IVF0001399 (gene) Melon (IVF77) v1

Overview


Name	IVF0001399
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DNA-directed RNA polymerases I and III subunit RPAC1
Location	chr06: 23191420 .. 23211575 (-)
RNA-Seq Expression	IVF0001399
Synteny	IVF0001399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTATTTCCCATGACTATTTCTTAAACCCTCCCTCCTCCCCTCCCGCGTCTAAAACCTCCTCAGCCGTGCTGCTGAGTGCCGTTGCCGCCGTCTTTCTCGATTTTCCTTATCCGCCGGATATTTCTTCCTTGTTTTGGTCTCAGGTATTCTCACTGTTCGTAACTTTTCCCTACAAAATTCTGTTTTGGATCTCTCTATTTCTAATTGTTGTTCTTATTCCCTTCGAAGCAAGTTTCTTAAAGTCCTAATTGACCCTTATCTGTCGGATTTTGCTCCCACCGCCTTATTTAAAGTTACAGCCGACCCACTGACTAAATAACTGTGCGCACACTGAATCGGAAGTTGACAATGTCCGGCAAAGATAAGAATTTGCATAATATGATGACGGAGTCGGAATCCGAACAAGAAGATGTTGGAAAAGAAGGCATTGAGTGGATAATGAATCTTCCAGACGTGCCCATGAAGCTCCCACCACATGTTGAATTGCAGAGAACTCGAGTCGAATGCAAAGCCGATGCTCCCATTCATGTACTCTTCGTTTCCATTTCCCATTATTTGGTTATTCAAATTCTAAGAATGGGAAATATCCTTTTTAGCATGTTTACTGTAGTTTTATGTTTAATGTGAATTTATTAAATTACGTTTCATGCTTCTGGAGGGAAGTGAATTTAATGGAATCTGTTTACTTTACTTGATTTTTATTCATAGTACGTGTACTTACTATTTCTCATGTTGTAATTAGCTTACTTTAGTTTTCTTCTCATGGTCCTTGTGGAAAACGTGGACTTCTGTAGACAGATACCATACAGTATTCTGGAGCATTTGCTTCCATGGGCTTTGATAACAGTTTACGTCTGGATAATTTTCGCAACAACTTTAAAATTGAAGTTATTAATCTGAAAGGGGATGACATTGAGTTTGACATGATTGGCATTGATCCAGCACTTGCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTAGGTAATCTAGCAGAATGAATTGAAACTATAATAATTGATTATTTTAGTGAGATTTCACTGAGTTCTTGGTGTTTACTTCCTTGCCACTACTTCTGGTGTTGTTATGTGTGCCCAATATACAAAAATGCTTGAGATTTTGCCCAAGCTGCAAGCTCTTAGCTTTCTTTGCTTCACATAGAGCTTGTGCTTCGTAGGGAAAAAATGTATGCTTTCAATGTCAATGTAAGAATGTTTGGAGTCTTTATGGCTTATGAAATGGTTATAAGAACTACGATGGTTGTTTTCTATTGTTCAAAAATTGGAAGTTTGTTCATGTATTAAAAGCTAATAAAATGGGGATATTGATGGTTATGGCTTTGGTTGTTTTAGAGTTTTTCTTGTCAGACATGGCCCAGGGTGCCCATACTTTGGTTAAAATGAAAAAGAAATCTGTTGTAATTGCCTATTATTTCTTTTTCTACTATGGCTTAAAGAAACACTACTGACGTGACAAACACATTAGGAATAAAGACAACCCCCTGTTAACTATAATGCTGATTATATTGAGAATGTCTTTCAGAATCTTTAGATGTGAAAACTGACGGTTCAAACTTTTTTTCTTGAACATTAGAAATATCAATTCTCAGTTGTTTACATAGAGGGTGAGACTGAGAGTGAGTAGATATGACCCTCATACATTTGTTTGGAGTGCAAGCAGTGGTAGATCCAAAAGTTTTGTCGACGGGGGAGTTTTAGTTTAGTAAAAATAATCCGAAAAAAATGTAAGGAATGGAGCTTGAATCAGGGTCTAGAGGGGGCCGGGTGATAGTTTTATCATTGGACTAGCTACTAGAATTGGTATAATTATAGTTTTCTATATATATTATAAATAGCATAAAATTGACGAGGGGCTCAAGGCCCCTTTGGGCCTATATTAAATCCACCGGTGGGTGCAAGTGGGTGGCCCAAGAGGCCTTTGCAAAATCTTCTATGAAGCTATCCTCTTTGTTTTCCATTATTCTCTCAGTTTATCACTTACTTTGATGGTGAAGGTTTGAAGGTTTATTTTTGGGAGGATTGCTAAAGGGATTTGAACCTCTTTGTGCTTTGTTTTGGAGGTAATATATATAGTCTTTCAAATAAGAGGTTGCATTATGTGGCCTTAGTGTTGCTTTCAATAGACCCTTCTTCTTCGATTCCTGTAGGGTTCTAGTGTCCTTAGCATGATAGGGGTACAATGAAATTAGCTGATCTTTTTTCTCTTCTTTGAAACCAGTGTGTCATTCCAAGGAGAAGTATTGAAAGCAATTAACAACAACCCGAGACTTACGTGGAAACCCGAGAACCGGGAGAAAAACCACGATACTTTAGTTTTTATTATTTTTCTTATGAACAAAATACAATAGGTACAAAGGGAGAATAAATAGAGTACAGTAGGAATAAGAAAGGAAAAGATCTAGGAAATATTTAGGAAATAAAATCTTATATTTTATTCTTTCCAAAAGTACTCTAGGGCAAAGCCCTACTAATTCTAACACTCCCTCTCAAGTTGGGAGGTAAATATCAATGAGTCCCAACTTGCTAACGCAAAGGTCGAAGTGTGGTCTGAGAAGCCCCTTGGTAAGAACATCAGCAATCTGTTGGCTTGAAGGAATGTACGGAATGCATATGCTTCCACTGTCAAGTCTTTCTTTGATGAAATGCCGATCAATCTCAACATGTTTAGTTCTATCATGTTGAACTGGGTTGTTAGCAATACTAATAGTGACTTTATTATCACAAAAAAGCTTCAATGGTGTCTCACATTCCTGATGAAGATCAGACAAGACTTTCTGGAGCCAAATTTCCTCACATATTCCCAGACTCATAGCGCTGTATTCAGCCTTAGCACTGCTCCTGGTCACAACACTTTGCTTCTTACTCCTCCAAGTTACAAGATTGCCCCAAACAAAGGTACAATAACCGGAGGTAGACTTTCTATCAATAACAGATCTTGCCCAATCTGAGTCAGTATATGCCTCAATGGTCTTTCTATTTGTTTTTCTAAACATCAACCCTTACCAGGTGTATTTTTCAAGTATCTCAGGATTCTGTTAACAGCTTCCATATGTTTCTCATAGGGAGTCTGCATAAACTGGCTGACAACACTCATAGCAAAGGAAATATCAGGACGAGTATGGGATAAGTAAATTAATTTACCTACAAGGCGTTGTTCTTTATCAACTGGAACTTGATCATCAGAGTTTCCTAGTTTACAGTTGAATTCAATAGGAGTATCAGCAGGACGACATCCCAACATACCTGTCTCGGTTAGCAAATCAAGGGTGTATTTTCTCTGAGACACGGAAATACCTTTTTTTGATCTAGCCACTTCCATTCCAAGGAAATATTTCAGATTTCCCAAATCTTTGATTTCAAATTCATCACCCATTCTCTGCTTTAGTTGACTGATTTCTGTTTGATCATCTCCAGTCAAAACAATGTCATCCACATACACTATTAGAATAGCAATCTTTTCTGTCTTGGAAGCCTTTGTAAATAAAGTATGGTCAGAGTGCCCTTGACTGTACCCTTGGGACTTGACAAAGGTAGTGAATCTGTCAAACCATGCTCTCGGAGACTGTTTCAGACCATATAGAGATTTTTGGAGTTTACACACCTGCTGACTAAATTGGGCTTCAAATCATGGTGGGGGGCTCATGTAGACTTCCTCCACAAGGTCTTCATTCAAAAAAGCATTCTTAACATCCAGCTAGTATAGAGGCCAATCTTTGTTCACAGCAACAGATAGCAGGACCCTAACAGTATTCAATTTAGCAACTGGAGAAAAAGTTTCTGAATAGTCAATACCATAGGTTTGAGTGAATCCCTTTGCCACTAACCTTGCCTTTGTCTATCAAGCGTACCATCTGCTTTGTATTTGATAGAGAATACCCATTTGCATCCTACAGTTTTATGTCTCTTGGGTAGAGCACAGATCTCCCAAGTTCTATTCTTTTCGAGAGCCTTCATCTCTTCCATAACAGCATTATTCCATTCAGGACACTCTAGAGCAGTGTAGATATTTTTCGATATTATGGTAGAGTCAAGGCTTGCTGTAAACGCTCTAAACTGTGGAGAGAGATTATCATAGGAAACATAGTTGCAAATGGGATGTTTAGTGCATGATCTGGTACCTTTTCTCAATGCAATTGGAATGTCAAGAGAGGGATCATACTCATCAAGTTTCCTTGTATGACCCTGTTCAGCTTCATCGTTACTGGTTTCTATTCTAACCTCAGTCTCATCATCACGGTTCATTTCTTCCATATTTTCAAGAACAGCAACATCAGACTTGTCATTCTCACTCATTGTATTATTAGTACTAGGGTTTTCCATACCTTGGTCTCGAGGAGGTTCGAAATCTTGGACTGGAGCCGGCGGTTGATTAGTAGGGGACCCAACTTCCTTTCTGAGATTCCTCCTATAATATGTTTTCCAGGGAACTTGGTTTGTGGGTAAGATTATGGGATGAGGATCAATGTCAGACACGGTAATAGGAGTAGGTTCAACAAATTCAAAGATGCTGTTAGACTCTTCACTCACATTCTCTCCTGAAGATGGCTAACGGGAAAGTAGGGTCGGTTTTCACAGAAAGTAACGTCCATAGTGACAAAGTATTTCCTAGACGGCGGGTGAAAACATTTATAACCGCGGTGGTGAAGGGGATACCCAACAAACACACAGGCCTGAGCCCGAGGGGTAAATTTGGTCTGATTAGGGCCGAAATTATGGACATAGGCGGTGCACCCAAACACACGAAGAGGAACCTCAGAAACAAGACGAGTAGAGGGGTAAGACTCCTTAAGACAATCTAAAGGAGTCTGAAGGTGGAGGATACGAGAAGACATTCTATTGATTAAGTGAGCGGTTGTAAGAATAGCATCTCCCCACAGGTATGATGGAAGGGAAGTGGAAAGCATAAGTGAACGGGCTACTTCCACAAGGTGTCGGTTTTTTCGTTCGGCCACTCCATTTTGTTAAGGAGTGTAGGCACATGAGGTTTGGTGAACAATCCCCTTGGAGGCTAGAAATTCACTAAGGTTATGGTTTTGGAATTCCCGACCATTATCACTTCGAAGAATTGCAATTTTTGTATGAAACTGTGTTTTGATAGTATGATAGAAGTTTTGGAAAATGGATGGAACCTCGGATTTATCTGTGATAAGGTAAACCCAGGTAAGACGGGTATGGTCATCAATGAAAGTTACAAACCATCGCTTTCCCGAGGAGGTGGTGACCTTGGAAGGACCCCAAACGTCACAATGGATGAGGTTAAACGGTTGTGTAGGTTTATATGGTTGTGAGGGAAAAGAGACTCGATGTTGTTTAGCCCGGATACACACATCACAAGATAGAGAAGAGACATCAAGTTTAGAAAAAAGGTGGGGAAATAAATATTGCATATATGTAAAGTTTGGGTGGCCCAGTCGAAAATGCCACAACATACAGTCTTGTTCAGAAGTGCTAAAGTAGGATGACAGTAAACTAACCCTAGACAAACTACTACATGAGGTATCATCATCAAGGATGTAAAGTCCTCTGCTATGCCGGGCAGTGCCAATCGTCCTCTCCGAGCTCATGTCCTGAAAATAAACCGATTCAGGTAAGAAGATAGCTTTACAATGCAACTCACGAGTGATCTTGCTTATAGATAACAAATTGTAAGACAGTTTAGGGACATGTAAAACATTCTGGAGAGCAAAACCGTCAAAAGGAACTATTTGTCTTTGCCAGCGATCGGAGCTAGAGAGCCATCGGCTATTCGGATTTTTTCATTACCGGCACACGGGGCATATGAGATAAAGTGTTTCGAAGAACCTGTCAAGTGATCTGTAGCCCCCGAGTCTAAGGTCCAGGGATTCTTCCTATCAACGCTAATAAGCCCAAGGGACTGAGGCATACCTGACTGAGCAATGACACCCAGAGTCGGAGTCTTGGTCTGGCTCGCAGTAGGATCGGTTGATTGAGAAGTGCTAGCAGGTGTAGTCTCACTAATGTAGGCATGTCCTGAGTTCTGTTTCTCATTGGAGGATTGTTTCTTACCTCCTGGGGGACGACCGTGGAGTTTCCAACACTGATCCTTGGTGTGCCATTGTTTCTTGCAGTGCTCACACACAGGAATTGACTTCCCATTATTCTTGTCACTATCATGATTTGAGGACCGAGCGCTAAAGGCAGTGGAGTCAATGGTAGGGTAGTCAATACACCCATGGCATTAGTGCGATCCTCTTCCAGGCGGACTTCAAAACAAACTTCCATTAGGGAGGGAAGAGCTCTTTGTCCGAGTATACGACCACAAACATTATCAAATTTGGGATTAAGTCCTGCAAGGAAGTCATAAACACGGTCAGCCTCTTCAAGTTTAGCATATTGTGTACTGTCATTTGGTGTGCCCCAAACTGTCTCTCTGCACAAATCCATCTCTTGCCAGAGGAGAGAGAGCTTGTTAAAATAGGTAGTTACGTCCAGGGTCCCTTGTTTGCAATTATGGACCTGTTTTCGCAGTGTATATAACCGAGAGGCATTCTGTCGTTTCGAGTAAAGGGTCTGAGTTGTATCCCACAAATCTTTTGCTGTGGCTGCATATAGTAGAGGCTTGCCGATCTGTGGTTCCATACTATTAATCAGCATAGACCGAATACGTGAGTCCTCTCCTTTCCAGAGTCGTTCCAAGGCGTCTCCTGGTGAAGGACGTATAGTCTCTCCAGTTAAGAAGCCGAACTGGTGTCGACCTTCGAGGAACATCTTTATTGATTGGGACCAAGAAAAATAATTTTGACCATTTAATTTTTCACCTGAAAAATTCCCCAAAGAGCCAGTTATATAATTTGACTGTAAATTAGGGAACGAAGTTACTGGGTTCTTGGAATACATCGGCAACTCAGTTCGTTTGGAATGCGTCGAAGATTTGCCCGCTTCAATGTCCGATCTGTTCTGGGGTTGATCAATTTCGTTACCCGAAAACAGCGGTTGCTATAAAGAGTCAACGTACAGCTGCTGCTTACTGTACTGATTTGACAGATTTACGGTTGAGGGTTGCTGTCCGGAGCTCATAGGCGGCGCGTGAGGAAGCGGATGGCCGGAAGGGTTTGACGATTGGACATCCGACGGCGCGTAGAAGGGAACGGGATGGGTGGTGACGTGAAACGGCGGCAGCGCATGGGCCCACGCGTCGGACACGAGCGGCGCGTGAATCATCTTTTGGTCAGACGGTGGCGCGTACGGCTGCGGAACCACCCCCGTTGGGTAGATCGGCGGTTTCTGTAGGTTCTAAAGCAGTTTCTCCATGGCGGCGGCGACGACGGCGGCGATTTCGGCGGCAGTGACGGGTTCAGTTTCGATCTGGGTTTCTCCTAGGTTATTTTCTAGGGTTTCGTTATTGCTTTGCTCAGATACCATATTGAAAGCAATTAACAACAACCCGAGACTTACGTGGAAACCCGAGAACCGGGAGAAAAACCACGATACTTTAGTTTTTATTATTTTTCTTATGAACAAAATAAAATAGGTACAAAGGGAGAATAAATAGAGTACAATAGGAATAAGAAAGGAAAAGATCTAGGAAATATTTAGGAAATAAAATCTTATATTTTATTCTTTCCAAAAGTACTCTAGGGCAAAGCCCTACTAATTCTAACAAGAAGAAATGTTAGTATTTGGTCCTCCAATCCCTGTAGGGGTTTTTTTTTGGCATTATAATATATTCTCCCCTTCTCCACTTCTGGTTGCCTCTCTTTTCTCTCTTCCTATGTTTTGTTCATGCAACCGTCAACAGTGCACTCTCTGAGGTACAAGGAAGACCTTTTCTTTTGTTTTGGGATTTTCAGTTTACTCATCACCTTCGACTTGTTGGTTGAGTGTGTTGAGTGTCTGTTTGGTTTGGAATAGAGATGGCACCCTGGTGGAGGAGGTGCTTTCACGCTTTCCATTCAAGGAGCAGGGTAAAGTTTTTTAGCACTTGTACTTTTTTGATGTTTTGTGGGGCTTTTGGTGAGATGAACAATAGAATTTGTACATAGGTGAAGAGATAGGTGAGAGGAAGTTCGGGAGGTGGCTAGGTGTAATGCTTCTTTATGGGCGTCGATCACTGGGCATTTCTGTAATAGCCTAGTCTCGTTCTTTTGAATTGAGTCCTTTTCTACACCAAGGTCAAACTCCCATGTTTTGTCGTTTCTTGTCTTTTTTGTGTACGGTGTTCTTTGTATATTCTTTCATTGCCTTGGTTAAGGATGGTTAAAAATGATTTTAATGTATGCCATTTGTTTGTATTTTCCTATATTTGTTTTTTTTATTGCATCATTTACATTGTTGCGATAGTTGATTTTGGTTTGATCTGTATTTTTATGTAGGTTCCTACTATGGCTATTGAAAAAGTTCTTTTTGCAAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATAGGTTAGGTCTCATTCCGATTCGTGTTGATCCAAGGCTTTTCAAGTACTCAGGTATTTCGGTGTGTATATATGTAAATTTAATGTGCTTATGCATATTGATGCTGAAAACTTCTAAATGCTTCTTGTCAAATACTTCAAATTTGACTATCATCGTTGAACTTTTCAAGGATTTGGACTAATGATTTTGGTTTAAAATTAGATAAAGACGCACCAAATGAGAATAATACCATTGTTTTTAGGCTCCATGCTCGCTGTGAACGAGGAAAACCACGTCTTACGGGTATTTTTCTTGTTTCTTTTGGAGTTCATCCTCTATTCACAACTTTTCTTAATTATCAACTGTTCACAACAATTTTCTTTTTTCACTACTAATGATGAATGTATAATTTGTGGTTCAGTGAAATCAGAAGCATTGACTTGGTTGCCAAATGGTAGTGAATTTCCCTTGGTGTCTGACAAATCAATTCCAAACTCAAAACCCCAAACCTATACTTCTTTTAGTTGCAGCCAAGACAAACTGCCAGAATTTTCCAAAAATTCAATTGGTCCAAAGGACAGTGATATTATACTTGCTAGACTTGGCCCTGGTCAGGTAACTGAACCCTAGAATTTATTTCGTATCTGTTGAAAAATAGGGAAGAAGTGTTCATAGGTAGATAGATGTATGCTTCAAATAACATGTTTGAATTTGAAATGGTTCTTGTGCTTGTAGTAAAATTGTTGCTATTACATATGAATAGGTTTTTTACTTTATATTATTTTTATAAGAAACAAATTTCATTGATGTATTAAGTTTACAAAAGAAGTAATAATTTTACTTTGGATAATAATTAGTCCAAATCGCTTAACGGTAGAGTGTGAATAGTTGCTGGCCAAATATTTTCTAGGTCTGCCAAAAGGCTTTTTGAAGGAAAAGAGTATATTGTAATCAACCTCCAATCACACTGGTCTCTTAAATGTGTCAAGTGGGTATTGTTTAGTGGGTATTTTCTAGGTCATTCCTTCAATTCCTCATTAGATTGATTTCGTCTAAAAAACATATAGGAATTTGACATATATAATTTTTAACTGGAGTTGCTATCACTTCCCAAATAATAAAGTTCTTTTCTATAGATATTTTTATGCTATTGTTCATAGAGTTGTCTCTTGGTGCAAATGCTCCCCCCTTGTCCATCATTATAGCCATTCTTCCCTTCTCTCCTATGAGGGAGGTGACAGGTCTTTAGTAAATATTTTGTTTGGGGGTTTTCCCCTTTGTAATTTCGTACCTCCAACATTGTTTCTTATCCCAGAAAAGATCACTTTAAATGTTGTACTTGTGCTATAAGATTAGTTATTTATACTACAAGTTCCTCTGAAAGCAGTGCTTATGCTATATGGCTAATTGTCTCAGTTCTTAATGGGATATTGTTGCTCGGTAGTTAGTAAGTTTCTTAACTTTTGCTTCGAATATTTATAGGAAATTGAGCTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCTGTGGCCACTGCTTGGTACAGGATGCTTCCTGAGGTGAGTAAATATGTTAATGTGTTACTCAAGGATGCATTGATATATTGAACTGATGAAACTTATAATATTAGGTTCTACTCCTGGAAGAAATAGAGGATGAGCTAGCTGAAGAACTAAAAAGGAAATGTCCTGTCAATGTATTTGACATTGAAGACATAGCTGGTTAGTATCCTTCTTACATTTGCTATTAATTATGTTCGTACTTGGAAGATTATGATGTTGATGATTGGGAGATGGGAAGGTTTCCTTGAGAGTAGAGTTCTTGTGATGTATATAACTAATTTTTCTACTTTTGGGAGTCTTGTCTATATACTTCATGGAGTTTTAAGCCTCGTAACCTTTCAAACATCAACTATATGTTACCTAATAAAAGCATAGAAGGGGTTATCTCTAGTGTTTTAAAAGGCGCGCTGAGGCGCGCGCCTAGGCGCAAGGCGCACACCTTGCGTTTATTTGTGGAGAGGCAAGGCGCAGATGAAGAGGCGCGCGCCTTCCTCCAGGCGCAGTAGGCGCAAAAGCCCCAAAGGCGCGGGCTTTATTATTTGGGCTAGGCTGTAATTAAAAAAAAAAAACTATTATACCTATTACGTGTTTTACATATGGCTATAAGTCCAACGAAGAAGATACCGATGGCTATAAGTCCAACGAAGGAGTGAATGAAGATGAGGATCAATTTAGTGATGATGAGTTTGATCTTTAGGAATGAACTTTTATTTTGATTGTTGTTGAATTCTGACTAGTTTTCTATTGTGTTTTGTTTTTTGGGTAGAAAACTAATATTATAATATTTTATACATTAGAGTTAATTCTCATTTCCACATTGGTTATTTACTTATATTTTATAGATTGTTGTTCCTTTCAATTTTGTATGTATATATATATATATTTATATATAGTGCGCCTCATGAAAACAAGCCTGCACCTTTTTGTGCGCCTTGCGCCTAGGCCCCAGAGGACCATTGCGCCTTAGTGCGTCTTGAGCTTTTAAAAACACTGATCTCTACCTATTGCCTCTAGGATGTTCTTTGGTTATTTAATAACGTTTTTGTTTTTTACCGTTGGAGTTAGTGGGCTTGACCCATAGGAAATTTTTGGGAGATTTGCCCTAAAAATCTATCCTTTTTTATTTCATTGTATTATTCTATTTATTCCTCCTCCGGTATCTATTGTATTTATTAGAAAAGAATAAGAACAATATATCAGAAAATAATAAGAACAATATATCATGGTTTTTCTTACTGTTTCCATGTTACTCGGTTGTTTATCACTTTTAATATGGTACCAGAGCAAGGTAAAGATGATACCCTAGACACTATTATCAAAGAAACCAAAAAAGAGACAGAAGAGACAGCTGTCGTCGTTGCCGCTACTGAGATTGCCGCAGTTGTGGACGTCGCCGTTGCCGCTGCCATGGAAAAGTTGCTCCACCAGCTTCATAAGATGCCAACAGTCTCAATGGGCCTACCCTCGGAGACATCCGTGCAACCTAGTGGTCAATTTGCCTCACGCACCATCACTGTCAGGTGCGTGGGCCCACTCGCCAATGTCCAATCATCTCACCGCCCAGCCTATTTTCTTTCACGTATCATCCCTTGTCCAGCCGCACCTCCATGTGCCATCACTACCCTTCGGTTACGAACAACCATGAATTTCGTCAATCCACACGCCGCTGTCGTTTGATCCTTTACAGCAACCATACTTCCATTGTACCAGGATTAACCAAATTTGTAATAGATCGAGGGTTGAAGTTGGTGAGTCTTCGACGCATTCCAAACCAATCGACCTGTCGATGTATTCCAAAAGCCCGATAACTTCGTTCCCTAACTTGTCCTCTAATTATATAACAAGTTCTATGACAACATCTACAACTGTCTTTCTAGGAGAGAAGCTAAATGGCCAAAATTATTTCTCCTGGTCTCAATCGATCAAAATGTTCCTCGAGGGACGTCAACAATTCGGGTTTTTGACAGGGGAGATTCTCCGTCCTTCACTTGGTGATGCTCAGGAACGCTTCTGGAGAGTAGAGGACTCATTTGTTCGGTTCATGTTGATTAGCAGTATGGAGCCACAAATAGGCAAACCCCTACTTTATGCAGCAACTTCGAAGGATCTATGGGACACTACTCAGAAACTATATTCAAAGCATCAGAATGCTTTTCATTTGTATACTTTGAGAAAACAAGTCCATGAGTGCAAGCAAGGAACATTGGACGTAACCTCCTACTTCAACAAACTCTTTACTGTGGCAAGAGATAGATTTATGCAGAGAGATAGTATGGGATAAACCTAATGATGGCTTATAGTATGCTAGGCTTAAAGAAGTTGATCGGGTTTATGACTTTCTTGCAGGCCTCAATCCCAAGTACGACATTGTTTGTAGTCGTATTCTTAGCCAGGGACCTCTTTCCTCCCTAATGGAAGTGTGTCATGAGGTCCGTCTTGAAGAAGACCGTACAAATGTCATGAGTATACTGACTACCCTTACCACTAACTCCTCTGCCTTTGGTGCTCGATCCTCGATCCATGATAAGGAGAAGAATAGTGGGAAACAAATTCCTATATGTGAGCACTGCAAGAAACAGTGGCACACCAAGGATCAATGTTGGGAACTCCACGGTCGTCCCTCAAAAGGTAACAAACGGTCCTCTAACGAGAAATAAAACTCAGGGCGTGCCTACATTAGTGAAACTGCCACTGCCAGTGCTAGTACGTCTCAGTTCATTGGTTCTATTGCAAGCTAGACCAACGCTCCTACTTTAAGTGCCATTGTTCAGTCAAGTATGCTTCAGTCCCTTGGTCTTATTAGTGTTGATAGGAATAACCCTTAGATTTTAGACTCGGGGGCTACGATTACTTGACAGGTTCCTCGGCTCACTTTGTCTCTTATACTCCCTGTGTCGGTAATGAGAAAATCCAGATAGCCAATGGCTCTTCAGCCCCGATTGCTGGCGAAGGACAAATAGTTTCCTTTGACGAACTCTCTCTCCAGAATGTTTTGCATGTGCCTAAGCTTTCAAACCTGAATTTGTTTGTTTTCAGGATTTGAGCTTAGGGAGGATAATTGGCGCTGCCAGGCATAGCAGGGGACTTCACATCCTTGATGACGATACCTTCAATAGTAGTACCTCTAGGGCTAGTTTATCGTCTTTCTATTTTAGCACTTTTGAACATGATTGTATGTTGTGGCCTTTTCAGTTGGGCACCCGAACTTTAATTATGAAATATTTGTTTTCCCATCTATTTTTTTGAAATTGATTTCTCTCTATTCTGTCATGTGTGCATTCTAGGAAAACAACATCAAGTTTCATTTCCCTCACAACTCTATAAACCCACACAACCATTTACCCTTATCCATAGTGAAGTTTGGGATCTTTCTAAGTTCACCACCTCATCTGGGAAATGGTGGTTTGTAACTTTCATCGATGATCATACCCATTTTACCTGGGTCTTCCTTATCACAGATAAATATGAGGTTTTCTCTGTTTTCCAAAACTTCTATCATACCATTGAAATGCAATTCCATACAAAAGTTGCAATTGTTAAGAATTCAAAAACCATAACATTAGTGAGTTCCTTGCCTCCAAGGGATTGTTCACTAAAATTTGTGTGTCTACACTCAACAAAATGGGGGGGAGGGGGGGTCTAAATGAGTGTTCACTCTATAAAGTAGATGGAACACTTGATAGACAGGAGACAAGGTTAGTTGCCAAGGGGTTTACTTAAACCTACGGTGTTGATTATACTTAAACCTACGGTGTTGATTATTCAAAAACTTTTTCTCCTGTTGCTAAGTTTGAATATTGTTAAAGTCCTGTTATTCGTTGCTGTAAACAAAGATTTGTCTTTATACCAGTTGGATGTTAAGAAGGCTTTTTCAAGTGGAGGAAGTTTACATGAGCCTCCACTTGGATTTGAAGTCCAATTTGGTCAGCAAGTATGTAAATTTCAGAAATCCTTATATGGACTGAAACAGTCATCCAGAGCATGGTTTGACAGGTTCACTACCTCTGTCAAGTCCCAAGGGTATAGTTATGGGCATTCTGATCATACTTTGTTTACAAAGGTTTCCAAAACTGGGAAGATAGAAGTTCTGATAGTGTATGTTGATGACCATTTTATCTGGAGATGATCAAGCAGAGAATGAATGATGAATTTGAAATCAAGGATTTAGGAAATCTGAAATATTTCCTTGGAATGGAGGTGGCCAGATCTAAAGAAGGCATGTTAGGATGTCGTCCTCTTGATACTCCTATTGTATTCAACTGTAAACTAGGAAACTTTGGTGATCAAGTTCCAGTTGATAACGAATAATATTAGCGCCTTGCAGGTAAATTGATTTACTTATCTCATACACGTCATGATATTTCCTTTACTGTGAGCGATGTTAACCAGTTTATGCACGTTCCTTATGAGGAACACATGATAGCTATCAACAAAATCCTGAGATACTTGAAAACGTCACTTGGTAAAGGGTTGTTTTCAGAAAGACAGACAGAAAAACTGTTGAGGCCTACACTGACTCGAACTGGACAATATTTGTTGTTGACAGGAAATCTACCTTCGGTTACTGCACCTTTGTATGGGGCAATTTGGTAACTTGGAGAAGCAAGAAGCAAAGTATCGTGGCCAGGAGAGTGCTAAGGTCAAATATCGGGCTATGAGTTTGGGGATATGTGAGGAAATTTGACTCTATAAAGTCTTATCATTCATCAGGAGTGTGAGACACTAACGAAGCTATTATGTGAGATTTGTCCTAAATATATTTCCTTTTTTATCTCATTGCATTACTTTATTTATTCCCTCTCTTGTACCTATTGTATTTATCAAAAAATAATAATAACAAAATTGAGAAGAAAATAAAGAGAATTCCACTCAAGGGGGACGGGGACGGATTCTGACCTCTTCCTTCCGCCGAATCATGATCTTCTGCATTGTGGGGTTTTTCTCTCAATACTTGGGTTTCCACATAACTCGGTGTTCTTGTCTTTATCACTTTTAATCCTTACCGTTGGAAATTAGAGGCTAGTGGATTGTTTATGGCTTTATTGTACCCTACTTTTATTTCCTTTTTTGTTTGGGCTTATTATGACTATATATTCTTCTTTCTTGTATCCTTTTGGTCATTAGAAAATAATAAGAAAGGCTTCTATCATGATTTTTTCTTCCTGTATTAGGGTTTTTCACGTATAACTTGTGCTTTTTCTTGTTTCTTCTTCTTCAATATGGTATTAAATTGGAGGAACGATGAAACCCTAGCCGTCATTGACAAAAATCAACCAATGGAAAAACTTATCATGGAACCCTTGACCATCGACGATAACCTCACCAACGCTATAGTCCCTACCGTTTTTCCTATCAGAGCTGCCATTGACCAATATCCCTTGCACTTCCTACTACCTCGTCTGTACAACTACCGTTTGTATAGCGTCGTTGTTTGTTTAGCTGCAGCTGCCCAATAGCAGCTGATCGGCCTCCCCTTTCCATTGATCAATCTTTTGTCGTCAACAGCCCCCCACGGCACGACTGCCTTCCACCTGCTAGCAATCCCGCTAGATAAACTCCTTTTTCATAGCCGACGTCAGCCACACCTCCATCCGTATCAGACTTGAACTTCTTCCATTTGGCTTCAACACTTATCTCGAGGATGAAAGTGGCAAGTCTTTTGCTCACCATAAAGGCAAATCTCTTTCGGATGGTCAACGTGGTATCCTCTCAGCGATGGTTCAACAACTGGCAAATCTCTAATGAATTTTCAGCAACAAATAGCTGCTCTCGGAGTAGCTTTAGGTGCTTCCACCTCCACAATTTTGTTATTCTGTCAACCTCATTGATGTATTCGTGGAATCGAGTAACTTCCTTCCCTTCCATAGCTACAACAAATTATTATCTGGCTATGGGAAATTCTACGGGTGTAATTGGAGGGGAGAAATTGAATGACCAAAATTATTTCTCATGACCTCAATCTATTAAGATGACAGTTGGAGGGCATTACCAATTCAGGTATCTAATAGAAGAGGTAATGAGACCTTCAAGAGAGATTTTGGAAAGGGGAGACTCTTTCTTCGATCTAGGTTGATTAAAAGTAGGGGTGATCATCGGTTGGTCAAGAGTCGGTTTTTTTGCAAAACCAAGCCCGAACAGACCGTAATCGGTTTAGTAAAGTGTCAAACCGACCTCGACATCGATGAGTAAGGGTCGGTCGGTCGGGTCAGTTTAGCACTTAAAATCTTTTTGAAAATTCTCGATTTGAAACCTTTTGAAATTGACCATGACCGACTGACGTCGGTGTGGTCGGTCGGTTTGATTTTTCGGTCTATCATGCTCACCTCTAATTAACAGTATGAAACCTCAAATTGGGAATCCTTTGTTTAATGTTGCATATGGGAAACAATTAAGAAGTTTTACTAAAAAAGGAAAAATTATGGTTGCAGAGGTGGGTGGAGGTGTTTGATTGTAAGGTTAGCTTCTTCTCGTTGATCTTCGTTCCAAAGGGGTTGGGCTTCCTTTGGGGCACAAACCAATGGTTGTGATTTTTTTGACCCCATTTGTGAGAAAATTTGTTTAAGTTTGGCGGCTTGAAAGAAAGATTTTTTTCTAAAGCTAGGAGATTAACTTTGATTAGATCGGTCTTGAATGGTATTTCGGACTATTATATTGTCATTGTTTTGTGTCCCAAGTTCGGTTTGTAAAAGTTTGGAGAAGTACATGAGAGAAGTTTGGAGAAGTACATGAGAGATTTTCTCTGGGAGGGAGATGGTAGGGTGTCCAGAGTATAGGGGGGTTAGAGATTGGCAATCTTCGAATTCATAATAGAGCGTTGTTGGCTAAGTGGTTCTAGTGCATTTCTCTTGAACTAGGCTCTTTACGACATAGGATCACTATGAGCAAGCATGGCGCCCATATCTATGACTAGACATCGAAAGTGGTTAAAGGCACACACTCAAATCCTTGGAAGGATGTTTCCTTTGAGTTTCTCACTTTCTCTCGGTTCATTTGTTGCTTAGTGGGGGATAGTAAGGATACGTACTTTTAGGAAGATCAATGAGTAAGGGGTGACTACCCTTCGCTCTTTATTTCCTCATCTCTATCATTTATCTTCATTAAAAACTAAATGTTTTTAGACTGTCTTGTTAGCTCAGAGAATCCTGCATCTTTTTCCTTTGGTTTTCGTCGTAATTTGACCAATAGGGTAGTGACGGTAGTGACCTCTTTTCTTTCTTTGCTTGAGGGGTGTAACGTTAGGGAGGGGAGTTAGGATATTTGGGTTTGGACTCCTAATCCTAGTTGGGTTTCATGTGTAAATCTTTTTTTTAGCCTTTTGCTTGATCCCTCCCCCCATACAGAGTCGGTTTTGATGTGGTATGAAGGACTAAGGTTCCTAAGAAAGTTAGGTTTTTTATCTAGCAAGTCTTGCTTGGTCGTGTAGACACTATGGATAGGCTTGTCAGGAAGAGGACTTCGCTTGTCAACATGCTTTGTTGGAAGGCGGAGGAAGGTTTTGATCATCTTTTCTGGGACTGTTATTATGCGAGGGCTGTGTGGAGCTCTTTCTTCCAAGAGTTCAGTGTGAATTTTGTAAGCTTTAGGAGCGTCAGAGCGACAATCGAGGAGTTCCTCCTCTATTCGCCTTCCAAATATAAAGGGGGTTTTTTATGGATGTATGGGATGTGTGCTATTGTTAGGGACATTTGGGGTGAGAGGAACGAGTGGGATTTTAGAGGTTGGGAGAGGGAGCTTAGCAAGATGTGGTCTTTGACTAGACTTCATTTTTCGTTTGGGCTTCGATTTCGAAGCACTTTTGGAATTATTCTATTGGTAGCATTTTACTTAGTTGGTCCTCCTTATGCTGGTTGGGTTGGTGGGCTGATTTTTTTTTTTTTGTATGCCCTTGTATTCTTTTATTCTTTCTTTAAGAAAGCAATTTGGGTCATTAAAAAAAAAGGCAAAATGAGGTGCACATTTATACTTTGTGCAAGCAGGTCCACGAATGCAAGCAAGGGACAATGGATGTCGCTTCATATTTTAACAAGTTGTCCCTGATTTGGCAAGGATGGACCAGTGTCGAGAGATTGGCTGAAATTGCTCCTGGGGAGGTGTCTAGTACTCCAAAATTGAGGAAATTGATCGTGTATATGATTTTCTTGTGGGTTTGAATTCCAAGTTTGGCTTAGTTTGTGGTCGTATACTAGATTAGAGTTCTATCCCTTGATTGATGGATGTATGTTTTGAGGTTTGGTTTGAGGAAGATTGCACAAGTGCAACAAACCTCGTGACTCTTTCTGGTATTGATTCTGCAGCCTTCAATGCGAAGTTCTCCAGTTCTAACAGTGAAAAGTCAAATGGAAGTCTGTTCTAGTGTGTGAACATTGCACGAAACTTGGGGATAAGGAAGTCAGTTGTTGGAAGTTACATGATTGACGACCAAATGGTAAGAAAAGAAATGTGACAGAACGAAACGTGTGAAGATAGACATACATTTCATAAAGGAGAAACTTGACAATGACAGTATCTGCATTCTGTACATTCCTTATGATCAATGAATTGTTGATGTCCTCACCAAAAGGTTAGTGAAGCAGAGCTTTGACTATTTTGTTGACAAGTTGGGTCTAATTGACATCTGCACATCAACTTAAGGGAAAGTGTTGGAAATTAGGGGCTAGTGGAGTGTTTATAGCCCCAAGGATCTTAGTTTTAGTTTCCTTTTTGCTAGGACTTCTTATGACCTATATAAATTCTTCCTCTTGTACTCCTTTAATTATTATATAATAAGAAAGATTTCTATGGTAGTTTTTTCTCCCTTTTTACCATATACTTGTGCTTTCTCTTCTTCTTTGTTTCTTTTTCAATACTTATAAAAAAAAAGTAATAGGAGAAGAGAGTTAGATTTTTTCCCCTATGTATATTACATCGCTTGCATTTCTGATCAATAAATGAAGAATTATTTGTTTTTTCTGATACTCAAAAGATGGATTCCAAGATGTATGCTGTTACTCTTTTTTTGCTGAGTTCAAATTGCATTTCTTTTTATGGACAATTTTTATTTTGTAGGTAAGAAAAGGGCAACCGTAGCACGCCCACGAGCTTGCACATTGTGTAGAGAATGCATAAGAGGAGATGCATGGGAGAAACGTGTCGCATTGCGTCGTGTGAAAGATCATTTCATTTGTAAGTAATGATTGGATTCTACATTTTTTAATATGCTTAAACTGCCTGAAACAAGTATTTTGGCCAAAACACTCTACTTGCTATGTTTTTGTTTTTTTTTTTTAACGAGAACCCTACTAGTATTTTCCTCCCATAGTGTACTTCAAGTGCCTTTTAACTTCTATAAAAAGAAAAAAAAACTTAGAAATTACTTCTAAACATAATAACTCTAAGTAGGTAAGTATTTTTGTCGTGAAAAAGTCCTTTTAGTTGTGCCAAACATGCCACCAAATAAACCTGAACTTAGTTATCGTCATTTTCTCCCTATTATTACCATCCTTTTTAGTTCTAACATTTAGCAATTTGAATCTCTAGCCGTTAGGTCAAAGACATAATGATGTTAGCTGGCTCTTAGTTACGCTCAAGTCATATCTTATTGTTTAAAGAAAGTTACTTTTAGTTGAGATTAGGTTTATATTTTCTTTCATTTCCTATGCAGTTAAGATTGAATCAACAGGAGCTTTACCTCCCAATGTTCTCTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGCGAACGTTTAATTGCCGAGCTGTCTTAATTCCTCTTAATCCTTAAGTCACAGACTATATTATTTTACTATATTTATAGGTCACCAATTTTTGTAACATATGAATGGATTATTAAGTTTTTGTTTTGAATTGACAGTGGAATAGCTTCTTCACCAATGGATTACCAAAGGTATCTCAAACTATTCATGTGTGTTTATTGTATAGTATTTGTAGATGACAATCTATTTTAATTGAAATTGAAAAAAAAAAATTCTAACCTAAATTAATTTAAGTACAGATATAGGAAGAGAAACTTAAGACACAATTTGTCATTTGAACAATTTTTGTTTTCTTTGGAGCTTAACGTTGAAATTGTACTCTGGTGAAATGAGTATATGTATCTCTCAAGACTCTTTTAAGGTACTCTCTATTCTCTTCTCCTCTTTGCTTCACTAATTATTATTAATCTATT

mRNA sequence

ATTGTATTTCCCATGACTATTTCTTAAACCCTCCCTCCTCCCCTCCCGCGTCTAAAACCTCCTCAGCCGTGCTGCTGAGTGCCGTTGCCGCCGTCTTTCTCGATTTTCCTTATCCGCCGGATATTTCTTCCTTGTTTTGGTCTCAGTTACAGCCGACCCACTGACTAAATAACTGTGCGCACACTGAATCGGAAGTTGACAATGTCCGGCAAAGATAAGAATTTGCATAATATGATGACGGAGTCGGAATCCGAACAAGAAGATGTTGGAAAAGAAGGCATTGAGTGGATAATGAATCTTCCAGACGTGCCCATGAAGCTCCCACCACATGTTGAATTGCAGAGAACTCGAGTCGAATGCAAAGCCGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTGCTTCCATGGGCTTTGATAACAGTTTACGTCTGGATAATTTTCGCAACAACTTTAAAATTGAAGTTATTAATCTGAAAGGGGATGACATTGAGTTTGACATGATTGGCATTGATCCAGCACTTGCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTTCCTACTATGGCTATTGAAAAAGTTCTTTTTGCAAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATAGGTTAGGTCTCATTCCGATTCGTGTTGATCCAAGGCTTTTCAAGTACTCAGATAAAGACGCACCAAATGAGAATAATACCATTGTTTTTAGGCTCCATGCTCGCTGTGAACGAGGAAAACCACGTCTTACGGTGAAATCAGAAGCATTGACTTGGTTGCCAAATGGTAGTGAATTTCCCTTGGTGTCTGACAAATCAATTCCAAACTCAAAACCCCAAACCTATACTTCTTTTAGTTGCAGCCAAGACAAACTGCCAGAATTTTCCAAAAATTCAATTGGTCCAAAGGACAGTGATATTATACTTGCTAGACTTGGCCCTGGTCAGGAAATTGAGCTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCTGTGGCCACTGCTTGGTACAGGATGCTTCCTGAGGTTCTACTCCTGGAAGAAATAGAGGATGAGCTAGCTGAAGAACTAAAAAGGAAATGTCCTGTCAATGTATTTGACATTGAAGACATAGCTGGTAAGAAAAGGGCAACCGTAGCACGCCCACGAGCTTGCACATTGTGTAGAGAATGCATAAGAGGAGATGCATGGGAGAAACGTGTCGCATTGCGTCGTGTGAAAGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCCCAATGTTCTCTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGCGAACGTTTAATTGCCGAGCTGTCTTAATTCCTCTTAATCCTTAAGTCACAGACTATATTATTTTACTATATTTATAGGTCACCAATTTTTGTAACATATGAATGGATTATTAAGTTTTTGTTTTGAATTGACAGTGGAATAGCTTCTTCACCAATGGATTACCAAAGGTATCTCAAACTATTCATGTGTGTTTATTGTATAGTATTTGTAGATGACAATCTATTTTAATTGAAATTGAAAAAAAAAAATTCTAACCTAAATTAATTTAAGTACAGATATAGGAAGAGAAACTTAAGACACAATTTGTCATTTGAACAATTTTTGTTTTCTTTGGAGCTTAACGTTGAAATTGTACTCTGGTGAAATGAGTATATGTATCTCTCAAGACTCTTTTAAGGTACTCTCTATTCTCTTCTCCTCTTTGCTTCACTAATTATTATTAATCTATT

Coding sequence (CDS)

ATGTCCGGCAAAGATAAGAATTTGCATAATATGATGACGGAGTCGGAATCCGAACAAGAAGATGTTGGAAAAGAAGGCATTGAGTGGATAATGAATCTTCCAGACGTGCCCATGAAGCTCCCACCACATGTTGAATTGCAGAGAACTCGAGTCGAATGCAAAGCCGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTGCTTCCATGGGCTTTGATAACAGTTTACGTCTGGATAATTTTCGCAACAACTTTAAAATTGAAGTTATTAATCTGAAAGGGGATGACATTGAGTTTGACATGATTGGCATTGATCCAGCACTTGCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTTCCTACTATGGCTATTGAAAAAGTTCTTTTTGCAAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATAGGTTAGGTCTCATTCCGATTCGTGTTGATCCAAGGCTTTTCAAGTACTCAGATAAAGACGCACCAAATGAGAATAATACCATTGTTTTTAGGCTCCATGCTCGCTGTGAACGAGGAAAACCACGTCTTACGGTGAAATCAGAAGCATTGACTTGGTTGCCAAATGGTAGTGAATTTCCCTTGGTGTCTGACAAATCAATTCCAAACTCAAAACCCCAAACCTATACTTCTTTTAGTTGCAGCCAAGACAAACTGCCAGAATTTTCCAAAAATTCAATTGGTCCAAAGGACAGTGATATTATACTTGCTAGACTTGGCCCTGGTCAGGAAATTGAGCTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCTGTGGCCACTGCTTGGTACAGGATGCTTCCTGAGGTTCTACTCCTGGAAGAAATAGAGGATGAGCTAGCTGAAGAACTAAAAAGGAAATGTCCTGTCAATGTATTTGACATTGAAGACATAGCTGGTAAGAAAAGGGCAACCGTAGCACGCCCACGAGCTTGCACATTGTGTAGAGAATGCATAAGAGGAGATGCATGGGAGAAACGTGTCGCATTGCGTCGTGTGAAAGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCCCAATGTTCTCTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGCGAACGTTTAATTGCCGAGCTGTCTTAA

Protein sequence

MSGKDKNLHNMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

Homology

[Close]

BLAST of IVF0001399 vs. ExPASy Swiss-Prot
Match: Q32L22 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Bos taurus OX=9913 GN=POLR1C PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 6.4e-80
Identity = 164/349 (46.99%), Postives = 220/349 (63.04%), Query Frame = 0


Query: 44  VELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFD 103
           VE  RTRV        +  T  + G ++  G+D++   D F  NF+++V+++  + +EFD
Sbjct: 7   VEEMRTRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 66

Query: 104 MIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY 163
           M+GID A+ANAFRRIL+AEVPTMA+EKVL  NNTSIVQDE+LAHRLGLIPI  DPRLF+Y
Sbjct: 67  MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHADPRLFEY 126

Query: 164 SDK--DAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQT 223
            ++  +   E +T+ FRL  RC R        S+      N   +          ++  T
Sbjct: 127 RNQGDEGGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHRVY----------TRHMT 186

Query: 224 YTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATA 283
           +       D  PE    +I P   DI++A+L PGQEI+L  H VKG+GK HAK+SPVATA
Sbjct: 187 WVPLGNQADLFPE---GAIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFSPVATA 246

Query: 284 WYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD 343
            YR+LP++ LLE +E E AEEL R     V ++++I GKK A VA PR  T  RE  R +
Sbjct: 247 SYRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEIQGKKVARVANPRLDTFSREVFRNE 306

Query: 344 AWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAEL 391
             +K V L RV+DHFIF +ESTG LPP+VL +EA+K+L  KC+R + EL
Sbjct: 307 KLKKVVRLARVRDHFIFSVESTGVLPPDVLVSEAIKVLMGKCQRFLDEL 340

[Close]

BLAST of IVF0001399 vs. ExPASy Swiss-Prot
Match: O15160 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Homo sapiens OX=9606 GN=POLR1C PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 7.1e-79
Identity = 162/362 (44.75%), Postives = 221/362 (61.05%), Query Frame = 0


Query: 44  VELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFD 103
           VE  R+RV        +  T  + G ++  G+D++   D F  NF+++V+++  + +EFD
Sbjct: 7   VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 66

Query: 104 MIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY 163
           M+GID A+ANAFRRIL+AEVPTMA+EKVL  NNTSIVQDE+LAHRLGLIPI  DPRLF+Y
Sbjct: 67  MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHADPRLFEY 126

Query: 164 SDK--DAPNENNTIVFRLHARCERGKPRLTVKSEA-------------LTWLPNGSEFPL 223
            ++  +   E +T+ FRL  RC R        S+              +TW+P G++  L
Sbjct: 127 RNQGDEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHKVYTRHMTWIPLGNQADL 186

Query: 224 VSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGM 283
                                     F + +I P   DI++A+L PGQEI+L  H VKG+
Sbjct: 187 --------------------------FPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGI 246

Query: 284 GKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARP 343
           GK HAK+SPVATA YR+LP++ LLE +E E AEEL R     V +++++ GKK A VA P
Sbjct: 247 GKDHAKFSPVATASYRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEVQGKKVARVANP 306

Query: 344 RACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIA 391
           R  T  RE  R +  +K V L RV+DH+IF +ESTG LPP+VL +EA+K+L  KC R + 
Sbjct: 307 RLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLD 340

[Close]

BLAST of IVF0001399 vs. ExPASy Swiss-Prot
Match: P52432 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Mus musculus OX=10090 GN=Polr1c PE=1 SV=3)

HSP 1 Score: 292.7 bits (748), Expect = 6.0e-78
Identity = 167/358 (46.65%), Postives = 220/358 (61.45%), Query Frame = 0


Query: 44  VELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFD 103
           VE  RTRV        +  T  + G +A  G+D++   + F  NF+++V+ +  D +EFD
Sbjct: 7   VEEMRTRVVLGEFGVRNVHTTDFPGNYA--GYDDAWDQNRFEKNFRVDVVQMDEDTLEFD 66

Query: 104 MIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY 163
           M+GID A+ANAFRRIL+AEVPTMA+EKVL  NNTSIVQDE+LAHRLGLIPI  DPRLF+Y
Sbjct: 67  MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPILADPRLFEY 126

Query: 164 SD--KDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPN----- 223
            +  ++   E +T+ FRL  RC R               PN ++     D S PN     
Sbjct: 127 RNQGEEEGTEIDTLQFRLQVRCTRN--------------PNAAK-----DSSDPNELYVN 186

Query: 224 ----SKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTH 283
               ++  T+       D  PE    +I P   DI++A+L PGQEI+L  H VKG+GK H
Sbjct: 187 HKVYTRHMTWVPLGNQADVFPE---GTIRPVHDDILIAQLRPGQEIDLMMHCVKGIGKDH 246

Query: 284 AKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRACT 343
           AK+SPVATA YR+LP + LLE +E E AEEL +     V ++E++ GKK A VA  R  T
Sbjct: 247 AKFSPVATASYRLLPAITLLEPVEGEAAEELSQCFSPGVIEVEEVQGKKVARVANARLDT 306

Query: 344 LCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAEL 391
             RE  R +  +K V L RV+DH+IF +ESTG LPP+VL +EA+KIL  KC R + EL
Sbjct: 307 FSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIKILMGKCRRFLDEL 340

[Close]

BLAST of IVF0001399 vs. ExPASy Swiss-Prot
Match: Q54SN4 (DNA-directed RNA polymerases I and III subunit rpac1 OS=Dictyostelium discoideum OX=44689 GN=polr1c PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.9e-72
Identity = 148/351 (42.17%), Postives = 212/351 (60.40%), Query Frame = 0


Query: 42  PHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIE 101
           P++E +RT+V        +     YSGA+ S+G+DNS  L+ F+ NFKI +++   +++ 
Sbjct: 13  PNLENKRTKVTLTNSGVENARGTYYSGAYTSVGYDNSFNLNRFKENFKINILSESANELV 72

Query: 102 FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLF 161
           F+MIGID  +ANA RRI+I+E+PTMAIEKV   NNTSI+QDEVLAHRLG+IPI+VDPR F
Sbjct: 73  FEMIGIDAPIANALRRIMISEIPTMAIEKVYIINNTSILQDEVLAHRLGMIPIKVDPRKF 132

Query: 162 KYSDKDAPNE----NNTIVFRLHARCER----GK-PRLTVKSEALTWLPNGSEFPLVSDK 221
            +     PN+     +T++F+L  +CE+    GK    T  S+ L W+P   +     ++
Sbjct: 133 NFK---LPNKEYTAEDTLIFQLKVKCEKDSVTGKIINETALSKHLIWVPTQDQ-----EE 192

Query: 222 SIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTH 281
             PN + +                     P + DI + +L PGQ I+++ +  K +G+ H
Sbjct: 193 MFPNEEDRP-------------------RPMEDDIPIMKLRPGQVIDIQCYCEKNIGREH 252

Query: 282 AKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRACT 341
            KWSPV TA YR+ P + + + I+ + A +L  KCP  VFDIED     +   ARP  CT
Sbjct: 253 IKWSPVCTASYRLQPVISVDKSIKGDKANQLLEKCPKKVFDIED---SGQVVAARPLDCT 312

Query: 342 LCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKC 384
           +CRECIR   +E+ V + RV+DHFIF IESTGAL    +F EA+KI  +KC
Sbjct: 313 MCRECIRDPEFEQNVKIERVRDHFIFSIESTGALKSREIFQEAIKIFIEKC 333

[Close]

BLAST of IVF0001399 vs. ExPASy Swiss-Prot
Match: O94616 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpc40 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 8.4e-64
Identity = 140/360 (38.89%), Postives = 206/360 (57.22%), Query Frame = 0


Query: 44  VELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFD 103
           V+  RT +   +D      ++ + G +     DN   LD F+ N K+ + +L  + + F+
Sbjct: 4   VDRSRTEISVLSDRVTDVGSVDFPGYY--FDEDNIWDLDKFKKNLKVSITSLDQETMVFE 63

Query: 104 MIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY 163
           + GID ++ANAFRRILIAE+PT+A E V   NNTSI+QDEVL+HR+GL+PI  DP +FK+
Sbjct: 64  ISGIDASIANAFRRILIAEIPTLAFEFVYIINNTSIIQDEVLSHRIGLVPISADPDMFKW 123

Query: 164 SDKDAPNEN------NTIVFRLHARCERGK---------PRLTVKSEA----LTWLPNGS 223
                P +       +T+VF L+ +CE  K          RL V SE     L W P G 
Sbjct: 124 FQHPLPGQEATHTDYDTVVFSLNKKCEFNKNAATDEKDPKRLYVNSEVYSGDLIWKPQGR 183

Query: 224 EFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHA 283
           +                             F+ N I   + DI++A+L PGQEI+LEAHA
Sbjct: 184 Q--------------------------EERFADNPIRVVNPDIVVAKLRPGQEIDLEAHA 243

Query: 284 VKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIED-IAGKKRA 343
           + G+G+ HAK+SPVATA YR+LP + +L  IE E A + ++  P  V ++E+   GKK+A
Sbjct: 244 ILGIGQDHAKFSPVATASYRLLPTIHILSPIEGEDAVKFQKCFPKGVIELEEGPDGKKQA 303

Query: 344 TVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKC 384
            VA  R  T+ REC+R   +  +V L RV+DH++F +ESTG + P+VLF +++ +L+ KC
Sbjct: 304 RVADVRKDTVSRECLRHPEFADKVQLGRVRDHYLFSVESTGIMKPDVLFIKSIAVLKSKC 335

[Close]

BLAST of IVF0001399 vs. ExPASy TrEMBL
Match: A0A1S4DX61 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucumis melo OX=3656 GN=LOC103491032 PE=3 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 3.2e-223
Identity = 389/391 (99.49%), Postives = 389/391 (99.49%), Query Frame = 0


Query: 1   MSGKDKNLHNMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60
           MSGKDKNLH MMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIH
Sbjct: 1   MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIH 60

Query: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120
           TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI
Sbjct: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120

Query: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180
           AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH
Sbjct: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180

Query: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI 240
           ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI
Sbjct: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI 240

Query: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA 300
           GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
Sbjct: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA 300

Query: 301 EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKI 360
           EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKI
Sbjct: 301 EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKI 360

Query: 361 ESTGALPPNVLFTEAVKILEDKCERLIAELS 392
           ESTGALPPNVLFTEAVKILEDKCERLIAELS
Sbjct: 361 ESTGALPPNVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of IVF0001399 vs. ExPASy TrEMBL
Match: A0A0A0L637 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucumis sativus OX=3659 GN=Csa_3G047880 PE=3 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 1.4e-207
Identity = 366/392 (93.37%), Postives = 378/392 (96.43%), Query Frame = 0


Query: 1   MSGKDKNLHNMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60
           MSGKDKNLHN M+ESESEQE V KEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH
Sbjct: 1   MSGKDKNLHN-MSESESEQEGVDKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60

Query: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120
           TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVI+LK DDIEFDMIGIDPALANAFRRILI
Sbjct: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILI 120

Query: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180
           +EVPTMAIEKVLFANNTSIVQDEVLAHRLGL+PIRVDPRLFKYSDKDAPNENNTIVFRLH
Sbjct: 121 SEVPTMAIEKVLFANNTSIVQDEVLAHRLGLVPIRVDPRLFKYSDKDAPNENNTIVFRLH 180

Query: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKL-PEFSKNS 240
           A CERGKPRLTV S+ALTWLPNGSEFPLVSDKS+ NSKP+TYTSFSCSQ+ L  EFS N 
Sbjct: 181 ACCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQNTLSKEFSNNP 240

Query: 241 IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDEL 300
           IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+L+EEIEDEL
Sbjct: 241 IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDEL 300

Query: 301 AEELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFK 360
           AEEL++KCPVNVFDIEDIAGKKRATVARPR CTLCRECIRGDAWEKRVALRRVKDHFIFK
Sbjct: 301 AEELEKKCPVNVFDIEDIAGKKRATVARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFK 360

Query: 361 IESTGALPPNVLFTEAVKILEDKCERLIAELS 392
           IESTGALPP VLFTEAVKILEDKCERLIAELS
Sbjct: 361 IESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of IVF0001399 vs. ExPASy TrEMBL
Match: A0A6J1L269 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucurbita maxima OX=3661 GN=LOC111498423 PE=3 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 2.4e-202
Identity = 355/392 (90.56%), Postives = 372/392 (94.90%), Query Frame = 0


Query: 1   MSGKDKNLHNMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60
           MSG+DKNLH+ M+ES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH
Sbjct: 1   MSGEDKNLHS-MSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60

Query: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120
           TDTIQYSGA+AS+G DNSLRLD+FR NFKIEVI+LK DD+EFDMIGIDP+LANAFRRILI
Sbjct: 61  TDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILI 120

Query: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180
           AEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPIRVDPRLF+YSDKD PNE NTIVFRLH
Sbjct: 121 AEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH 180

Query: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI 240
            RCERGKPRLT  SEALTWLPNGSEFPLVSDKS+ NSKP+TYTSFSCSQD LPEF+ N I
Sbjct: 181 VRCERGKPRLTATSEALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFANNPI 240

Query: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA 300
           GPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEIEDELA
Sbjct: 241 GPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA 300

Query: 301 EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFK 360
           EELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFK
Sbjct: 301 EELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFK 360

Query: 361 IESTGALPPNVLFTEAVKILEDKCERLIAELS 392
           IESTGALPP VLFTEAVKILEDKCERLIAELS
Sbjct: 361 IESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of IVF0001399 vs. ExPASy TrEMBL
Match: A0A6J1FDA3 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucurbita moschata OX=3662 GN=LOC111443051 PE=3 SV=1)

HSP 1 Score: 714.1 bits (1842), Expect = 3.1e-202
Identity = 354/392 (90.31%), Postives = 372/392 (94.90%), Query Frame = 0


Query: 1   MSGKDKNLHNMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60
           MSGKDKNLHN M+ES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH
Sbjct: 1   MSGKDKNLHN-MSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60

Query: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120
           TDTIQYSGA+AS+G DNSLRLD+FR NFKIEVI+LK DD+EFDMIGIDP+LANAFRRILI
Sbjct: 61  TDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILI 120

Query: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180
           AEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPIRVDPRLF+YSDKD PNE NTIVFRLH
Sbjct: 121 AEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH 180

Query: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI 240
            RCERGKPRLT  S+ALTWLPNGSEFPLVSDKS+ N+KP+TYTSFSCSQD LPEF+ N I
Sbjct: 181 VRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPI 240

Query: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA 300
           GPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLE+IEDELA
Sbjct: 241 GPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELA 300

Query: 301 EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFK 360
           EELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFK
Sbjct: 301 EELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFK 360

Query: 361 IESTGALPPNVLFTEAVKILEDKCERLIAELS 392
           IESTGALPP VLFTEAVKILEDKCERLIAELS
Sbjct: 361 IESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of IVF0001399 vs. ExPASy TrEMBL
Match: A0A6J1DXI7 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Momordica charantia OX=3673 GN=LOC111025015 PE=3 SV=1)

HSP 1 Score: 691.0 bits (1782), Expect = 2.8e-195
Identity = 341/381 (89.50%), Postives = 362/381 (95.01%), Query Frame = 0


Query: 12  MTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFA 71
           M++SESEQ   GKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGA+A
Sbjct: 1   MSDSESEQV-AGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYA 60

Query: 72  SMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKV 131
           SMG DNSLRLD FRNNFKIEVI+L  DDIEFDMIGIDPALANAFRRILIAEVPTMAIEKV
Sbjct: 61  SMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKV 120

Query: 132 LFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLT 191
           L ANNTS++QDEVLAHRLGLIPI VDPRLF+YSDKD PNE NTIVFRLHARCERGKPRLT
Sbjct: 121 LVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLT 180

Query: 192 VKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILAR 251
           V S+ LTWLPNGSEFPLVSDKS+PNSKP+TYTSFSCSQD LPEFS NSIGPKD+DII+AR
Sbjct: 181 VTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIAR 240

Query: 252 LGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNV 311
           LGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEV+L EEIEDELAEELK+KCPV+V
Sbjct: 241 LGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDV 300

Query: 312 FDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNV 371
           FDIEDIA GKKRA VARPR+CTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP V
Sbjct: 301 FDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEV 360

Query: 372 LFTEAVKILEDKCERLIAELS 392
           LFTEAVKILEDKCERLIAELS
Sbjct: 361 LFTEAVKILEDKCERLIAELS 380

[Close]

BLAST of IVF0001399 vs. NCBI nr
Match: XP_008449040.1 (PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis melo] >XP_008449041.1 PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis melo] >XP_008449042.1 PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis melo] >XP_016900567.1 PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis melo])

HSP 1 Score: 779 bits (2012), Expect = 3.42e-284
Identity = 389/391 (99.49%), Postives = 389/391 (99.49%), Query Frame = 0


Query: 1   MSGKDKNLHNMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60
           MSGKDKNLH MMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIH
Sbjct: 1   MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIH 60

Query: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120
           TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI
Sbjct: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120

Query: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180
           AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH
Sbjct: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180

Query: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI 240
           ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI
Sbjct: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI 240

Query: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA 300
           GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
Sbjct: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA 300

Query: 301 EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKI 360
           EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKI
Sbjct: 301 EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKI 360

Query: 361 ESTGALPPNVLFTEAVKILEDKCERLIAELS 391
           ESTGALPPNVLFTEAVKILEDKCERLIAELS
Sbjct: 361 ESTGALPPNVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of IVF0001399 vs. NCBI nr
Match: XP_004148257.1 (DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis sativus] >KGN56027.1 hypothetical protein Csa_010312 [Cucumis sativus])

HSP 1 Score: 727 bits (1877), Expect = 1.29e-263
Identity = 366/392 (93.37%), Postives = 378/392 (96.43%), Query Frame = 0


Query: 1   MSGKDKNLHNMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60
           MSGKDKNLHNM +ESESEQE V KEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH
Sbjct: 1   MSGKDKNLHNM-SESESEQEGVDKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60

Query: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120
           TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVI+LK DDIEFDMIGIDPALANAFRRILI
Sbjct: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILI 120

Query: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180
           +EVPTMAIEKVLFANNTSIVQDEVLAHRLGL+PIRVDPRLFKYSDKDAPNENNTIVFRLH
Sbjct: 121 SEVPTMAIEKVLFANNTSIVQDEVLAHRLGLVPIRVDPRLFKYSDKDAPNENNTIVFRLH 180

Query: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLP-EFSKNS 240
           A CERGKPRLTV S+ALTWLPNGSEFPLVSDKS+ NSKP+TYTSFSCSQ+ L  EFS N 
Sbjct: 181 ACCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQNTLSKEFSNNP 240

Query: 241 IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDEL 300
           IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+L+EEIEDEL
Sbjct: 241 IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDEL 300

Query: 301 AEELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFK 360
           AEEL++KCPVNVFDIEDIAGKKRATVARPR CTLCRECIRGDAWEKRVALRRVKDHFIFK
Sbjct: 301 AEELEKKCPVNVFDIEDIAGKKRATVARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFK 360

Query: 361 IESTGALPPNVLFTEAVKILEDKCERLIAELS 391
           IESTGALPP VLFTEAVKILEDKCERLIAELS
Sbjct: 361 IESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of IVF0001399 vs. NCBI nr
Match: XP_038903474.1 (DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida] >XP_038903475.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida] >XP_038903476.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida])

HSP 1 Score: 717 bits (1850), Expect = 1.61e-259
Identity = 359/391 (91.82%), Postives = 372/391 (95.14%), Query Frame = 0


Query: 1   MSGKDKNLHNMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60
           MSGKDK+LHNM ++SESEQE V KEGIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIH
Sbjct: 1   MSGKDKSLHNM-SDSESEQEGVAKEGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIH 60

Query: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120
           TDTIQYSGAFASMG DNSLRLD FRNNFKIEVI+LK DDIEFDMIGIDPALANAFRRILI
Sbjct: 61  TDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILI 120

Query: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180
           AEVPTMAIEKVL ANNTSIVQDEVLAHRLGL+PI VDPRLF+YSDKD PNE NTIVFRLH
Sbjct: 121 AEVPTMAIEKVLVANNTSIVQDEVLAHRLGLVPIHVDPRLFEYSDKDTPNEKNTIVFRLH 180

Query: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI 240
           A CERGK RLTV S+ALTWLPNGSEFPLVSDKS+ NSKP+TYTSFSCSQD LPEFS N I
Sbjct: 181 ACCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPI 240

Query: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA 300
           GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEI+DELA
Sbjct: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIKDELA 300

Query: 301 EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKI 360
           EELK+KCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD WEKRVALRRVKDHFIFKI
Sbjct: 301 EELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDVWEKRVALRRVKDHFIFKI 360

Query: 361 ESTGALPPNVLFTEAVKILEDKCERLIAELS 391
           ESTGALPP VLFTEAVKILEDKCERLIAELS
Sbjct: 361 ESTGALPPEVLFTEAVKILEDKCERLIAELS 390

[Close]

BLAST of IVF0001399 vs. NCBI nr
Match: XP_023005438.1 (DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima])

HSP 1 Score: 710 bits (1832), Expect = 9.27e-257
Identity = 355/392 (90.56%), Postives = 372/392 (94.90%), Query Frame = 0


Query: 1   MSGKDKNLHNMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60
           MSG+DKNLH+M +ES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH
Sbjct: 1   MSGEDKNLHSM-SESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60

Query: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120
           TDTIQYSGA+AS+G DNSLRLD+FR NFKIEVI+LK DD+EFDMIGIDP+LANAFRRILI
Sbjct: 61  TDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILI 120

Query: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180
           AEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPIRVDPRLF+YSDKD PNE NTIVFRLH
Sbjct: 121 AEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH 180

Query: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI 240
            RCERGKPRLT  SEALTWLPNGSEFPLVSDKS+ NSKP+TYTSFSCSQD LPEF+ N I
Sbjct: 181 VRCERGKPRLTATSEALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFANNPI 240

Query: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA 300
           GPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEIEDELA
Sbjct: 241 GPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA 300

Query: 301 EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFK 360
           EELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFK
Sbjct: 301 EELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFK 360

Query: 361 IESTGALPPNVLFTEAVKILEDKCERLIAELS 391
           IESTGALPP VLFTEAVKILEDKCERLIAELS
Sbjct: 361 IESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of IVF0001399 vs. NCBI nr
Match: XP_022936430.1 (DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata] >XP_022936440.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata] >XP_022936448.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata])

HSP 1 Score: 709 bits (1831), Expect = 1.32e-256
Identity = 354/392 (90.31%), Postives = 372/392 (94.90%), Query Frame = 0


Query: 1   MSGKDKNLHNMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60
           MSGKDKNLHNM +ES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH
Sbjct: 1   MSGKDKNLHNM-SESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 60

Query: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120
           TDTIQYSGA+AS+G DNSLRLD+FR NFKIEVI+LK DD+EFDMIGIDP+LANAFRRILI
Sbjct: 61  TDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILI 120

Query: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180
           AEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPIRVDPRLF+YSDKD PNE NTIVFRLH
Sbjct: 121 AEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH 180

Query: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI 240
            RCERGKPRLT  S+ALTWLPNGSEFPLVSDKS+ N+KP+TYTSFSCSQD LPEF+ N I
Sbjct: 181 VRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPI 240

Query: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA 300
           GPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLE+IEDELA
Sbjct: 241 GPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELA 300

Query: 301 EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFK 360
           EELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFK
Sbjct: 301 EELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFK 360

Query: 361 IESTGALPPNVLFTEAVKILEDKCERLIAELS 391
           IESTGALPP VLFTEAVKILEDKCERLIAELS
Sbjct: 361 IESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of IVF0001399 vs. TAIR 10
Match: AT1G60620.1 (RNA polymerase I subunit 43 )

HSP 1 Score: 487.3 bits (1253), Expect = 1.2e-137
Identity = 243/365 (66.58%), Postives = 292/365 (80.00%), Query Frame = 0


Query: 30  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFK 89
           I +LPDVP  LPPH+ELQRTRV CK D+ IH   I +SGA++SMG DNS+RL+NF  +FK
Sbjct: 23  IFDLPDVPTGLPPHLELQRTRVVCKKDSNIHPTAITFSGAYSSMGVDNSVRLENFSEDFK 82

Query: 90  IEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRL 149
           ++VI+L   D+ FDMIG+   +ANAFRRIL+AE+P+MAIEKV  ANNTS++QDEVLAHRL
Sbjct: 83  VDVISLTETDMVFDMIGVHAGIANAFRRILLAELPSMAIEKVYVANNTSVIQDEVLAHRL 142

Query: 150 GLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPL 209
           GLIPI  DPRLF+Y S+ D PNE NTIVF+LH +C +G PR  V +  L WLPNGSE  L
Sbjct: 143 GLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCLKGDPRRKVLTSELKWLPNGSE--L 202

Query: 210 VSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGM 269
           + +     + P+TYTSF+ SQD  PEF++N I P   DI++A+LGPGQEIELEAHAVKG+
Sbjct: 203 IKESGGSTTTPKTYTSFNHSQDSFPEFAENPIRPTLKDILIAKLGPGQEIELEAHAVKGI 262

Query: 270 GKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIA-GKKRATVAR 329
           GKTHAKWSPVATAWYRMLPEV+LL+E E + AEEL + CP  VFDIED+  G+KRATVAR
Sbjct: 263 GKTHAKWSPVATAWYRMLPEVVLLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATVAR 322

Query: 330 PRACTLCRECIR-GDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERL 389
           PR C+LCRECIR G  WE +V LRRVK+HFIF IESTG+ PP VLF EAVKILEDKCER+
Sbjct: 323 PRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPPEVLFNEAVKILEDKCERV 382

Query: 390 IAELS 392
           I+ELS
Sbjct: 383 ISELS 385

[Close]

BLAST of IVF0001399 vs. TAIR 10
Match: AT1G60850.2 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 459.1 bits (1180), Expect = 3.4e-129
Identity = 233/360 (64.72%), Postives = 279/360 (77.50%), Query Frame = 0


Query: 30  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGFDNSLRLDNFRNNF 89
           I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L NF +NF
Sbjct: 15  IDDLPDVPAGLPPHLKAQQTRVVSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNF 74

Query: 90  KIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHR 149
           K++V++L   D+EFDMIGID A ANAFRRILIAEVP+MAIEKVL A NTS++ DEVLAHR
Sbjct: 75  KVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSVIIDEVLAHR 134

Query: 150 LGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFP 209
           +GLIPI  DPRLF+Y S+ D  NE NTIVF+LH +C + +PRL V +  L WLPNGSE  
Sbjct: 135 MGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKVLTSDLKWLPNGSE-- 194

Query: 210 LVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKG 269
           L+ +     SKP+TYTSFSCSQD LPEF+ N I P D DI++A+L PGQEIELEAHAVKG
Sbjct: 195 LLRESENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKLAPGQEIELEAHAVKG 254

Query: 270 MGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIA-GKKRATVA 329
           +GKTHAKWSPV TAWYRM PEV+L  E+EDELAE L   CP NVFDIED+  GKKRATVA
Sbjct: 255 IGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVFDIEDMGKGKKRATVA 314

Query: 330 RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERL 387
           +PR CTLC+EC+R D     V L  VK+HFIF IESTG+LPP VLFTEAVKILE KCE +
Sbjct: 315 QPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAI 372

[Close]

BLAST of IVF0001399 vs. TAIR 10
Match: AT1G60850.1 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 459.1 bits (1180), Expect = 3.4e-129
Identity = 233/360 (64.72%), Postives = 279/360 (77.50%), Query Frame = 0


Query: 30  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGFDNSLRLDNFRNNF 89
           I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L NF +NF
Sbjct: 15  IDDLPDVPAGLPPHLKAQQTRVVSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNF 74

Query: 90  KIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHR 149
           K++V++L   D+EFDMIGID A ANAFRRILIAEVP+MAIEKVL A NTS++ DEVLAHR
Sbjct: 75  KVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSVIIDEVLAHR 134

Query: 150 LGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFP 209
           +GLIPI  DPRLF+Y S+ D  NE NTIVF+LH +C + +PRL V +  L WLPNGSE  
Sbjct: 135 MGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKVLTSDLKWLPNGSE-- 194

Query: 210 LVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKG 269
           L+ +     SKP+TYTSFSCSQD LPEF+ N I P D DI++A+L PGQEIELEAHAVKG
Sbjct: 195 LLRESENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKLAPGQEIELEAHAVKG 254

Query: 270 MGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIA-GKKRATVA 329
           +GKTHAKWSPV TAWYRM PEV+L  E+EDELAE L   CP NVFDIED+  GKKRATVA
Sbjct: 255 IGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVFDIEDMGKGKKRATVA 314

Query: 330 RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERL 387
           +PR CTLC+EC+R D     V L  VK+HFIF IESTG+LPP VLFTEAVKILE KCE +
Sbjct: 315 QPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAI 372

[Close]

BLAST of IVF0001399 vs. TAIR 10
Match: AT1G60850.3 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 333.2 bits (853), Expect = 2.8e-91
Identity = 167/262 (63.74%), Postives = 204/262 (77.86%), Query Frame = 0


Query: 30  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGFDNSLRLDNFRNNF 89
           I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L NF +NF
Sbjct: 15  IDDLPDVPAGLPPHLKAQQTRVVSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNF 74

Query: 90  KIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHR 149
           K++V++L   D+EFDMIGID A ANAFRRILIAEVP+MAIEKVL A NTS++ DEVLAHR
Sbjct: 75  KVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSVIIDEVLAHR 134

Query: 150 LGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFP 209
           +GLIPI  DPRLF+Y S+ D  NE NTIVF+LH +C + +PRL V +  L WLPNGSE  
Sbjct: 135 MGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKVLTSDLKWLPNGSE-- 194

Query: 210 LVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKG 269
           L+ +     SKP+TYTSFSCSQD LPEF+ N I P D DI++A+L PGQEIELEAHAVKG
Sbjct: 195 LLRESENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKLAPGQEIELEAHAVKG 254

Query: 270 MGKTHAKWSPVATAWYRMLPEV 290
           +GKTHAKWSPV TAWYRM PEV
Sbjct: 255 IGKTHAKWSPVGTAWYRMHPEV 274

[Close]

BLAST of IVF0001399 vs. TAIR 10
Match: AT2G15400.1 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 139.8 bits (351), Expect = 4.6e-33
Identity = 101/311 (32.48%), Postives = 156/311 (50.16%), Query Frame = 0


Query: 90  IEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRL 149
           +++  LK D  +F++   D ++ANA RR++I+EVPTMAI  V    N+S++ DE +A RL
Sbjct: 12  VKIRELKDDYAKFELRETDVSMANALRRVMISEVPTMAIHLVKIEVNSSVLNDEFIAQRL 71

Query: 150 GLIPIRVDPRLFKYSDKDAPNENN-------TIVFRLHARCERGKPRLTVKSEALTWLPN 209
            LIP+  +  +     +D  + N        ++ F L A+C   +  L V S  L     
Sbjct: 72  SLIPLTSERAMSMRFCQDCEDCNGDEHCEFCSVEFPLSAKCVTDQ-TLDVTSRDLY---- 131

Query: 210 GSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEA 269
                     + P   P  +TS S + D            +   II+A+L  GQE++L+A
Sbjct: 132 ---------SADPTVTPVDFTSNSSTSD----------SSEHKGIIIAKLRRGQELKLKA 191

Query: 270 HAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELK----RKCPVNVFDIEDIA 329
            A KG+GK HAKWSP AT  Y   P++++ EE+ + L +E K       P  VF I+ + 
Sbjct: 192 LARKGIGKDHAKWSPAATVTYMYEPDIIINEEMMNTLTDEEKIDLIESSPTKVFGIDPVT 251

Query: 330 GKKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFKIESTGALPPNVLFTEA 387
           G  +  V  P A T   E I + +A  K   + +    D F+F +ESTGAL  + L   A
Sbjct: 252 G--QVVVVDPEAYTYDEEVIKKAEAMGKPGLIEIHPKHDSFVFTVESTGALKASQLVLNA 296

The following BLAST results are available for this feature:

BLAST of IVF0001399 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32L22	6.4e-80	46.99	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Bos taurus OX=9913 GN=PO...	[more]
O15160	7.1e-79	44.75	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Homo sapiens OX=9606 GN=...	[more]
P52432	6.0e-78	46.65	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Mus musculus OX=10090 GN...	[more]
Q54SN4	2.9e-72	42.17	DNA-directed RNA polymerases I and III subunit rpac1 OS=Dictyostelium discoideum...	[more]
O94616	8.4e-64	38.89	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Schizosaccharomyces pomb...	[more]

BLAST of IVF0001399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DX61	3.2e-223	99.49	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0L637	1.4e-207	93.37	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucumis sativus OX=3659 ...	[more]
A0A6J1L269	2.4e-202	90.56	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1FDA3	3.1e-202	90.31	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1DXI7	2.8e-195	89.50	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Momordica charantia OX=3...	[more]

BLAST of IVF0001399 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449040.1	3.42e-284	99.49	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis melo] >...	[more]
XP_004148257.1	1.29e-263	93.37	DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis sativus] >KGN56027...	[more]
XP_038903474.1	1.61e-259	91.82	DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispi...	[more]
XP_023005438.1	9.27e-257	90.56	DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima]	[more]
XP_022936430.1	1.32e-256	90.31	DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata] >XP_02...	[more]

BLAST of IVF0001399 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60620.1	1.2e-137	66.58	RNA polymerase I subunit 43	[more]
AT1G60850.2	3.4e-129	64.72	DNA-directed RNA polymerase family protein	[more]
AT1G60850.1	3.4e-129	64.72	DNA-directed RNA polymerase family protein	[more]
AT1G60850.3	2.8e-91	63.74	DNA-directed RNA polymerase family protein	[more]
AT2G15400.1	4.6e-33	32.48	DNA-directed RNA polymerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 376..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11800	DNA-DIRECTED RNA POLYMERASE	coord: 24..391
None	No IPR available	PANTHER	PTHR11800:SF14	BNAA01G22480D PROTEIN	coord: 24..391
IPR011263	DNA-directed RNA polymerase, RpoA/D/Rpb3-type	SMART	SM00662	rpoldneu2	coord: 99..389 e-value: 1.1E-105 score: 367.1
IPR011263	DNA-directed RNA polymerase, RpoA/D/Rpb3-type	PFAM	PF01193	RNA_pol_L	coord: 101..383 e-value: 1.3E-25 score: 89.9
IPR036643	DNA-directed RNA polymerase, insert domain superfamily	GENE3D	2.170.120.12		coord: 125..273 e-value: 3.4E-104 score: 350.1
IPR036643	DNA-directed RNA polymerase, insert domain superfamily	SUPERFAMILY	56553	Insert subdomain of RNA polymerase alpha subunit	coord: 124..277
IPR011262	DNA-directed RNA polymerase, insert domain	PFAM	PF01000	RNA_pol_A_bac	coord: 132..276 e-value: 3.1E-22 score: 79.1
IPR036603	RNA polymerase, RBP11-like subunit	GENE3D	3.30.1360.10		coord: 90..382 e-value: 3.4E-104 score: 350.1
IPR036603	RNA polymerase, RBP11-like subunit	SUPERFAMILY	55257	RBP11-like subunits of RNA polymerase	coord: 86..390
IPR001514	DNA-directed RNA polymerase, 30-40kDa subunit, conserved site	PROSITE	PS00446	RNA_POL_D_30KD	coord: 113..153
IPR033901	DNA-directed RNA polymerases I and III subunit AC40	CDD	cd07032	RNAP_I_II_AC40	coord: 88..389 e-value: 2.52766E-136 score: 389.261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001399.1	IVF0001399.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006360	transcription by RNA polymerase I
biological_process	GO:0006383	transcription by RNA polymerase III
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005736	RNA polymerase I complex
cellular_component	GO:0005666	RNA polymerase III complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0001054	RNA polymerase I activity
molecular_function	GO:0001056	RNA polymerase III activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity