IVF0001669 (gene) Melon (IVF77) v1

Overview
NameIVF0001669
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionBURP domain-containing protein 5-like
Locationchr12: 8205292 .. 8205474 (-)
RNA-Seq ExpressionIVF0001669
SyntenyIVF0001669
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTGTGAAGTTTCTCCTATCAAAGAGGAAGAAAGATATTGTGCAGCGTCATTAGAGTACATCGTAGGTGTCGCAATCATGAAGATGGGGAAGGAAGTTACAGCACTGTCATCTATATTGGTGGACGGAATGAACCCAAAGTATTCAAAAGTTTTGACGGTGGTGGAGAAGTTGATGTAA

mRNA sequence

ATGGATTGTGAAGTTTCTCCTATCAAAGAGGAAGAAAGATATTGTGCAGCGTCATTAGAGTACATCGTAGGTGTCGCAATCATGAAGATGGGGAAGGAAGTTACAGCACTGTCATCTATATTGGTGGACGGAATGAACCCAAAGTATTCAAAAGTTTTGACGGTGGTGGAGAAGTTGATGTAA

Coding sequence (CDS)

ATGGATTGTGAAGTTTCTCCTATCAAAGAGGAAGAAAGATATTGTGCAGCGTCATTAGAGTACATCGTAGGTGTCGCAATCATGAAGATGGGGAAGGAAGTTACAGCACTGTCATCTATATTGGTGGACGGAATGAACCCAAAGTATTCAAAAGTTTTGACGGTGGTGGAGAAGTTGATGTAA

Protein sequence

MDCEVSPIKEEERYCAASLEYIVGVAIMKMGKEVTALSSILVDGMNPKYSKVLTVVEKLM
Homology
BLAST of IVF0001669 vs. ExPASy TrEMBL
Match: A0A1S3BQR7 (BURP domain-containing protein 5-like OS=Cucumis melo OX=3656 GN=LOC103492683 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-12
Identity = 41/58 (70.69%), Postives = 46/58 (79.31%), Query Frame = 0

Query: 1   MDCEVSPIKEEERYCAASLEYIVGVAIMKMGKEVTALSSILVDGMNPKYSKVLTVVEK 59
           MDCEV PIK EERYCA SLE +V V IMKMGKEV  +S+ + DGMNP YS+V TVVEK
Sbjct: 125 MDCEVPPIKGEERYCATSLESMVDVVIMKMGKEVKVMSATVEDGMNPTYSQVSTVVEK 182

BLAST of IVF0001669 vs. ExPASy TrEMBL
Match: A0A5A7ST74 (BURP domain-containing protein 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00670 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.1e-05
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0

Query: 25 VAIMKMGKEVTALSSILVDGMNPKYSKVLTVVEKLM 61
          VAIMKMGKEVT LS+I+VDGMN KYSKV TVVEK M
Sbjct: 16 VAIMKMGKEVTPLSAIVVDGMNSKYSKVSTVVEKSM 51

BLAST of IVF0001669 vs. NCBI nr
Match: XP_008451378.1 (PREDICTED: BURP domain-containing protein 5-like [Cucumis melo])

HSP 1 Score: 80.1 bits (196), Expect = 3.29e-16
Identity = 41/58 (70.69%), Postives = 46/58 (79.31%), Query Frame = 0

Query: 1   MDCEVSPIKEEERYCAASLEYIVGVAIMKMGKEVTALSSILVDGMNPKYSKVLTVVEK 58
           MDCEV PIK EERYCA SLE +V V IMKMGKEV  +S+ + DGMNP YS+V TVVEK
Sbjct: 125 MDCEVPPIKGEERYCATSLESMVDVVIMKMGKEVKVMSATVEDGMNPTYSQVSTVVEK 182

BLAST of IVF0001669 vs. NCBI nr
Match: KAA0032557.1 (BURP domain-containing protein 5-like [Cucumis melo var. makuwa] >TYK20924.1 BURP domain-containing protein 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 2.70e-08
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0

Query: 25 VAIMKMGKEVTALSSILVDGMNPKYSKVLTVVEKLM 60
          VAIMKMGKEVT LS+I+VDGMN KYSKV TVVEK M
Sbjct: 16 VAIMKMGKEVTPLSAIVVDGMNSKYSKVSTVVEKSM 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BQR71.2e-1270.69BURP domain-containing protein 5-like OS=Cucumis melo OX=3656 GN=LOC103492683 PE... [more]
A0A5A7ST744.1e-0583.33BURP domain-containing protein 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
Match NameE-valueIdentityDescription
XP_008451378.13.29e-1670.69PREDICTED: BURP domain-containing protein 5-like [Cucumis melo][more]
KAA0032557.12.70e-0883.33BURP domain-containing protein 5-like [Cucumis melo var. makuwa] >TYK20924.1 BUR... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004873BURP domainPFAMPF03181BURPcoord: 2..57
e-value: 3.7E-7
score: 30.0
IPR004873BURP domainPROSITEPS51277BURPcoord: 1..60
score: 10.456088

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001669.1IVF0001669.1mRNA