGIRNLIRLLPTGTVFLFQFLSPILTNSG 40
          M+  A+  TLT   NL  LLPTGT+  FQ L+P+ T++G
Sbjct: 36 MSQRAMSNTLTSAANLSNLLPTGTLLAFQLLTPVFTSNG 74

The following BLAST results are available for this feature:

BLAST of IVF0001675 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVF1	1.7e-07	62.50	Protein DMP2 OS=Arabidopsis thaliana OX=3702 GN=DMP2 PE=2 SV=1	[more]
Q9LVF4	5.9e-05	53.85	Protein DMP1 OS=Arabidopsis thaliana OX=3702 GN=DMP1 PE=2 SV=1	[more]

BLAST of IVF0001675 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IDW7	1.4e-12	89.13	protein DMP2-like OS=Cucurbita maxima OX=3661 GN=LOC111472274 PE=3 SV=1	[more]
A0A6J1IK18	1.4e-12	89.13	protein DMP2-like OS=Cucurbita maxima OX=3661 GN=LOC111475715 PE=3 SV=1	[more]
A0A6J1GS26	1.4e-12	89.13	protein DMP2-like OS=Cucurbita moschata OX=3662 GN=LOC111456470 PE=3 SV=1	[more]
A0A5D3CX53	1.8e-12	86.96	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7U2F8	1.8e-12	86.96	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of IVF0001675 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597481.1	2.70e-17	89.13	Protein DMP2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7028940.1	6.19e-17	89.13	hypothetical protein SDJN02_10123, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022973688.1	6.19e-17	89.13	protein DMP2-like [Cucurbita maxima]	[more]
KAA0049424.1	8.20e-17	86.96	putative transmembrane protein [Cucumis melo var. makuwa]	[more]
TYK16102.1	9.29e-17	86.96	putative transmembrane protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0001675 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21550.1	1.2e-08	62.50	DUF679 domain membrane protein 2	[more]
AT3G21520.1	4.2e-06	53.85	DUF679 domain membrane protein 1	[more]
AT5G46090.1	1.4e-04	56.41	Protein of unknown function (DUF679)	[more]
AT3G02430.1	1.8e-04	48.72	Protein of unknown function (DUF679)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007770	Protein DMP	PFAM	PF05078	DUF679	coord: 13..46 e-value: 5.9E-8 score: 32.8
IPR007770	Protein DMP	PANTHER	PTHR31621	PROTEIN DMP3	coord: 4..47
None	No IPR available	PANTHER	PTHR31621:SF66	EXPRESSED PROTEIN	coord: 4..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001675.1	IVF0001675.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010256	endomembrane system organization
cellular_component	GO:0016021	integral component of membrane