IVF0001477 (gene) Melon (IVF77) v1

Overview
NameIVF0001477
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Locationchr06: 21278513 .. 21282957 (-)
RNA-Seq ExpressionIVF0001477
SyntenyIVF0001477
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCAGAGGTTTAGAGATATGATTATGCAAATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGTTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCGGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTTGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACCTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACGAGGCGGCCAGAGCTGACAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACGTCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCAATACCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGACAGATGCCCGTTGAGAGTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCAGAGAAGGCGGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTTGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGTTAGCAGGCCATGTGATTGAGGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCCAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGATTACCTCCGCACAGGGAGGTTGAGTTTGCCATAGAGTTGGAGCCAGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGATGGGTCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAAGTAACGGTAAAGAACAGATATCCCTTACCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCAGGATACCATCAGTTGAGGATTAAGGATGAGGATATACCGAAGACAGCATTTCGATCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTCGTGATTGTGTTTATCGACGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTCTTGCAAACACTTCGGGATAATAAGTTATATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTGGGCCACGTGGTTCCAAGGCGGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCAGTTCTCACGGTACCGATGGTTCTGGCAATTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTGGAGTTGGCAGCAGTGGTTTTTGCTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGACTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCCCTTAGTAGGAAAGTATCACATTCAGCAGCACTCATTACCCGGCAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTATTTGAGGGACGCCTCTGTGTTCCGTCGGATGGTGTGATTAAGACAGAATTATTATCTGAGGCGCACAGCTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGAGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCCTGGTATGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAGCCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTACAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCCTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTACGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCAATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCATTTGAGATCCTGGAGCGGATTGGCCCTGTAGCTTACCGCTTGGCGTTGCCTCCATCACTCTCGGCAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACGACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGGAATAAACAAATTCCCCTAGTTAAAGTCTTGTGGCGGAATCACCGGGTAGAAGAGGCTACATGGGAGCGAGAAGATGACATGAGATCCCGTTATCCCGAACTGTTCGAGGAATAA

mRNA sequence

ATGGAGCAGAGGTTTAGAGATATGATTATGCAAATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGTTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCGGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTTGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACCTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACGAGGCGGCCAGAGCTGACAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACGTCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCAATACCACAGCGGAATTTCAGACCAGGTGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGACAGATGCCCGTTGAGAGTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCAGAGAAGGCGGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTTGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGTTAGCAGGCCATGTGATTGAGGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCCAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGATTACCTCCGCACAGGGAGGTTGAGTTTGCCATAGAGTTGGAGCCAGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGATGGGTCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAAGTAACGGTAAAGAACAGATATCCCTTACCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCAGGATACCATCAGTTGAGGATTAAGGATGAGGATATACCGAAGACAGCATTTCGATCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTCGTGATTGTGTTTATCGACGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTCTTGCAAACACTTCGGGATAATAAGTTATATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGCGGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCAGTTCTCACGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTGGAGTTGGCAGCAGTGGTTTTTGCTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGACTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCCCTTAGTAGGAAAGTATCACATTCAGCAGCACTCATTACCCGGCAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTATTTGAGGGACGCCTCTGTGTTCCGTCGGATGGTGTGATTAAGACAGAATTATTATCTGAGGCGCACAGCTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGAGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCCTGGTATGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAGCCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTACAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCCTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTACGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCAATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCATTTGAGATCCTGGAGCGGATTGGCCCTGTAGCTTACCGCTTGGCGTTGCCTCCATCACTCTCGGCAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACGACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGGAATAAACAAATTCCCCTAGTTAAAGTCTTGTGGCGGAATCACCGGGTAGAAGAGGCTACATGGGAGCGAGAAGATGACATGAGATCCCGTTATCCCGAACTGTTCGAGGAATAA

Coding sequence (CDS)

ATGGAGCAGAGGTTTAGAGATATGATTATGCAAATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGTTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCGGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTTGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACCTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACGAGGCGGCCAGAGCTGACAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACGTCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCAATACCACAGCGGAATTTCAGACCAGGTGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGACAGATGCCCGTTGAGAGTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCAGAGAAGGCGGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTTGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGTTAGCAGGCCATGTGATTGAGGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCCAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGATTACCTCCGCACAGGGAGGTTGAGTTTGCCATAGAGTTGGAGCCAGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGATGGGTCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAAGTAACGGTAAAGAACAGATATCCCTTACCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCAGGATACCATCAGTTGAGGATTAAGGATGAGGATATACCGAAGACAGCATTTCGATCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTCGTGATTGTGTTTATCGACGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTCTTGCAAACACTTCGGGATAATAAGTTATATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGCGGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCAGTTCTCACGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTGGAGTTGGCAGCAGTGGTTTTTGCTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGACTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCCCTTAGTAGGAAAGTATCACATTCAGCAGCACTCATTACCCGGCAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTATTTGAGGGACGCCTCTGTGTTCCGTCGGATGGTGTGATTAAGACAGAATTATTATCTGAGGCGCACAGCTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGAGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCCTGGTATGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAGCCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTACAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCCTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTACGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCAATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCATTTGAGATCCTGGAGCGGATTGGCCCTGTAGCTTACCGCTTGGCGTTGCCTCCATCACTCTCGGCAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACGACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGGAATAAACAAATTCCCCTAGTTAAAGTCTTGTGGCGGAATCACCGGGTAGAAGAGGCTACATGGGAGCGAGAAGATGACATGAGATCCCGTTATCCCGAACTGTTCGAGGAATAA

Protein sequence

MEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATRRPELTSLLEASDWTFRVWSELSDPLLMPMHCAWQWISVYRRGPTRLRPLVEVRRRDRRGRLSSSLFNTTAEFQTRWTCFKCRQEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIELAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGRLCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVERPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Homology
[Close]
BLAST of IVF0001477 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 6.8e-132
Identity = 286/893 (32.03%), Postives = 463/893 (51.85%), Query Frame = 0 

Query: 491  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 550
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 551  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 610
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 611  QLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 670
             +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 671  LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEF----------WLKQAGVSVDPAKIE 730
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF           + + G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 731  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 790
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 791  LKQKLVTAPVLTQ------------------GKV------------VAYASRQLKSHEQN 850
            +KQ LV+ PVL                    G V            V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 851  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 910
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 911  KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 970
            +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811  QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 971  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGR--LCVPSDGVI 1030
            +++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D  +
Sbjct: 871  ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

Query: 1031 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA 1090
               ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Sbjct: 931  TRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPY 990

Query: 1091 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 1150
            G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Sbjct: 991  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1050

Query: 1151 QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQ 1210
            +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ
Sbjct: 1051 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1110

Query: 1211 VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRC-CRSPVCWGEVG 1270
             +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1111 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1170

Query: 1271 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPMKG 1330
                   E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G
Sbjct: 1171 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1230

Query: 1331 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY 1335
             L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 FL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0001477 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 6.8e-132
Identity = 286/893 (32.03%), Postives = 463/893 (51.85%), Query Frame = 0 

