IVF0001574 (gene) Melon (IVF77) v1

Overview


Name	IVF0001574
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Myb transcription factor
Location	chr06: 277923 .. 280130 (-)
RNA-Seq Expression	IVF0001574
Synteny	IVF0001574

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTGATAGAACTTTGTTCTTGGGGAGGGTTCTTTAGATGAGCTTTCGGCCATAGACGTAGCCTAATATCTTTCTTGCTACGTATAATTAGTGAGGACAAATATTTTTAATAGTTTGGGTTTTGTATGAATGATCCCTCGTATACGTATTTATGATCGTTGTTACACTACTCACAAAAAAATGATTTATAACATTTTGCTTACGTTATATTCCACTATCTCATTTTGTTATATACTAACGAGATGGGACAACCATTCCTATCGCAATCTCTAATTTTTTTAAAAAAAATTAATAAAATGAAAGAAAGAAACCCAACATACATTTAATAACATATAACATTAGAGATATTAGGTTATTACGTAAGCAAAATGTTATAAATCATAACTTTTGAAAAGTGGTGGGTCATCAATCATGAACGTCTTCCTTTATAAATCAGTCCTGAAGCAAAGTTACGAGAATTCTATCTAAAATCAATAATATAACGTGGACATATGTGGAGTTCCATTTTCATATTTTAAAGGTTTCTTTTTTACTATGGTTGAAATGAAAAATAATGAGAAGACGTAAAAATAGAAAAACAGAGTATAAAAGGGGAAGCCAAGATGAAAAGAGCTTAAACAATAAAAACTTGGTAGAAAATCAAAGAAGAGAAAGAGAGATGGGATGTAGAGAAACAGAGAAAGAAAAAGTGAAGAAGAAAGGATTATGGTCACCTGAGGAAGATGAAAAGTTAAGAAGCTTCATCCTCAAGAATGGCCATGGCTGCTGGACCTCTGTCCCCATTAAAGCTGGTGAAGCATGCTTTTTTCCCTTCCACTCCCCCAATCGATTATTCTTTGTATTCATAAACATTAAAATTTTGAACCCTTCTTGGTAATTACAAGTGCAGGATTATTAAGAAACTCAAAGAGCTGCAGATTGAGATGGTTCAATTACTTGAGGCCAGGGCTGAAAAGAGGAATGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGGTAAATCTAAAATCTTTAACTAGTTCGGGTACCATGTTTAAATTATTGATGGATTAGGATGATGATTTCAATTAGGTGGTCTCAAATAGCACAGCATTTAGCGGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCTCATCTCAAGAAGAAAGTGGTCTCGAATCGAGATCCGCCGTTGGAGGGGATGGGAAGTTCGGGCAGTGAGCGGAGTGAAACCCGACCAAGGGTCTTGTTTGCTGAATGGCTTTCTGTGTCTGATATTAATAGTGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAACAACAAGTAGAGAGGGCTATGGCTTTGAGATGCTCAATTGGGACCTTGATTTGAGGGACACATTTCTGATGGCTTTGCAACTTGTGATGAACTGTGGTAAAATAATTATTTGATCTTTTCCAAAATTAAATTTGCAACATTCATTCTAATACGAAGAACATAGTAAGAAATATGTTTATTACATGATATACTAATTCTATCTTGATCTATTGATTAATTTAAAGATTTTGTATTAATTAATAATTTAATTGGATATCAGAGTAAGCTGTTCAAGAGGTTGTGTTTAAACCCCGACCTACAAGTAAAAAATATGTTAAGTGATATAATATTAAGTTTATGTGTCCAAACCTCAGTCGACAAGTAAGAGAAATGTTATATGATATAATGTTAAATTTATTTCACCGATTCACAACGTGAAAGAAGATTAACTTTTCTTTGAATTAAGCTTATCATTTTTTTTTTGGACTAATTTGGTAGAAACAAATTAAAATCTACATGCATCTTTTGATTGTAGTATTATTTATGAAAGCAAAATGGTTAATTAAGCTATGATTTTAGGTTTGGAAAAGAAAGTGAATGACAAGTCTTATATTGGTCTTCTAAAGGGGCATATTTTTCTCCCACGTACCAATTTGTTCGATTGGAGTCTCTTTTCTGGTTCGAATGTAGTCGAGAACAATCGGACTAAAAGGTGGAAGCAAGAAGCAAGGGCTCGAGAAGGAAGGTCGTTTTACGAGGGTATCCATCATGAACTTGGCGGCTAAGCCTTGGTTAGGGCAAGCCAAATCGTCCCAGGAAATTTCAGTAGCATTTGGTGGGATGGTTGGCTTGAAAGTTAAGAGCTTGGAGTATTCATTTAGACTATGA

mRNA sequence

ATGGAACGTAAAAATAGAAAAACAGAGTATAAAAGGGGAAGCCAAGATGAAAAGAGCTTAAACAATAAAAACTTGGTAGAAAATCAAAGAAGAGAAAGAGAGATGGGATATGAAAAGTTAAGAAGCTTCATCCTCAAGAATGGCCATGGCTGCTGGACCTCTGTCCCCATTAAAGCTGGATTATTAAGAAACTCAAAGAGCTGCAGATTGAGATGGTTCAATTACTTGAGGCCAGGGCTGAAAAGAGGAATGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGGTGGTCTCAAATAGCACAGCATTTAGCGGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCTCATCTCAAGAAGAAAGTGGTCTCGAATCGAGATCCGCCGTTGGAGGGGATGGGAAGTTCGGGCAGTGAGCGGAGTGAAACCCGACCAAGGGTCTTGTTTGCTGAATGGCTTTCTGTGTCTGATATTAATAGTGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAACAACAAGTAGAGAGGGCTATGGCTTTGAGATGCTCAATTGGGACCTTGATTTGAGGGACACATTTCTGATGGCTTTTATTATTTATGAAAGCAAAATGTCGAGAACAATCGGACTAAAAGGTGGAAGCAAGAAGCAAGGGCTCGAGAAGGAAGGTCGTTTTACGAGGGTATCCATCATGAACTTGGCGGCTAAGCCTTGGTTAGGGCAAGCCAAATCGTCCCAGGAAATTTCAGTAGCATTTGGTGGGATGGTTGGCTTGAAAGTTAAGAGCTTGGAGTATTCATTTAGACTATGA

Coding sequence (CDS)

ATGGAACGTAAAAATAGAAAAACAGAGTATAAAAGGGGAAGCCAAGATGAAAAGAGCTTAAACAATAAAAACTTGGTAGAAAATCAAAGAAGAGAAAGAGAGATGGGATATGAAAAGTTAAGAAGCTTCATCCTCAAGAATGGCCATGGCTGCTGGACCTCTGTCCCCATTAAAGCTGGATTATTAAGAAACTCAAAGAGCTGCAGATTGAGATGGTTCAATTACTTGAGGCCAGGGCTGAAAAGAGGAATGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGGTGGTCTCAAATAGCACAGCATTTAGCGGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCTCATCTCAAGAAGAAAGTGGTCTCGAATCGAGATCCGCCGTTGGAGGGGATGGGAAGTTCGGGCAGTGAGCGGAGTGAAACCCGACCAAGGGTCTTGTTTGCTGAATGGCTTTCTGTGTCTGATATTAATAGTGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAACAACAAGTAGAGAGGGCTATGGCTTTGAGATGCTCAATTGGGACCTTGATTTGAGGGACACATTTCTGATGGCTTTTATTATTTATGAAAGCAAAATGTCGAGAACAATCGGACTAAAAGGTGGAAGCAAGAAGCAAGGGCTCGAGAAGGAAGGTCGTTTTACGAGGGTATCCATCATGAACTTGGCGGCTAAGCCTTGGTTAGGGCAAGCCAAATCGTCCCAGGAAATTTCAGTAGCATTTGGTGGGATGGTTGGCTTGAAAGTTAAGAGCTTGGAGTATTCATTTAGACTATGA

Protein sequence

MERKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGYEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLDLRDTFLMAFIIYESKMSRTIGLKGGSKKQGLEKEGRFTRVSIMNLAAKPWLGQAKSSQEISVAFGGMVGLKVKSLEYSFRL

Homology

[Close]

BLAST of IVF0001574 vs. ExPASy Swiss-Prot
Match: Q9M0K4 (Transcription factor LAF1 OS=Arabidopsis thaliana OX=3702 GN=LAF1 PE=1 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 2.2e-37
Identity = 72/93 (77.42%), Postives = 78/93 (83.87%), Query Frame = 0


Query: 38  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 97
           EKLRSFIL  GH CWT+VPIKAGL RN KSCRLRW NYLRPGLKR M S +E+E ILT H
Sbjct: 21  EKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFH 80

Query: 98  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKK 131
             LGN+WSQIA+ L GRTDNEIKNYW+SHLKKK
Sbjct: 81  SSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKK 113

[Close]

BLAST of IVF0001574 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 64/94 (68.09%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 38  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 97
           EKL + I+++G GCW+SVP  A L R  KSCRLRW NYLRP LKRG FSQQE++ I+ LH
Sbjct: 25  EKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALH 84

Query: 98  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKV 132
           ++LGNRWSQIA HL GRTDNEIKN+WNS +KKK+
Sbjct: 85  QILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKL 118

[Close]

BLAST of IVF0001574 vs. ExPASy Swiss-Prot
Match: Q42379 (Transcription factor MYB7 OS=Arabidopsis thaliana OX=3702 GN=MYB7 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-32
Identity = 66/116 (56.90%), Postives = 83/116 (71.55%), Query Frame = 0


Query: 38  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 97
           E+L S+I  +G GCW S+P  AGLLR  KSCRLRW NYLRP LKRG F+  EDE I+ LH
Sbjct: 23  ERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWINYLRPDLKRGNFTHDEDELIIKLH 82

Query: 98  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSETR 154
            LLGN+WS IA  L GRTDNEIKNYWN+H+K+K++S    P    G + ++ S+ +
Sbjct: 83  SLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLLSKGIDPATHRGINEAKISDLK 138

[Close]

BLAST of IVF0001574 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-32
Identity = 65/94 (69.15%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 38  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 97
           EKL ++I ++GHGCW+SVP  AGL R  KSCRLRW NYLRP LKRG FSQ E+  I+ LH
Sbjct: 23  EKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQDEESLIIELH 82

Query: 98  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKV 132
             LGNRWSQIA  L GRTDNEIKN+WNS LKKK+
Sbjct: 83  AALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKL 116

[Close]

BLAST of IVF0001574 vs. ExPASy Swiss-Prot
Match: Q9LTV4 (Transcription factor MYB10 OS=Arabidopsis thaliana OX=3702 GN=MYB10 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.1e-32
Identity = 62/95 (65.26%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 38  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 97
           E+LRSFILKNGH  W S+P  AGL+R  KSCRLRW NYLRPGLKRG F+++E++ I+ LH
Sbjct: 25  ERLRSFILKNGHQNWRSLPKLAGLMRCGKSCRLRWINYLRPGLKRGNFTKEEEDTIIHLH 84

Query: 98  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV 133
           +  GN+WS+IA +  GRTDNEIKN WN+HLKK++V
Sbjct: 85  QAYGNKWSKIASNFPGRTDNEIKNVWNTHLKKRLV 119

[Close]

BLAST of IVF0001574 vs. ExPASy TrEMBL
Match: A0A0A0L6I1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182040 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.9e-130
Identity = 248/299 (82.94%), Postives = 258/299 (86.29%), Query Frame = 0


Query: 1   MERKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGYEKLRSFILKNGHGCWTSVPIKAG 60
           M+ K  KTEYKRG Q+EKSLNNKNLVENQ RE EMGYEKLRSFILKNGHGCWTSVPIKAG
Sbjct: 1   MDIKIGKTEYKRGRQNEKSLNNKNLVENQGRETEMGYEKLRSFILKNGHGCWTSVPIKAG 60

Query: 61  LLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIK 120
           LLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIK
Sbjct: 61  LLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIK 120

Query: 121 NYWNSHLKKKVV-----------SNRDPPLEGMGSSGSERSETRPRVLFAEWLSVSDINS 180
           NYWNSHLKKKVV           SNRDPPLE MGSSG+ER E++PRVLFAEWLSVSD+N 
Sbjct: 121 NYWNSHLKKKVVLNFQDFKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNG 180

Query: 181 GSSMEGSFDGEGRRTTSREGYGFEMLNWDLDLRDTFLMAF-------IIYESKMSRTIGL 240
           GSSMEGSFDGEGRR TSREGYGFEMLNWDLD        F       IIYESKMSR  GL
Sbjct: 181 GSSMEGSFDGEGRRRTSREGYGFEMLNWDLDFEGHISDGFATCDQLCIIYESKMSRANGL 240

Query: 241 KGGSKKQGLEKEGRFTRVSIMNLAAKPWLGQAKSSQEISVAFGGMVGLKVKSLEYSFRL 282
           KGGSKKQGLEKEGRF RVSIM+LAAKP +GQAKS +EISVAFGGMVGLKVKSLEYSFR+
Sbjct: 241 KGGSKKQGLEKEGRFMRVSIMDLAAKPSVGQAKSFKEISVAFGGMVGLKVKSLEYSFRV 299

[Close]

BLAST of IVF0001574 vs. ExPASy TrEMBL
Match: A0A1S3AXV7 (transcription factor LAF1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484072 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 1.1e-103
Identity = 196/217 (90.32%), Postives = 197/217 (90.78%), Query Frame = 0


Query: 3   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGY-------------------EKLRSF 62
           RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMG                    EKLRSF
Sbjct: 4   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGCRETEKEKVKKKGLWSPEEDEKLRSF 63

Query: 63  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 122
           ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR
Sbjct: 64  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 123

Query: 123 WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSETRPRVLFAEWLS 182
           WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGS+RSETRPRVLFAEWLS
Sbjct: 124 WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLS 183

Query: 183 VSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 201
           VSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD
Sbjct: 184 VSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 220

[Close]

BLAST of IVF0001574 vs. ExPASy TrEMBL
Match: A0A1S3AY85 (transcription factor LAF1-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484072 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 9.9e-102
Identity = 196/223 (87.89%), Postives = 197/223 (88.34%), Query Frame = 0


Query: 3   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGY-------------------EKLRSF 62
           RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMG                    EKLRSF
Sbjct: 4   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGCRETEKEKVKKKGLWSPEEDEKLRSF 63

Query: 63  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGN- 122
           ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGN 
Sbjct: 64  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 123

Query: 123 -----RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSETRPRVL 182
                RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGS+RSETRPRVL
Sbjct: 124 MMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVL 183

Query: 183 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 201
           FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD
Sbjct: 184 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 226

[Close]

BLAST of IVF0001574 vs. ExPASy TrEMBL
Match: A0A1S3AYA7 (transcription factor LAF1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484072 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 9.9e-102
Identity = 196/223 (87.89%), Postives = 197/223 (88.34%), Query Frame = 0


Query: 3   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGY-------------------EKLRSF 62
           RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMG                    EKLRSF
Sbjct: 4   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGCRETEKEKVKKKGLWSPEEDEKLRSF 63

Query: 63  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGN- 122
           ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGN 
Sbjct: 64  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 123

Query: 123 -----RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSETRPRVL 182
                RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGS+RSETRPRVL
Sbjct: 124 MMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVL 183

Query: 183 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 201
           FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD
Sbjct: 184 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 226

[Close]

BLAST of IVF0001574 vs. ExPASy TrEMBL
Match: A0A1S3AYW8 (transcription factor LAF1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484072 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 9.9e-102
Identity = 196/223 (87.89%), Postives = 197/223 (88.34%), Query Frame = 0


Query: 3   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGY-------------------EKLRSF 62
           RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMG                    EKLRSF
Sbjct: 4   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGCRETEKEKVKKKGLWSPEEDEKLRSF 63

Query: 63  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGN- 122
           ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGN 
Sbjct: 64  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 123

Query: 123 -----RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSETRPRVL 182
                RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGS+RSETRPRVL
Sbjct: 124 MMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVL 183

Query: 183 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 201
           FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD
Sbjct: 184 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 226

[Close]

BLAST of IVF0001574 vs. NCBI nr
Match: XP_008439218.1 (PREDICTED: transcription factor LAF1-like isoform X2 [Cucumis melo])

HSP 1 Score: 389 bits (1000), Expect = 4.43e-134
Identity = 196/217 (90.32%), Postives = 197/217 (90.78%), Query Frame = 0


Query: 3   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGY-------------------EKLRSF 62
           RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMG                    EKLRSF
Sbjct: 4   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGCRETEKEKVKKKGLWSPEEDEKLRSF 63

Query: 63  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 122
           ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR
Sbjct: 64  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 123

Query: 123 WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSETRPRVLFAEWLS 182
           WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGS+RSETRPRVLFAEWLS
Sbjct: 124 WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLS 183

Query: 183 VSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 200
           VSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD
Sbjct: 184 VSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 220

[Close]

BLAST of IVF0001574 vs. NCBI nr
Match: XP_008439220.1 (PREDICTED: transcription factor LAF1-like isoform X4 [Cucumis melo])

HSP 1 Score: 383 bits (983), Expect = 1.25e-131
Identity = 196/223 (87.89%), Postives = 197/223 (88.34%), Query Frame = 0


Query: 3   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGY-------------------EKLRSF 62
           RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMG                    EKLRSF
Sbjct: 4   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGCRETEKEKVKKKGLWSPEEDEKLRSF 63

Query: 63  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 122
           ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR
Sbjct: 64  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 123

Query: 123 ------WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSETRPRVL 182
                 WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGS+RSETRPRVL
Sbjct: 124 MMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVL 183

Query: 183 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 200
           FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD
Sbjct: 184 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 226

[Close]

BLAST of IVF0001574 vs. NCBI nr
Match: XP_008439219.1 (PREDICTED: transcription factor LAF1-like isoform X3 [Cucumis melo])

HSP 1 Score: 383 bits (983), Expect = 1.29e-131
Identity = 196/223 (87.89%), Postives = 197/223 (88.34%), Query Frame = 0


Query: 3   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGY-------------------EKLRSF 62
           RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMG                    EKLRSF
Sbjct: 4   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGCRETEKEKVKKKGLWSPEEDEKLRSF 63

Query: 63  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 122
           ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR
Sbjct: 64  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 123

Query: 123 ------WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSETRPRVL 182
                 WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGS+RSETRPRVL
Sbjct: 124 MMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVL 183

Query: 183 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 200
           FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD
Sbjct: 184 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 226

[Close]

BLAST of IVF0001574 vs. NCBI nr
Match: XP_008439216.1 (PREDICTED: transcription factor LAF1-like isoform X1 [Cucumis melo])

HSP 1 Score: 383 bits (983), Expect = 2.12e-131
Identity = 196/223 (87.89%), Postives = 197/223 (88.34%), Query Frame = 0


Query: 3   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGY-------------------EKLRSF 62
           RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMG                    EKLRSF
Sbjct: 4   RKNRKTEYKRGSQDEKSLNNKNLVENQRREREMGCRETEKEKVKKKGLWSPEEDEKLRSF 63

Query: 63  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 122
           ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR
Sbjct: 64  ILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNR 123

Query: 123 ------WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSETRPRVL 182
                 WSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGS+RSETRPRVL
Sbjct: 124 MMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVL 183

Query: 183 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 200
           FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD
Sbjct: 184 FAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 226

[Close]

BLAST of IVF0001574 vs. NCBI nr
Match: XP_011652772.1 (LOW QUALITY PROTEIN: transcription factor LAF1 [Cucumis sativus])

HSP 1 Score: 321 bits (822), Expect = 1.35e-107
Identity = 155/174 (89.08%), Postives = 159/174 (91.38%), Query Frame = 0


Query: 38  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 97
           EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH
Sbjct: 23  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 82

Query: 98  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV-----------SNRDPPLEGMGSSG 157
           RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV           SNRDPPLE MGSSG
Sbjct: 83  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQDFKSGVFSNRDPPLEEMGSSG 142

Query: 158 SERSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFEMLNWDLD 200
           +ER E++PRVLFAEWLSVSD+N GSSMEGSFDGEGRR TSREGYGFEMLNWDLD
Sbjct: 143 NERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTSREGYGFEMLNWDLD 196

[Close]

BLAST of IVF0001574 vs. TAIR 10
Match: AT4G25560.1 (myb domain protein 18 )

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-38
Identity = 72/93 (77.42%), Postives = 78/93 (83.87%), Query Frame = 0


Query: 38  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 97
           EKLRSFIL  GH CWT+VPIKAGL RN KSCRLRW NYLRPGLKR M S +E+E ILT H
Sbjct: 21  EKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFH 80

Query: 98  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKK 131
             LGN+WSQIA+ L GRTDNEIKNYW+SHLKKK
Sbjct: 81  SSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKK 113

[Close]

BLAST of IVF0001574 vs. TAIR 10
Match: AT5G52260.1 (myb domain protein 19 )

HSP 1 Score: 155.2 bits (391), Expect = 7.6e-38
Identity = 72/111 (64.86%), Postives = 90/111 (81.08%), Query Frame = 0


Query: 38  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 97
           +KL+SFIL  GH CWT+VPI AGL RN KSCRLRW NYLRPGLKRG FS++E+E ILTLH
Sbjct: 23  QKLKSFILSRGHACWTTVPILAGLQRNGKSCRLRWINYLRPGLKRGSFSEEEEETILTLH 82

Query: 98  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSE 149
             LGN+WS+IA++L GRTDNEIKNYW+S+LKK+ + ++ P L+   S  +E
Sbjct: 83  SSLGNKWSRIAKYLPGRTDNEIKNYWHSYLKKRWLKSQ-PQLKSQISDLTE 132

[Close]

BLAST of IVF0001574 vs. TAIR 10
Match: AT3G48920.1 (myb domain protein 45 )

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-35
Identity = 84/194 (43.30%), Postives = 117/194 (60.31%), Query Frame = 0


Query: 15  QDEKSLNNKNLVENQRR-----EREMGYEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCR 74
           + EKS       E QR+     E +   EKLRS +LK GHGCW+++P++AGL RN KSCR
Sbjct: 4   KSEKSNREMKSKEKQRKGLWSPEED---EKLRSHVLKYGHGCWSTIPLQAGLQRNGKSCR 63

Query: 75  LRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKK 134
           LRW NYLRPGLK+ +F++QE+  +L+LH +LGN+WSQI++ L GRTDNEIKNYW+S+LKK
Sbjct: 64  LRWVNYLRPGLKKSLFTKQEETILLSLHSMLGNKWSQISKFLPGRTDNEIKNYWHSNLKK 123

Query: 135 KVV--------SNRDP----PLEGMGS--------------SGSERSETRPRVLFAEWLS 178
            V          ++ P     LE + S              S ++ S   P ++F+EWL 
Sbjct: 124 GVTLKQHETTKKHQTPLITNSLEALQSSTERSSSSINVGETSNAQTSSFSPNLVFSEWLD 183

[Close]

BLAST of IVF0001574 vs. TAIR 10
Match: AT5G16600.1 (myb domain protein 43 )

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-34
Identity = 66/114 (57.89%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 38  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 97
           +KL +FIL NGH CW ++P  +GLLR  KSCRLRW NYLRP LKRG+ S+ E++K++ LH
Sbjct: 23  KKLINFILTNGHCCWRALPKLSGLLRCGKSCRLRWINYLRPDLKRGLLSEYEEQKVINLH 82

Query: 98  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSERSE 152
             LGNRWS+IA HL GRTDNEIKN+WN+H+KKK+      PL     S  E S+
Sbjct: 83  AQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMGIDPLTHKPLSEQEASQ 136

[Close]

BLAST of IVF0001574 vs. TAIR 10
Match: AT3G13890.2 (myb domain protein 26 )

HSP 1 Score: 142.1 bits (357), Expect = 6.7e-34
Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 38  EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLH 97
           EKL ++I   GHGCW+SVP  AGL R  KSCRLRW NYLRP LKRG FS QE   I+ LH
Sbjct: 23  EKLINYINSYGHGCWSSVPKHAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELH 82

Query: 98  RLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSN 135
            +LGNRW+QIA+HL GRTDNE+KN+WNS +KKK++S+
Sbjct: 83  SILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLMSH 119

The following BLAST results are available for this feature:

BLAST of IVF0001574 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0K4	2.2e-37	77.42	Transcription factor LAF1 OS=Arabidopsis thaliana OX=3702 GN=LAF1 PE=1 SV=2	[more]
P20027	1.2e-32	68.09	Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3	[more]
Q42379	1.6e-32	56.90	Transcription factor MYB7 OS=Arabidopsis thaliana OX=3702 GN=MYB7 PE=1 SV=1	[more]
Q8LPH6	1.6e-32	69.15	Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1	[more]
Q9LTV4	2.1e-32	65.26	Transcription factor MYB10 OS=Arabidopsis thaliana OX=3702 GN=MYB10 PE=2 SV=1	[more]

BLAST of IVF0001574 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6I1	3.9e-130	82.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182040 PE=4 SV=1	[more]
A0A1S3AXV7	1.1e-103	90.32	transcription factor LAF1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348407...	[more]
A0A1S3AY85	9.9e-102	87.89	transcription factor LAF1-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC10348407...	[more]
A0A1S3AYA7	9.9e-102	87.89	transcription factor LAF1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC10348407...	[more]
A0A1S3AYW8	9.9e-102	87.89	transcription factor LAF1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348407...	[more]

BLAST of IVF0001574 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439218.1	4.43e-134	90.32	PREDICTED: transcription factor LAF1-like isoform X2 [Cucumis melo]	[more]
XP_008439220.1	1.25e-131	87.89	PREDICTED: transcription factor LAF1-like isoform X4 [Cucumis melo]	[more]
XP_008439219.1	1.29e-131	87.89	PREDICTED: transcription factor LAF1-like isoform X3 [Cucumis melo]	[more]
XP_008439216.1	2.12e-131	87.89	PREDICTED: transcription factor LAF1-like isoform X1 [Cucumis melo]	[more]
XP_011652772.1	1.35e-107	89.08	LOW QUALITY PROTEIN: transcription factor LAF1 [Cucumis sativus]	[more]

BLAST of IVF0001574 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25560.1	1.5e-38	77.42	myb domain protein 18	[more]
AT5G52260.1	7.6e-38	64.86	myb domain protein 19	[more]
AT3G48920.1	2.1e-35	43.30	myb domain protein 45	[more]
AT5G16600.1	3.9e-34	57.89	myb domain protein 43	[more]
AT3G13890.2	6.7e-34	65.98	myb domain protein 26	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 34..78 e-value: 7.8 score: 10.1 coord: 81..129 e-value: 1.6E-15 score: 67.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 38..76 score: 6.086305
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 77..127 score: 10.789328
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 85..127 e-value: 3.43652E-11 score: 55.2742
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 38..76 e-value: 0.00392477 score: 32.5474
None	No IPR available	GENE3D	1.10.10.60		coord: 31..81 e-value: 1.1E-9 score: 40.1
None	No IPR available	GENE3D	1.10.10.60		coord: 83..151 e-value: 4.9E-21 score: 76.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR47997	MYB DOMAIN PROTEIN 55	coord: 38..154
None	No IPR available	PANTHER	PTHR47997:SF11	MYB TRANSCRIPTION FACTOR	coord: 38..154
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 82..127 e-value: 2.9E-14 score: 53.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 77..131 score: 25.738262
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 63..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001574.1	IVF0001574.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000494	box C/D RNA 3'-end processing
biological_process	GO:1990258	histone glutamine methylation
biological_process	GO:0031167	rRNA methylation
cellular_component	GO:0031428	box C/D RNP complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:1990259	histone-glutamine methyltransferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008649	rRNA methyltransferase activity