IVF0001398 (gene) Melon (IVF77) v1

Overview
NameIVF0001398
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 31640810 .. 31641094 (-)
RNA-Seq ExpressionIVF0001398
SyntenyIVF0001398
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGACAAACTGGGGTTTTACAGGTGGGTCCCCTGATTGAGAATCGACCAACCATGCTTGCTAATTGGGAATCTCTCGGCTATCCAAAGGCGTGGCCCTCCAAATTCACAGGTCTAACTCATCCCTTTCCCTAACTATTGTTTTCTAAAAATTTATGGCCCAAACATATCACGCAGAGAGATTCGTGCTGTCTAGGCCATTCATTCCTCGAGAAGATGCCATTATTTAGGCCTTTAATGGTGGTTGTTACATCCAGTTCCTTCATTTATAGACACCACTGA

mRNA sequence

ATGTTTGGACAAACTGGGGTTTTACAGGTGGGTCCCCTGATTGAGAATCGACCAACCATGCTTGCTAATTGGGAATCTCTCGGCTATCCAAAGGCGTGGCCCTCCAAATTCACAGGCCATTCATTCCTCGAGAAGATGCCATTATTTAGGCCTTTAATGGTGGTTGTTACATCCAGTTCCTTCATTTATAGACACCACTGA

Coding sequence (CDS)

ATGTTTGGACAAACTGGGGTTTTACAGGTGGGTCCCCTGATTGAGAATCGACCAACCATGCTTGCTAATTGGGAATCTCTCGGCTATCCAAAGGCGTGGCCCTCCAAATTCACAGGCCATTCATTCCTCGAGAAGATGCCATTATTTAGGCCTTTAATGGTGGTTGTTACATCCAGTTCCTTCATTTATAGACACCACTGA

Protein sequence

MFGQTGVLQVGPLIENRPTMLANWESLGYPKAWPSKFTGHSFLEKMPLFRPLMVVVTSSSFIYRHH
Homology
[Close]
BLAST of IVF0001398 vs. ExPASy TrEMBL
Match: A0A0A0L9Y4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732430 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-30
Identity = 64/66 (96.97%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MFGQTGVLQVGPLIENRPTMLANWESLGYPKAWPSKFTGHSFLEKMPLFRPLMVVVTSSS 60
          MFGQTGVLQVGP+IENRPTMLANWESLGYPKAWPSKFTGHSFLE+MPLFRPLMVVVTSSS
Sbjct: 1  MFGQTGVLQVGPVIENRPTMLANWESLGYPKAWPSKFTGHSFLERMPLFRPLMVVVTSSS 60

Query: 61 FIYRHH 67
          FIYRHH
Sbjct: 61 FIYRHH 66

[Close]
BLAST of IVF0001398 vs. NCBI nr
Match: KGN58785.1 (hypothetical protein Csa_001275 [Cucumis sativus])

HSP 1 Score: 139 bits (350), Expect = 1.63e-41
Identity = 64/66 (96.97%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MFGQTGVLQVGPLIENRPTMLANWESLGYPKAWPSKFTGHSFLEKMPLFRPLMVVVTSSS 60
          MFGQTGVLQVGP+IENRPTMLANWESLGYPKAWPSKFTGHSFLE+MPLFRPLMVVVTSSS
Sbjct: 1  MFGQTGVLQVGPVIENRPTMLANWESLGYPKAWPSKFTGHSFLERMPLFRPLMVVVTSSS 60

Query: 61 FIYRHH 66
          FIYRHH
Sbjct: 61 FIYRHH 66

The following BLAST results are available for this feature:
BLAST of IVF0001398 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0001398 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9Y41.4e-3096.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732430 PE=4 SV=1[more]
BLAST of IVF0001398 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58785.11.63e-4196.97hypothetical protein Csa_001275 [Cucumis sativus][more]
BLAST of IVF0001398 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001398.1IVF0001398.1mRNA