IVF0001478 (gene) Melon (IVF77) v1

Overview


Name	IVF0001478
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr12: 21239723 .. 21242502 (-)
RNA-Seq Expression	IVF0001478
Synteny	IVF0001478

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAAGAGCTCACTGTCCTTCGATACTTGGGCGGCGCCTAGTTTCTCCATTTTTTTTTGTCCTCTCTTTTGGCTGTCCAAATGAAGCTCTTACAATCTGTAAAACCAACGAACTTGATTGCATTAAGGAGAGGATTGGTGAATTTCTACTCTACGTTTGTGAAGGATAACCTTTACAGAAGGATTTCACCGGTGGGTGACCCTAATATCTCTGTAATTCCAGTTCTTGATCAGTGGGTATTAGAAGGCAGGGTTGTTCAGAAAGAAGAACTTCAGAAGATCATTAAGGAGCTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGGTTTGATTTCTTATTCATAACTTCGTCAAAGTATGATGGTTTTGATTTGATTTACTCATGTGAAATGTTTTTGTTGATTGAGGTAAATGGGTCCAAACGATTTGGCATTGTTGATTTCTTTAAATGAATAATGTGTTCATCTATTTTCCAGCATGGTTTCTTCTCCTATGAACTTGCTAAACCGCCGGGATTTTGTTTTCTTTGTTGAAATAGACAGTATGTGATAATTGGTGTGGAGTTGCGTTGTCTCATGCATAAATGTATTTCGTAATTAACCAACTTCCATAAGGGATATGGCTATTCAAATGGTGATGAATAGTCTATACATATGCCTTTCTTCCCAAATATTTTTCGCCGGTAAAACATTCTGCCTTTTGTAAATTTTGTCGAGCTTGGTTTATTTTCACAAAGTATCGTCCATTGAATCTTGTGGACAATGCGCTGCCTCTATAAAAAAGTAATTTGTTTTTTCCTTCCACACAATTACTCATGAAACTTATGCATTAGAGTGAGTAACATTGTTTCTTAAGTCAACCAAGTTTTTTATTTCCTCTTTTTTTAATATTATTCATATATCAGCTCTAACCAATGTAGAAGTAATGAATGAAATTAGTTCGTCAGGAAACAACTCTAGACTCTTGAGGGAGATGATTTTATTTTCTATTTCCTCTTAGATTACATGTGATTCTTCATTTGATCTCAAATTCACGTCTGATAACTCTCTTTTGTCATTGATAGTTTGTCTTGCTGTTCTGCCATTGCTTTGTTTGTGCTGCAGAGTTCACTTTCATGGAACTAGCTTGCTTTTCCTCTCAAATCTTTCTCTATGTAATTTGTTAGCTCTGCTGAAATGCTATAACTTGCAAGAATAACGAGTACATCAGAGAGTGATTTGCTTTCCATGTTGTTCTTTCTGACCTATCAAAGAAGCTACATTGTGGAGAGTTCTTGGCTTATTGGTTTCATATTAAATTGAATTATTCCTTATGTTTTAACCAGTATTATTGTTTTGACCCATCTCTTGAAACCCTCTTTCATCTTCAGATATCGAAGTGGATGAGTGATAAAAGATACCTTCCTTTATCGACTGATGATGTCGCTACGCGAATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTAGAAGATTATTTCAATAACATGCCTAGTCAGTTGAAAAGGTATCATGTTCATATAGCTCTTCTTAATTGCTATGCCCATGAAAAGTGTGTGGATAAAGCCAATGCCTTCCTGCAGAAGATCAAGGAAATGGGTTATGCTAAAAGTACTCTCCCATACAATATCATGATGAATCTTTATCATCAAATTGGAGAATTTGAGAGATTAGATTCTCTGTTGAAAGAAATGAAAGAAAAGGGTGTTTATTACGATCGATTCACATATAGCATCCGACTAAGTGCATATGCTGCTGCATCTGATTGTACGGGAATCGAAAAGATGATGGAACAAATGGAATCAAATACGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGCTTACAATAAAGTTGGCTTAATAGACAAATCCGTTTCCATGCTGAAGAAATCAGAAGGTCGCCTAGCAACTGACAAAAAGAAAGGTCATGCATTTAATGTCTACCTTAAACTATATGCCAGAAATGGAAAGAAAGACGAGGTACACCGCATATGGAATCTCTATAAGAAAGAGAAAATCTTCAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTAGACGATATCAGAGGTGCGGAGGATATTTACAAGGAATGGGAGACCCAGAAACTGTCCTACGACGTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATTGAGAAAGCTGAGGAGCTTGTAAATGAGATAGTGAATGTAAGAGGCAAGTTTTCGGTCGAGTCGTGGTGCTATTTAGCAAGTGGATATCTTCAGAAAGATCAACTTCCTCAGGCAGTTGAGACACTGAAGAAAGCAGCCAGTTTGTGTCCATCAGAACTGAACTACGTCAAGGAAATTTTGGCAGCATTTTCGGATGGAAAGCAAGATGTGGAAGAAGCTGAGAAAGTTGTGAATTTGTTGAGGGAAAAAGATAACCTTAATCCTGCTCGTGCTCATGATATATTGGTAGAGCGATGATGACTGAATCTGCCAAATTTAACTTTTGTTCTAAAAGAACAGTGAAGTACTGAAGGGGTGTTTAGTAATTATTTTGTTTCTTAGAAAGAAAAGAAAAAGAAAAGGATAACGAAAAAGAAAAGGATAAAGAAAAAGAATGAAAAGTGCACCTCCATGAATCTACAAATTTGGTATTAAGTATATCGAGTGTCTTTTAAGGCTATCCTTAAAAGTGTATTAATTTTGTATCAATCTTGTATTAAGACTGAATTTTGTATTAATCTTTATCAGCATGATTTAAGACTAGAC

mRNA sequence

CTGAAGAGCTCACTGTCCTTCGATACTTGGGCGGCGCCTAGTTTCTCCATTTTTTTTTGTCCTCTCTTTTGGCTGTCCAAATGAAGCTCTTACAATCTGTAAAACCAACGAACTTGATTGCATTAAGGAGAGGATTGGTGAATTTCTACTCTACGTTTGTGAAGGATAACCTTTACAGAAGGATTTCACCGGTGGGTGACCCTAATATCTCTGTAATTCCAGTTCTTGATCAGTGGGTATTAGAAGGCAGGGTTGTTCAGAAAGAAGAACTTCAGAAGATCATTAAGGAGCTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGATATCGAAGTGGATGAGTGATAAAAGATACCTTCCTTTATCGACTGATGATGTCGCTACGCGAATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTAGAAGATTATTTCAATAACATGCCTAGTCAGTTGAAAAGGTATCATGTTCATATAGCTCTTCTTAATTGCTATGCCCATGAAAAGTGTGTGGATAAAGCCAATGCCTTCCTGCAGAAGATCAAGGAAATGGGTTATGCTAAAAGTACTCTCCCATACAATATCATGATGAATCTTTATCATCAAATTGGAGAATTTGAGAGATTAGATTCTCTGTTGAAAGAAATGAAAGAAAAGGGTGTTTATTACGATCGATTCACATATAGCATCCGACTAAGTGCATATGCTGCTGCATCTGATTGTACGGGAATCGAAAAGATGATGGAACAAATGGAATCAAATACGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGCTTACAATAAAGTTGGCTTAATAGACAAATCCGTTTCCATGCTGAAGAAATCAGAAGGTCGCCTAGCAACTGACAAAAAGAAAGGTCATGCATTTAATGTCTACCTTAAACTATATGCCAGAAATGGAAAGAAAGACGAGGTACACCGCATATGGAATCTCTATAAGAAAGAGAAAATCTTCAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTAGACGATATCAGAGGTGCGGAGGATATTTACAAGGAATGGGAGACCCAGAAACTGTCCTACGACGTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATTGAGAAAGCTGAGGAGCTTGTAAATGAGATAGTGAATGTAAGAGGCAAGTTTTCGGTCGAGTCGTGGTGCTATTTAGCAAGTGGATATCTTCAGAAAGATCAACTTCCTCAGGCAGTTGAGACACTGAAGAAAGCAGCCAGTTTGTGTCCATCAGAACTGAACTACGTCAAGGAAATTTTGGCAGCATTTTCGGATGGAAAGCAAGATGTGGAAGAAGCTGAGAAAGTTGTGAATTTGTTGAGGGAAAAAGATAACCTTAATCCTGCTCGTGCTCATGATATATTGGTAGAGCGATGATGACTGAATCTGCCAAATTTAACTTTTGTTCTAAAAGAACAGTGAAGTACTGAAGGGGTGTTTAGTAATTATTTTGTTTCTTAGAAAGAAAAGAAAAAGAAAAGGATAACGAAAAAGAAAAGGATAAAGAAAAAGAATGAAAAGTGCACCTCCATGAATCTACAAATTTGGTATTAAGTATATCGAGTGTCTTTTAAGGCTATCCTTAAAAGTGTATTAATTTTGTATCAATCTTGTATTAAGACTGAATTTTGTATTAATCTTTATCAGCATGATTTAAGACTAGAC

Coding sequence (CDS)

ATGAAGCTCTTACAATCTGTAAAACCAACGAACTTGATTGCATTAAGGAGAGGATTGGTGAATTTCTACTCTACGTTTGTGAAGGATAACCTTTACAGAAGGATTTCACCGGTGGGTGACCCTAATATCTCTGTAATTCCAGTTCTTGATCAGTGGGTATTAGAAGGCAGGGTTGTTCAGAAAGAAGAACTTCAGAAGATCATTAAGGAGCTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGATATCGAAGTGGATGAGTGATAAAAGATACCTTCCTTTATCGACTGATGATGTCGCTACGCGAATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTAGAAGATTATTTCAATAACATGCCTAGTCAGTTGAAAAGGTATCATGTTCATATAGCTCTTCTTAATTGCTATGCCCATGAAAAGTGTGTGGATAAAGCCAATGCCTTCCTGCAGAAGATCAAGGAAATGGGTTATGCTAAAAGTACTCTCCCATACAATATCATGATGAATCTTTATCATCAAATTGGAGAATTTGAGAGATTAGATTCTCTGTTGAAAGAAATGAAAGAAAAGGGTGTTTATTACGATCGATTCACATATAGCATCCGACTAAGTGCATATGCTGCTGCATCTGATTGTACGGGAATCGAAAAGATGATGGAACAAATGGAATCAAATACGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGCTTACAATAAAGTTGGCTTAATAGACAAATCCGTTTCCATGCTGAAGAAATCAGAAGGTCGCCTAGCAACTGACAAAAAGAAAGGTCATGCATTTAATGTCTACCTTAAACTATATGCCAGAAATGGAAAGAAAGACGAGGTACACCGCATATGGAATCTCTATAAGAAAGAGAAAATCTTCAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTAGACGATATCAGAGGTGCGGAGGATATTTACAAGGAATGGGAGACCCAGAAACTGTCCTACGACGTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATTGAGAAAGCTGAGGAGCTTGTAAATGAGATAGTGAATGTAAGAGGCAAGTTTTCGGTCGAGTCGTGGTGCTATTTAGCAAGTGGATATCTTCAGAAAGATCAACTTCCTCAGGCAGTTGAGACACTGAAGAAAGCAGCCAGTTTGTGTCCATCAGAACTGAACTACGTCAAGGAAATTTTGGCAGCATTTTCGGATGGAAAGCAAGATGTGGAAGAAGCTGAGAAAGTTGTGAATTTGTTGAGGGAAAAAGATAACCTTAATCCTGCTCGTGCTCATGATATATTGGTAGAGCGATGA

Protein sequence

MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQKEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYKKEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAFSDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER

Homology

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BLAST of IVF0001478 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 5.5e-91
Identity = 172/420 (40.95%), Postives = 268/420 (63.81%), Query Frame = 0


Query: 29  DNLYRRISPVGDPNISVIPVLDQWVLEGRVVQKEELQKIIKELRVYKRFKHALEISKWMS 88
           D L RR++  GDP+ S+I VLD W+ +G +V+  EL  IIK LR + RF HAL+IS WMS
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 89  DKRYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCYAHEKCVDK 148
           + R   +S  DVA R++LI +V GL + E +F  +P + + YH++ ALLNCYA +K + K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 149 ANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDRFTYSIRLS 208
           A    Q++KE+G+ K  LPYN+M+NLY + G++  ++ LL+EM+++ V  D FT + RL 
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 209 AYAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLAT 268
           AY+  SD  G+EK + + E++  + LDW  Y   AN Y K GL +K++ ML+KSE  +  
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277

Query: 269 DKKKGHAFNVYLKLYARNGKKDEVHRIWNLYKK-EKIFNKGFISMIRSLLILDDIRGAED 328
            K+K HA+ V +  Y   GKK+EV+R+W+LYK+ +  +N G+IS+I +LL +DDI   E 
Sbjct: 278 QKRK-HAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEK 337

Query: 329 IYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWCYLASGYL 388
           I +EWE     +D+RIP+LL+  YC+ G++EKAEE+VN +V         +W  LA GY 
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 397

Query: 389 QKDQLPQAVETLKKAASLCPSELNYVKEILAA---FSDGKQDVEEAEKVVNLLREKDNLN 445
              ++ +AVE  K+A  +        + +L +   + +G++D+E   K++ LL E+ +++
Sbjct: 398 MAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS 456

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BLAST of IVF0001478 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 6.8e-73
Identity = 170/462 (36.80%), Postives = 261/462 (56.49%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFV-KDNLYRRISPVGDPNISVIPVLDQWVLEGRVV 60
           M +L+ + P NLIA R     +Y+  V K  LY +ISP+GDP  SV P L  WV  G+ V
Sbjct: 1   MNILRRI-PANLIASR----YYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKV 60

Query: 61  QKEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDY 120
              EL +I+ +LR  KRF HALE+SKWM++      S  + A  ++LI RV+G    E+Y
Sbjct: 61  SVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEY 120

Query: 121 FNNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIG 180
           F N+  Q K    + ALLNCY  ++ V+K+    +K+KEMG+  S+L YN +M LY  IG
Sbjct: 121 FENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIG 180

Query: 181 EFERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCY 240
           + E++  +L+EMKE+ V  D ++Y I ++A+ A  D   I   +  ME    I +DWN Y
Sbjct: 181 QHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTY 240

Query: 241 VIAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLY 300
            +AA  Y   G  D++V +LK SE RL  +KK G  +N  + LYAR GKK EV R+W+L 
Sbjct: 241 AVAAKFYIDGGDCDRAVELLKMSENRL--EKKDGEGYNHLITLYARLGKKIEVLRLWDLE 300

Query: 301 KK--EKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLI 360
           K   ++  N+ ++++++SL+ +D +  AE++  EW++    YD R+PN ++  Y    + 
Sbjct: 301 KDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSME 360

Query: 361 EKAEELVNEIVNVRGKFSV-ESWCYLASGYLQKDQLPQAVETLKKAASLCPSE------L 420
           EKAE ++ ++   RGK +  ESW  +A+ Y +K  L  A + +K A  +          L
Sbjct: 361 EKAEAMLEDLAR-RGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGL 420

Query: 421 NYVKEILAAFSDGKQDVEEAEKVVNLLREKDNLNPARAHDIL 453
             V  +L+   D +  ++E E  V  LR    +N    H ++
Sbjct: 421 TLVTSVLSWVGD-EGSLKEVESFVASLRNCIGVNKQMYHALV 453

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BLAST of IVF0001478 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 254.6 bits (649), Expect = 2.1e-66
Identity = 146/421 (34.68%), Postives = 241/421 (57.24%), Query Frame = 0


Query: 31  LYRRISPVGDPNISVIPVLDQWVLEGRVVQKEELQKIIKELRVYKRFKHALEISKWMSDK 90
           +Y++IS +  P +    VL+QW   GR + K EL +++KELR YKR   ALE+  WM+++
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 91  -RYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCYAHEKCVDKA 150
                LS  D A +++LI +V G+   E++F  +P   K   V+ +LLN Y   K  +KA
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 151 NAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDRFTYSIRLSA 210
            A L  +++ GYA   LP+N+MM LY  + E++++D+++ EMK+K +  D ++Y+I LS+
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 211 YAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLATD 270
             +      +E + +QM+S+ SI  +W  +   A  Y K+G  +K+   L+K E R+   
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARIT-- 308

Query: 271 KKKGHAFNVYLKLYARNGKKDEVHRIWNLYKK--EKIFNKGFISMIRSLLILDDIRGAED 330
            +    ++  L LY   G K E++R+W++YK     I N G+ +++ SL+ + DI GAE 
Sbjct: 309 GRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEK 368

Query: 331 IYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWCYLASGYL 390
           +Y+EW   K SYD RIPNLL++AY +   +E AE L + +V + GK S  +W  LA G+ 
Sbjct: 369 VYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHT 428

Query: 391 QKDQLPQAVETLKKAASLCPSELNYVKEILA-----AFSDGKQDVEEAEKVVNLLREKDN 444
           +K  + +A+  L+ A S      N+  ++L         + + DV   E V+ LLR+  +
Sbjct: 429 RKRCISEALTCLRNAFS-AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 486

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BLAST of IVF0001478 vs. ExPASy Swiss-Prot
Match: Q9C7F1 (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2)

HSP 1 Score: 223.0 bits (567), Expect = 6.8e-57
Identity = 128/335 (38.21%), Postives = 197/335 (58.81%), Query Frame = 0


Query: 34  RISPVGDPNISVIPVLDQWVLEGRVVQKEELQKIIKELRVYKRFKHALEISKWMSDKRYL 93
           RI+     N  +IPVL+QW  +G  V    ++ IIK+LR   +   AL++S+WMS ++  
Sbjct: 41  RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100

Query: 94  PLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCYAH-EKCVDKANAF 153
            L  +D A R++LI  V GLE+ E +F ++P   +   V+ +LLN YA  +K + KA A 
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEAT 160

Query: 154 LQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDRFTYSIRLSAYAA 213
            QK++++G     +PYN MM+LY  +   E+++ LL EMK+  V  D  T +  L  Y+A
Sbjct: 161 FQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSA 220

Query: 214 ASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLATDKKK 273
             D T +EK + + E    I L+W+  +  A AY +     K++ ML+ +E +L   K  
Sbjct: 221 VCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTE-QLVDQKSL 280

Query: 274 GHAFNVYLKLYARNGKKDEVHRIWNLYKKE--KIFNKGFISMIRSLLILDDIRGAEDIYK 333
             A++  +KLY   G ++EV R+W LYK +  +  N G+ ++IRSLL +DDI GAE+IYK
Sbjct: 281 KSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYK 340

Query: 334 EWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVN 366
            WE+  L +D RIP +L   Y   G+ EKAE+L+N
Sbjct: 341 VWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMN 374

[Close]

BLAST of IVF0001478 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.2e-55
Identity = 132/429 (30.77%), Postives = 239/429 (55.71%), Query Frame = 0


Query: 26  FVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQKEELQKIIKELRVYKRFKHALEISK 85
           ++++ LY R+   G   + V   L+Q++   + V K E+   IK+LR    +  AL++S+
Sbjct: 20  YIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSE 79

Query: 86  WMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCYAHEKC 145
            M ++R +  +  D A  ++L+ +   +   E+YF ++P   K    + +LLNCY  E  
Sbjct: 80  VM-EERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELL 139

Query: 146 VDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDRFTYSI 205
            +KA   L K+KE+    S++ YN +M LY + GE E++ ++++E+K + V  D +TY++
Sbjct: 140 TEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNV 199

Query: 206 RLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGR 265
            + A AA +D +G+E+++E+M  +  +  DW  Y   A+ Y   GL  K+   L++ E  
Sbjct: 200 WMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELE-- 259

Query: 266 LATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYKK--EKIFNKGFISMIRSLLILDDIR 325
           +   ++   A+   + LY R GK  EV+RIW   +    K  N  +++MI+ L+ L+D+ 
Sbjct: 260 MKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLP 319

Query: 326 GAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWCYLA 385
           GAE ++KEW+    +YD+RI N+L+ AY + GLI+KA EL  +     GK + ++W    
Sbjct: 320 GAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFM 379

Query: 386 SGYLQKDQLPQAVETLKKAASL--------CPSELNYVKEILAAFSDGKQDVEEAEKVVN 444
             Y++   + +A+E + KA S+         PS    V+ +++ F + K+DV  AE ++ 
Sbjct: 380 DYYVKSGDMARALECMSKAVSIGKGDGGKWLPSP-ETVRALMSYF-EQKKDVNGAENLLE 439

[Close]

BLAST of IVF0001478 vs. ExPASy TrEMBL
Match: A0A5D3DSH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00760 PE=4 SV=1)

HSP 1 Score: 906.0 bits (2340), Expect = 6.4e-260
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60
           MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120
           KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180
           NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180

Query: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240
           FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV
Sbjct: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300
           IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK
Sbjct: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300

Query: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360
           KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA
Sbjct: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360

Query: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420
           EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF
Sbjct: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420

Query: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER 456
           SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER
Sbjct: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER 455

[Close]

BLAST of IVF0001478 vs. ExPASy TrEMBL
Match: A0A5A7UP59 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001650 PE=4 SV=1)

HSP 1 Score: 906.0 bits (2340), Expect = 6.4e-260
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60
           MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ
Sbjct: 507 MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 566

Query: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120
           KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF
Sbjct: 567 KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 626

Query: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180
           NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE
Sbjct: 627 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 686

Query: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240
           FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV
Sbjct: 687 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 746

Query: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300
           IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK
Sbjct: 747 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 806

Query: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360
           KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA
Sbjct: 807 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 866

Query: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420
           EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF
Sbjct: 867 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 926

Query: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER 456
           SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER
Sbjct: 927 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER 961

[Close]

BLAST of IVF0001478 vs. ExPASy TrEMBL
Match: A0A1S3B572 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486303 PE=4 SV=1)

HSP 1 Score: 906.0 bits (2340), Expect = 6.4e-260
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60
           MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120
           KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180
           NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180

Query: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240
           FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV
Sbjct: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300
           IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK
Sbjct: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300

Query: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360
           KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA
Sbjct: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360

Query: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420
           EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF
Sbjct: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420

Query: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER 456
           SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER
Sbjct: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER 455

[Close]

BLAST of IVF0001478 vs. ExPASy TrEMBL
Match: A0A0A0LV44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073790 PE=4 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 3.0e-225
Identity = 394/453 (86.98%), Postives = 420/453 (92.72%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60
           MKLLQS+KP NLIA R   VNFYST VKDNLYRRISPVGDPNISV P+LDQWVLEGR+VQ
Sbjct: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60

Query: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120
           ++EL+ IIKELRVYKRFKHALEISKWMSDKRY PLST D+A RMNLILRVHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180
           +NMPSQLKRY VHIALLNCYAHEKCVDKANAF+QKIKEMG+A S LPYNIMMNLYHQIGE
Sbjct: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGE 180

Query: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240
           FERLDSLLKEMKE+GVYYDRFTYSIR+SAYAAASD  GIEK+MEQMESN SIVLDWNCYV
Sbjct: 181 FERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300
           IAANAYNKVGLIDKS+SMLKKSEG LA  KKKG AFNVYLKLYARNGKKDE+HRIWNLYK
Sbjct: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300

Query: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360
           KEKIFNKGFISMI SL +LDDI+GAE IYKEWET+KLSYD+RIPNLLVDAYCRAGL+EKA
Sbjct: 301 KEKIFNKGFISMITSLFVLDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360

Query: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420
           E L+NE+V VR KFSVESWCYLASGYLQKDQLPQAVETLK AAS+CPS LNYVKEILAAF
Sbjct: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420

Query: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 454
            DGKQDVEE EKVVNLLREKD+ +PARAHD +V
Sbjct: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIV 453

[Close]

BLAST of IVF0001478 vs. ExPASy TrEMBL
Match: A0A5D3DRU6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00750 PE=4 SV=1)

HSP 1 Score: 735.7 bits (1898), Expect = 1.2e-208
Identity = 370/459 (80.61%), Postives = 409/459 (89.11%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60
           MKLLQSVK  NLIA RR LVNFYSTFV D+LYRR+SPVGDPNIS++P+LDQWV EGR VQ
Sbjct: 1   MKLLQSVKSINLIAFRRELVNFYSTFVNDDLYRRLSPVGDPNISIVPILDQWVSEGRPVQ 60

Query: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120
             EL+ IIKELRVYKR+KHALE+SKWMSDK  LPLST D+ATRMNLILRVHGLEQVEDYF
Sbjct: 61  IVELRLIIKELRVYKRYKHALEMSKWMSDKVCLPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180
           NNMPS+LKRY VHIALLNCYAHEKCVDKANA LQKIKE+G+A +  PYNIMMNLYHQIGE
Sbjct: 121 NNMPSKLKRYQVHIALLNCYAHEKCVDKANALLQKIKELGFATTPHPYNIMMNLYHQIGE 180

Query: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240
           FERLDSL+KEMKE+G+YYDRFTYSIRLSAYA ASDC GIEK+ EQMESNTSIVLDWNCYV
Sbjct: 181 FERLDSLMKEMKERGLYYDRFTYSIRLSAYATASDCAGIEKITEQMESNTSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSVSMLKKSEGRLA-TDKKKGHAFNVYLKLYARNGKKDEVHRIWNLY 300
           +AA+AY KVGLIDKS+SMLKKSE  LA T + K HAFN+YL LYA+NGKKDE +RIWNLY
Sbjct: 241 VAADAYYKVGLIDKSISMLKKSEELLAKTAENKCHAFNIYLTLYAKNGKKDETYRIWNLY 300

Query: 301 KKEKIFNKGFISMIRSLLILDDIRGAEDIYKE-----WETQKLSYDVRIPNLLVDAYCRA 360
           KKEK+FNKGFISMI SLLILDDI+GA  I +E     WETQKLSYD+RIPNLLVDAYCRA
Sbjct: 301 KKEKVFNKGFISMITSLLILDDIKGARRICEEWETQVWETQKLSYDLRIPNLLVDAYCRA 360

Query: 361 GLIEKAEELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVK 420
           GL+E+AE LV E++ VR KFSV+SWCY+ASGYLQKDQLP+AVETLK AASLCPS+L+YVK
Sbjct: 361 GLMEEAEVLVYEMMTVRRKFSVKSWCYIASGYLQKDQLPEAVETLKIAASLCPSKLDYVK 420

Query: 421 EILAAFSDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 454
           EILAAF DGKQDVEE EKVVNLLREKDN +PAR HD  +
Sbjct: 421 EILAAFLDGKQDVEEVEKVVNLLREKDNSHPARGHDYAI 459

[Close]

BLAST of IVF0001478 vs. NCBI nr
Match: KAA0056984.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 907 bits (2343), Expect = 0.0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60
           MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ
Sbjct: 507 MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 566

Query: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120
           KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF
Sbjct: 567 KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 626

Query: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180
           NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE
Sbjct: 627 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 686

Query: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240
           FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV
Sbjct: 687 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 746

Query: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300
           IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK
Sbjct: 747 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 806

Query: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360
           KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA
Sbjct: 807 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 866

Query: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420
           EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF
Sbjct: 867 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 926

Query: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER 455
           SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER
Sbjct: 927 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER 961

[Close]

BLAST of IVF0001478 vs. NCBI nr
Match: XP_008442434.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo] >TYK26412.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 907 bits (2343), Expect = 0.0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60
           MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120
           KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180
           NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180

Query: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240
           FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV
Sbjct: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300
           IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK
Sbjct: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300

Query: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360
           KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA
Sbjct: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360

Query: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420
           EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF
Sbjct: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420

Query: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER 455
           SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER
Sbjct: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVER 455

[Close]

BLAST of IVF0001478 vs. NCBI nr
Match: XP_011653157.2 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X1 [Cucumis sativus] >KAE8652711.1 hypothetical protein Csa_013210 [Cucumis sativus])

HSP 1 Score: 793 bits (2049), Expect = 1.44e-287
Identity = 396/453 (87.42%), Postives = 421/453 (92.94%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60
           MKLLQS+KP NLIA R   VNFYST VKDNLYRRISPVGDPNISV P+LDQWVLEGR+VQ
Sbjct: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60

Query: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120
           ++EL+ IIKELRVYKRFKHALEISKWMSDKRY PLST D+A RMNLILRVHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180
           +NMPSQLKRY VHIALLNCYAHEKCVDKANAF+QKIKEMG+A S LPYNIMMNLYHQIGE
Sbjct: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGE 180

Query: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240
           FERLDSLLKEMKE+GVYYDRFTYSIR+SAYAAASD  GIEK+MEQMESN SIVLDWNCYV
Sbjct: 181 FERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300
           IAANAYNKVGLIDKS+SMLKKSEG LA  KKKG AFNVYLKLYARNGKKDE+HRIWNLYK
Sbjct: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300

Query: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360
           KEKIFNKGFISMI SLLILDDI+GAE IYKEWET+KLSYD+RIPNLLVDAYCRAGL+EKA
Sbjct: 301 KEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360

Query: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420
           E L+NE+V VR KFSVESWCYLASGYLQKDQLPQAVETLK AAS+CPS LNYVKEILAAF
Sbjct: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420

Query: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 453
            DGKQDVEE EKVVNLLREKD+ +PARAHD +V
Sbjct: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIV 453

[Close]

BLAST of IVF0001478 vs. NCBI nr
Match: XP_008442448.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo] >TYK26411.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 736 bits (1901), Expect = 5.55e-265
Identity = 370/459 (80.61%), Postives = 409/459 (89.11%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60
           MKLLQSVK  NLIA RR LVNFYSTFV D+LYRR+SPVGDPNIS++P+LDQWV EGR VQ
Sbjct: 1   MKLLQSVKSINLIAFRRELVNFYSTFVNDDLYRRLSPVGDPNISIVPILDQWVSEGRPVQ 60

Query: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120
             EL+ IIKELRVYKR+KHALE+SKWMSDK  LPLST D+ATRMNLILRVHGLEQVEDYF
Sbjct: 61  IVELRLIIKELRVYKRYKHALEMSKWMSDKVCLPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180
           NNMPS+LKRY VHIALLNCYAHEKCVDKANA LQKIKE+G+A +  PYNIMMNLYHQIGE
Sbjct: 121 NNMPSKLKRYQVHIALLNCYAHEKCVDKANALLQKIKELGFATTPHPYNIMMNLYHQIGE 180

Query: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240
           FERLDSL+KEMKE+G+YYDRFTYSIRLSAYA ASDC GIEK+ EQMESNTSIVLDWNCYV
Sbjct: 181 FERLDSLMKEMKERGLYYDRFTYSIRLSAYATASDCAGIEKITEQMESNTSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSVSMLKKSEGRLA-TDKKKGHAFNVYLKLYARNGKKDEVHRIWNLY 300
           +AA+AY KVGLIDKS+SMLKKSE  LA T + K HAFN+YL LYA+NGKKDE +RIWNLY
Sbjct: 241 VAADAYYKVGLIDKSISMLKKSEELLAKTAENKCHAFNIYLTLYAKNGKKDETYRIWNLY 300

Query: 301 KKEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQ-----KLSYDVRIPNLLVDAYCRA 360
           KKEK+FNKGFISMI SLLILDDI+GA  I +EWETQ     KLSYD+RIPNLLVDAYCRA
Sbjct: 301 KKEKVFNKGFISMITSLLILDDIKGARRICEEWETQVWETQKLSYDLRIPNLLVDAYCRA 360

Query: 361 GLIEKAEELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVK 420
           GL+E+AE LV E++ VR KFSV+SWCY+ASGYLQKDQLP+AVETLK AASLCPS+L+YVK
Sbjct: 361 GLMEEAEVLVYEMMTVRRKFSVKSWCYIASGYLQKDQLPEAVETLKIAASLCPSKLDYVK 420

Query: 421 EILAAFSDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 453
           EILAAF DGKQDVEE EKVVNLLREKDN +PAR HD  +
Sbjct: 421 EILAAFLDGKQDVEEVEKVVNLLREKDNSHPARGHDYAI 459

[Close]

BLAST of IVF0001478 vs. NCBI nr
Match: XP_022140106.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Momordica charantia])

HSP 1 Score: 656 bits (1693), Expect = 2.01e-233
Identity = 322/454 (70.93%), Postives = 384/454 (84.58%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60
           MKLL   K  + +A RR L +FYS   +D+LYRRISPVGDPN+SVIPVLDQWV EGR VQ
Sbjct: 1   MKLLVPGKQVHPVAFRRILGHFYSMIARDSLYRRISPVGDPNVSVIPVLDQWVREGRPVQ 60

Query: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120
           +EELQKIIKELR+YKR KHALEISKWM DKRYLPLS+ D+ATRMNLILRVHGLEQVEDYF
Sbjct: 61  REELQKIIKELRIYKRSKHALEISKWMGDKRYLPLSSVDIATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180
           N++PSQLK++ VH+ALLNCYAHEKCVDKANA LQKIKEMG+  + LPYNIMMNLY+QIGE
Sbjct: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANAILQKIKEMGFDGAPLPYNIMMNLYYQIGE 180

Query: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240
           FERLD LL+EM+EKGV YDR+TYSIRLSAYA ASD  G++ ++E+ME +  IV DW+CYV
Sbjct: 181 FERLDPLLQEMEEKGVSYDRYTYSIRLSAYAVASDIKGVDNIVERMELDPRIVPDWSCYV 240

Query: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300
           IAAN Y KVGL+DKS+SML+KSE  LAT K++G AF++ LKLYA +GKKDE+HRIW LYK
Sbjct: 241 IAANGYLKVGLVDKSLSMLRKSEALLATAKRRGSAFDILLKLYAESGKKDELHRIWKLYK 300

Query: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360
           KEK++NKG++SM+RSLLILDDI  AE I+K+WET KLS D+RIPN+L++AYCR GL+EKA
Sbjct: 301 KEKVYNKGYMSMMRSLLILDDIEAAEHIFKDWETWKLSNDLRIPNMLIEAYCRRGLMEKA 360

Query: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420
           E L+N+ V  + KFSV SWCYLA+ Y+QKDQL   VE LKKAA+LCP ELN+ KEILA F
Sbjct: 361 EALINKAVTGKSKFSVHSWCYLANAYIQKDQLQHTVEALKKAATLCPPELNHFKEILATF 420

Query: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVE 454
            +GKQDV+EAEKVV LLR +   N   AHD+L++
Sbjct: 421 LEGKQDVKEAEKVVGLLRAE--ANSLFAHDVLID 452

[Close]

BLAST of IVF0001478 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 336.3 bits (861), Expect = 3.9e-92
Identity = 172/420 (40.95%), Postives = 268/420 (63.81%), Query Frame = 0


Query: 29  DNLYRRISPVGDPNISVIPVLDQWVLEGRVVQKEELQKIIKELRVYKRFKHALEISKWMS 88
           D L RR++  GDP+ S+I VLD W+ +G +V+  EL  IIK LR + RF HAL+IS WMS
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 89  DKRYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCYAHEKCVDK 148
           + R   +S  DVA R++LI +V GL + E +F  +P + + YH++ ALLNCYA +K + K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 149 ANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDRFTYSIRLS 208
           A    Q++KE+G+ K  LPYN+M+NLY + G++  ++ LL+EM+++ V  D FT + RL 
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 209 AYAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLAT 268
           AY+  SD  G+EK + + E++  + LDW  Y   AN Y K GL +K++ ML+KSE  +  
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277

Query: 269 DKKKGHAFNVYLKLYARNGKKDEVHRIWNLYKK-EKIFNKGFISMIRSLLILDDIRGAED 328
            K+K HA+ V +  Y   GKK+EV+R+W+LYK+ +  +N G+IS+I +LL +DDI   E 
Sbjct: 278 QKRK-HAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEK 337

Query: 329 IYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWCYLASGYL 388
           I +EWE     +D+RIP+LL+  YC+ G++EKAEE+VN +V         +W  LA GY 
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 397

Query: 389 QKDQLPQAVETLKKAASLCPSELNYVKEILAA---FSDGKQDVEEAEKVVNLLREKDNLN 445
              ++ +AVE  K+A  +        + +L +   + +G++D+E   K++ LL E+ +++
Sbjct: 398 MAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS 456

[Close]

BLAST of IVF0001478 vs. TAIR 10
Match: AT2G20710.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 276.6 bits (706), Expect = 3.7e-74
Identity = 142/362 (39.23%), Postives = 228/362 (62.98%), Query Frame = 0


Query: 87  MSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCYAHEKCV 146
           MS+ R   +S  DVA R++LI +V GL + E +F  +P + + YH++ ALLNCYA +K +
Sbjct: 1   MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60

Query: 147 DKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDRFTYSIR 206
            KA    Q++KE+G+ K  LPYN+M+NLY + G++  ++ LL+EM+++ V  D FT + R
Sbjct: 61  HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120

Query: 207 LSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRL 266
           L AY+  SD  G+EK + + E++  + LDW  Y   AN Y K GL +K++ ML+KSE  +
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 180

Query: 267 ATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYKK-EKIFNKGFISMIRSLLILDDIRGA 326
              K+K HA+ V +  Y   GKK+EV+R+W+LYK+ +  +N G+IS+I +LL +DDI   
Sbjct: 181 NAQKRK-HAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEV 240

Query: 327 EDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWCYLASG 386
           E I +EWE     +D+RIP+LL+  YC+ G++EKAEE+VN +V         +W  LA G
Sbjct: 241 EKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALG 300

Query: 387 YLQKDQLPQAVETLKKAASLCPSELNYVKEILAA---FSDGKQDVEEAEKVVNLLREKDN 445
           Y    ++ +AVE  K+A  +        + +L +   + +G++D+E   K++ LL E+ +
Sbjct: 301 YKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGH 360

[Close]

BLAST of IVF0001478 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 276.2 bits (705), Expect = 4.8e-74
Identity = 170/462 (36.80%), Postives = 261/462 (56.49%), Query Frame = 0


Query: 1   MKLLQSVKPTNLIALRRGLVNFYSTFV-KDNLYRRISPVGDPNISVIPVLDQWVLEGRVV 60
           M +L+ + P NLIA R     +Y+  V K  LY +ISP+GDP  SV P L  WV  G+ V
Sbjct: 1   MNILRRI-PANLIASR----YYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKV 60

Query: 61  QKEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDY 120
              EL +I+ +LR  KRF HALE+SKWM++      S  + A  ++LI RV+G    E+Y
Sbjct: 61  SVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEY 120

Query: 121 FNNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIG 180
           F N+  Q K    + ALLNCY  ++ V+K+    +K+KEMG+  S+L YN +M LY  IG
Sbjct: 121 FENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIG 180

Query: 181 EFERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCY 240
           + E++  +L+EMKE+ V  D ++Y I ++A+ A  D   I   +  ME    I +DWN Y
Sbjct: 181 QHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTY 240

Query: 241 VIAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLY 300
            +AA  Y   G  D++V +LK SE RL  +KK G  +N  + LYAR GKK EV R+W+L 
Sbjct: 241 AVAAKFYIDGGDCDRAVELLKMSENRL--EKKDGEGYNHLITLYARLGKKIEVLRLWDLE 300

Query: 301 KK--EKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLI 360
           K   ++  N+ ++++++SL+ +D +  AE++  EW++    YD R+PN ++  Y    + 
Sbjct: 301 KDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSME 360

Query: 361 EKAEELVNEIVNVRGKFSV-ESWCYLASGYLQKDQLPQAVETLKKAASLCPSE------L 420
           EKAE ++ ++   RGK +  ESW  +A+ Y +K  L  A + +K A  +          L
Sbjct: 361 EKAEAMLEDLAR-RGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGL 420

Query: 421 NYVKEILAAFSDGKQDVEEAEKVVNLLREKDNLNPARAHDIL 453
             V  +L+   D +  ++E E  V  LR    +N    H ++
Sbjct: 421 TLVTSVLSWVGD-EGSLKEVESFVASLRNCIGVNKQMYHALV 453

[Close]

BLAST of IVF0001478 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 254.6 bits (649), Expect = 1.5e-67
Identity = 146/421 (34.68%), Postives = 241/421 (57.24%), Query Frame = 0


Query: 31  LYRRISPVGDPNISVIPVLDQWVLEGRVVQKEELQKIIKELRVYKRFKHALEISKWMSDK 90
           +Y++IS +  P +    VL+QW   GR + K EL +++KELR YKR   ALE+  WM+++
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 91  -RYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCYAHEKCVDKA 150
                LS  D A +++LI +V G+   E++F  +P   K   V+ +LLN Y   K  +KA
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 151 NAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDRFTYSIRLSA 210
            A L  +++ GYA   LP+N+MM LY  + E++++D+++ EMK+K +  D ++Y+I LS+
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 211 YAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLATD 270
             +      +E + +QM+S+ SI  +W  +   A  Y K+G  +K+   L+K E R+   
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARIT-- 308

Query: 271 KKKGHAFNVYLKLYARNGKKDEVHRIWNLYKK--EKIFNKGFISMIRSLLILDDIRGAED 330
            +    ++  L LY   G K E++R+W++YK     I N G+ +++ SL+ + DI GAE 
Sbjct: 309 GRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEK 368

Query: 331 IYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWCYLASGYL 390
           +Y+EW   K SYD RIPNLL++AY +   +E AE L + +V + GK S  +W  LA G+ 
Sbjct: 369 VYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHT 428

Query: 391 QKDQLPQAVETLKKAASLCPSELNYVKEILA-----AFSDGKQDVEEAEKVVNLLREKDN 444
           +K  + +A+  L+ A S      N+  ++L         + + DV   E V+ LLR+  +
Sbjct: 429 RKRCISEALTCLRNAFS-AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 486

[Close]

BLAST of IVF0001478 vs. TAIR 10
Match: AT1G28020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 4.8e-58
Identity = 128/335 (38.21%), Postives = 197/335 (58.81%), Query Frame = 0


Query: 34  RISPVGDPNISVIPVLDQWVLEGRVVQKEELQKIIKELRVYKRFKHALEISKWMSDKRYL 93
           RI+     N  +IPVL+QW  +G  V    ++ IIK+LR   +   AL++S+WMS ++  
Sbjct: 41  RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100

Query: 94  PLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCYAH-EKCVDKANAF 153
            L  +D A R++LI  V GLE+ E +F ++P   +   V+ +LLN YA  +K + KA A 
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEAT 160

Query: 154 LQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDRFTYSIRLSAYAA 213
            QK++++G     +PYN MM+LY  +   E+++ LL EMK+  V  D  T +  L  Y+A
Sbjct: 161 FQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSA 220

Query: 214 ASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLATDKKK 273
             D T +EK + + E    I L+W+  +  A AY +     K++ ML+ +E +L   K  
Sbjct: 221 VCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTE-QLVDQKSL 280

Query: 274 GHAFNVYLKLYARNGKKDEVHRIWNLYKKE--KIFNKGFISMIRSLLILDDIRGAEDIYK 333
             A++  +KLY   G ++EV R+W LYK +  +  N G+ ++IRSLL +DDI GAE+IYK
Sbjct: 281 KSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYK 340

Query: 334 EWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVN 366
            WE+  L +D RIP +L   Y   G+ EKAE+L+N
Sbjct: 341 VWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMN 374

The following BLAST results are available for this feature:

BLAST of IVF0001478 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKU6	5.5e-91	40.95	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q84JR3	6.8e-73	36.80	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
Q8LPS6	2.1e-66	34.68	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
Q9C7F1	6.8e-57	38.21	Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis th...	[more]
O22714	2.2e-55	30.77	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]

BLAST of IVF0001478 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DSH1	6.4e-260	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7UP59	6.4e-260	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B572	6.4e-260	100.00	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
A0A0A0LV44	3.0e-225	86.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073790 PE=4 SV=1	[more]
A0A5D3DRU6	1.2e-208	80.61	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of IVF0001478 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056984.1	0.0	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008442434.1	0.0	100.00	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_011653157.2	1.44e-287	87.42	pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X1 ...	[more]
XP_008442448.1	5.55e-265	80.61	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_022140106.1	2.01e-233	70.93	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Momor...	[more]

BLAST of IVF0001478 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20710.1	3.9e-92	40.95	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.2	3.7e-74	39.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	4.8e-74	36.80	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	1.5e-67	34.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G28020.1	4.8e-58	38.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 231..449 e-value: 1.3E-17 score: 66.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 59..217 e-value: 2.6E-17 score: 64.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 312..418
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 345..368 e-value: 5.1E-4 score: 18.0 coord: 168..199 e-value: 2.7E-4 score: 18.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 135..160 e-value: 0.25 score: 11.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 345..367 e-value: 1.9E-5 score: 24.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 168..211 e-value: 7.5E-8 score: 32.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 164..198 score: 9.174665
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 7..443
None	No IPR available	PANTHER	PTHR45717:SF28	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 7..443
IPR002057	Isopenicillin N synthase, conserved site	PROSITE	PS00185	IPNS_1	coord: 373..382
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 376..409 score: 9.3224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001478.2	IVF0001478.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding