IVF0001502 (gene) Melon (IVF77) v1

Overview


Name	IVF0001502
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	polyadenylate-binding protein RBP47-like
Location	chr07: 2393797 .. 2397157 (+)
RNA-Seq Expression	IVF0001502
Synteny	IVF0001502

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGCAACGGTTCTGATTCGCAGCCACAGGAACCAAATCAACGGCATCAACAACAGCCGCAGCCATGGATACCGCCAATGCAGTACCCGCCGCCGCCCATGGTAATGCCGCATCATATGATGACGCCGCAACATTATATGGCGCCGCCGTTACCGCCGCCGTATATGCATTATCATCACCAGTATCACCACCATCATCTCCCTATTCAACATTCGCAACCGCTGAAGGGATCTGGTAGTGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTTCATTCCTGCTTCTCTTCTGTCGGCGAGGTTCGATTTCTATCTTCTTTCCTATTATCTCTTTTTTTTTTAAGCGTTTTGTAGTTTGGTGATTAATGTGTAACATTCGCTGTCTGTACGTTACTAATCTTATAAGTTGTTACGATGAATCGATGATGGGTTATTTGCTGACTTGCTGGAATTTTCGTCGTTGAAGTTCTCGATTAAATCGGGTTTTAGAAAGTGATACATTCTCTTTGTTATAGTAAGGGTGTAAATATGAATGTTTCCTTAGTTTCTTATTTTGATGATTTTGTTTTTTTGGTGGTTTCCGTACTTGATTGTCGTTGTTCAATTTCAACACGAAAGAGCAGAACTAAATGACAATTATAAATTTGATCAAATATTTGGTTTGGTTTTGGAAAATTAAAAAACAGTTTTTGCTACTCTGAGGCAGTGAACATTACTGGAATTGTCTGTTGCAGATTTACTTACATTTTTTTGATATCAGTAAGCTAGAGAAGAATCTGCTTAAAAATGTAGCACTGTATTTTGTCAAAATGTTTTTGGAATTAAATAATTATGAATGAGAGATTTGGCAGTATGTTTTAAGACTTTTAGTCCTGTTTAGAATGACTGTATCTCCCGACCTCTCAAATTCACAGCATATTGAAAAATATTGTGAAAAGTATATGAAGAAATACTATAGTAGGTTATGTTGTTAGTAAATGAAAGAATACATCCTCTAGTATTGACATTGACATCCCGTAGTGTTGTGTGACAATCTTTTTTCTTGTTGAAATTTTTGAATTGTTCTTTGTTGACATGATCACATTGAACATTGATTGTTCTATTTTCTGTATGATGCAGATTTCGTCTATGAAAGTCATTCGTAATAAGCAAACTGGTTGTCTGAAGGGTATGGATTTGTAGAATTTTTATCTCATGCAACAGCTGAGAAGTTCTTCAAAACTATCTGGAATGTTCATGCCAAGTACAGAGCAGACTTCCGCCTGAATTGGGCGACATTTAGTACTGGTGACAAGCGATCAGATAATGATCCTGATCTTTTTCTATTTTGTTGGAGACTTAGCTGCAGATGTTACCGATTCTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCTGTTAAAGCAGCAAAAGTTGTGATTGATCAACATGGTCGTTCAAAGGGCTATGGTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACTGAAATGAATGGTATATATTGTTCAAGCGACCCATGCGCATTGGTGCTGCGACACCCAGAAAGTCTTCTGGATATCAGCAGCAGCATTCTTCACAAGGAGGTATGTTTAAATTTTATGGTTTAGTGTGCTTAGCCTAGAACCACTTCCAAGAAGGATAGGATTGGATTATTATTTGGGGAGGGTGTGCAGTTCTGGGGTAAATAAAAATATGAAAGGTTTCTTTTCTCCTCAGGACATTTGGTTTAGATTTGAGGTTATGTATCAAAAAAAGTTATGAAAATGAGAACTATATACTAACAAAGAGGTGGTGCAGTTTGATTTCGTTTTACTTAGAAATTTTGGTGAGGTTAATGTTTGTCTGTCAAAACATAATGTTAGATTACAAAAGACCTAAACTATCCATTATACTATGCTCAAACAGGGGTTGCAAGTCAGTTTACTTCCTTTGCGTGTAATTCAGGCTGAAGATATTGTCTATTTGTTATAATTTTTCATTTTCAGGCATCCTATAATGCAACATATATTTATTTAAGTGATTTCTTTTCTGACGCCCTTTTTATTCATAAGATAGGCCATCCAGTGTAAACTTGTGTTAGCAAGTTTTGAATTGGAGCCATTGTATGGTAGGAGACAACATTAGAGTAATCTAAATTATCCTAGAGCAAAATAGTATGCAAAACTATCTTACTTTTCGAAATTATTGTTAGTTTGGGTATGACTTCATTTTCTCTTCTCATTTCAATCCAAATGAAACAATTTTAAGGATTTTTTTTTCTTTGAATGCCTAATTTCTTAGGGTTTACTCATGCCTTGTGAACTGCTTATATATATGCTGTCCTTTGGTTTTTATAGGAGGATATTCGACAAATGGTTACTTTAGCCAAGGTCTCCAATCTGAAGGAGATTCTGCAAATACAACTGTGAGTTGCTTTGGTTTTTTGTTTGCATGGCTAGATAAACCACCTTCTATTCTTGGGTTAACCTGAGCTTTCCTTTTAGATATTTGTTGGAGGACTTGATCCTAATGTCACCGATGAAGATCTGAGGCAACCTTTCTCGCAGCACGGTGAGATTGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGATTTGTCCAATTTGCCAACAGGTAAAAAGTTATTAATCAGGTTTTCCTATCATATAAACAATGAAATAGTATATCCATCTGGTTATTAGTTTGTTAACAAATAAGTTACTAATTTCTGTTGGCATAATCTTCTCAATTTTCCTTTTCAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGGAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGGCAACCCTTCTCTCCTAATTTTAAAATGATAACAAAAGAACTATGCATATTAAGTCCGAACTTTACTTTGGTTGACGAATTTCCATGTTTAATCTTTTGTGCTTGAAAAAAGAAGTCTTTGCCTAACTAAAAACTCATGGTAGCTTGTTTCCTTTTTGTCTAAACTCTTCCACAATTACAGAACTATATTCGGGAACACAAAATAGAGAAATACCATTGCTTCTGAATTCTTATCATCAGACTCTGTTCGATTTAGTTAGTTAAATCAAACTTTAACAGTATTTTTCTTGCATTTGTTGAGGTCTAACAGTTCAGAGAGTTTGGTAACCAATGGAATGGAGCTTACTACGGAGGGCACATATATGATGGATATGGATATGGGTTGGCATCTCCTCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTATACTGTCTACGGAAACCATCAGCAACAAGTAGAACAGATGAAGTTACTTTAG

mRNA sequence

ATGCAAAGCAACGGTTCTGATTCGCAGCCACAGGAACCAAATCAACGGCATCAACAACAGCCGCAGCCATGGATACCGCCAATGCAGTACCCGCCGCCGCCCATGGTAATGCCGCATCATATGATGACGCCGCAACATTATATGGCGCCGCCGTTACCGCCGCCGTATATGCATTATCATCACCAGTATCACCACCATCATCTCCCTATTCAACATTCGCAACCGCTGAAGGGATCTGGTAGTGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTTCATTCCTGCTTCTCTTCTGTCGGCGAGATTTCGTCTATGAAAGTCATTCGTAATAAGCAAACTGGTTGTCTGAAGGCTGAGAAGTTCTTCAAAACTATCTGGAATGTTCATGCCAAGTACAGAGCAGACTTCCGCCTGAATTGGGCGACATTTAGTACTGGTGACAAGCGATCAGATAATGATCCTGATCTTTTTCTATTTTGTTGGAGACTTAGCTGCAGATGTTACCGATTCTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCTGTTAAAGCAGCAAAAGTTCGACCCATGCGCATTGGTGCTGCGACACCCAGAAAGTCTTCTGGATATCAGCAGCAGCATTCTTCACAAGGAGGAGGATATTCGACAAATGGTTACTTTAGCCAAGGTCTCCAATCTGAAGGAGATTCTGCAAATACAACTATATTTGTTGGAGGACTTGATCCTAATGTCACCGATGAAGATCTGAGGCAACCTTTCTCGCAGCACGGTGAGATTGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGATTTGTCCAATTTGCCAACAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGGAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGTTCAGAGAGTTTGGTAACCAATGGAATGGAGCTTACTACGGAGGGCACATATATGATGGATATGGATATGGGTTGGCATCTCCTCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTATACTGTCTACGGAAACCATCAGCAACAAGTAGAACAGATGAAGTTACTTTAG

Coding sequence (CDS)

ATGCAAAGCAACGGTTCTGATTCGCAGCCACAGGAACCAAATCAACGGCATCAACAACAGCCGCAGCCATGGATACCGCCAATGCAGTACCCGCCGCCGCCCATGGTAATGCCGCATCATATGATGACGCCGCAACATTATATGGCGCCGCCGTTACCGCCGCCGTATATGCATTATCATCACCAGTATCACCACCATCATCTCCCTATTCAACATTCGCAACCGCTGAAGGGATCTGGTAGTGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTTCATTCCTGCTTCTCTTCTGTCGGCGAGATTTCGTCTATGAAAGTCATTCGTAATAAGCAAACTGGTTGTCTGAAGGCTGAGAAGTTCTTCAAAACTATCTGGAATGTTCATGCCAAGTACAGAGCAGACTTCCGCCTGAATTGGGCGACATTTAGTACTGGTGACAAGCGATCAGATAATGATCCTGATCTTTTTCTATTTTGTTGGAGACTTAGCTGCAGATGTTACCGATTCTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCTGTTAAAGCAGCAAAAGTTCGACCCATGCGCATTGGTGCTGCGACACCCAGAAAGTCTTCTGGATATCAGCAGCAGCATTCTTCACAAGGAGGAGGATATTCGACAAATGGTTACTTTAGCCAAGGTCTCCAATCTGAAGGAGATTCTGCAAATACAACTATATTTGTTGGAGGACTTGATCCTAATGTCACCGATGAAGATCTGAGGCAACCTTTCTCGCAGCACGGTGAGATTGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGATTTGTCCAATTTGCCAACAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGGAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGTTCAGAGAGTTTGGTAACCAATGGAATGGAGCTTACTACGGAGGGCACATATATGATGGATATGGATATGGGTTGGCATCTCCTCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTATACTGTCTACGGAAACCATCAGCAACAAGTAGAACAGATGAAGTTACTTTAG

Protein sequence

MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYHHQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTGCLKAEKFFKTIWNVHAKYRADFRLNWATFSTGDKRSDNDPDLFLFCWRLSCRCYRFLLYETFSSKFPSVKAAKVRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLSWGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQVEQMKLL

Homology

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BLAST of IVF0001502 vs. ExPASy Swiss-Prot
Match: Q9SX79 (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 5.6e-89
Identity = 218/421 (51.78%), Postives = 256/421 (60.81%), Query Frame = 0


Query: 10  PQEPNQRHQQQPQ--PWIPP--MQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHY--HHQY 69
           PQ+P +  + QP+  P  PP  M+Y PP +++PH MM      APP  PPY  Y  HH  
Sbjct: 30  PQQPAKEEENQPKTSPTPPPHWMRY-PPTVIIPHQMM-----YAPPPFPPYHQYPNHHHL 89

Query: 70  HHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSS--VGEISSMKVIRNKQT 129
           HH     +H     G   ENKTIWVGDLHHWMDE+YL+S F+S    EI S+KVIRNK  
Sbjct: 90  HHQSRGNKHQNAFNG---ENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNN 149

Query: 130 GCLKAEKFFK-----------TIWNVHAKYRAD--FRLNWATFSTGDKRSDND-PDLFLF 189
           G  +   F +             +N       D  FRLNWA+FSTG+KR +N+ PDL +F
Sbjct: 150 GLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIF 209

Query: 190 CWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------- 249
              LS      LL+ETFS K+PSVKAAKV                               
Sbjct: 210 VGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMN 269

Query: 250 ------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 309
                 R MRIG ATPRK++GYQQQ     GGY  NG  +   + EGD  NTTIFVGGLD
Sbjct: 270 GVKCSSRAMRIGPATPRKTNGYQQQ-----GGYMPNGTLT---RPEGDIMNTTIFVGGLD 329

Query: 310 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 369
            +VTDEDL+QPF++ GEIVSVKIPVGKGCGFVQF NR +AEEAL+KLNGTVIGKQTVRLS
Sbjct: 330 SSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLS 389

Query: 370 WGRNPANKQFRE-FGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQ 371
           WGRNPANKQ R+ +GNQW   YYGG  Y+GYGY +  P DP MY AA   Y +YG HQQQ
Sbjct: 390 WGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP-DPRMYPAA-PYYPMYGGHQQQ 431

[Close]

BLAST of IVF0001502 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 9.8e-86
Identity = 203/438 (46.35%), Postives = 254/438 (57.99%), Query Frame = 0


Query: 4   NGSD--SQPQEPNQRHQQQPQPWIP---------PMQYPPPPMVMPHHMMTPQHYMAPPL 63
           NG D   Q Q+  Q+HQQQ Q W+           MQYP   M M   MM  Q YM    
Sbjct: 2   NGGDMNQQQQQQQQQHQQQQQQWLAMQQYQQQWMAMQYPAAAMAMQQQMMYGQQYM---- 61

Query: 64  PPPYMHYHHQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISS 123
            P Y  +  Q      P Q    ++ S  +NKTIW+GDL  WMDESYLHSCFS  GE+ S
Sbjct: 62  -PYYQQHQQQQKMQQSPTQ----IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVIS 121

Query: 124 MKVIRNKQTGCLKAEKFFKTIWNVHA---------------KYRADFRLNWATFSTGDKR 183
           +K+IRNKQTG  ++E++    +N HA                    FRLNWA FSTG+KR
Sbjct: 122 VKIIRNKQTG--QSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKR 181

Query: 184 SDNDPDLFLFCWRLSCRCYRFLLYETFSSKFPSVKAAKV--------------------- 243
           ++   D  +F   L+      +L +TF+S++PS+K AKV                     
Sbjct: 182 AETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDES 241

Query: 244 ----------------RPMRIGAATPRKSSGYQQQHSSQ----GGGYSTNGYFSQGLQSE 303
                           R MRIG ATP+K S + +Q+SSQ     GGY++NG  + G QS+
Sbjct: 242 ERSRAMTEMNGVYCSSRAMRIGVATPKKPSAH-EQYSSQAVILSGGYASNGAATHGSQSD 301

Query: 304 GDSANTTIFVGGLDPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQK 363
           GDS+NTTIFVGGLD  VTDE+LRQ F+Q GE+VSVKIP GKGCGFVQF++R+ A+EA+QK
Sbjct: 302 GDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQK 361

Query: 364 LNGTVIGKQTVRLSWGRNPANKQFR-EFGNQWNGAYYGGHIYDGYGYGLASPHDPSMY-- 371
           L+G +IGKQ VRLSWGR+PANKQ R + G+QWNG Y G   Y GYGYG +   D  MY  
Sbjct: 362 LSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYAT 421

[Close]

BLAST of IVF0001502 vs. ExPASy Swiss-Prot
Match: Q9SX80 (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.9e-85
Identity = 218/439 (49.66%), Postives = 258/439 (58.77%), Query Frame = 0


Query: 2   QSNGSDSQPQEPNQRHQQQPQPWIPPMQY----------PPPPMVMPH-HMMTPQHYMAP 61
           +S  SDS P    Q     P P  PP++           PPPP  M +  ++ PQ   AP
Sbjct: 9   ESESSDSHPLVDYQSLPPYPPPH-PPVEVEENQPKTSPTPPPPHWMRYPPVLMPQMMYAP 68

Query: 62  PLPPPYMHYHHQYHHHHLPIQ-----HSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFS 121
           P P P+  YH   +HHH   Q     H     G   ENKTIWVGDL +WMDE+YL+S F+
Sbjct: 69  PPPMPFSPYHQYPNHHHFHHQSRGNKHQNAFNG---ENKTIWVGDLQNWMDEAYLNSAFT 128

Query: 122 SV--GEISSMKVIRNKQTGCLKAEKFFK-----------TIWNVHAKYRAD--FRLNWAT 181
           S    EI S+KVIRNK  G  +   F +             +N       D  FRLNWA+
Sbjct: 129 SAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWAS 188

Query: 182 FSTGDKRSDND-PDLFLFCWRLSCRCYRFLLYETFSSKFPSVKAAKV------------- 241
           FSTG+KR +N+ PDL +F   L+      LL+ETFS K+PSVKAAKV             
Sbjct: 189 FSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYG 248

Query: 242 ------------------------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQG 301
                                   R MRIG ATPRK++GYQQQ     GGY  +G F+  
Sbjct: 249 FVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ-----GGYMPSGAFT-- 308

Query: 302 LQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEE 361
            +SEGD+ NTTIFVGGLD +VTDEDL+QPFS+ GEIVSVKIPVGKGCGFVQF NR +AEE
Sbjct: 309 -RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEE 368

Query: 362 ALQKLNGTVIGKQTVRLSWGRNPANKQFRE-FGNQWNGAYYGGHIYDGYGYGLASPHDPS 371
           AL+KLNGTVIGKQTVRLSWGRNPANKQ R+ +GNQW   YYGG  Y+GYGY +  P DP 
Sbjct: 369 ALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP-DPR 428

[Close]

BLAST of IVF0001502 vs. ExPASy Swiss-Prot
Match: Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.3e-82
Identity = 195/415 (46.99%), Postives = 243/415 (58.55%), Query Frame = 0


Query: 4   NGSDSQPQEPNQRHQQQPQPWIPPMQYPPPP---MVMPHHMMTPQHYMAPPLPPPYMHYH 63
           N     P +  Q+ QQQ Q W+  MQYPP     M+    M+   H   P    PY  +H
Sbjct: 20  NQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHH 79

Query: 64  HQYHHH-----HLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKV 123
            Q H +     H   QH    +GSG + KT+WVGDL HWMDE+YLHSCFS  GE+SS+KV
Sbjct: 80  PQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKV 139

Query: 124 IRNKQTGCLKAEKFFKTIWNVHAK-----YRAD--------FRLNWATFSTGDKRS-DND 183
           IRNK T   +   F + +    A+     Y           FR+NWA+FSTG+KR+ +N 
Sbjct: 140 IRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENG 199

Query: 184 PDLFLFCWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------- 243
           PDL +F   LS      LL+ETFS ++PSVK+AKV                         
Sbjct: 200 PDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSR 259

Query: 244 ------------RPMRIGAATPRKSSGYQQQHSSQ----GGGYSTNGYFSQGLQSEGDSA 303
                       R MR+G ATP+++   QQQHSSQ     GG+ +NG    G QS+G+S 
Sbjct: 260 ALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGEST 319

Query: 304 NTTIFVGGLDPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGT 355
           N TIFVGG+DP+V DEDLRQPFSQ GE+VSVKIPVGKGCGFVQFA+R  AE+A++ LNGT
Sbjct: 320 NATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGT 379

[Close]

BLAST of IVF0001502 vs. ExPASy Swiss-Prot
Match: F4I3B3 (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.2e-70
Identity = 188/419 (44.87%), Postives = 234/419 (55.85%), Query Frame = 0


Query: 6   SDSQPQEPNQRHQQQPQPWIPPM-QYPPPPMVM---------PHHMMTPQHYMAPPLPPP 65
           S   PQ+  Q+  QQ Q W+  M QYP   M M         PH    P +  A    P 
Sbjct: 30  STPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQ 89

Query: 66  YMH--YHHQYHHHHLPIQHSQPLKGSGSEN-KTIWVGDLHHWMDESYLHSCFSSVGEISS 125
           + +  Y  Q   HH   Q  QP  GSG ++ KT+WVGDL HWMDE+YLH+CFS   E+SS
Sbjct: 90  FQYAAYQQQQQQHHQSQQ--QPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSS 149

Query: 126 MKVIRNKQTGCLKAEKFFKTIWNVHAK-------------YRADFRLNWATFSTGDKR-S 185
           +KVIRNKQT   +   F + +    A+                 FRLNWA+FSTG+KR S
Sbjct: 150 VKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRAS 209

Query: 186 DNDPDLFLFCWRLSCRCYRFLLYETFSSKFPSVKAAKV---------------------- 245
           +N PDL +F   L+      +L ETF+ ++PSVK AKV                      
Sbjct: 210 ENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENE 269

Query: 246 ---------------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSAN 305
                          R MR+G ATP++++ Y QQ+ SQ    +  G+   G  S+G+S N
Sbjct: 270 RSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLA-GGHGGNGSMSDGESNN 329

Query: 306 TTIFVGGLDPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTV 360
           +TIFVGGLD +VT+EDL QPFS  GE+VSVKIPVGKGCGFVQFANR  AEEA+  LNGTV
Sbjct: 330 STIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTV 389

[Close]

BLAST of IVF0001502 vs. ExPASy TrEMBL
Match: A0A1S3BUU0 (polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523 PE=4 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 2.2e-189
Identity = 345/426 (80.99%), Postives = 352/426 (82.63%), Query Frame = 0


Query: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60
           MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120
           HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ
Sbjct: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 121 TGCLKAEKFFKTIWNVHAK-------------YRADFRLNWATFSTGDKRSDNDPDLFLF 180
           TG  +   F + + +  A+                 FRLNWATFSTGDKRSDNDPDL +F
Sbjct: 121 TGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 CWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------- 240
              L+      LLYETFSSKFPSVKAAKV                               
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 241 ------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300
                 RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360
           PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS
Sbjct: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360

Query: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 377
           WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV
Sbjct: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 420

[Close]

BLAST of IVF0001502 vs. ExPASy TrEMBL
Match: A0A6J1CHT5 (polyadenylate-binding protein RBP47-like OS=Momordica charantia OX=3673 GN=LOC111011304 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 8.7e-162
Identity = 311/420 (74.05%), Postives = 329/420 (78.33%), Query Frame = 0


Query: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60
           MQSNGSDSQPQEPNQR  QQPQ W+ PMQYPP  MVMP HMMTPQ YM PPLPP YMHYH
Sbjct: 1   MQSNGSDSQPQEPNQR-LQQPQQWM-PMQYPPAAMVMPPHMMTPQPYMPPPLPPQYMHYH 60

Query: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120
           HQY HHHLPIQHSQPL+GSG ENKTIWVGDLHHWMDESYLH+CF+S+GEISS+KVIRNKQ
Sbjct: 61  HQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEISSIKVIRNKQ 120

Query: 121 TGCLKAEKFF---------KTIWNVHAKYRAD----FRLNWATFSTGDKRSDNDPDLFLF 180
           TG  +   F          K + N    +  +    FRLNWATFSTGDKRSDNDPDL +F
Sbjct: 121 TGLSEGYGFVEFFAHATAEKALQNYSGMFMPNTEQAFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 CWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------- 240
              L+      LLYETFSSKFPSVKAAKV                               
Sbjct: 181 VGDLAADVTDTLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 241 ------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300
                 RPMRIGAATPRKSSGYQQQ+SSQ GGYS+NG FSQGLQSEGDSANTTIFVGGLD
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQYSSQ-GGYSSNGSFSQGLQSEGDSANTTIFVGGLD 300

Query: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360
           PNVTDEDLRQPFSQ+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS
Sbjct: 301 PNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360

Query: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 371
           WGRNPANKQFR+FGNQWNGAYYGGH+YDGYGYGL  PHDPSMYHAAYGAY VYG+HQQQV
Sbjct: 361 WGRNPANKQFRDFGNQWNGAYYGGHMYDGYGYGL-PPHDPSMYHAAYGAYPVYGSHQQQV 416

[Close]

BLAST of IVF0001502 vs. ExPASy TrEMBL
Match: A0A6J1FCI8 (polyadenylate-binding protein RBP47C-like OS=Cucurbita moschata OX=3662 GN=LOC111442850 PE=4 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 1.5e-161
Identity = 309/421 (73.40%), Postives = 330/421 (78.38%), Query Frame = 0


Query: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPL-PPPYMHY 60
           MQSNGSDSQPQEPNQRH QQPQ W+  MQYPPP MVMPHHMMTP HYMAPPL PPPYMHY
Sbjct: 1   MQSNGSDSQPQEPNQRH-QQPQSWM-SMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHY 60

Query: 61  HHQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNK 120
           H QY HHHLPIQHSQPL+GSG ENKTIWVGDLHHWMDESYLH+CF+S+GEI+S+K+IRNK
Sbjct: 61  HPQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEIASIKIIRNK 120

Query: 121 QTGCLKAEKFFKTIWNVHAK-------------YRADFRLNWATFSTGDKRSDNDPDLFL 180
           Q+G  +   F +   +  A+                 FRLNWATFSTGDKRSDNDPDL +
Sbjct: 121 QSGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSI 180

Query: 181 FCWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------ 240
           F   L+      LLY+TFSSKFPSVKAAKV                              
Sbjct: 181 FVGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEM 240

Query: 241 -------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGL 300
                  RPMRIGAATPRKSSGYQQQ+SSQ GGYSTNG FSQGLQSEGDSANTTIFVGGL
Sbjct: 241 NGVYCSSRPMRIGAATPRKSSGYQQQNSSQ-GGYSTNGPFSQGLQSEGDSANTTIFVGGL 300

Query: 301 DPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRL 360
           DPNVTDEDLRQPFSQ+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN TVIGKQT+RL
Sbjct: 301 DPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRL 360

Query: 361 SWGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQ 371
           SWGRNPANKQFR+FGNQWNGAYYGGHIYDGYGYGL  PHDPSMY AAYGAYTVYG+HQQQ
Sbjct: 361 SWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGL-PPHDPSMYQAAYGAYTVYGSHQQQ 417

[Close]

BLAST of IVF0001502 vs. ExPASy TrEMBL
Match: A0A6J1ILR0 (polyadenylate-binding protein RBP47C-like OS=Cucurbita maxima OX=3661 GN=LOC111476746 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.5e-158
Identity = 305/421 (72.45%), Postives = 325/421 (77.20%), Query Frame = 0


Query: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPL-PPPYMHY 60
           MQSNGSDSQPQEPNQRH QQPQ W+  MQYPPP MVMPHHMMTP HYMAPPL PPPYMHY
Sbjct: 1   MQSNGSDSQPQEPNQRH-QQPQSWM-SMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHY 60

Query: 61  HHQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNK 120
           H QY HHHLPIQHSQPL+GSG ENKTIWVGDLHHWMDESYLH+CF+S+GEIS +K+IRNK
Sbjct: 61  HPQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISLIKIIRNK 120

Query: 121 QTGCLKAEKFFKTIWNVHAK-------------YRADFRLNWATFSTGDKRSDNDPDLFL 180
           Q+G  +   F +   +  A+                 FRLNWATFSTGDKRSDNDPDL +
Sbjct: 121 QSGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSI 180

Query: 181 FCWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------ 240
           F   L+      LLY+TFSSKFPSVKAAKV                              
Sbjct: 181 FVGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEM 240

Query: 241 -------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGL 300
                  RPMRIGAATPRKSSGYQQQ+ SQ G Y TNG  SQGLQSEGDSANTTIFVGGL
Sbjct: 241 NGVYCSSRPMRIGAATPRKSSGYQQQNFSQ-GEYLTNGPLSQGLQSEGDSANTTIFVGGL 300

Query: 301 DPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRL 360
           DPNVTDEDLRQPFSQ+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN TVIGKQT+RL
Sbjct: 301 DPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRL 360

Query: 361 SWGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQ 371
           SWGRNPANKQFR+FGNQWNG YYGGHIYDGYGYGL  PHDPSMYHAAYGAYTVYG+HQQQ
Sbjct: 361 SWGRNPANKQFRDFGNQWNGPYYGGHIYDGYGYGL-PPHDPSMYHAAYGAYTVYGSHQQQ 417

[Close]

BLAST of IVF0001502 vs. ExPASy TrEMBL
Match: A0A6J1IW65 (polyadenylate-binding protein RBP47C-like OS=Cucurbita maxima OX=3661 GN=LOC111481137 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 7.9e-155
Identity = 297/420 (70.71%), Postives = 317/420 (75.48%), Query Frame = 0


Query: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60
           MQ+NGSDSQP E NQRHQQ PQ    P+QY PP MVMPHHMMTPQHY+APPLPPPYMHYH
Sbjct: 1   MQNNGSDSQPPETNQRHQQPPQKSWMPLQYRPPAMVMPHHMMTPQHYIAPPLPPPYMHYH 60

Query: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120
           + Y  HHLP+QHSQPL+GSG ENKTIWVGDL HWMDE+YLH+CF S GEISS+K+IRNKQ
Sbjct: 61  YHYQPHHLPMQHSQPLQGSGGENKTIWVGDLQHWMDETYLHNCFGSFGEISSIKIIRNKQ 120

Query: 121 TGCLKAEKFF---------KTIWNVHAKYRAD----FRLNWATFSTGDKRSDNDPDLFLF 180
           TG  +   F          K + N       D    FRLNWATFSTGDKRSDNDPDL +F
Sbjct: 121 TGLSEGYGFVEFFAHATAEKALQNYSGMCMPDTEQAFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 CWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------- 240
              L+      LLY+TFSSKFPSVKAAKV                               
Sbjct: 181 VGDLAADVTDTLLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 241 ------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300
                 RPMRIGAATPRKSSGYQQQ +S  G YSTNG FSQG QSEGDSANTTIFVGGLD
Sbjct: 241 GVHCSSRPMRIGAATPRKSSGYQQQRASL-GAYSTNGAFSQGFQSEGDSANTTIFVGGLD 300

Query: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360
           PNV DEDLRQPFSQ+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTV+GKQTVRLS
Sbjct: 301 PNVNDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVVGKQTVRLS 360

Query: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 371
           WGRNPANKQFR+FGNQWNGAYYGGHIYDGYGYGL  P DPSMYHAAYGAY  YG+HQQQV
Sbjct: 361 WGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGL-PPQDPSMYHAAYGAYPFYGSHQQQV 418

[Close]

BLAST of IVF0001502 vs. NCBI nr
Match: XP_008452518.1 (PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo])

HSP 1 Score: 670 bits (1729), Expect = 9.18e-241
Identity = 346/426 (81.22%), Postives = 351/426 (82.39%), Query Frame = 0


Query: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60
           MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120
           HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ
Sbjct: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 121 TGCLKAEKFF---------KTIWNVHAKYRAD----FRLNWATFSTGDKRSDNDPDLFLF 180
           TG  +   F          K + N    +       FRLNWATFSTGDKRSDNDPDL +F
Sbjct: 121 TGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 CWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------- 240
              L+      LLYETFSSKFPSVKAAKV                               
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 241 ------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300
                 RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360
           PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS
Sbjct: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360

Query: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 376
           WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV
Sbjct: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 420

[Close]

BLAST of IVF0001502 vs. NCBI nr
Match: XP_004141245.1 (polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8649857.1 hypothetical protein Csa_012060 [Cucumis sativus])

HSP 1 Score: 660 bits (1702), Expect = 1.19e-236
Identity = 341/426 (80.05%), Postives = 349/426 (81.92%), Query Frame = 0


Query: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60
           MQ+NGSDSQPQEPNQRHQQQP PWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH
Sbjct: 1   MQNNGSDSQPQEPNQRHQQQPHPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120
           HQYHHHHLPIQ SQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ
Sbjct: 61  HQYHHHHLPIQPSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 121 TGCLKAEKFF---------KTIWNVHAKYRAD----FRLNWATFSTGDKRSDNDPDLFLF 180
           TG  +   F          K + N    +       FRLNWATFSTGDKRSDNDPDL +F
Sbjct: 121 TGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 CWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------- 240
              L+      LLYETFSSKFPSVKAAKV                               
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 241 ------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300
                 RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360
           PNVTDEDLRQPFSQ+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS
Sbjct: 301 PNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360

Query: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 376
           WGRNPANKQFR+FGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV
Sbjct: 361 WGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 420

[Close]

BLAST of IVF0001502 vs. NCBI nr
Match: XP_023535397.1 (polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 580 bits (1495), Expect = 2.87e-205
Identity = 310/421 (73.63%), Postives = 330/421 (78.38%), Query Frame = 0


Query: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPP-YMHY 60
           MQSNGSDSQPQEPNQRHQQ PQ W+  MQYPPP MVMPHHMMTP HYMAPPLPPP YMHY
Sbjct: 1   MQSNGSDSQPQEPNQRHQQ-PQSWMS-MQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHY 60

Query: 61  HHQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNK 120
           H QY HHHLPIQHSQPL+GSG ENKTIWVGDLHHWMDESYLH+CF+S+GEISS+K+IRNK
Sbjct: 61  HPQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISSIKIIRNK 120

Query: 121 QTGCLKAEKFFKTIWNVHAKYRAD-------------FRLNWATFSTGDKRSDNDPDLFL 180
           Q+G  +   F +   +  A+                 FRLNWATFSTGDKRSDNDPDL +
Sbjct: 121 QSGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSI 180

Query: 181 FCWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------ 240
           F   L+      LLY+TFSSKFPSVKAAKV                              
Sbjct: 181 FVGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEM 240

Query: 241 -------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGL 300
                  RPMRIGAATPRKSSGYQQQ+SSQGG YSTNG  SQGLQSEGDSANTTIFVGGL
Sbjct: 241 NGVYCSSRPMRIGAATPRKSSGYQQQNSSQGG-YSTNGPLSQGLQSEGDSANTTIFVGGL 300

Query: 301 DPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRL 360
           DPNVTDEDLRQPFSQ+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN TVIGKQT+RL
Sbjct: 301 DPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRL 360

Query: 361 SWGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQ 370
           SWGRNPANKQFR+FGNQWNGAYYGGHIYDGYGYGL  PHDPSMYHAAYGAYTVYG+HQQQ
Sbjct: 361 SWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLP-PHDPSMYHAAYGAYTVYGSHQQQ 417

[Close]

BLAST of IVF0001502 vs. NCBI nr
Match: XP_022140707.1 (polyadenylate-binding protein RBP47-like [Momordica charantia])

HSP 1 Score: 579 bits (1492), Expect = 7.91e-205
Identity = 311/420 (74.05%), Postives = 329/420 (78.33%), Query Frame = 0


Query: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60
           MQSNGSDSQPQEPNQR QQ PQ W+P MQYPP  MVMP HMMTPQ YM PPLPP YMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRLQQ-PQQWMP-MQYPPAAMVMPPHMMTPQPYMPPPLPPQYMHYH 60

Query: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120
           HQY HHHLPIQHSQPL+GSG ENKTIWVGDLHHWMDESYLH+CF+S+GEISS+KVIRNKQ
Sbjct: 61  HQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEISSIKVIRNKQ 120

Query: 121 TGCLKAEKFF---------KTIWNVHAKYRAD----FRLNWATFSTGDKRSDNDPDLFLF 180
           TG  +   F          K + N    +  +    FRLNWATFSTGDKRSDNDPDL +F
Sbjct: 121 TGLSEGYGFVEFFAHATAEKALQNYSGMFMPNTEQAFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 CWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------- 240
              L+      LLYETFSSKFPSVKAAKV                               
Sbjct: 181 VGDLAADVTDTLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 241 ------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300
                 RPMRIGAATPRKSSGYQQQ+SSQGG YS+NG FSQGLQSEGDSANTTIFVGGLD
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-YSSNGSFSQGLQSEGDSANTTIFVGGLD 300

Query: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360
           PNVTDEDLRQPFSQ+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS
Sbjct: 301 PNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360

Query: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 370
           WGRNPANKQFR+FGNQWNGAYYGGH+YDGYGYGL  PHDPSMYHAAYGAY VYG+HQQQV
Sbjct: 361 WGRNPANKQFRDFGNQWNGAYYGGHMYDGYGYGLP-PHDPSMYHAAYGAYPVYGSHQQQV 416

[Close]

BLAST of IVF0001502 vs. NCBI nr
Match: XP_022936173.1 (polyadenylate-binding protein RBP47C-like [Cucurbita moschata])

HSP 1 Score: 578 bits (1490), Expect = 1.65e-204
Identity = 309/421 (73.40%), Postives = 330/421 (78.38%), Query Frame = 0


Query: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPP-YMHY 60
           MQSNGSDSQPQEPNQRHQQ PQ W+  MQYPPP MVMPHHMMTP HYMAPPLPPP YMHY
Sbjct: 1   MQSNGSDSQPQEPNQRHQQ-PQSWMS-MQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHY 60

Query: 61  HHQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNK 120
           H QY HHHLPIQHSQPL+GSG ENKTIWVGDLHHWMDESYLH+CF+S+GEI+S+K+IRNK
Sbjct: 61  HPQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEIASIKIIRNK 120

Query: 121 QTGCLKAEKFFKTIWNVHAKYRAD-------------FRLNWATFSTGDKRSDNDPDLFL 180
           Q+G  +   F +   +  A+                 FRLNWATFSTGDKRSDNDPDL +
Sbjct: 121 QSGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSI 180

Query: 181 FCWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------ 240
           F   L+      LLY+TFSSKFPSVKAAKV                              
Sbjct: 181 FVGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEM 240

Query: 241 -------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGL 300
                  RPMRIGAATPRKSSGYQQQ+SSQGG YSTNG FSQGLQSEGDSANTTIFVGGL
Sbjct: 241 NGVYCSSRPMRIGAATPRKSSGYQQQNSSQGG-YSTNGPFSQGLQSEGDSANTTIFVGGL 300

Query: 301 DPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRL 360
           DPNVTDEDLRQPFSQ+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN TVIGKQT+RL
Sbjct: 301 DPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRL 360

Query: 361 SWGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQ 370
           SWGRNPANKQFR+FGNQWNGAYYGGHIYDGYGYGL  PHDPSMY AAYGAYTVYG+HQQQ
Sbjct: 361 SWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLP-PHDPSMYQAAYGAYTVYGSHQQQ 417

[Close]

BLAST of IVF0001502 vs. TAIR 10
Match: AT1G47490.1 (RNA-binding protein 47C )

HSP 1 Score: 329.3 bits (843), Expect = 4.0e-90
Identity = 218/421 (51.78%), Postives = 256/421 (60.81%), Query Frame = 0


Query: 10  PQEPNQRHQQQPQ--PWIPP--MQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHY--HHQY 69
           PQ+P +  + QP+  P  PP  M+Y PP +++PH MM      APP  PPY  Y  HH  
Sbjct: 30  PQQPAKEEENQPKTSPTPPPHWMRY-PPTVIIPHQMM-----YAPPPFPPYHQYPNHHHL 89

Query: 70  HHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSS--VGEISSMKVIRNKQT 129
           HH     +H     G   ENKTIWVGDLHHWMDE+YL+S F+S    EI S+KVIRNK  
Sbjct: 90  HHQSRGNKHQNAFNG---ENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNN 149

Query: 130 GCLKAEKFFK-----------TIWNVHAKYRAD--FRLNWATFSTGDKRSDND-PDLFLF 189
           G  +   F +             +N       D  FRLNWA+FSTG+KR +N+ PDL +F
Sbjct: 150 GLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIF 209

Query: 190 CWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------------- 249
              LS      LL+ETFS K+PSVKAAKV                               
Sbjct: 210 VGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMN 269

Query: 250 ------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 309
                 R MRIG ATPRK++GYQQQ     GGY  NG  +   + EGD  NTTIFVGGLD
Sbjct: 270 GVKCSSRAMRIGPATPRKTNGYQQQ-----GGYMPNGTLT---RPEGDIMNTTIFVGGLD 329

Query: 310 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 369
            +VTDEDL+QPF++ GEIVSVKIPVGKGCGFVQF NR +AEEAL+KLNGTVIGKQTVRLS
Sbjct: 330 SSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLS 389

Query: 370 WGRNPANKQFRE-FGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQ 371
           WGRNPANKQ R+ +GNQW   YYGG  Y+GYGY +  P DP MY AA   Y +YG HQQQ
Sbjct: 390 WGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP-DPRMYPAA-PYYPMYGGHQQQ 431

[Close]

BLAST of IVF0001502 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 317.0 bits (811), Expect = 2.0e-86
Identity = 218/439 (49.66%), Postives = 258/439 (58.77%), Query Frame = 0


Query: 2   QSNGSDSQPQEPNQRHQQQPQPWIPPMQY----------PPPPMVMPH-HMMTPQHYMAP 61
           +S  SDS P    Q     P P  PP++           PPPP  M +  ++ PQ   AP
Sbjct: 9   ESESSDSHPLVDYQSLPPYPPPH-PPVEVEENQPKTSPTPPPPHWMRYPPVLMPQMMYAP 68

Query: 62  PLPPPYMHYHHQYHHHHLPIQ-----HSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFS 121
           P P P+  YH   +HHH   Q     H     G   ENKTIWVGDL +WMDE+YL+S F+
Sbjct: 69  PPPMPFSPYHQYPNHHHFHHQSRGNKHQNAFNG---ENKTIWVGDLQNWMDEAYLNSAFT 128

Query: 122 SV--GEISSMKVIRNKQTGCLKAEKFFK-----------TIWNVHAKYRAD--FRLNWAT 181
           S    EI S+KVIRNK  G  +   F +             +N       D  FRLNWA+
Sbjct: 129 SAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWAS 188

Query: 182 FSTGDKRSDND-PDLFLFCWRLSCRCYRFLLYETFSSKFPSVKAAKV------------- 241
           FSTG+KR +N+ PDL +F   L+      LL+ETFS K+PSVKAAKV             
Sbjct: 189 FSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYG 248

Query: 242 ------------------------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQG 301
                                   R MRIG ATPRK++GYQQQ     GGY  +G F+  
Sbjct: 249 FVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ-----GGYMPSGAFT-- 308

Query: 302 LQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEE 361
            +SEGD+ NTTIFVGGLD +VTDEDL+QPFS+ GEIVSVKIPVGKGCGFVQF NR +AEE
Sbjct: 309 -RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEE 368

Query: 362 ALQKLNGTVIGKQTVRLSWGRNPANKQFRE-FGNQWNGAYYGGHIYDGYGYGLASPHDPS 371
           AL+KLNGTVIGKQTVRLSWGRNPANKQ R+ +GNQW   YYGG  Y+GYGY +  P DP 
Sbjct: 369 ALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP-DPR 428

[Close]

BLAST of IVF0001502 vs. TAIR 10
Match: AT3G19130.1 (RNA-binding protein 47B )

HSP 1 Score: 307.4 bits (786), Expect = 1.6e-83
Identity = 195/415 (46.99%), Postives = 243/415 (58.55%), Query Frame = 0


Query: 4   NGSDSQPQEPNQRHQQQPQPWIPPMQYPPPP---MVMPHHMMTPQHYMAPPLPPPYMHYH 63
           N     P +  Q+ QQQ Q W+  MQYPP     M+    M+   H   P    PY  +H
Sbjct: 20  NQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHH 79

Query: 64  HQYHHH-----HLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKV 123
            Q H +     H   QH    +GSG + KT+WVGDL HWMDE+YLHSCFS  GE+SS+KV
Sbjct: 80  PQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKV 139

Query: 124 IRNKQTGCLKAEKFFKTIWNVHAK-----YRAD--------FRLNWATFSTGDKRS-DND 183
           IRNK T   +   F + +    A+     Y           FR+NWA+FSTG+KR+ +N 
Sbjct: 140 IRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENG 199

Query: 184 PDLFLFCWRLSCRCYRFLLYETFSSKFPSVKAAKV------------------------- 243
           PDL +F   LS      LL+ETFS ++PSVK+AKV                         
Sbjct: 200 PDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSR 259

Query: 244 ------------RPMRIGAATPRKSSGYQQQHSSQ----GGGYSTNGYFSQGLQSEGDSA 303
                       R MR+G ATP+++   QQQHSSQ     GG+ +NG    G QS+G+S 
Sbjct: 260 ALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGEST 319

Query: 304 NTTIFVGGLDPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGT 355
           N TIFVGG+DP+V DEDLRQPFSQ GE+VSVKIPVGKGCGFVQFA+R  AE+A++ LNGT
Sbjct: 320 NATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGT 379

[Close]

BLAST of IVF0001502 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 268.5 bits (685), Expect = 8.3e-72
Identity = 188/419 (44.87%), Postives = 234/419 (55.85%), Query Frame = 0


Query: 6   SDSQPQEPNQRHQQQPQPWIPPM-QYPPPPMVM---------PHHMMTPQHYMAPPLPPP 65
           S   PQ+  Q+  QQ Q W+  M QYP   M M         PH    P +  A    P 
Sbjct: 30  STPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQ 89

Query: 66  YMH--YHHQYHHHHLPIQHSQPLKGSGSEN-KTIWVGDLHHWMDESYLHSCFSSVGEISS 125
           + +  Y  Q   HH   Q  QP  GSG ++ KT+WVGDL HWMDE+YLH+CFS   E+SS
Sbjct: 90  FQYAAYQQQQQQHHQSQQ--QPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSS 149

Query: 126 MKVIRNKQTGCLKAEKFFKTIWNVHAK-------------YRADFRLNWATFSTGDKR-S 185
           +KVIRNKQT   +   F + +    A+                 FRLNWA+FSTG+KR S
Sbjct: 150 VKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRAS 209

Query: 186 DNDPDLFLFCWRLSCRCYRFLLYETFSSKFPSVKAAKV---------------------- 245
           +N PDL +F   L+      +L ETF+ ++PSVK AKV                      
Sbjct: 210 ENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENE 269

Query: 246 ---------------RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSAN 305
                          R MR+G ATP++++ Y QQ+ SQ    +  G+   G  S+G+S N
Sbjct: 270 RSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLA-GGHGGNGSMSDGESNN 329

Query: 306 TTIFVGGLDPNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTV 360
           +TIFVGGLD +VT+EDL QPFS  GE+VSVKIPVGKGCGFVQFANR  AEEA+  LNGTV
Sbjct: 330 STIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTV 389

[Close]

BLAST of IVF0001502 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 221.1 bits (562), Expect = 1.5e-57
Identity = 155/403 (38.46%), Postives = 206/403 (51.12%), Query Frame = 0


Query: 28  MQYPPPPMVMPHHMMTP---QHY-------MAPPLPPPYMHYHHQYHHHHLPIQHSQPLK 87
           MQ PPP  ++PHH   P   Q Y       +A   PPP   ++ Q           QP  
Sbjct: 2   MQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQ----AAAPPSVQPT- 61

Query: 88  GSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTGCLK------------ 147
            +  E +T+W+GDL +WMDE++L+ CF+  GE+ S KVIRNKQTG ++            
Sbjct: 62  -TADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAA 121

Query: 148 AEKFFKTIWNVHAKYRAD--FRLNWATFSTGDKRSDNDPDLFLFCWRLSCRCYRFLLYET 207
           AE+  +T  N       D  FRLNWA+ S+GDKR D+ PD  +F   L+     ++L ET
Sbjct: 122 AERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLET 181

Query: 208 FSSKFPSVKAAKV-------------------------------------RPMRIGAATP 267
           F + +PSVK AKV                                     RPMRIG A  
Sbjct: 182 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAAS 241

Query: 268 RKS-SGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQH 327
           +K  +G +  + S   G +T          + D  NTT+FVGGLD +VTD+ L+  FSQ+
Sbjct: 242 KKGVTGQRDSYQSSAAGVTT----------DNDPNNTTVFVGGLDASVTDDHLKNVFSQY 301

Query: 328 GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLSWGRNPANKQFREFGN 369
           GEIV VKIP GK CGFVQF+ ++ AEEAL+ LNG  +G  TVRLSWGR+P+NKQ      
Sbjct: 302 GEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ----SG 361

The following BLAST results are available for this feature:

BLAST of IVF0001502 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX79	5.6e-89	51.78	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]
Q9LEB3	9.8e-86	46.35	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9SX80	2.9e-85	49.66	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
Q0WW84	2.3e-82	46.99	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
F4I3B3	1.2e-70	44.87	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]

BLAST of IVF0001502 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUU0	2.2e-189	80.99	polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523...	[more]
A0A6J1CHT5	8.7e-162	74.05	polyadenylate-binding protein RBP47-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1FCI8	1.5e-161	73.40	polyadenylate-binding protein RBP47C-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1ILR0	1.5e-158	72.45	polyadenylate-binding protein RBP47C-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1IW65	7.9e-155	70.71	polyadenylate-binding protein RBP47C-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of IVF0001502 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452518.1	9.18e-241	81.22	PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo]	[more]
XP_004141245.1	1.19e-236	80.05	polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8649857.1 hypothetical...	[more]
XP_023535397.1	2.87e-205	73.63	polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo]	[more]
XP_022140707.1	7.91e-205	74.05	polyadenylate-binding protein RBP47-like [Momordica charantia]	[more]
XP_022936173.1	1.65e-204	73.40	polyadenylate-binding protein RBP47C-like [Cucurbita moschata]	[more]

BLAST of IVF0001502 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47490.1	4.0e-90	51.78	RNA-binding protein 47C	[more]
AT1G47500.1	2.0e-86	49.66	RNA-binding protein 47C'	[more]
AT3G19130.1	1.6e-83	46.99	RNA-binding protein 47B	[more]
AT1G49600.1	8.3e-72	44.87	RNA-binding protein 47A	[more]
AT1G11650.2	1.5e-57	38.46	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 243..310 e-value: 5.7E-23 score: 92.3 coord: 85..141 e-value: 1.7 score: 4.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 244..307 e-value: 1.1E-19 score: 70.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 242..314 score: 18.580891
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 229..345 e-value: 6.3E-27 score: 96.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..224 e-value: 9.0E-9 score: 37.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR47640:SF16	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 197..370
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 197..370
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 17..196
None	No IPR available	PANTHER	PTHR47640:SF16	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 17..196
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 241..312 e-value: 2.4669E-41 score: 137.82
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 231..334
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 55..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001502.2	IVF0001502.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding