IVF0001262 (gene) Melon (IVF77) v1

Overview
NameIVF0001262
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionOrf122b protein
Locationchr04: 15702742 .. 15702933 (-)
RNA-Seq ExpressionIVF0001262
SyntenyIVF0001262
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGTTGTCACACTCCCTACCTTCCAAAGGTGCCTGGAGGACGGGCTAGACGCAACAGAGCGAGAACCTGGGAGTGGATTCCTCACGGGCAGGGGTACAAGAGACGACCATCTTGAGACATATCACGACCTACAAGCAAGACCAGCGAGATTGGGAGGGCAAGTCGATTGGGAGTTAGAGGATCCATAG

mRNA sequence

ATGTACGTTGTCACACTCCCTACCTTCCAAAGGTGCCTGGAGGACGGGCTAGACGCAACAGAGCGAGAACCTGGGAGTGGATTCCTCACGGGCAGGGGTACAAGAGACGACCATCTTGAGACATATCACGACCTACAAGCAAGACCAGCGAGATTGGGAGGGCAAGTCGATTGGGAGTTAGAGGATCCATAG

Coding sequence (CDS)

ATGTACGTTGTCACACTCCCTACCTTCCAAAGGTGCCTGGAGGACGGGCTAGACGCAACAGAGCGAGAACCTGGGAGTGGATTCCTCACGGGCAGGGGTACAAGAGACGACCATCTTGAGACATATCACGACCTACAAGCAAGACCAGCGAGATTGGGAGGGCAAGTCGATTGGGAGTTAGAGGATCCATAG

Protein sequence

MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWELEDP
Homology
BLAST of IVF0001262 vs. ExPASy TrEMBL
Match: A0A5D3BXH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001590 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.9e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL 60
          MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL
Sbjct: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL 60

Query: 61 EDP 64
          EDP
Sbjct: 61 EDP 63

BLAST of IVF0001262 vs. ExPASy TrEMBL
Match: G3EU45 (Uncharacterized protein ORF3 OS=Cucumis melo subsp. melo OX=412675 GN=ORF3 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.2e-16
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE YHDLQARPAR G
Sbjct: 29 VYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPG 81

BLAST of IVF0001262 vs. ExPASy TrEMBL
Match: A0A3S9JIJ2 (Uncharacterized protein OS=Cucumis melo var. momordica OX=2034244 GN=ORF5 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.2e-16
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE YHDLQARPAR G
Sbjct: 29 VYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPG 81

BLAST of IVF0001262 vs. ExPASy TrEMBL
Match: A0A7H1CQT9 (Uncharacterized protein OS=Sapindus mukorossi OX=57655 GN=orf101b PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.4e-16
Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER+PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 29 VYVVTLPVFQRCLEDGPDAAERQPGSGFPTGRGTGDGHLEAHHDLQARPARPG 81

BLAST of IVF0001262 vs. ExPASy TrEMBL
Match: B6VJZ2 (ORF145 OS=Vitis vinifera OX=29760 GN=orf145 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.3e-16
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
           +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 68  VYVVTLPAFQRCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPG 120

BLAST of IVF0001262 vs. NCBI nr
Match: KAA0061104.1 (hypothetical protein E6C27_scaffold348G00150 [Cucumis melo var. makuwa] >TYK03774.1 hypothetical protein E5676_scaffold863G001590 [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (350), Expect = 1.32e-41
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL 60
          MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL
Sbjct: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL 60

Query: 61 EDP 63
          EDP
Sbjct: 61 EDP 63

BLAST of IVF0001262 vs. NCBI nr
Match: KAE8646151.1 (hypothetical protein Csa_016140, partial [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 9.53e-23
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 53
          +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE YHDLQARPAR G
Sbjct: 3  VYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPG 55

BLAST of IVF0001262 vs. NCBI nr
Match: YP_009935537.1 (hypothetical protein SAMUK_000310 [Sapindus mukorossi] >QNS26097.1 hypothetical protein SAMUK_000310 [Sapindus mukorossi])

HSP 1 Score: 92.0 bits (227), Expect = 6.11e-22
Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 53
          +YVVTLP FQRCLEDG DA ER+PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 29 VYVVTLPVFQRCLEDGPDAAERQPGSGFPTGRGTGDGHLEAHHDLQARPARPG 81

BLAST of IVF0001262 vs. NCBI nr
Match: CBI14783.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 91.3 bits (225), Expect = 1.02e-21
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 53
           +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 68  VYVVTLPAFQRCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPG 120

BLAST of IVF0001262 vs. NCBI nr
Match: AEN56135.1 (hypothetical protein [Cucumis melo subsp. melo] >AZP40307.1 hypothetical protein [Cucumis melo var. momordica])

HSP 1 Score: 92.4 bits (228), Expect = 1.08e-21
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 53
          +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE YHDLQARPAR G
Sbjct: 29 VYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPG 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BXH83.9e-30100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
G3EU454.2e-1681.13Uncharacterized protein ORF3 OS=Cucumis melo subsp. melo OX=412675 GN=ORF3 PE=4 ... [more]
A0A3S9JIJ24.2e-1681.13Uncharacterized protein OS=Cucumis melo var. momordica OX=2034244 GN=ORF5 PE=4 S... [more]
A0A7H1CQT95.4e-1679.25Uncharacterized protein OS=Sapindus mukorossi OX=57655 GN=orf101b PE=4 SV=1[more]
B6VJZ29.3e-1679.25ORF145 OS=Vitis vinifera OX=29760 GN=orf145 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0061104.11.32e-41100.00hypothetical protein E6C27_scaffold348G00150 [Cucumis melo var. makuwa] >TYK0377... [more]
KAE8646151.19.53e-2381.13hypothetical protein Csa_016140, partial [Cucumis sativus][more]
YP_009935537.16.11e-2279.25hypothetical protein SAMUK_000310 [Sapindus mukorossi] >QNS26097.1 hypothetical ... [more]
CBI14783.31.02e-2179.25unnamed protein product, partial [Vitis vinifera][more]
AEN56135.11.08e-2181.13hypothetical protein [Cucumis melo subsp. melo] >AZP40307.1 hypothetical protein... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR48161FAMILY NOT NAMEDcoord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001262.1IVF0001262.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion