IVF0001590 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGCCTATCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAGCAAGAAGCATTTTGTGGACTATGTGGCTCAAAAGTTGAGGGATAAATCCATACTTTCAAAACCCCACTTTGTTCAACAGGAAATCAAACTTGCTCGGCATTACACATTTCTACTTAACAGTATGCACCATCAAAAGGCAATAAGACTTCACTCTCAGCTCAGATCACGAAGAAACAAACTTTTCTTTCTTCCTCATTTGATCTTGTTTACAATTGTAATTGACATGGGCTATGATGCAGGACTTGCTGTTCTCGTACAACATTGCTGTTGATCGTTCAGATGAAATGAAGCGAATATTGGGGAAGTCTGCAGCAAGTGTGGGGCTTTCACTTCCTGAGGTTTATCAAACCTGA ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGCCTATCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAGCAAGAAGCATTTTGTGGACTATGTGGCTCAAAAGTTGAGGGATAAATCCATACTTTCAAAACCCCACTTTGTTCAACAGGAAATCAAACTTGCTCGGCATTACACATTTCTACTTAACAGTATGCACCATCAAAAGGACTTGCTGTTCTCGTACAACATTGCTGTTGATCGTTCAGATGAAATGAAGCGAATATTGGGGAAGTCTGCAGCAAGTGTGGGGCTTTCACTTCCTGAGGTTTATCAAACCTGA ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGCCTATCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAGCAAGAAGCATTTTGTGGACTATGTGGCTCAAAAGTTGAGGGATAAATCCATACTTTCAAAACCCCACTTTGTTCAACAGGAAATCAAACTTGCTCGGCATTACACATTTCTACTTAACAGTATGCACCATCAAAAGGACTTGCTGTTCTCGTACAACATTGCTGTTGATCGTTCAGATGAAATGAAGCGAATATTGGGGAAGTCTGCAGCAAGTGTGGGGCTTTCACTTCCTGAGGTTTATCAAACCTGA MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASVGLSLPEVYQT Homology
BLAST of IVF0001590 vs. ExPASy TrEMBL
Match: A0A0A0L9E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645910 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47 Identity = 101/109 (92.66%), Postives = 105/109 (96.33%), Query Frame = 0
BLAST of IVF0001590 vs. ExPASy TrEMBL
Match: A0A6J1EY92 (uncharacterized protein LOC111439884 OS=Cucurbita moschata OX=3662 GN=LOC111439884 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.0e-45 Identity = 98/109 (89.91%), Postives = 103/109 (94.50%), Query Frame = 0
BLAST of IVF0001590 vs. ExPASy TrEMBL
Match: A0A6J1HS51 (uncharacterized protein LOC111467294 OS=Cucurbita maxima OX=3661 GN=LOC111467294 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 7.4e-45 Identity = 97/109 (88.99%), Postives = 102/109 (93.58%), Query Frame = 0
BLAST of IVF0001590 vs. ExPASy TrEMBL
Match: A0A5D3BQE5 (Complex1_LYR domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00940 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.9e-42 Identity = 98/107 (91.59%), Postives = 99/107 (92.52%), Query Frame = 0
BLAST of IVF0001590 vs. ExPASy TrEMBL
Match: A0A6J1C0V5 (uncharacterized protein LOC111006395 OS=Momordica charantia OX=3673 GN=LOC111006395 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39 Identity = 87/109 (79.82%), Postives = 98/109 (89.91%), Query Frame = 0
BLAST of IVF0001590 vs. NCBI nr
Match: XP_004144434.1 (uncharacterized protein LOC101204721 [Cucumis sativus] >XP_031739411.1 uncharacterized protein LOC101204721 [Cucumis sativus] >KGN58453.1 hypothetical protein Csa_001238 [Cucumis sativus]) HSP 1 Score: 198 bits (504), Expect = 1.22e-63 Identity = 101/109 (92.66%), Postives = 105/109 (96.33%), Query Frame = 0
BLAST of IVF0001590 vs. NCBI nr
Match: XP_022933120.1 (uncharacterized protein LOC111439884 [Cucurbita moschata] >XP_022933121.1 uncharacterized protein LOC111439884 [Cucurbita moschata]) HSP 1 Score: 191 bits (486), Expect = 6.77e-61 Identity = 98/109 (89.91%), Postives = 103/109 (94.50%), Query Frame = 0
BLAST of IVF0001590 vs. NCBI nr
Match: XP_022967927.1 (uncharacterized protein LOC111467294 [Cucurbita maxima] >XP_022967928.1 uncharacterized protein LOC111467294 [Cucurbita maxima] >KAG6603158.1 hypothetical protein SDJN03_03767, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189 bits (481), Expect = 3.92e-60 Identity = 97/109 (88.99%), Postives = 102/109 (93.58%), Query Frame = 0
BLAST of IVF0001590 vs. NCBI nr
Match: XP_038889144.1 (uncharacterized protein LOC120079034 [Benincasa hispida]) HSP 1 Score: 188 bits (478), Expect = 1.12e-59 Identity = 98/109 (89.91%), Postives = 101/109 (92.66%), Query Frame = 0
BLAST of IVF0001590 vs. NCBI nr
Match: XP_023544932.1 (uncharacterized protein LOC111804382 [Cucurbita pepo subsp. pepo] >XP_023544933.1 uncharacterized protein LOC111804382 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184 bits (467), Expect = 5.35e-58 Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of IVF0001590 vs. TAIR 10
Match: AT5G51960.1 (CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 45 Blast hits to 45 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 124.0 bits (310), Expect = 7.4e-29 Identity = 64/109 (58.72%), Postives = 82/109 (75.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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