Query: 491  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 550
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 551  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 610
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 611  QLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 670
             +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 671  LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEF----------WLKQAGVSVDPAKIE 730
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF           + + G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 731  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 790
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 791  LKQKLVTAPVLTQ------------------GKV------------VAYASRQLKSHEQN 850
            +KQ LV+ PVL                    G V            V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 851  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 910
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 911  KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 970
            +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811  QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 971  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGR--LCVPSDGVI 1030
            +++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D  +
Sbjct: 871  ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

Query: 1031 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA 1090
               ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Sbjct: 931  TRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPY 990

Query: 1091 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 1150
            G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Sbjct: 991  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1050

Query: 1151 QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQ 1210
            +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ
Sbjct: 1051 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1110

Query: 1211 VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRC-CRSPVCWGEVG 1270
             +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1111 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1170

Query: 1271 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPMKG 1330
                   E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G
Sbjct: 1171 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1230

Query: 1331 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY 1335
             L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 FL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0001477 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 6.8e-132
Identity = 286/893 (32.03%), Postives = 463/893 (51.85%), Query Frame = 0 

Query: 491  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 550
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 551  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 610
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 611  QLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 670
             +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 671  LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEF----------WLKQAGVSVDPAKIE 730
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF           + + G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 731  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 790
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 791  LKQKLVTAPVLTQ------------------GKV------------VAYASRQLKSHEQN 850
            +KQ LV+ PVL                    G V            V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 851  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 910
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 911  KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 970
            +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811  QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 971  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGR--LCVPSDGVI 1030
            +++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D  +
Sbjct: 871  ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

Query: 1031 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA 1090
               ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Sbjct: 931  TRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPY 990

Query: 1091 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 1150
            G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Sbjct: 991  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1050

Query: 1151 QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQ 1210
            +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ
Sbjct: 1051 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1110

Query: 1211 VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRC-CRSPVCWGEVG 1270
             +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1111 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1170

Query: 1271 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPMKG 1330
                   E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G
Sbjct: 1171 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1230

Query: 1331 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY 1335
             L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 FL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0001477 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 6.8e-132
Identity = 286/893 (32.03%), Postives = 463/893 (51.85%), Query Frame = 0 

Query: 491  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 550
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 551  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 610
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 611  QLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 670
             +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 671  LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEF----------WLKQAGVSVDPAKIE 730
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF           + + G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 731  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 790
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 791  LKQKLVTAPVLTQ------------------GKV------------VAYASRQLKSHEQN 850
            +KQ LV+ PVL                    G V            V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 851  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 910
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 911  KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 970
            +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811  QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 971  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGR--LCVPSDGVI 1030
            +++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D  +
Sbjct: 871  ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

Query: 1031 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA 1090
               ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Sbjct: 931  TRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPY 990

Query: 1091 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 1150
            G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Sbjct: 991  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1050

Query: 1151 QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQ 1210
            +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ
Sbjct: 1051 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1110

Query: 1211 VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRC-CRSPVCWGEVG 1270
             +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1111 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1170

Query: 1271 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPMKG 1330
                   E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G
Sbjct: 1171 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1230

Query: 1331 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY 1335
             L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 FL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0001477 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 6.8e-132
Identity = 286/893 (32.03%), Postives = 463/893 (51.85%), Query Frame = 0 

Query: 491  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 550
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 551  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 610
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 611  QLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 670
             +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 671  LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEF----------WLKQAGVSVDPAKIE 730
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF           + + G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 731  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 790
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 791  LKQKLVTAPVLTQ------------------GKV------------VAYASRQLKSHEQN 850
            +KQ LV+ PVL                    G V            V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 851  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 910
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 911  KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 970
            +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811  QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 971  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGR--LCVPSDGVI 1030
            +++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D  +
Sbjct: 871  ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

Query: 1031 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA 1090
               ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Sbjct: 931  TRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPY 990

Query: 1091 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 1150
            G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Sbjct: 991  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1050

Query: 1151 QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQ 1210
            +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ
Sbjct: 1051 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1110

Query: 1211 VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRC-CRSPVCWGEVG 1270
             +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1111 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1170

Query: 1271 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPMKG 1330
                   E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G
Sbjct: 1171 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1230

Query: 1331 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY 1335
             L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 FL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0001477 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 2546.2 bits (6598), Expect = 0.0e+00
Identity = 1311/1475 (88.88%), Postives = 1337/1475 (90.64%), Query Frame = 0 

Query: 14   EQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDG 73
            + +KPASPTPAPAPAPAPAPVPAPAPA VPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDG
Sbjct: 23   QPEKPASPTPAPAPAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDG 82

Query: 74   SLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQIT 133
            SLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQIT
Sbjct: 83   SLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQIT 142

Query: 134  WQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATR---- 193
            WQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIAT     
Sbjct: 143  WQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARA 202

Query: 194  -------RPELTSLLEASDWTFRVWSELSDPLLMPMHCAWQWIS----VYRRGPT----- 253
                   R ++  L+ A    FR  +  +D L + +  + Q ++       RG T     
Sbjct: 203  DKFVRGLRLDIQGLVRA----FRPATH-ADALRLAVDLSLQEMANSSKTAGRGSTSGQKR 262

Query: 254  --RLRPLVEVRRRDRRGRLSSSLFNTTAE-----------------------FQTRWTCF 313
                +P+   +R  R G    S      E                       F TR TCF
Sbjct: 263  KAEQQPVPVPQRNFRSGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTR-TCF 322

Query: 314  KCRQEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYAL 373
            KCRQEGHTADRCPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYAL
Sbjct: 323  KCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYAL 382

Query: 374  VLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIELAGHVIE 433
            VLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLS+EKVKACQIE+AGHVIE
Sbjct: 383  VLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIE 442

Query: 434  VTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISA 493
            VTLIVLDMLDFDVILGMDWLAANHASIDCSRK+VTFNPPSMASFKFKGGGSKSLPQVISA
Sbjct: 443  VTLIVLDMLDFDVILGMDWLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISA 502

Query: 494  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 553
            IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL
Sbjct: 503  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 562

Query: 554  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 613
            EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCI
Sbjct: 563  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCI 622

Query: 614  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRY 673
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDED+PKTAFRSRY
Sbjct: 623  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRY 682

Query: 674  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 733
            GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 683  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 742

Query: 734  QTLRDNKLYAKFSKCEFWLKQ----------AGVSVDPAKIEAVTGWTRPSTVSEVRSFL 793
            QTLRDNKLYAKFSKCEFWLKQ          A VSVDPAKIEAVTGWTRPSTVSEVRSFL
Sbjct: 743  QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFL 802

Query: 794  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLT------ 853
            GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLT      
Sbjct: 803  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG 862

Query: 854  -------------------QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 913
                               QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 863  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 922

Query: 914  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 973
            GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH
Sbjct: 923  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 982

Query: 974  SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL 1033
            SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL
Sbjct: 983  SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL 1042

Query: 1034 AEAGQTAEFSLSSDGGLLFEGRLCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRV 1093
            AEAGQ  EFSLSSDGGL FEGRLCVPSD  +KTELL EAHSSPFSMHPGSTKMYQDLKRV
Sbjct: 1043 AEAGQAVEFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV 1102

Query: 1094 YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 1153
            YWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR
Sbjct: 1103 YWWRNMKREVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 1162

Query: 1154 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1213
            GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1163 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1222

Query: 1214 WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1273
            WKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1223 WKGLQTAMGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1282

Query: 1274 NSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 1333
            NSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR
Sbjct: 1283 NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 1342

Query: 1334 QKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 1393
            QKSYADVRRKDLEFEI DKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRL
Sbjct: 1343 QKSYADVRRKDLEFEIRDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 1402

Query: 1394 ALPPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVERPVEVLAREVKTLRNK 1409
            ALPPSLS VHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVE+PVEVLAREVKTLRNK
Sbjct: 1403 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK 1462

[Close]
BLAST of IVF0001477 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 2488.8 bits (6449), Expect = 0.0e+00
Identity = 1283/1485 (86.40%), Postives = 1318/1485 (88.75%), Query Frame = 0 

Query: 1    MEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL 60
            MEQRFRD+IMQMREQQKPASPTPAPAPAPAPAP PAPA APVPVAPQFVPDQLSAEAKHL
Sbjct: 47   MEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHL 106

Query: 61   RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 120
            RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET
Sbjct: 107  RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 166

Query: 121  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
            TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 167  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 226

Query: 181  FAPEMIATR-----------RPELTSLLEA------SDWTFRVWSELS-DPLLMPMHCAW 240
            FAPEMIAT            R ++  L+ A      +D   R+  +LS          A 
Sbjct: 227  FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHAD-ALRLAVDLSLQERANSSKTAG 286

Query: 241  QWISVYRRGPTRLRPLVEVRRRDRRG----RLSSSLFNTTAEFQTRW------------- 300
            + ++  ++     +P+   +R  R G    R     F   A    RW             
Sbjct: 287  RGLTSGQKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFE--AGEAARWKPLCTICGKHHLG 346

Query: 301  -------TCFKCRQEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTG 360
                   TCFKCRQEGHTADRCPLR+TG AQNQGAGAPHQGRVFATN+TEAEKAGTVVTG
Sbjct: 347  RCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 406

Query: 361  TLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKAC 420
            TLPVLGHYALVLFD                           SVSTPSGECMLSKEKVK C
Sbjct: 407  TLPVLGHYALVLFD---------------------------SVSTPSGECMLSKEKVKTC 466

Query: 421  QIELAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGG 480
            QIE+AGHVIEVTL+VLDMLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGG
Sbjct: 467  QIEIAGHVIEVTLLVLDMLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGG 526

Query: 481  SKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPP 540
            S+SLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPP
Sbjct: 527  SRSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPP 586

Query: 541  HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 600
            HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK
Sbjct: 587  HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 646

Query: 601  KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED 660
            KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED
Sbjct: 647  KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED 706

Query: 661  IPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA 720
            +PKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA
Sbjct: 707  VPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA 766

Query: 721  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQ----------AGVSVDPAKIEAVTGWTRP 780
            EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQ          AGVSVDPAKIEAVTGWTRP
Sbjct: 767  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRP 826

Query: 781  STVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTA 840
            STVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTA
Sbjct: 827  STVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA 886

Query: 841  PVLT-------------------------QGKVVAYASRQLKSHEQNYPTHDLELAAVVF 900
            PVLT                         QGKVVAYASRQLKSHEQNYPTHDLELAAVVF
Sbjct: 887  PVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF 946

Query: 901  ALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV 960
            ALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV
Sbjct: 947  ALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV 1006

Query: 961  ADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSN 1020
            ADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSN
Sbjct: 1007 ADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSN 1066

Query: 1021 DPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGRLCVPSDGVIKTELLSEAHSSPFSMHPGS 1080
            DPYLVEKRGLAEAGQ  EFSLSSDGGLLFE RLCVPSD V+KTELLSEAHSSPFSMHPGS
Sbjct: 1067 DPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGS 1126

Query: 1081 TKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMD 1140
            TKMY+D+KRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMD
Sbjct: 1127 TKMYRDVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMD 1186

Query: 1141 FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS 1200
            FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS
Sbjct: 1187 FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS 1246

Query: 1201 DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS 1260
            DRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDS
Sbjct: 1247 DRDARFTSKFWKSLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDS 1306

Query: 1261 HLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKI 1320
            HLHLMEF YNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKI
Sbjct: 1307 HLHLMEFVYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKI 1366

Query: 1321 RSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEIL 1380
            RSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRF+GPFEIL
Sbjct: 1367 RSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFIGPFEIL 1426

Query: 1381 ERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVERPVEVL 1409
            ERIGPVAYRLALPPSLS VHDVFHVSMLRKYVPDPSHVVDY+PL+IDENLSY E+PVEVL
Sbjct: 1427 ERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYKPLKIDENLSYTEQPVEVL 1486

[Close]
BLAST of IVF0001477 vs. ExPASy TrEMBL
Match: A0A5A7VJE2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005560 PE=4 SV=1)

HSP 1 Score: 2476.8 bits (6418), Expect = 0.0e+00
Identity = 1286/1488 (86.42%), Postives = 1313/1488 (88.24%), Query Frame = 0 

Query: 1    MEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL 60
            MEQRFRDMIMQMREQQKP SP PAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL
Sbjct: 47   MEQRFRDMIMQMREQQKPVSPNPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL 106

Query: 61   RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 120
            RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET
Sbjct: 107  RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 166

Query: 121  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
            TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 167  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 226

Query: 181  FAPEMIATR-----------RPELTSLLEASDWTFRVWSELSDPLLMPMHCAWQ----WI 240
            FAPEMIAT            R ++  L+ A    FR  + + D L + +  + Q      
Sbjct: 227  FAPEMIATEAARADKFVRGLRLDIQGLVRA----FRPATHV-DALRLAVDLSLQERANSS 286

Query: 241  SVYRRGPT-------RLRPLVEVRRRDRRG----------------RLSSSLFNTTAE-- 300
                RG T         +P+   +R  R G                     L  T  +  
Sbjct: 287  KTAGRGSTSGQKRKAEQQPVPVPQRNFRSGGEFRYFQQKPFEAGEAARGKPLCTTCGKHH 346

Query: 301  -----FQTRWTCFKCRQEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV 360
                 F TR TCFKCRQEGHTADRCPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGT+
Sbjct: 347  LGRCLFGTR-TCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTI 406

Query: 361  VTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKV 420
            VTGTLPVLGHYALVLF SGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKV
Sbjct: 407  VTGTLPVLGHYALVLFYSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKV 466

Query: 421  KACQIELAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK 480
            KACQIE+AGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK
Sbjct: 467  KACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK 526

Query: 481  GGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG 540
            GGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Sbjct: 527  GGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG 586

Query: 541  LPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 600
            LPPHREVEFAIELE GTVPISRAPYRMAPAELK+LKVQLQELLDKG              
Sbjct: 587  LPPHREVEFAIELESGTVPISRAPYRMAPAELKDLKVQLQELLDKG-------------- 646

Query: 601  FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK 660
                            ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK
Sbjct: 647  ----------------ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK 706

Query: 661  DEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK 720
            DED+PKT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK
Sbjct: 707  DEDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK 766

Query: 721  TEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQ----------AGVSVDPAKIEAVTGW 780
            TEAEHEEHLRMVLQTLRD KLYAKFSKCEFWLKQ          AGVSVDPAKIEAVTGW
Sbjct: 767  TEAEHEEHLRMVLQTLRDYKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW 826

Query: 781  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKL 840
            TRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKL
Sbjct: 827  TRPSTVSEVRSFLGLVGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKL 886

Query: 841  VTAPVLT-------------------------QGKVVAYASRQLKSHEQNYPTHDLELAA 900
            VTAPVLT                         QGKVVAYASRQLKSHEQNYPTHDLELAA
Sbjct: 887  VTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA 946

Query: 901  VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKA 960
            VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKA
Sbjct: 947  VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKA 1006

Query: 961  NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 1020
            NVVADALSRKVSHS ALITRQAPLHRDLERAEIAVS+GAVTMQLA+L VQPTLRQRIIDA
Sbjct: 1007 NVVADALSRKVSHSVALITRQAPLHRDLERAEIAVSMGAVTMQLARLAVQPTLRQRIIDA 1066

Query: 1021 QSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGRLCVPSDGVIKTELLSEAHSSPFSMH 1080
            Q NDPYLVEKRGL EAGQTAEFSLSSDGGLLFE RLCVPSD  +K ELLSEAHSSPFSMH
Sbjct: 1067 QGNDPYLVEKRGLVEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKIELLSEAHSSPFSMH 1126

Query: 1081 PGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV 1140
            PGSTK+YQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV
Sbjct: 1127 PGSTKIYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV 1186

Query: 1141 SMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVS 1200
            SMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVS
Sbjct: 1187 SMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVS 1246

Query: 1201 IVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGS 1260
            IVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGS
Sbjct: 1247 IVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGS 1306

Query: 1261 WDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAI 1320
            WDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAI
Sbjct: 1307 WDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAI 1366

Query: 1321 QKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPF 1380
            QKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPRFVGPF
Sbjct: 1367 QKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPF 1426

Query: 1381 EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVERPV 1409
            EILERIGPVAYRLALPPSLS VHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY ERPV
Sbjct: 1427 EILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTERPV 1486

[Close]
BLAST of IVF0001477 vs. ExPASy TrEMBL
Match: A0A5A7THF3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00140 PE=4 SV=1)

HSP 1 Score: 2468.0 bits (6395), Expect = 0.0e+00
Identity = 1260/1411 (89.30%), Postives = 1297/1411 (91.92%), Query Frame = 0 

Query: 1    MEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL 60
            MEQRFRD+IMQM EQQKPASPT APAPAPAPAP PAPAPAPVPVAPQFVPDQLSAEAKHL
Sbjct: 203  MEQRFRDLIMQMWEQQKPASPTLAPAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHL 262

Query: 61   RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 120
            RDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET
Sbjct: 263  RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 322

Query: 121  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
            TERMLGGDVSQITWQQFKESFYAKFFS SLRDAK+QEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 323  TERMLGGDVSQITWQQFKESFYAKFFSVSLRDAKQQEFLNLEQGDMTVEQYDAEFDMLSR 382

Query: 181  FAPEMIATRRPELTSLLEASD---------WTFRVWSELSDPLLMPMHCAWQWIS--VYR 240
            FAPEMIAT      +L E ++          + +       P+ +P    W + S   +R
Sbjct: 383  FAPEMIATEAARADNLQERANSSKTAGRGSTSGQKSKAEQQPVPVPQ---WNFRSGGEFR 442

Query: 241  R---------GPTRLRPLVEVRRRDRRGRLSSSLFNTTAEFQTRWTCFKCRQEGHTADRC 300
            R            R +PL     +   GR           F+TR TCFKCRQEGHTADRC
Sbjct: 443  RFQQKPFEAGEAARGKPLCTTCGKHHLGR---------CLFETR-TCFKCRQEGHTADRC 502

Query: 301  PLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFI 360
            PLR+T  AQNQGAGAPHQG+VFATN+TE EKAGTVVTGTLPVLGHYALVLFDSGSSHSFI
Sbjct: 503  PLRLTENAQNQGAGAPHQGKVFATNKTEVEKAGTVVTGTLPVLGHYALVLFDSGSSHSFI 562

Query: 361  SSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIELAGHVIEVTLIVLDMLDFD 420
            SSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIE+AGHV+EVTLIVLDMLDFD
Sbjct: 563  SSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVVEVTLIVLDMLDFD 622

Query: 421  VILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTW 480
            VILGMDWLAANHASIDCS K VTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTW
Sbjct: 623  VILGMDWLAANHASIDCSHKGVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTW 682

Query: 481  GILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPY 540
            GILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGL PHREVEFAIELEPGTVPISRAPY
Sbjct: 683  GILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLSPHREVEFAIELEPGTVPISRAPY 742

Query: 541  RMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN 600
            RMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN
Sbjct: 743  RMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN 802

Query: 601  RYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGL 660
            RYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGL
Sbjct: 803  RYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGL 862

Query: 661  TNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKF 720
            TNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMV             
Sbjct: 863  TNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMV------------- 922

Query: 721  SKCEFWLKQAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQ 780
            S     + +AGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQ
Sbjct: 923  SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQ 982

Query: 781  LTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTQGKVVAYASRQLKSHEQNYPTHDLELAA 840
            LTRKGAPFVWSKACEDSFQ LKQKLVTA   +QGKVVAYASRQLKSHEQNYPTHDLELAA
Sbjct: 983  LTRKGAPFVWSKACEDSFQNLKQKLVTA---SQGKVVAYASRQLKSHEQNYPTHDLELAA 1042

Query: 841  VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKA 900
            VVFALKIWRHYLYGEKIQIF DHK+LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKA
Sbjct: 1043 VVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKA 1102

Query: 901  NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 960
            NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDA
Sbjct: 1103 NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDA 1162

Query: 961  QSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGRLCVPSDGVIKTELLSEAHSSPFSMH 1020
            QSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFE RLCVP D  +KTELLSEAHSSPFSMH
Sbjct: 1163 QSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKTELLSEAHSSPFSMH 1222

Query: 1021 PGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV 1080
            PGSTKMYQDLKRVYWWRNMKR+VAEFVS+CLVCQQVKAPRQKPAGLLQPLSIP+WKWENV
Sbjct: 1223 PGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENV 1282

Query: 1081 SMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVS 1140
            SMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVS
Sbjct: 1283 SMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVS 1342

Query: 1141 IVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGS 1200
            IVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGS
Sbjct: 1343 IVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGS 1402

Query: 1201 WDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAI 1260
            WDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAI
Sbjct: 1403 WDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAI 1462

Query: 1261 QKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPF 1320
            QKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GVLRFERR KLSPRFVGPF
Sbjct: 1463 QKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERREKLSPRFVGPF 1522

Query: 1321 EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVERPV 1380
            EILERIGPVAYRLALPPSLS VHDVFH+SMLRKYVPDPSHVVDYEPLEIDENLSY E+PV
Sbjct: 1523 EILERIGPVAYRLALPPSLSTVHDVFHISMLRKYVPDPSHVVDYEPLEIDENLSYTEQPV 1582

Query: 1381 EVLAREVKTLRNKQIPLVKVLWRNHRVEEAT 1392
            EVLAREVKTLRNK+IPLVKVLWRNHRVEEAT
Sbjct: 1583 EVLAREVKTLRNKEIPLVKVLWRNHRVEEAT 1584

[Close]
BLAST of IVF0001477 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 2439.5 bits (6321), Expect = 0.0e+00
Identity = 1265/1449 (87.30%), Postives = 1298/1449 (89.58%), Query Frame = 0 

Query: 1    MEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL 60
            MEQRFRD+IMQMREQQKPASPTPAPAPAPAPAP PAPAPAPVPVAPQFVPDQLSAEAKHL
Sbjct: 47   MEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHL 106

Query: 61   RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 120
            RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET
Sbjct: 107  RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 166

Query: 121  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
            TERML GDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGD+TVEQYDAEFDMLSR
Sbjct: 167  TERMLSGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDVTVEQYDAEFDMLSR 226

Query: 181  FAPEMIATR-----------RPELTSLLEASDWTFRVWSELSDPLLMPMHCAWQWISVYR 240
            FAPEMIAT            R ++  L+ A    FR  +  +D L + +  + Q  +   
Sbjct: 227  FAPEMIATEAARADKFVRGLRLDIQGLVRA----FRPATH-ADALRLAVDLSLQERANSS 286

Query: 241  RGPTRLRPLVEVRRRDRRG-RLSSSLFNTTAEFQTRWTCFKCRQ----EGHTADRCPLRV 300
            +   R     + R+ +++   +    F +  EF++ +     RQ     G  +DRCPLR+
Sbjct: 287  KTAGRGSTSGQKRKAEQQPVPVPKRNFRSGGEFRS-FQQKPLRQGRLPGGSRSDRCPLRL 346

Query: 301  TGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF 360
            TG AQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF
Sbjct: 347  TGNAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF 406

Query: 361  VSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIELAGHVIEVTLIVLDMLDFDVILG 420
            V HARLEVEPLHHVLSVSTPSGEC+LS+EKVKACQIE+AGHVIEVTLIVLDMLDFDVILG
Sbjct: 407  VLHARLEVEPLHHVLSVSTPSGECLLSREKVKACQIEIAGHVIEVTLIVLDMLDFDVILG 466

Query: 421  MDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILA 480
            MDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILA
Sbjct: 467  MDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILA 526

Query: 481  SVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP 540
            SVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP
Sbjct: 527  SVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP 586

Query: 541  AELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL 600
            AELKEL                            KKDGSMRLCIDYRELNKVTVKNRYPL
Sbjct: 587  AELKEL----------------------------KKDGSMRLCIDYRELNKVTVKNRYPL 646

Query: 601  PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAP 660
            PRIDDLFDQLQGA VFSK DLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNAP
Sbjct: 647  PRIDDLFDQLQGAIVFSKFDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAP 706

Query: 661  AVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCE 720
            AVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHLRMV             S   
Sbjct: 707  AVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRMV-------------SFLG 766

Query: 721  FWLKQAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK 780
              + +AGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK
Sbjct: 767  HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK 826

Query: 781  GAPFVWSKACEDSFQTLKQKLVTAPVLT-------------------------QGKVVAY 840
            GAPFVWSKACEDSFQ LKQKLVTAPVLT                         QGKVVAY
Sbjct: 827  GAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAY 886

Query: 841  ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ 900
            ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ
Sbjct: 887  ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ 946

Query: 901  RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA 960
            RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA
Sbjct: 947  RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA 1006

Query: 961  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGRLCVP 1020
            VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE RLCVP
Sbjct: 1007 VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVP 1066

Query: 1021 SDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAP 1080
            SD  +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAP
Sbjct: 1067 SDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAP 1126

Query: 1081 RQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT 1140
            RQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT
Sbjct: 1127 RQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT 1186

Query: 1141 ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT 1200
            ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT
Sbjct: 1187 ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT 1246

Query: 1201 ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCW 1260
            ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCW
Sbjct: 1247 ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCW 1306

Query: 1261 GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAP 1320
            GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAP
Sbjct: 1307 GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAP 1366

Query: 1321 MKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPS 1380
            MKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS VHDVFHVSMLRKYVPDPS
Sbjct: 1367 MKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPS 1426

Query: 1381 HVVDYEPLEIDENLSYVERPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMR 1409
            HVVDYEPLEIDENLSYVE+PVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMR
Sbjct: 1427 HVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMR 1448

[Close]
BLAST of IVF0001477 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2535 bits (6570), Expect = 0.0
Identity = 1311/1473 (89.00%), Postives = 1336/1473 (90.70%), Query Frame = 0 

Query: 16   QKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSL 75
            +KPASPTPAPAPAPAPAPVPAPAPA VPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSL
Sbjct: 25   EKPASPTPAPAPAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSL 84

Query: 76   EDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQ 135
            EDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQ
Sbjct: 85   EDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQ 144

Query: 136  QFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATR------ 195
            QFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIAT       
Sbjct: 145  QFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADK 204

Query: 196  -----RPELTSLLEASDWTFRVWSELSDPLLMPMHCAWQWIS----VYRRGPT------- 255
                 R ++  L+ A    FR  +  +D L + +  + Q ++       RG T       
Sbjct: 205  FVRGLRLDIQGLVRA----FRPATH-ADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKA 264

Query: 256  RLRPLVEVRRRDRRGRLSSSLFNTTAE-----------------------FQTRWTCFKC 315
              +P+   +R  R G    S      E                       F TR TCFKC
Sbjct: 265  EQQPVPVPQRNFRSGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTR-TCFKC 324

Query: 316  RQEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL 375
            RQEGHTADRCPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL
Sbjct: 325  RQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL 384

Query: 376  FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIELAGHVIEVT 435
            FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLS+EKVKACQIE+AGHVIEVT
Sbjct: 385  FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVT 444

Query: 436  LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIR 495
            LIVLDMLDFDVILGMDWLAANHASIDCSRK+VTFNPPSMASFKFKGGGSKSLPQVISAIR
Sbjct: 445  LIVLDMLDFDVILGMDWLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIR 504

Query: 496  ASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEP 555
            ASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEP
Sbjct: 505  ASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEP 564

Query: 556  GTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY 615
            GTVPISRAPYRMAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDY
Sbjct: 565  GTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDY 624

Query: 616  RELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGH 675
            RELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDED+PKTAFRSRYGH
Sbjct: 625  RELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGH 684

Query: 676  YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT 735
            YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT
Sbjct: 685  YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT 744

Query: 736  LRDNKLYAKFSKCEFWLKQ----------AGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL 795
            LRDNKLYAKFSKCEFWLKQ          A VSVDPAKIEAVTGWTRPSTVSEVRSFLGL
Sbjct: 745  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGL 804

Query: 796  AGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLT-------- 855
            AGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLT        
Sbjct: 805  AGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF 864

Query: 856  -----------------QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE 915
                             QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE
Sbjct: 865  VIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE 924

Query: 916  KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSA 975
            KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSA
Sbjct: 925  KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSA 984

Query: 976  ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE 1035
            ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE
Sbjct: 985  ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE 1044

Query: 1036 AGQTAEFSLSSDGGLLFEGRLCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 1095
            AGQ  EFSLSSDGGL FEGRLCVPSD  +KTELL EAHSSPFSMHPGSTKMYQDLKRVYW
Sbjct: 1045 AGQAVEFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYW 1104

Query: 1096 WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF 1155
            WRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
Sbjct: 1105 WRNMKREVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF 1164

Query: 1156 TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 1215
            TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK
Sbjct: 1165 TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 1224

Query: 1216 GLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS 1275
            GLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS
Sbjct: 1225 GLQTAMGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS 1284

Query: 1276 YQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK 1335
            YQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
Sbjct: 1285 YQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK 1344

Query: 1336 SYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL 1395
            SYADVRRKDLEFEI DKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
Sbjct: 1345 SYADVRRKDLEFEIRDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL 1404

Query: 1396 PPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVERPVEVLAREVKTLRNKQI 1408
            PPSLS VHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVE+PVEVLAREVKTLRNK+I
Sbjct: 1405 PPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEI 1464

[Close]
BLAST of IVF0001477 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2476 bits (6417), Expect = 0.0
Identity = 1282/1486 (86.27%), Postives = 1318/1486 (88.69%), Query Frame = 0 

Query: 1    MEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL 60
            MEQRFRD+IMQMREQQKPASPTPAPAPAPAPAP PAPA APVPVAPQFVPDQLSAEAKHL
Sbjct: 47   MEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHL 106

Query: 61   RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 120
            RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET
Sbjct: 107  RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 166

Query: 121  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
            TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 167  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 226

Query: 181  FAPEMIATR-----------RPELTSLLEASDWTFRVWSELSDPLLMPMHCAWQ------ 240
            FAPEMIAT            R ++  L+ A    FR  +  +D L + +  + Q      
Sbjct: 227  FAPEMIATEAARADKFVRGLRLDIQGLVRA----FRPATH-ADALRLAVDLSLQERANSS 286

Query: 241  -----WISVYRRGPTRLRPLVEVRRRDRRG----RLSSSLFNTTAEFQTRW--------- 300
                  ++  ++     +P+   +R  R G    R     F   A    RW         
Sbjct: 287  KTAGRGLTSGQKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFE--AGEAARWKPLCTICGK 346

Query: 301  -----------TCFKCRQEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGT 360
                       TCFKCRQEGHTADRCPLR+TG AQNQGAGAPHQGRVFATN+TEAEKAGT
Sbjct: 347  HHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGT 406

Query: 361  VVTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEK 420
            VVTGTLPVLGHYALVLFDS                           VSTPSGECMLSKEK
Sbjct: 407  VVTGTLPVLGHYALVLFDS---------------------------VSTPSGECMLSKEK 466

Query: 421  VKACQIELAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKF 480
            VK CQIE+AGHVIEVTL+VLDMLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKF
Sbjct: 467  VKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKF 526

Query: 481  KGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELP 540
            KGGGS+SLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELP
Sbjct: 527  KGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELP 586

Query: 541  GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPV 600
            GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPV
Sbjct: 587  GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPV 646

Query: 601  LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI 660
            LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
Sbjct: 647  LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI 706

Query: 661  KDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYS 720
            KDED+PKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYS
Sbjct: 707  KDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYS 766

Query: 721  KTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQ----------AGVSVDPAKIEAVTG 780
            KTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQ          AGVSVDPAKIEAVTG
Sbjct: 767  KTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTG 826

Query: 781  WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQK 840
            WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQK
Sbjct: 827  WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQK 886

Query: 841  LVTAPVLT-------------------------QGKVVAYASRQLKSHEQNYPTHDLELA 900
            LVTAPVLT                         QGKVVAYASRQLKSHEQNYPTHDLELA
Sbjct: 887  LVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA 946

Query: 901  AVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 960
            AVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 947  AVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 1006

Query: 961  ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID 1020
            ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID
Sbjct: 1007 ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID 1066

Query: 1021 AQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGRLCVPSDGVIKTELLSEAHSSPFSM 1080
            AQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFE RLCVPSD V+KTELLSEAHSSPFSM
Sbjct: 1067 AQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSM 1126

Query: 1081 HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1140
            HPGSTKMY+D+KRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
Sbjct: 1127 HPGSTKMYRDVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1186

Query: 1141 VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 1200
            VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV
Sbjct: 1187 VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 1246

Query: 1201 SIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1260
            SIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPG
Sbjct: 1247 SIVSDRDARFTSKFWKSLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPG 1306

Query: 1261 SWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEA 1320
            SWDSHLHLMEF YNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEA
Sbjct: 1307 SWDSHLHLMEFVYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEA 1366

Query: 1321 IQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGP 1380
            IQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRF+GP
Sbjct: 1367 IQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFIGP 1426

Query: 1381 FEILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVERP 1405
            FEILERIGPVAYRLALPPSLS VHDVFHVSMLRKYVPDPSHVVDY+PL+IDENLSY E+P
Sbjct: 1427 FEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYKPLKIDENLSYTEQP 1486

[Close]
BLAST of IVF0001477 vs. NCBI nr
Match: KAA0066456.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2467 bits (6395), Expect = 0.0
Identity = 1286/1487 (86.48%), Postives = 1313/1487 (88.30%), Query Frame = 0 

Query: 1    MEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL 60
            MEQRFRDMIMQMREQQKP SP PAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL
Sbjct: 47   MEQRFRDMIMQMREQQKPVSPNPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL 106

Query: 61   RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 120
            RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET
Sbjct: 107  RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 166

Query: 121  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
            TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 167  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 226

Query: 181  FAPEMIATR-----------RPELTSLLEASDWTFRVWSELSDPLLMPMHCAWQWIS--- 240
            FAPEMIAT            R ++  L+ A    FR  + + D L + +  + Q  +   
Sbjct: 227  FAPEMIATEAARADKFVRGLRLDIQGLVRA----FRPATHV-DALRLAVDLSLQERANSS 286

Query: 241  -VYRRGPT-------RLRPLVEVRRRDRRG----------------RLSSSLFNTTAE-- 300
                RG T         +P+   +R  R G                     L  T  +  
Sbjct: 287  KTAGRGSTSGQKRKAEQQPVPVPQRNFRSGGEFRYFQQKPFEAGEAARGKPLCTTCGKHH 346

Query: 301  -----FQTRWTCFKCRQEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV 360
                 F TR TCFKCRQEGHTADRCPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGT+
Sbjct: 347  LGRCLFGTR-TCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTI 406

Query: 361  VTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKV 420
            VTGTLPVLGHYALVLF SGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKV
Sbjct: 407  VTGTLPVLGHYALVLFYSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKV 466

Query: 421  KACQIELAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK 480
            KACQIE+AGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK
Sbjct: 467  KACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK 526

Query: 481  GGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG 540
            GGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Sbjct: 527  GGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG 586

Query: 541  LPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 600
            LPPHREVEFAIELE GTVPISRAPYRMAPAELK+LKVQLQELLDKG              
Sbjct: 587  LPPHREVEFAIELESGTVPISRAPYRMAPAELKDLKVQLQELLDKG-------------- 646

Query: 601  FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK 660
                            ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK
Sbjct: 647  ----------------ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK 706

Query: 661  DEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK 720
            DED+PKT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK
Sbjct: 707  DEDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK 766

Query: 721  TEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQ----------AGVSVDPAKIEAVTGW 780
            TEAEHEEHLRMVLQTLRD KLYAKFSKCEFWLKQ          AGVSVDPAKIEAVTGW
Sbjct: 767  TEAEHEEHLRMVLQTLRDYKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW 826

Query: 781  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKL 840
            TRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKL
Sbjct: 827  TRPSTVSEVRSFLGLVGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKL 886

Query: 841  VTAPVLT-------------------------QGKVVAYASRQLKSHEQNYPTHDLELAA 900
            VTAPVLT                         QGKVVAYASRQLKSHEQNYPTHDLELAA
Sbjct: 887  VTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA 946

Query: 901  VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKA 960
            VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKA
Sbjct: 947  VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKA 1006

Query: 961  NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 1020
            NVVADALSRKVSHS ALITRQAPLHRDLERAEIAVS+GAVTMQLA+L VQPTLRQRIIDA
Sbjct: 1007 NVVADALSRKVSHSVALITRQAPLHRDLERAEIAVSMGAVTMQLARLAVQPTLRQRIIDA 1066

Query: 1021 QSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGRLCVPSDGVIKTELLSEAHSSPFSMH 1080
            Q NDPYLVEKRGL EAGQTAEFSLSSDGGLLFE RLCVPSD  +K ELLSEAHSSPFSMH
Sbjct: 1067 QGNDPYLVEKRGLVEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKIELLSEAHSSPFSMH 1126

Query: 1081 PGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV 1140
            PGSTK+YQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV
Sbjct: 1127 PGSTKIYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV 1186

Query: 1141 SMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVS 1200
            SMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVS
Sbjct: 1187 SMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVS 1246

Query: 1201 IVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGS 1260
            IVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGS
Sbjct: 1247 IVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGS 1306

Query: 1261 WDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAI 1320
            WDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAI
Sbjct: 1307 WDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAI 1366

Query: 1321 QKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPF 1380
            QKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPRFVGPF
Sbjct: 1367 QKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPF 1426

Query: 1381 EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVERPV 1407
            EILERIGPVAYRLALPPSLS VHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY ERPV
Sbjct: 1427 EILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTERPV 1486

[Close]
BLAST of IVF0001477 vs. NCBI nr
Match: KAA0040699.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2459 bits (6373), Expect = 0.0
Identity = 1259/1417 (88.85%), Postives = 1290/1417 (91.04%), Query Frame = 0 

Query: 1    MEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL 60
            MEQRFRD+IMQM EQQKPASPT APAPAPAPAP PAPAPAPVPVAPQFVPDQLSAEAKHL
Sbjct: 203  MEQRFRDLIMQMWEQQKPASPTLAPAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHL 262

Query: 61   RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 120
            RDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET
Sbjct: 263  RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 322

Query: 121  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
            TERMLGGDVSQITWQQFKESFYAKFFS SLRDAK+QEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 323  TERMLGGDVSQITWQQFKESFYAKFFSVSLRDAKQQEFLNLEQGDMTVEQYDAEFDMLSR 382

Query: 181  FAPEMIATRRPELTSLLEASD--------------------------WTFRVWSELSDPL 240
            FAPEMIAT      +L E ++                          W FR   E     
Sbjct: 383  FAPEMIATEAARADNLQERANSSKTAGRGSTSGQKSKAEQQPVPVPQWNFRSGGEFRRFQ 442

Query: 241  LMPMHCAWQWISVYRRGPTRLRPLVEVRRRDRRGRLSSSLFNTTAEFQTRWTCFKCRQEG 300
              P                R +PL     +   GR           F+TR TCFKCRQEG
Sbjct: 443  QKPFEAG---------EAARGKPLCTTCGKHHLGRCL---------FETR-TCFKCRQEG 502

Query: 301  HTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSG 360
            HTADRCPLR+T  AQNQGAGAPHQG+VFATN+TE EKAGTVVTGTLPVLGHYALVLFDSG
Sbjct: 503  HTADRCPLRLTENAQNQGAGAPHQGKVFATNKTEVEKAGTVVTGTLPVLGHYALVLFDSG 562

Query: 361  SSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIELAGHVIEVTLIVL 420
            SSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIE+AGHV+EVTLIVL
Sbjct: 563  SSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVVEVTLIVL 622

Query: 421  DMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKL 480
            DMLDFDVILGMDWLAANHASIDCS K VTFNPPSMASFKFKGGGSKSLPQVISAIRASKL
Sbjct: 623  DMLDFDVILGMDWLAANHASIDCSHKGVTFNPPSMASFKFKGGGSKSLPQVISAIRASKL 682

Query: 481  LSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVP 540
            LSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGL PHREVEFAIELEPGTVP
Sbjct: 683  LSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLSPHREVEFAIELEPGTVP 742

Query: 541  ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELN 600
            ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELN
Sbjct: 743  ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELN 802

Query: 601  KVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFI 660
            KVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFI
Sbjct: 803  KVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFI 862

Query: 661  VMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDN 720
            VMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMV       
Sbjct: 863  VMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMV------- 922

Query: 721  KLYAKFSKCEFWLKQAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI 780
                  S     + +AGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI
Sbjct: 923  ------SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI 982

Query: 781  ATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTQGKVVAYASRQLKSHEQNYPTH 840
            ATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTA   +QGKVVAYASRQLKSHEQNYPTH
Sbjct: 983  ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA---SQGKVVAYASRQLKSHEQNYPTH 1042

Query: 841  DLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEIL 900
            DLELAAVVFALKIWRHYLYGEKIQIF DHK+LKYFFTQKELNMRQRRWLELVKDYDCEIL
Sbjct: 1043 DLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEIL 1102

Query: 901  YHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR 960
            YHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLR
Sbjct: 1103 YHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLR 1162

Query: 961  QRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGRLCVPSDGVIKTELLSEAHS 1020
            QRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFE RLCVP D  +KTELLSEAHS
Sbjct: 1163 QRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKTELLSEAHS 1222

Query: 1021 SPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPE 1080
            SPFSMHPGSTKMYQDLKRVYWWRNMKR+VAEFVS+CLVCQQVKAPRQKPAGLLQPLSIP+
Sbjct: 1223 SPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPK 1282

Query: 1081 WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRL 1140
            WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRL
Sbjct: 1283 WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRL 1342

Query: 1141 HGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACA 1200
            HGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTDGQTERLNQVLEDMLRACA
Sbjct: 1343 HGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACA 1402

Query: 1201 LEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQ 1260
            LEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQ
Sbjct: 1403 LEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQ 1462

Query: 1261 STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSP 1320
            STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GVLRFERR KLSP
Sbjct: 1463 STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERREKLSP 1522

Query: 1321 RFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLS 1380
            RFVGPFEILERIGPVAYRLALPPSLS VHDVFH+SMLRKYVPDPSHVVDYEPLEIDENLS
Sbjct: 1523 RFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRKYVPDPSHVVDYEPLEIDENLS 1582

Query: 1381 YVERPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEAT 1391
            Y E+PVEVLAREVKTLRNK+IPLVKVLWRNHRVEEAT
Sbjct: 1583 YTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEAT 1584

[Close]
BLAST of IVF0001477 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2429 bits (6294), Expect = 0.0
Identity = 1265/1449 (87.30%), Postives = 1298/1449 (89.58%), Query Frame = 0 

Query: 1    MEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHL 60
            MEQRFRD+IMQMREQQKPASPTPAPAPAPAPAP PAPAPAPVPVAPQFVPDQLSAEAKHL
Sbjct: 47   MEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHL 106

Query: 61   RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 120
            RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET
Sbjct: 107  RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 166

Query: 121  TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
            TERML GDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGD+TVEQYDAEFDMLSR
Sbjct: 167  TERMLSGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDVTVEQYDAEFDMLSR 226

Query: 181  FAPEMIATR-----------RPELTSLLEASDWTFRVWSELSDPLLMPMHCAWQWISVYR 240
            FAPEMIAT            R ++  L+ A    FR  +  +D L + +  + Q  +   
Sbjct: 227  FAPEMIATEAARADKFVRGLRLDIQGLVRA----FRPATH-ADALRLAVDLSLQERANSS 286

Query: 241  RGPTRLRPLVEVRRRDRRG-RLSSSLFNTTAEFQTRWTCFKCRQE----GHTADRCPLRV 300
            +   R     + R+ +++   +    F +  EF++ +     RQ     G  +DRCPLR+
Sbjct: 287  KTAGRGSTSGQKRKAEQQPVPVPKRNFRSGGEFRS-FQQKPLRQGRLPGGSRSDRCPLRL 346

Query: 301  TGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF 360
            TG AQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF
Sbjct: 347  TGNAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF 406

Query: 361  VSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIELAGHVIEVTLIVLDMLDFDVILG 420
            V HARLEVEPLHHVLSVSTPSGEC+LS+EKVKACQIE+AGHVIEVTLIVLDMLDFDVILG
Sbjct: 407  VLHARLEVEPLHHVLSVSTPSGECLLSREKVKACQIEIAGHVIEVTLIVLDMLDFDVILG 466

Query: 421  MDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILA 480
            MDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILA
Sbjct: 467  MDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILA 526

Query: 481  SVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP 540
            SVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP
Sbjct: 527  SVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP 586

Query: 541  AELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL 600
            AELKELK                            KDGSMRLCIDYRELNKVTVKNRYPL
Sbjct: 587  AELKELK----------------------------KDGSMRLCIDYRELNKVTVKNRYPL 646

Query: 601  PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAP 660
            PRIDDLFDQLQGA VFSK DLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNAP
Sbjct: 647  PRIDDLFDQLQGAIVFSKFDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAP 706

Query: 661  AVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCE 720
            AVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHLRMV             S   
Sbjct: 707  AVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRMV-------------SFLG 766

Query: 721  FWLKQAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK 780
              + +AGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK
Sbjct: 767  HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK 826

Query: 781  GAPFVWSKACEDSFQTLKQKLVTAPVLT-------------------------QGKVVAY 840
            GAPFVWSKACEDSFQ LKQKLVTAPVLT                         QGKVVAY
Sbjct: 827  GAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAY 886

Query: 841  ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ 900
            ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ
Sbjct: 887  ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ 946

Query: 901  RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA 960
            RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA
Sbjct: 947  RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA 1006

Query: 961  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFEGRLCVP 1020
            VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE RLCVP
Sbjct: 1007 VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVP 1066

Query: 1021 SDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAP 1080
            SD  +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAP
Sbjct: 1067 SDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAP 1126

Query: 1081 RQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT 1140
            RQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT
Sbjct: 1127 RQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT 1186

Query: 1141 ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT 1200
            ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT
Sbjct: 1187 ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT 1246

Query: 1201 ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCW 1260
            ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCW
Sbjct: 1247 ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCW 1306

Query: 1261 GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAP 1320
            GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAP
Sbjct: 1307 GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAP 1366

Query: 1321 MKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPS 1380
            MKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS VHDVFHVSMLRKYVPDPS
Sbjct: 1367 MKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPS 1426

Query: 1381 HVVDYEPLEIDENLSYVERPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMR 1408
            HVVDYEPLEIDENLSYVE+PVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMR
Sbjct: 1427 HVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMR 1448

[Close]
BLAST of IVF0001477 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20
Identity = 52/121 (42.98%), Postives = 69/121 (57.02%), Query Frame = 0 

Query: 683 HLRMVLQTLRDNKLYAKFSKCEFWLKQ------------AGVSVDPAKIEAVTGWTRPST 742
           HL MVLQ    ++ YA   KC F   Q             GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 743 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPV 792
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

The following BLAST results are available for this feature:
BLAST of IVF0001477 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0CT416.8e-13232.03Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT346.8e-13232.03Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT356.8e-13232.03Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT366.8e-13232.03Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT376.8e-13232.03Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of IVF0001477 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UAA80.0e+0088.88Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... [more]
A0A5A7U3300.0e+0086.40Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
A0A5A7VJE20.0e+0086.42Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21... [more]
A0A5A7THF30.0e+0089.30Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52... [more]
A0A5A7U7V90.0e+0087.30Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... [more]
BLAST of IVF0001477 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0051357.10.089.00pol protein [Cucumis melo var. makuwa][more]
KAA0048687.10.086.27pol protein [Cucumis melo var. makuwa][more]
KAA0066456.10.086.48pol protein [Cucumis melo var. makuwa][more]
KAA0040699.10.088.85pol protein [Cucumis melo var. makuwa][more]
KAA0051368.10.087.30pol protein [Cucumis melo var. makuwa][more]
BLAST of IVF0001477 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.11.5e-2042.98DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 557..714
e-value: 4.6E-27
score: 95.0
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 538..742
score: 10.413042
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 105..184
e-value: 3.7E-11
score: 43.1
NoneNo IPR availablePFAMPF08284RVP_2coord: 298..426
e-value: 4.3E-42
score: 143.1
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 503..642
e-value: 1.8E-89
score: 300.7
NoneNo IPR availableGENE3D1.10.340.70coord: 947..1037
e-value: 4.6E-17
score: 64.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..39
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 67..186
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 267..633
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 711..792
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 67..186
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 795..895
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 267..633
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 795..895
coord: 711..792
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 344..409
e-value: 7.55729E-12
score: 60.8132
NoneNo IPR availableCDDcd01647RT_LTRcoord: 541..710
e-value: 7.75729E-89
score: 283.717
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 790..891
e-value: 2.7078E-50
score: 171.522
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1047..1254
e-value: 2.2E-46
score: 159.7
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 985..1038
e-value: 1.8E-16
score: 60.0
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 582..709
e-value: 1.8E-89
score: 300.7
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 717..805
e-value: 8.3E-30
score: 104.6
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 787..869
e-value: 1.0E-26
score: 93.3
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 303..433
e-value: 1.5E-22
score: 81.7
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 320..416
IPR001969Aspartic peptidase, active sitePROSITEPS00141ASP_PROTEASEcoord: 329..340
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1049..1212
score: 18.918982
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 267..281
score: 9.438442
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1050..1208
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 481..875
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 264..287

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001477.1IVF0001477.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding