IVF0001248 (gene) Melon (IVF77) v1

Overview


Name	IVF0001248
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr09: 13913526 .. 13913798 (+)
RNA-Seq Expression	IVF0001248
Synteny	IVF0001248

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTTCCCTTCTTCCCCTTCCCCACGATTGTTTCATTCCTTCCAAAGTTAATCACTTCTGCCCCCATCGATACACCTCAGCCGATGCCTCATCGTATGCCTCCAATGCTGACTCCAGTCGCAAGCTCAACCAAATCTGACTCCTACTGTTACCGTGATGCTAATTCTAGTCGTGCTGCAACATCTGACGCCGCCCAGATCCGACTCCAGCCGCCTCCTTCATCTCCACTAGCCCTAATTTCCAAATCCCACAATAACATCCCAATTTGA

mRNA sequence

ATGATTTTTCCCTTCTTCCCCTTCCCCACGATTGTTTCATTCCTTCCAAAGTTAATCACTTCTGCCCCCATCGATACACCTCAGCCGATGCCTCATCGTATGCCTCCAATGCTGACTCCAGTCGCAAGCTCAACCAAATCTGACTCCTACTGTTACCGTGATGCTAATTCTAGTCGTGCTGCAACATCTGACGCCGCCCAGATCCGACTCCAGCCGCCTCCTTCATCTCCACTAGCCCTAATTTCCAAATCCCACAATAACATCCCAATTTGA

Coding sequence (CDS)

ATGATTTTTCCCTTCTTCCCCTTCCCCACGATTGTTTCATTCCTTCCAAAGTTAATCACTTCTGCCCCCATCGATACACCTCAGCCGATGCCTCATCGTATGCCTCCAATGCTGACTCCAGTCGCAAGCTCAACCAAATCTGACTCCTACTGTTACCGTGATGCTAATTCTAGTCGTGCTGCAACATCTGACGCCGCCCAGATCCGACTCCAGCCGCCTCCTTCATCTCCACTAGCCCTAATTTCCAAATCCCACAATAACATCCCAATTTGA

Protein sequence

MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRAATSDAAQIRLQPPPSSPLALISKSHNNIPI

Homology

[Close]

BLAST of IVF0001248 vs. ExPASy TrEMBL
Match: A0A5A7V9W6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold632G00010 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60
          MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA
Sbjct: 1  MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60

Query: 61 ATSDAAQIRLQPPPSSPLALISKSHNNIPI 91
          ATSDAAQIRLQPPPSSPLALISKSHNNIPI
Sbjct: 61 ATSDAAQIRLQPPPSSPLALISKSHNNIPI 90

[Close]

BLAST of IVF0001248 vs. ExPASy TrEMBL
Match: A0A5D3BWD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00060 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.3e-34
Identity = 81/90 (90.00%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1  MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60
          MIFPFFPFPTI  FLPKLIT API  PQ MPHRMPPMLTPVASSTKSDSYCYRDANSS A
Sbjct: 1  MIFPFFPFPTIFPFLPKLITPAPITAPQLMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60

Query: 61 ATSDAAQIRLQPPPSSPLALISKSHNNIPI 91
          ATS+AAQIRLQPPPSSPLALI KSHNNIPI
Sbjct: 61 ATSNAAQIRLQPPPSSPLALICKSHNNIPI 90

[Close]

BLAST of IVF0001248 vs. ExPASy TrEMBL
Match: A0A5D3C069 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001210 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.0e-28
Identity = 69/80 (86.25%), Postives = 71/80 (88.75%), Query Frame = 0


Query: 11 IVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRAATSDAAQIRL 70
          I  FLPKLI  AP+  PQ MPHRMPPM TP+ASSTKSDSYCYRDANSSRAATSDA QIRL
Sbjct: 2  IFPFLPKLIIPAPVAAPQSMPHRMPPMPTPIASSTKSDSYCYRDANSSRAATSDATQIRL 61

Query: 71 QPPPSSPLALISKSHNNIPI 91
          QPPPSSPLALISKSHNNIPI
Sbjct: 62 QPPPSSPLALISKSHNNIPI 81

[Close]

BLAST of IVF0001248 vs. ExPASy TrEMBL
Match: A0A5D3CSE0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001680 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22
Identity = 59/68 (86.76%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1  MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60
          MIFPFF FPTI  FLPK+IT AP+  PQPMPHRMPPMLTPVASSTKSDSYCYRDANSSR 
Sbjct: 1  MIFPFFSFPTIFPFLPKVITLAPVAAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRT 60

Query: 61 ATSDAAQI 69
          ATSDAAQI
Sbjct: 61 ATSDAAQI 68

[Close]

BLAST of IVF0001248 vs. ExPASy TrEMBL
Match: A0A5A7U6M1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00630 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.0e-20
Identity = 55/65 (84.62%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 1  MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60
          MIFPFFPF TI  FLPKLI  AP+  PQPMPHRMPPMLTPVASSTKSDSYCYRDANSS A
Sbjct: 1  MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60

Query: 61 ATSDA 66
          ATSD+
Sbjct: 61 ATSDS 65

[Close]

BLAST of IVF0001248 vs. NCBI nr
Match: KAA0062675.1 (uncharacterized protein E6C27_scaffold1576G00010 [Cucumis melo var. makuwa] >TYK08457.1 uncharacterized protein E5676_scaffold632G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 174 bits (440), Expect = 1.65e-54
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60
          MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA
Sbjct: 1  MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60

Query: 61 ATSDAAQIRLQPPPSSPLALISKSHNNIPI 90
          ATSDAAQIRLQPPPSSPLALISKSHNNIPI
Sbjct: 61 ATSDAAQIRLQPPPSSPLALISKSHNNIPI 90

[Close]

BLAST of IVF0001248 vs. NCBI nr
Match: KAA0033001.1 (uncharacterized protein E6C27_scaffold269G00940 [Cucumis melo var. makuwa] >TYK03410.1 uncharacterized protein E5676_scaffold121G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (388), Expect = 1.42e-46
Identity = 81/90 (90.00%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1  MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60
          MIFPFFPFPTI  FLPKLIT API  PQ MPHRMPPMLTPVASSTKSDSYCYRDANSS A
Sbjct: 1  MIFPFFPFPTIFPFLPKLITPAPITAPQLMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60

Query: 61 ATSDAAQIRLQPPPSSPLALISKSHNNIPI 90
          ATS+AAQIRLQPPPSSPLALI KSHNNIPI
Sbjct: 61 ATSNAAQIRLQPPPSSPLALICKSHNNIPI 90

[Close]

BLAST of IVF0001248 vs. NCBI nr
Match: KAA0042899.1 (uncharacterized protein E6C27_scaffold44G004160 [Cucumis melo var. makuwa] >TYK05301.1 uncharacterized protein E5676_scaffold108G001210 [Cucumis melo var. makuwa])

HSP 1 Score: 133 bits (334), Expect = 1.87e-38
Identity = 69/80 (86.25%), Postives = 71/80 (88.75%), Query Frame = 0


Query: 11 IVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRAATSDAAQIRL 70
          I  FLPKLI  AP+  PQ MPHRMPPM TP+ASSTKSDSYCYRDANSSRAATSDA QIRL
Sbjct: 2  IFPFLPKLIIPAPVAAPQSMPHRMPPMPTPIASSTKSDSYCYRDANSSRAATSDATQIRL 61

Query: 71 QPPPSSPLALISKSHNNIPI 90
          QPPPSSPLALISKSHNNIPI
Sbjct: 62 QPPPSSPLALISKSHNNIPI 81

[Close]

BLAST of IVF0001248 vs. NCBI nr
Match: KAA0037112.1 (uncharacterized protein E6C27_scaffold379G00130 [Cucumis melo var. makuwa] >TYK13964.1 uncharacterized protein E5676_scaffold832G001680 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (288), Expect = 1.35e-31
Identity = 59/68 (86.76%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1  MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60
          MIFPFF FPTI  FLPK+IT AP+  PQPMPHRMPPMLTPVASSTKSDSYCYRDANSSR 
Sbjct: 1  MIFPFFSFPTIFPFLPKVITLAPVAAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRT 60

Query: 61 ATSDAAQI 68
          ATSDAAQI
Sbjct: 61 ATSDAAQI 68

[Close]

BLAST of IVF0001248 vs. NCBI nr
Match: KAA0050820.1 (uncharacterized protein E6C27_scaffold404G00780 [Cucumis melo var. makuwa] >TYK08525.1 uncharacterized protein E5676_scaffold323G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (266), Expect = 3.90e-28
Identity = 55/65 (84.62%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 1  MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60
          MIFPFFPF TI  FLPKLI  AP+  PQPMPHRMPPMLTPVASSTKSDSYCYRDANSS A
Sbjct: 1  MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60

Query: 61 ATSDA 65
          ATSD+
Sbjct: 61 ATSDS 65

The following BLAST results are available for this feature:

BLAST of IVF0001248 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0001248 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9W6	1.2e-40	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BWD1	1.3e-34	90.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C069	3.0e-28	86.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CSE0	1.1e-22	86.76	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U6M1	4.0e-20	84.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0001248 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062675.1	1.65e-54	100.00	uncharacterized protein E6C27_scaffold1576G00010 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0033001.1	1.42e-46	90.00	uncharacterized protein E6C27_scaffold269G00940 [Cucumis melo var. makuwa] >TYK0...	[more]
KAA0042899.1	1.87e-38	86.25	uncharacterized protein E6C27_scaffold44G004160 [Cucumis melo var. makuwa] >TYK0...	[more]
KAA0037112.1	1.35e-31	86.76	uncharacterized protein E6C27_scaffold379G00130 [Cucumis melo var. makuwa] >TYK1...	[more]
KAA0050820.1	3.90e-28	84.62	uncharacterized protein E6C27_scaffold404G00780 [Cucumis melo var. makuwa] >TYK0...	[more]

BLAST of IVF0001248 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001248.1	IVF0001248.1	mRNA