IVF0001308 (gene) Melon (IVF77) v1

Overview


Name	IVF0001308
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	F-box protein SKIP22-like
Location	chr07: 24430090 .. 24432098 (+)
RNA-Seq Expression	IVF0001308
Synteny	IVF0001308

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAACGGAAGGTCCCGTTTCCAGACGCCCAAATCAACCAACCGCCTTCTGTCGTCTCGCAGATTGAAATCCTCACACTCTTCCTCTTGGAGCCCTAAATTTGAATCGGAAAAATTTTCTGACGACAACTCCCAATTTCTAACCATGAAATTGAGGCTCAGATCCCTAGAATCCAAACAAACCCTCAGAATCGAAGTCCCTGATCCATCCACTCTCAATCACCTCAAACAGACGCTCCTCCAAACACTCTCTTCTTCCTTTTCCGCTGATTCTCTTCACCTCTCCCTCAATCGGAAGGACGAGCTCCAAGCGTCCTCGCCGGAGGATTCCTTGCACTCCTTGGGTATTACTTCAGGTGACCTTGTTTTCTTCACTTTCAAACCTTCCGAGTTTTCGTCTCTCGGAGCGAGAGCTACGCCAATTCAATCTTTTCAACCTCCTCCTCTTTCTGGTTCTTCTTCGCTAGTTTCGTCTTCCTCGCTACCGCAGGTTAAAGGAAAGCAACTTCTGGGTATTGATTGTGATCTTAAAAAACCTAGGTTGGAGAATTCCGAGCCTGAATCCATGGTACCCGATTCATCGGGTGCAGAATTGACTACATCTAGCATGATCGAGGAGTCGGATTGTGAAGAAATGGAGGTTGAAGAAGAGCCAACCGTAGTTGTGGAAAAGAAATGTTCGAGGCCGATCTTTTTGAGGAGAGTTCTGAAGGAGGAGTTAGGCTATGATCGTAATGCTCACAAACTTTTGGTAACTGCCGTTCACGCTGTACTTTTGGAGTCTGGATTTGTGCTGATTAATCCTAATTTAGGTTTTGAGGACAGTCCTTTCCGTATGCCGGAAGATTGGCCTTCCCCGTCGTTTACGATGTCGCTTTGGTACACTCTACCTGAACTTTTGACTAAGAGGGGAAAGAATTCTACCATGACTGAAGTAGTATTATTGAAGTTTCAGAGTTTAGGGTACTTTGTTAATGTTTATGGGTCTCTTAACTGCAGTAGAGGATCTAGTGTGTATCGTGTATCTTTAGATGAGAGAAAATTTGCACCAAATCTTGATCTTATTTGGGTGGATTCAGTATCCAACTACATCATGGATGAAAAGGAAGGAAACCCAGAGAAACAAGTTTTTGAATTCTGGAAGATAGTGAAGGATGCTCTTGCATTGCCACTCTTGATTGATATCTGTGAAAAGACTGGTTTACCACCTCCTGCAAGCTTTATGCTACTTCCAGCTGATGTGAAGCTTAAGATTTTAGAGGCTCTTCCTGGTGTGGACATTGCAAGAGTTGAATGTGTGTGTACTGAATTGCGTTACTTGGCCTCCAGCAATGAGCTGTGGAAGATGAAGTTCAATCAAGAGTTTGGTTTAGAGGATGGTGTTTCAGGAAACAGGGTTTGGAAAACAAAATTTGTTGAATATTATGAAAGAGAAAAGCAGAGAAACAGGAGAACTAGCAATATGAGAGATGCCATTAGTTTTGGGCGGCATCGACGACCCCCTTATCCTTTCCCAGTTCCTCATATAATTGGGGGAGATTATGATATTGTGTCTGGTATTAGACTTCCTGTATATGGAGTTCCTGGACAATCATTACCTCGGATTCCACGGCGACACGCTGTCATACCACATTATGATTTGAGAGGACGATGAGTACCGAATCTGAGTTCATAGGCAGTTTTTGTTGTAGTTTTGGGTGTTTTACGCAAAGGACAAGGTGTTAGGAATCTTGCCAGAATGGAGATATCAGGTTAGGCCATGAATCTTATGTAAATATAGCTTGCCTGATTGCCTCAAACGCTCTTTGATGTTTTTTTTTAATCGTTCACTTATTACTGAAGGATTTTAATAAGTAATAAGTTAAGTTTAACTGCAAACTTGAATATCATCAGTTTTGTGTTTAAGCTGAGAAGTTTATTATATATGATTATGCTGAATTAAACATGGCCTTCTGAAAGTTCTACAATTGTTGATTGTTTTTCGATGGAATGATTTTAGTAAGTTGGGC

mRNA sequence

ATAAAACGGAAGGTCCCGTTTCCAGACGCCCAAATCAACCAACCGCCTTCTGTCGTCTCGCAGATTGAAATCCTCACACTCTTCCTCTTGGAGCCCTAAATTTGAATCGGAAAAATTTTCTGACGACAACTCCCAATTTCTAACCATGAAATTGAGGCTCAGATCCCTAGAATCCAAACAAACCCTCAGAATCGAAGTCCCTGATCCATCCACTCTCAATCACCTCAAACAGACGCTCCTCCAAACACTCTCTTCTTCCTTTTCCGCTGATTCTCTTCACCTCTCCCTCAATCGGAAGGACGAGCTCCAAGCGTCCTCGCCGGAGGATTCCTTGCACTCCTTGGGTATTACTTCAGGTGACCTTGTTTTCTTCACTTTCAAACCTTCCGAGTTTTCGTCTCTCGGAGCGAGAGCTACGCCAATTCAATCTTTTCAACCTCCTCCTCTTTCTGGTTCTTCTTCGCTAGTTTCGTCTTCCTCGCTACCGCAGGTTAAAGGAAAGCAACTTCTGGGTATTGATTGTGATCTTAAAAAACCTAGGTTGGAGAATTCCGAGCCTGAATCCATGGTACCCGATTCATCGGGTGCAGAATTGACTACATCTAGCATGATCGAGGAGTCGGATTGTGAAGAAATGGAGGTTGAAGAAGAGCCAACCGTAGTTGTGGAAAAGAAATGTTCGAGGCCGATCTTTTTGAGGAGAGTTCTGAAGGAGGAGTTAGGCTATGATCGTAATGCTCACAAACTTTTGGTAACTGCCGTTCACGCTGTACTTTTGGAGTCTGGATTTGTGCTGATTAATCCTAATTTAGGTTTTGAGGACAGTCCTTTCCGTATGCCGGAAGATTGGCCTTCCCCGTCGTTTACGATGTCGCTTTGGTACACTCTACCTGAACTTTTGACTAAGAGGGGAAAGAATTCTACCATGACTGAAGTAGTATTATTGAAGTTTCAGAGTTTAGGGTACTTTGTTAATGTTTATGGGTCTCTTAACTGCAGTAGAGGATCTAGTGTGTATCGTGTATCTTTAGATGAGAGAAAATTTGCACCAAATCTTGATCTTATTTGGGTGGATTCAGTATCCAACTACATCATGGATGAAAAGGAAGGAAACCCAGAGAAACAAGTTTTTGAATTCTGGAAGATAGTGAAGGATGCTCTTGCATTGCCACTCTTGATTGATATCTGTGAAAAGACTGGTTTACCACCTCCTGCAAGCTTTATGCTACTTCCAGCTGATGTGAAGCTTAAGATTTTAGAGGCTCTTCCTGGTGTGGACATTGCAAGAGTTGAATGTGTGTGTACTGAATTGCGTTACTTGGCCTCCAGCAATGAGCTGTGGAAGATGAAGTTCAATCAAGAGTTTGGTTTAGAGGATGGTGTTTCAGGAAACAGGGTTTGGAAAACAAAATTTGTTGAATATTATGAAAGAGAAAAGCAGAGAAACAGGAGAACTAGCAATATGAGAGATGCCATTAGTTTTGGGCGGCATCGACGACCCCCTTATCCTTTCCCAGTTCCTCATATAATTGGGGGAGATTATGATATTGTGTCTGGTATTAGACTTCCTGTATATGGAGTTCCTGGACAATCATTACCTCGGATTCCACGGCGACACGCTGTCATACCACATTATGATTTGAGAGGACGATGAGTACCGAATCTGAGTTCATAGGCAGTTTTTGTTGTAGTTTTGGGTGTTTTACGCAAAGGACAAGGTGTTAGGAATCTTGCCAGAATGGAGATATCAGGTTAGGCCATGAATCTTATGTAAATATAGCTTGCCTGATTGCCTCAAACGCTCTTTGATGTTTTTTTTTAATCGTTCACTTATTACTGAAGGATTTTAATAAGTAATAAGTTAAGTTTAACTGCAAACTTGAATATCATCAGTTTTGTGTTTAAGCTGAGAAGTTTATTATATATGATTATGCTGAATTAAACATGGCCTTCTGAAAGTTCTACAATTGTTGATTGTTTTTCGATGGAATGATTTTAGTAAGTTGGGC

Coding sequence (CDS)

ATGAAATTGAGGCTCAGATCCCTAGAATCCAAACAAACCCTCAGAATCGAAGTCCCTGATCCATCCACTCTCAATCACCTCAAACAGACGCTCCTCCAAACACTCTCTTCTTCCTTTTCCGCTGATTCTCTTCACCTCTCCCTCAATCGGAAGGACGAGCTCCAAGCGTCCTCGCCGGAGGATTCCTTGCACTCCTTGGGTATTACTTCAGGTGACCTTGTTTTCTTCACTTTCAAACCTTCCGAGTTTTCGTCTCTCGGAGCGAGAGCTACGCCAATTCAATCTTTTCAACCTCCTCCTCTTTCTGGTTCTTCTTCGCTAGTTTCGTCTTCCTCGCTACCGCAGGTTAAAGGAAAGCAACTTCTGGGTATTGATTGTGATCTTAAAAAACCTAGGTTGGAGAATTCCGAGCCTGAATCCATGGTACCCGATTCATCGGGTGCAGAATTGACTACATCTAGCATGATCGAGGAGTCGGATTGTGAAGAAATGGAGGTTGAAGAAGAGCCAACCGTAGTTGTGGAAAAGAAATGTTCGAGGCCGATCTTTTTGAGGAGAGTTCTGAAGGAGGAGTTAGGCTATGATCGTAATGCTCACAAACTTTTGGTAACTGCCGTTCACGCTGTACTTTTGGAGTCTGGATTTGTGCTGATTAATCCTAATTTAGGTTTTGAGGACAGTCCTTTCCGTATGCCGGAAGATTGGCCTTCCCCGTCGTTTACGATGTCGCTTTGGTACACTCTACCTGAACTTTTGACTAAGAGGGGAAAGAATTCTACCATGACTGAAGTAGTATTATTGAAGTTTCAGAGTTTAGGGTACTTTGTTAATGTTTATGGGTCTCTTAACTGCAGTAGAGGATCTAGTGTGTATCGTGTATCTTTAGATGAGAGAAAATTTGCACCAAATCTTGATCTTATTTGGGTGGATTCAGTATCCAACTACATCATGGATGAAAAGGAAGGAAACCCAGAGAAACAAGTTTTTGAATTCTGGAAGATAGTGAAGGATGCTCTTGCATTGCCACTCTTGATTGATATCTGTGAAAAGACTGGTTTACCACCTCCTGCAAGCTTTATGCTACTTCCAGCTGATGTGAAGCTTAAGATTTTAGAGGCTCTTCCTGGTGTGGACATTGCAAGAGTTGAATGTGTGTGTACTGAATTGCGTTACTTGGCCTCCAGCAATGAGCTGTGGAAGATGAAGTTCAATCAAGAGTTTGGTTTAGAGGATGGTGTTTCAGGAAACAGGGTTTGGAAAACAAAATTTGTTGAATATTATGAAAGAGAAAAGCAGAGAAACAGGAGAACTAGCAATATGAGAGATGCCATTAGTTTTGGGCGGCATCGACGACCCCCTTATCCTTTCCCAGTTCCTCATATAATTGGGGGAGATTATGATATTGTGTCTGGTATTAGACTTCCTGTATATGGAGTTCCTGGACAATCATTACCTCGGATTCCACGGCGACACGCTGTCATACCACATTATGATTTGAGAGGACGATGA

Protein sequence

MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPEDSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQLLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKFAPNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWKTKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVPGQSLPRIPRRHAVIPHYDLRGR

Homology

[Close]

BLAST of IVF0001308 vs. ExPASy Swiss-Prot
Match: Q9ZUB8 (F-box protein SKIP22 OS=Arabidopsis thaliana OX=3702 GN=SKIP22 PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.0e-65
Identity = 173/436 (39.68%), Postives = 247/436 (56.65%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLR  E+++TL++E+ D  TL+ L++ +  T+ S     S+HLSLNRKDEL   SPE
Sbjct: 1   MKLRLRHHETRETLKLELADADTLHDLRRRINPTVPS-----SVHLSLNRKDELITPSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           D+L SLG+ SGDL++F+ +  E S+               L  S ++ S S   Q     
Sbjct: 61  DTLRSLGLISGDLIYFSLEAGESSNW-------------KLRDSETVASQSESNQTSVHD 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180
            +G       P    S P + V D  G +++     E  D E++++  E      K+ S 
Sbjct: 121 SIGFAEVDVVPDQAKSNPNTSVEDPEG-DISGMEGPEPMDVEQLDM--ELAAAGSKRLSE 180

Query: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240
           P FL+ +L E+ G D +    L  +VHAV+LESGFVL+N         F   ++      
Sbjct: 181 PFFLKNILLEKSG-DTSELTTLALSVHAVMLESGFVLLNHG----SDKFNFSKE----LL 240

Query: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300
           T+SL YTLPEL+  + K++   E V +KFQ+LG  V VYG++  S G     ++LD+R+F
Sbjct: 241 TVSLRYTLPELI--KSKDTNTIESVSVKFQNLGPVVVVYGTVGGSSGR--VHMNLDKRRF 300

Query: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360
            P +DL+   S S+   +E   +  ++VF FW++VKD L +PLLI IC+K GL PP   M
Sbjct: 301 VPVIDLVMDTSTSD---EEGSSSIYREVFMFWRMVKDRLVIPLLIGICDKAGLEPPPCLM 360

Query: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFG----LEDGVSGN 420
            LP ++KLKILE LPGV I  + CVCTE+RYLAS N+LWK K  +E       E G S N
Sbjct: 361 RLPTELKLKILELLPGVSIGNMACVCTEMRYLASDNDLWKQKCLEEVNNFVVTEAGDSVN 396

Query: 421 RVWKTKFVEYYEREKQ 433
             WK +F  ++ R+KQ
Sbjct: 421 --WKARFATFW-RQKQ 396

[Close]

BLAST of IVF0001308 vs. ExPASy Swiss-Prot
Match: Q9ZUB9 (Putative F-box protein At1g23770 OS=Arabidopsis thaliana OX=3702 GN=At1g23770 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-42
Identity = 123/309 (39.81%), Postives = 179/309 (57.93%), Query Frame = 0


Query: 166 VEEEPTVVVEKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFE 225
           ++ E      K+ S P FL+ VL E+ G D +    L  +VHAV+LESGFVL++   G +
Sbjct: 31  MDVELAAAKSKRLSEPFFLKNVLLEKSG-DTSDLTALALSVHAVMLESGFVLLDH--GSD 90

Query: 226 DSPFRMPEDWPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSL--N 285
              F           ++SL YTLPEL+T++  N+   E V ++FQ++G  + VYG+L  +
Sbjct: 91  KFSF------SKKLLSVSLRYTLPELITRKDTNT--VESVTVRFQNIGPRLVVYGTLGGS 150

Query: 286 CSRGSSVYRVSLDERKFAPNLDLIWVDSVSNYIMDEKEGNPE--KQVFEFWKIVKDALAL 345
           C R   V+  SLD+ +F P +DL+ VD+    +  EK+G+    ++VF  W++VKD L +
Sbjct: 151 CKR---VHMTSLDKSRFLPVIDLV-VDT----LKFEKQGSSSYYREVFMLWRMVKDELVI 210

Query: 346 PLLIDICEKTGLPPPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKM 405
           PLLI +C+K GL  P   MLLP ++KLKILE LPGV I  + CVCTE+RYLAS N+LW+ 
Sbjct: 211 PLLIGLCDKAGLESPPCLMLLPTELKLKILELLPGVSIGYMACVCTEMRYLASDNDLWEH 270

Query: 406 KFNQEFGLEDG-------VSGNRVWKTKFVEYYEREK-----QRNR--RTSNMRDAISF- 455
           K      LE+G        +G+  WK KF  ++ R++     +RN   + SN R    F 
Sbjct: 271 KC-----LEEGKGCLWKLYTGDVDWKRKFASFWRRKRLDLLARRNPPIKKSNPRFPTLFP 315

[Close]

BLAST of IVF0001308 vs. ExPASy Swiss-Prot
Match: O64600 (F-box protein At1g70360 OS=Arabidopsis thaliana OX=3702 GN=At1g70360 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.0e-21
Identity = 72/196 (36.73%), Postives = 104/196 (53.06%), Query Frame = 0


Query: 201 LLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSFTMSLWYTLPELLTKRGKNST 260
           +++  VHAV+LESGFVL +P     DS  R      S    +SL YTLP +    G N  
Sbjct: 12  IVIMTVHAVMLESGFVLFDP-----DSSMRFSF---SKKTLVSLNYTLPSVKGIVGLNFE 71

Query: 261 MTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKFAPNLDLIWVDSVSNYIMDEK 320
              +V                     GS V  VS+D+R +   +DL+    +     DE+
Sbjct: 72  KEAIV---------------------GSFVRVVSIDKRSYVHIVDLL----METLKSDEE 131

Query: 321 EG--NPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKILEALPGVD 380
           E   + + +V  +W+++KD +  PLL+D+C KTGL  P  F+ LP ++K KILE+LPGVD
Sbjct: 132 EDTLSIDCKVLVWWRMIKDGIVTPLLVDLCYKTGLELPPCFISLPRELKHKILESLPGVD 174

Query: 381 IARVECVCTELRYLAS 395
           I  + CV +ELR +AS
Sbjct: 192 IGTLACVSSELRDMAS 174

[Close]

BLAST of IVF0001308 vs. ExPASy TrEMBL
Match: A0A5D3E231 (F-box protein SKIP22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00380 PE=4 SV=1)

HSP 1 Score: 995.0 bits (2571), Expect = 1.2e-286
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE
Sbjct: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ
Sbjct: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180
           LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR
Sbjct: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180

Query: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240
           PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF
Sbjct: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240

Query: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300
           TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF
Sbjct: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300

Query: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360
           APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM
Sbjct: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360

Query: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420
           LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK
Sbjct: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420

Query: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480
           TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP
Sbjct: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480

Query: 481 GQSLPRIPRRHAVIPHYDLRGR 503
           GQSLPRIPRRHAVIPHYDLRGR
Sbjct: 481 GQSLPRIPRRHAVIPHYDLRGR 502

[Close]

BLAST of IVF0001308 vs. ExPASy TrEMBL
Match: E5GBH4 (F-box family protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 995.0 bits (2571), Expect = 1.2e-286
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE
Sbjct: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ
Sbjct: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180
           LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR
Sbjct: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180

Query: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240
           PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF
Sbjct: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240

Query: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300
           TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF
Sbjct: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300

Query: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360
           APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM
Sbjct: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360

Query: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420
           LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK
Sbjct: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420

Query: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480
           TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP
Sbjct: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480

Query: 481 GQSLPRIPRRHAVIPHYDLRGR 503
           GQSLPRIPRRHAVIPHYDLRGR
Sbjct: 481 GQSLPRIPRRHAVIPHYDLRGR 502

[Close]

BLAST of IVF0001308 vs. ExPASy TrEMBL
Match: A0A1S3BZC5 (F-box protein SKIP22-like OS=Cucumis melo OX=3656 GN=LOC103494830 PE=4 SV=1)

HSP 1 Score: 995.0 bits (2571), Expect = 1.2e-286
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE
Sbjct: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ
Sbjct: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180
           LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR
Sbjct: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180

Query: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240
           PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF
Sbjct: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240

Query: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300
           TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF
Sbjct: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300

Query: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360
           APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM
Sbjct: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360

Query: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420
           LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK
Sbjct: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420

Query: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480
           TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP
Sbjct: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480

Query: 481 GQSLPRIPRRHAVIPHYDLRGR 503
           GQSLPRIPRRHAVIPHYDLRGR
Sbjct: 481 GQSLPRIPRRHAVIPHYDLRGR 502

[Close]

BLAST of IVF0001308 vs. ExPASy TrEMBL
Match: A0A5A7TQD4 (F-box protein SKIP22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00380 PE=4 SV=1)

HSP 1 Score: 992.3 bits (2564), Expect = 7.5e-286
Identity = 500/502 (99.60%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLRSLESKQTLRIEVPDPSTLNHLK+TLLQTLSSSFSADSLHLSLNRKDELQASSPE
Sbjct: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKRTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGK+
Sbjct: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKE 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180
           LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR
Sbjct: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180

Query: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240
           PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF
Sbjct: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240

Query: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300
           TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF
Sbjct: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300

Query: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360
           APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM
Sbjct: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360

Query: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420
           LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK
Sbjct: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420

Query: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480
           TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP
Sbjct: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480

Query: 481 GQSLPRIPRRHAVIPHYDLRGR 503
           GQSLPRIPRRHAVIPHYDLRGR
Sbjct: 481 GQSLPRIPRRHAVIPHYDLRGR 502

[Close]

BLAST of IVF0001308 vs. ExPASy TrEMBL
Match: A0A0A0KT22 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000590 PE=4 SV=1)

HSP 1 Score: 917.1 bits (2369), Expect = 3.1e-263
Identity = 467/502 (93.03%), Postives = 481/502 (95.82%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLRSLES Q+LRIEVPDPSTL+HLK TLLQTLSSSFSADSLHLSLNRKDELQASSPE
Sbjct: 1   MKLRLRSLESNQSLRIEVPDPSTLDHLKHTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           DSLHSLGITSGDL+FFTFKP EFSSLG  AT IQSFQ PPL GSSS VSSSSLPQV+GKQ
Sbjct: 61  DSLHSLGITSGDLLFFTFKPPEFSSLG--ATSIQSFQ-PPLPGSSSQVSSSSLPQVEGKQ 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180
           LLGIDCDLKKPRLENSEPES+VP+SS AELT  SMIEESDCEEMEVEEEPTVVVE +CSR
Sbjct: 121 LLGIDCDLKKPRLENSEPESVVPESSSAELTACSMIEESDCEEMEVEEEPTVVVENRCSR 180

Query: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240
           PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGF+DSPFRMPEDWPSPSF
Sbjct: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFDDSPFRMPEDWPSPSF 240

Query: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300
           TMSLWYT+PELLTKR KNSTMTEVVLLKFQSLGYFVNVYGSL+ SRGSSVYRVSLDERKF
Sbjct: 241 TMSLWYTIPELLTKREKNSTMTEVVLLKFQSLGYFVNVYGSLSYSRGSSVYRVSLDERKF 300

Query: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360
           APNLDLIWVDSVSNYI+DEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM
Sbjct: 301 APNLDLIWVDSVSNYILDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360

Query: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420
           LLPADVKLKILEAL GVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNR WK
Sbjct: 361 LLPADVKLKILEALTGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRNWK 420

Query: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480
            KFVEYYE+EKQRNRRTSNMRD I+FGR RRPPYPFPVPHIIGGD+DIV GIRLPVYGVP
Sbjct: 421 AKFVEYYEKEKQRNRRTSNMRDLINFGRRRRPPYPFPVPHIIGGDFDIVPGIRLPVYGVP 480

Query: 481 GQSLPRIPRRHAVIPHYDLRGR 503
           GQSLPRIPRRHAVIPHYDLRGR
Sbjct: 481 GQSLPRIPRRHAVIPHYDLRGR 499

[Close]

BLAST of IVF0001308 vs. NCBI nr
Match: XP_008454420.1 (PREDICTED: F-box protein SKIP22-like [Cucumis melo] >ADN33816.1 F-box family protein [Cucumis melo subsp. melo] >TYK29445.1 F-box protein SKIP22-like [Cucumis melo var. makuwa])

HSP 1 Score: 997 bits (2578), Expect = 0.0
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE
Sbjct: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ
Sbjct: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180
           LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR
Sbjct: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180

Query: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240
           PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF
Sbjct: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240

Query: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300
           TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF
Sbjct: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300

Query: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360
           APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM
Sbjct: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360

Query: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420
           LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK
Sbjct: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420

Query: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480
           TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP
Sbjct: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480

Query: 481 GQSLPRIPRRHAVIPHYDLRGR 502
           GQSLPRIPRRHAVIPHYDLRGR
Sbjct: 481 GQSLPRIPRRHAVIPHYDLRGR 502

[Close]

BLAST of IVF0001308 vs. NCBI nr
Match: KAA0044316.1 (F-box protein SKIP22-like [Cucumis melo var. makuwa])

HSP 1 Score: 994 bits (2571), Expect = 0.0
Identity = 500/502 (99.60%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLRSLESKQTLRIEVPDPSTLNHLK+TLLQTLSSSFSADSLHLSLNRKDELQASSPE
Sbjct: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKRTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGK+
Sbjct: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKE 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180
           LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR
Sbjct: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180

Query: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240
           PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF
Sbjct: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240

Query: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300
           TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF
Sbjct: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300

Query: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360
           APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM
Sbjct: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360

Query: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420
           LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK
Sbjct: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420

Query: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480
           TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP
Sbjct: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480

Query: 481 GQSLPRIPRRHAVIPHYDLRGR 502
           GQSLPRIPRRHAVIPHYDLRGR
Sbjct: 481 GQSLPRIPRRHAVIPHYDLRGR 502

[Close]

BLAST of IVF0001308 vs. NCBI nr
Match: XP_004150266.1 (F-box protein SKIP22 [Cucumis sativus] >KGN52738.1 hypothetical protein Csa_014631 [Cucumis sativus])

HSP 1 Score: 919 bits (2375), Expect = 0.0
Identity = 467/502 (93.03%), Postives = 481/502 (95.82%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLRSLES Q+LRIEVPDPSTL+HLK TLLQTLSSSFSADSLHLSLNRKDELQASSPE
Sbjct: 1   MKLRLRSLESNQSLRIEVPDPSTLDHLKHTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           DSLHSLGITSGDL+FFTFKP EFSSLGA  T IQSFQPP L GSSS VSSSSLPQV+GKQ
Sbjct: 61  DSLHSLGITSGDLLFFTFKPPEFSSLGA--TSIQSFQPP-LPGSSSQVSSSSLPQVEGKQ 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180
           LLGIDCDLKKPRLENSEPES+VP+SS AELT  SMIEESDCEEMEVEEEPTVVVE +CSR
Sbjct: 121 LLGIDCDLKKPRLENSEPESVVPESSSAELTACSMIEESDCEEMEVEEEPTVVVENRCSR 180

Query: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240
           PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGF+DSPFRMPEDWPSPSF
Sbjct: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFDDSPFRMPEDWPSPSF 240

Query: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300
           TMSLWYT+PELLTKR KNSTMTEVVLLKFQSLGYFVNVYGSL+ SRGSSVYRVSLDERKF
Sbjct: 241 TMSLWYTIPELLTKREKNSTMTEVVLLKFQSLGYFVNVYGSLSYSRGSSVYRVSLDERKF 300

Query: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360
           APNLDLIWVDSVSNYI+DEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM
Sbjct: 301 APNLDLIWVDSVSNYILDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360

Query: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRVWK 420
           LLPADVKLKILEAL GVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNR WK
Sbjct: 361 LLPADVKLKILEALTGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNRNWK 420

Query: 421 TKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRLPVYGVP 480
            KFVEYYE+EKQRNRRTSNMRD I+FGR RRPPYPFPVPHIIGGD+DIV GIRLPVYGVP
Sbjct: 421 AKFVEYYEKEKQRNRRTSNMRDLINFGRRRRPPYPFPVPHIIGGDFDIVPGIRLPVYGVP 480

Query: 481 GQSLPRIPRRHAVIPHYDLRGR 502
           GQSLPRIPRRHAVIPHYDLRGR
Sbjct: 481 GQSLPRIPRRHAVIPHYDLRGR 499

[Close]

BLAST of IVF0001308 vs. NCBI nr
Match: XP_038905379.1 (F-box protein SKIP22-like [Benincasa hispida])

HSP 1 Score: 871 bits (2250), Expect = 0.0
Identity = 450/508 (88.58%), Postives = 466/508 (91.73%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLRSLESKQTLRIEVPDP TL+HLKQTLLQTLSSSFSADSLHLSLNRKDELQ SSPE
Sbjct: 1   MKLRLRSLESKQTLRIEVPDPCTLDHLKQTLLQTLSSSFSADSLHLSLNRKDELQGSSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           DSLHSLGITSGDLVFFTFKPSEFSSLG   T IQSFQ   L  SSS VSSSSL  VKGKQ
Sbjct: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGG--TSIQSFQGL-LPCSSSQVSSSSLRLVKGKQ 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEE------SDCEEMEVEEEPTVVV 180
           + GIDCDLKKPRLE SE +SM  +S G E+TTSSMIEE      SDCEEMEVEEEPTVVV
Sbjct: 121 IQGIDCDLKKPRLEESEAKSMGLESLGVEMTTSSMIEEGEKPVESDCEEMEVEEEPTVVV 180

Query: 181 EKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPED 240
           EKK SRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNL  ED+PFRMPED
Sbjct: 181 EKKFSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLDSEDNPFRMPED 240

Query: 241 WPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVS 300
           WPSPSF+MSLWYTLPELLTK GKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVS
Sbjct: 241 WPSPSFSMSLWYTLPELLTKGGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVS 300

Query: 301 LDERKFAPNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLP 360
           LDERKFAPNLDLIWVDSVS+YIMDEKEGNPEKQVFE WK+VKDALALPLLIDICEKTGLP
Sbjct: 301 LDERKFAPNLDLIWVDSVSSYIMDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLP 360

Query: 361 PPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVS 420
           PPASFMLLPADVKLKILE+LPGVDIARVECVCTELRYLASSNELWKMKFNQ FGLEDGVS
Sbjct: 361 PPASFMLLPADVKLKILESLPGVDIARVECVCTELRYLASSNELWKMKFNQAFGLEDGVS 420

Query: 421 GNRVWKTKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFPVPHIIGGDYDIVSGIRL 480
           GNR+WK KFV+YYE+EK RNRR+SNMRD +SFGR RRPPYPFPVPHIIGGDYDIV GIRL
Sbjct: 421 GNRLWKPKFVDYYEKEKLRNRRSSNMRDLVSFGRRRRPPYPFPVPHIIGGDYDIVPGIRL 480

Query: 481 PVYGVPGQSLPRIPRRHAVIPHYDLRGR 502
           P YGVP QSLPRIPRRH  +PHYDLRGR
Sbjct: 481 PPYGVPAQSLPRIPRRHVFMPHYDLRGR 505

[Close]

BLAST of IVF0001308 vs. NCBI nr
Match: XP_023552595.1 (F-box protein SKIP22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 765 bits (1975), Expect = 6.26e-275
Identity = 399/510 (78.24%), Postives = 435/510 (85.29%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLRS+ESK+TLRIEVPD ST+ HLKQTLLQ LSSSFSADSLHLSLNRKDELQ SSPE
Sbjct: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADSLHLSLNRKDELQGSSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           DSLHS GITSGDLVFFTFKPS FSS G   T IQ+         SS  SSSS P   GKQ
Sbjct: 61  DSLHSTGITSGDLVFFTFKPSGFSSRGG--TSIQA---------SSQDSSSSRP---GKQ 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIE------ESDCEEMEVEEEPTVVV 180
           + GIDCD+KKPRLENS PES    S  AE+TT  M+E      ESDCEEM+VEE+P V V
Sbjct: 121 IQGIDCDIKKPRLENSMPESKESKSLDAEMTTGGMVEDGEKFLESDCEEMDVEEDPVVDV 180

Query: 181 EKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPED 240
            KKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLI+PNLG ED+PFRMPED
Sbjct: 181 VKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPED 240

Query: 241 WPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVS 300
           WPSPSFTMSLWYTLP+LL K  K+STMTEVVLLKFQSLG+FVNVYGSLNCSRGSSVYR+S
Sbjct: 241 WPSPSFTMSLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRIS 300

Query: 301 LDERKFAPNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLP 360
           LDERKFAPNLDLIWVDSVS+YIMDEKEG+P+KQVFE WK+VKDALALPLLID+CEKTGLP
Sbjct: 301 LDERKFAPNLDLIWVDSVSSYIMDEKEGDPDKQVFELWKLVKDALALPLLIDLCEKTGLP 360

Query: 361 PPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVS 420
            PASFMLLPAD+K+KILEALPGVDIARVECVCTEL YLASSNELWKMKF +EFG ED VS
Sbjct: 361 TPASFMLLPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGSEDSVS 420

Query: 421 GNRVWKTKFVEYYEREKQRNRRTSNMRDAISFGRH-RRPPYPFPVPHIIGGDYDIVSGIR 480
           G R+WK++FV +YE EK R+RRT+++RD +S G   RRPPYPFP PH+IGGDYDIV  IR
Sbjct: 421 GKRLWKSQFVAHYENEKLRSRRTNHVRDFLSLGWPVRRPPYPFPAPHVIGGDYDIVPSIR 480

Query: 481 LPVYGVPGQSLPRIPRRHAV-IPHYDLRGR 502
           LP +G+PGQSL   PRR  V IPHYDL GR
Sbjct: 481 LPTHGIPGQSLRWTPRRRQVFIPHYDLIGR 496

[Close]

BLAST of IVF0001308 vs. TAIR 10
Match: AT1G23780.1 (F-box family protein )

HSP 1 Score: 251.5 bits (641), Expect = 1.4e-66
Identity = 173/436 (39.68%), Postives = 247/436 (56.65%), Query Frame = 0


Query: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
           MKLRLR  E+++TL++E+ D  TL+ L++ +  T+ S     S+HLSLNRKDEL   SPE
Sbjct: 1   MKLRLRHHETRETLKLELADADTLHDLRRRINPTVPS-----SVHLSLNRKDELITPSPE 60

Query: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
           D+L SLG+ SGDL++F+ +  E S+               L  S ++ S S   Q     
Sbjct: 61  DTLRSLGLISGDLIYFSLEAGESSNW-------------KLRDSETVASQSESNQTSVHD 120

Query: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSR 180
            +G       P    S P + V D  G +++     E  D E++++  E      K+ S 
Sbjct: 121 SIGFAEVDVVPDQAKSNPNTSVEDPEG-DISGMEGPEPMDVEQLDM--ELAAAGSKRLSE 180

Query: 181 PIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSF 240
           P FL+ +L E+ G D +    L  +VHAV+LESGFVL+N         F   ++      
Sbjct: 181 PFFLKNILLEKSG-DTSELTTLALSVHAVMLESGFVLLNHG----SDKFNFSKE----LL 240

Query: 241 TMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKF 300
           T+SL YTLPEL+  + K++   E V +KFQ+LG  V VYG++  S G     ++LD+R+F
Sbjct: 241 TVSLRYTLPELI--KSKDTNTIESVSVKFQNLGPVVVVYGTVGGSSGR--VHMNLDKRRF 300

Query: 301 APNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFM 360
            P +DL+   S S+   +E   +  ++VF FW++VKD L +PLLI IC+K GL PP   M
Sbjct: 301 VPVIDLVMDTSTSD---EEGSSSIYREVFMFWRMVKDRLVIPLLIGICDKAGLEPPPCLM 360

Query: 361 LLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFG----LEDGVSGN 420
            LP ++KLKILE LPGV I  + CVCTE+RYLAS N+LWK K  +E       E G S N
Sbjct: 361 RLPTELKLKILELLPGVSIGNMACVCTEMRYLASDNDLWKQKCLEEVNNFVVTEAGDSVN 396

Query: 421 RVWKTKFVEYYEREKQ 433
             WK +F  ++ R+KQ
Sbjct: 421 --WKARFATFW-RQKQ 396

[Close]

BLAST of IVF0001308 vs. TAIR 10
Match: AT1G23770.1 (F-box family protein )

HSP 1 Score: 176.0 bits (445), Expect = 7.5e-44
Identity = 123/309 (39.81%), Postives = 179/309 (57.93%), Query Frame = 0


Query: 166 VEEEPTVVVEKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFE 225
           ++ E      K+ S P FL+ VL E+ G D +    L  +VHAV+LESGFVL++   G +
Sbjct: 31  MDVELAAAKSKRLSEPFFLKNVLLEKSG-DTSDLTALALSVHAVMLESGFVLLDH--GSD 90

Query: 226 DSPFRMPEDWPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSL--N 285
              F           ++SL YTLPEL+T++  N+   E V ++FQ++G  + VYG+L  +
Sbjct: 91  KFSF------SKKLLSVSLRYTLPELITRKDTNT--VESVTVRFQNIGPRLVVYGTLGGS 150

Query: 286 CSRGSSVYRVSLDERKFAPNLDLIWVDSVSNYIMDEKEGNPE--KQVFEFWKIVKDALAL 345
           C R   V+  SLD+ +F P +DL+ VD+    +  EK+G+    ++VF  W++VKD L +
Sbjct: 151 CKR---VHMTSLDKSRFLPVIDLV-VDT----LKFEKQGSSSYYREVFMLWRMVKDELVI 210

Query: 346 PLLIDICEKTGLPPPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKM 405
           PLLI +C+K GL  P   MLLP ++KLKILE LPGV I  + CVCTE+RYLAS N+LW+ 
Sbjct: 211 PLLIGLCDKAGLESPPCLMLLPTELKLKILELLPGVSIGYMACVCTEMRYLASDNDLWEH 270

Query: 406 KFNQEFGLEDG-------VSGNRVWKTKFVEYYEREK-----QRNR--RTSNMRDAISF- 455
           K      LE+G        +G+  WK KF  ++ R++     +RN   + SN R    F 
Sbjct: 271 KC-----LEEGKGCLWKLYTGDVDWKRKFASFWRRKRLDLLARRNPPIKKSNPRFPTLFP 315

[Close]

BLAST of IVF0001308 vs. TAIR 10
Match: AT1G70360.1 (F-box family protein )

HSP 1 Score: 106.3 bits (264), Expect = 7.3e-23
Identity = 72/196 (36.73%), Postives = 104/196 (53.06%), Query Frame = 0


Query: 201 LLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWPSPSFTMSLWYTLPELLTKRGKNST 260
           +++  VHAV+LESGFVL +P     DS  R      S    +SL YTLP +    G N  
Sbjct: 12  IVIMTVHAVMLESGFVLFDP-----DSSMRFSF---SKKTLVSLNYTLPSVKGIVGLNFE 71

Query: 261 MTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKFAPNLDLIWVDSVSNYIMDEK 320
              +V                     GS V  VS+D+R +   +DL+    +     DE+
Sbjct: 72  KEAIV---------------------GSFVRVVSIDKRSYVHIVDLL----METLKSDEE 131

Query: 321 EG--NPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKILEALPGVD 380
           E   + + +V  +W+++KD +  PLL+D+C KTGL  P  F+ LP ++K KILE+LPGVD
Sbjct: 132 EDTLSIDCKVLVWWRMIKDGIVTPLLVDLCYKTGLELPPCFISLPRELKHKILESLPGVD 174

Query: 381 IARVECVCTELRYLAS 395
           I  + CV +ELR +AS
Sbjct: 192 IGTLACVSSELRDMAS 174

The following BLAST results are available for this feature:

BLAST of IVF0001308 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUB8	2.0e-65	39.68	F-box protein SKIP22 OS=Arabidopsis thaliana OX=3702 GN=SKIP22 PE=1 SV=1	[more]
Q9ZUB9	1.1e-42	39.81	Putative F-box protein At1g23770 OS=Arabidopsis thaliana OX=3702 GN=At1g23770 PE...	[more]
O64600	1.0e-21	36.73	F-box protein At1g70360 OS=Arabidopsis thaliana OX=3702 GN=At1g70360 PE=2 SV=1	[more]

BLAST of IVF0001308 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E231	1.2e-286	100.00	F-box protein SKIP22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
E5GBH4	1.2e-286	100.00	F-box family protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BZC5	1.2e-286	100.00	F-box protein SKIP22-like OS=Cucumis melo OX=3656 GN=LOC103494830 PE=4 SV=1	[more]
A0A5A7TQD4	7.5e-286	99.60	F-box protein SKIP22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0KT22	3.1e-263	93.03	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000590 PE=4 ...	[more]

BLAST of IVF0001308 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454420.1	0.0	100.00	PREDICTED: F-box protein SKIP22-like [Cucumis melo] >ADN33816.1 F-box family pro...	[more]
KAA0044316.1	0.0	99.60	F-box protein SKIP22-like [Cucumis melo var. makuwa]	[more]
XP_004150266.1	0.0	93.03	F-box protein SKIP22 [Cucumis sativus] >KGN52738.1 hypothetical protein Csa_0146...	[more]
XP_038905379.1	0.0	88.58	F-box protein SKIP22-like [Benincasa hispida]	[more]
XP_023552595.1	6.26e-275	78.24	F-box protein SKIP22-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0001308 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23780.1	1.4e-66	39.68	F-box family protein	[more]
AT1G23770.1	7.5e-44	39.81	F-box family protein	[more]
AT1G70360.1	7.3e-23	36.73	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 362..402 e-value: 0.0016 score: 27.7
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 362..400 e-value: 1.7E-5 score: 24.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 356..402 score: 11.113627
None	No IPR available	GENE3D	1.20.1280.50		coord: 360..435 e-value: 5.2E-11 score: 44.3
None	No IPR available	GENE3D	3.40.1000.30		coord: 179..359 e-value: 6.8E-37 score: 128.5
None	No IPR available	GENE3D	3.10.20.90		coord: 1..78 e-value: 5.6E-6 score: 28.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..151
None	No IPR available	PANTHER	PTHR47602	F-BOX PROTEIN SKIP22	coord: 1..500
None	No IPR available	PANTHER	PTHR47602:SF2	F-BOX PROTEIN SKIP22	coord: 1..500
IPR024682	Nuclear pore localisation protein Npl4, ubiquitin-like domain	PFAM	PF11543	UN_NPL4	coord: 12..76 e-value: 1.4E-4 score: 22.3
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 352..423

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001308.1	IVF0001308.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding