Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAACCCGAACATTGAAATCGAACCAAAGGTACGACTACTAGATCATCTCGACAAAAGAGGTAAAAGTTATGCATCCTCTGACTCAAACTCAGATTCATCTAGAAAATCTTATGCAACAGTAGTTTCACAGGGTTATTCAAGTGACTCAAGCTCCTACTCTAACAATAGAAAGCCAAGATTAGTAAAAAAATTCCCTTGAAAATGCAGTTGTGATTACCAGGAGATACTTTCATGATGATTGGAAAATCATCATGAACAGCCTTCGAAGACAAATTAAATCGACCTTCACGCATGACTCCTTTCACGCGGAAAATACGTTGATCACTTTCTCTGAACCATGGAACGCAAAATTCTTATGCAGTAAAACTGGGTGGACTACAGTTGAGAAATTCCATGTTAAGTTCAAATTCTGGCCTATAGAGAAACATGCTGCCCAAAAATTAATTCTAAGTTATGGTGACAGGATCTCCTTTCGGGGCATTCCAATACATGCTTGGAACATGGACACCTTCATACAAATAGGTGATGCATGTGGGGGATTTATTGATGTAGACAAAACTACTATAGACATGTAAAATTTCATCAAAGCCAAGATCAAAGTAAGATATAATTATTGTGGGTTTATCCTAGCTACAATCAGAATAAAAGACAAGGATGATCATTTTTTCGTTGTGCATACTGTTACTATATGTTCTGGTAAATGGTTGGTTGAACGTGACGTTAAAATTCATGGATCCTTCAAGAGGCAAGCAACCATTGATTTCAACGAGTTAAACCCTAAAGCTGAACAATACCAGTTCGTCAGAGATCTGGCAATTCCAATCGACGAATTTAAAAAGTTGAATCCAAGTGAATTAATGGCTGAATTGACAGCTACAGAAAATCCTATAATAGCCAAGGATATTAAAGAAAGGAATCCTATAAAATCTGGTAAGAAGGACTTCAAGAGGCCAAAAATGGTAGAAAGATGGATGAAAAAAATGAATGAATTAAATTCTAGCAATGATGAGGAGAGTAATGATAAGGAGAATTTAATAGAACGATTTAATGAAAAAGATAACGAATCTTTCAAAGTGGGCAGCAAAAGGAAAGTTTGTTTCCTTTCTCCAAAAAATTAAACTATTTTCTACAACCCCAAACTTGCTCCAGCTAAGCAAACAGATAGTGCTGAGTCATCAAGGAAAAAAAAAGTCATTATACAAGAGGACAACATGGAAGGAAAGCCCAAAAGAAAGAGCACGGGCCAAAGCCCACTATTCCAAGTCTAATCATAAAGCCAATCCAAATGGTTTCGATGAAGACAAACATAGTGGTAGGAAACTCACAATAGATTTGAGCCACCTCTCTCTTCTCAAATCAAAAGAAAAAAAGAGCTAGATGAAGAGATCACAGACTCTAGCCTAGATGTGGTAAAATAAACGCCTGACATGATTCTTAACAAGGATGCTGCACCAAACATTAACAAATCAGACAATGAAGAAAGAGCCATACAAAATGAAAATTCTAGAGGAGATGGAAAAAATGAAGAAGATGATTCTTTCAAGATAAAACTAATCAAGTGGCTCAAAGAAAAAATTCTGAAGTTGGTTGCTTCAATTACGGGGGATAAACAACAAAATGTTGGAAAAAATGTATCTGATCAGGTTGGGCTTAGGGACAACATAAACAAGGAACCACTGGGCTTTATCAGTTTTAAATGGAAGTTCTTGCATGGAATGTAA
mRNA sequence
ATGATCAACCCGAACATTGAAATCGAACCAAAGGTACGACTACTAGATCATCTCGACAAAAGAGGTAAAAGTTATGCATCCTCTGACTCAAACTCAGATTCATCTAGAAAATCTTATGCAACAGTAGTTTCACAGGGTTATTCAATTGTGATTACCAGGAGATACTTTCATGATGATTGGAAAATCATCATGAACAGCCTTCGAAGACAAATTAAATCGACCTTCACGCATGACTCCTTTCACGCGGAAAATACGTTGATCACTTTCTCTGAACCATGGAACGCAAAATTCTTATGCAGTAAAACTGGGTGGACTACAGTTGAGAAATTCCATGTTAAGTTCAAATTCTGGCCTATAGAGAAACATGCTGCCCAAAAATTAATTCTAAGTTATGGTGACAGGATCTCCTTTCGGGGCATTCCAATACATGCTTGGAACATGGACACCTTCATACAAATAGGTGATGCATGTGGGGGATTTATTGATGTAGACAAAACTACTATAGACATATATAATTATTGTGGGTTTATCCTAGCTACAATCAGAATAAAAGACAAGGATGATCATTTTTTCGTTGTGCATACTGTTACTATATGTTCTGGTAAATGGTTGGTTGAACGTGACGTTAAAATTCATGGATCCTTCAAGAGGCAAGCAACCATTGATTTCAACGAGTTAAACCCTAAAGCTGAACAATACCAGTTCGTCAGAGATCTGGCAATTCCAATCGACGAATTTAAAAAGTTGAATCCAAGTGAATTAATGGCTGAATTGACAGCTACAGAAAATCCTATAATAGCCAAGGATATTAAAGAAAGGAATCCTATAAAATCTGGTAAGAAGGACTTCAAGAGGCCAAAAATGGTAGAAAGATGGATGAAAAAAATGAATGAATTAAATTCTAGCAATGATGAGGAGAGTAATGATAAGGAGAATTTAATAGAACGATTTAATGAAAAAGATAACGAATCTTTCAAAGTGGGCAGCAAAAGGAAACCACCTCTCTCTTCTCAAATCAAAAGAAAAAAAGAGCTAGATGAAGAGATCACAGACTCTAGCCTAGATGTGGATGCTGCACCAAACATTAACAAATCAGACAATGAAGAAAGAGCCATACAAAATGAAAATTCTAGAGGAGATGGAAAAAATGAAGAAGATGATTCTTTCAAGATAAAACTAATCAAGTGGCTCAAAGAAAAAATTCTGAAGTTGGTTGCTTCAATTACGGGGGATAAACAACAAAATGTTGGAAAAAATGTATCTGATCAGGTTGGGCTTAGGGACAACATAAACAAGGAACCACTGGGCTTTATCAGTTTTAAATGGAAGTTCTTGCATGGAATGTAA
Coding sequence (CDS)
ATGATCAACCCGAACATTGAAATCGAACCAAAGGTACGACTACTAGATCATCTCGACAAAAGAGGTAAAAGTTATGCATCCTCTGACTCAAACTCAGATTCATCTAGAAAATCTTATGCAACAGTAGTTTCACAGGGTTATTCAATTGTGATTACCAGGAGATACTTTCATGATGATTGGAAAATCATCATGAACAGCCTTCGAAGACAAATTAAATCGACCTTCACGCATGACTCCTTTCACGCGGAAAATACGTTGATCACTTTCTCTGAACCATGGAACGCAAAATTCTTATGCAGTAAAACTGGGTGGACTACAGTTGAGAAATTCCATGTTAAGTTCAAATTCTGGCCTATAGAGAAACATGCTGCCCAAAAATTAATTCTAAGTTATGGTGACAGGATCTCCTTTCGGGGCATTCCAATACATGCTTGGAACATGGACACCTTCATACAAATAGGTGATGCATGTGGGGGATTTATTGATGTAGACAAAACTACTATAGACATATATAATTATTGTGGGTTTATCCTAGCTACAATCAGAATAAAAGACAAGGATGATCATTTTTTCGTTGTGCATACTGTTACTATATGTTCTGGTAAATGGTTGGTTGAACGTGACGTTAAAATTCATGGATCCTTCAAGAGGCAAGCAACCATTGATTTCAACGAGTTAAACCCTAAAGCTGAACAATACCAGTTCGTCAGAGATCTGGCAATTCCAATCGACGAATTTAAAAAGTTGAATCCAAGTGAATTAATGGCTGAATTGACAGCTACAGAAAATCCTATAATAGCCAAGGATATTAAAGAAAGGAATCCTATAAAATCTGGTAAGAAGGACTTCAAGAGGCCAAAAATGGTAGAAAGATGGATGAAAAAAATGAATGAATTAAATTCTAGCAATGATGAGGAGAGTAATGATAAGGAGAATTTAATAGAACGATTTAATGAAAAAGATAACGAATCTTTCAAAGTGGGCAGCAAAAGGAAACCACCTCTCTCTTCTCAAATCAAAAGAAAAAAAGAGCTAGATGAAGAGATCACAGACTCTAGCCTAGATGTGGATGCTGCACCAAACATTAACAAATCAGACAATGAAGAAAGAGCCATACAAAATGAAAATTCTAGAGGAGATGGAAAAAATGAAGAAGATGATTCTTTCAAGATAAAACTAATCAAGTGGCTCAAAGAAAAAATTCTGAAGTTGGTTGCTTCAATTACGGGGGATAAACAACAAAATGTTGGAAAAAATGTATCTGATCAGGTTGGGCTTAGGGACAACATAAACAAGGAACCACTGGGCTTTATCAGTTTTAAATGGAAGTTCTTGCATGGAATGTAA
Protein sequence
MINPNIEIEPKVRLLDHLDKRGKSYASSDSNSDSSRKSYATVVSQGYSIVITRRYFHDDWKIIMNSLRRQIKSTFTHDSFHAENTLITFSEPWNAKFLCSKTGWTTVEKFHVKFKFWPIEKHAAQKLILSYGDRISFRGIPIHAWNMDTFIQIGDACGGFIDVDKTTIDIYNYCGFILATIRIKDKDDHFFVVHTVTICSGKWLVERDVKIHGSFKRQATIDFNELNPKAEQYQFVRDLAIPIDEFKKLNPSELMAELTATENPIIAKDIKERNPIKSGKKDFKRPKMVERWMKKMNELNSSNDEESNDKENLIERFNEKDNESFKVGSKRKPPLSSQIKRKKELDEEITDSSLDVDAAPNINKSDNEERAIQNENSRGDGKNEEDDSFKIKLIKWLKEKILKLVASITGDKQQNVGKNVSDQVGLRDNINKEPLGFISFKWKFLHGM
Homology
BLAST of IVF0001177 vs. ExPASy TrEMBL
Match:
A0A5A7T0M9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00440 PE=4 SV=1)
HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 236/450 (52.44%), Postives = 293/450 (65.11%), Query Frame = 0
Query: 1 MINPNIEIEPKVR-LLDHLDKRGKSYASSDSNSDSSRKSYATVVSQGYS----------- 60
M+NPN++ EPK R L+H K+GKS AS+DS+SDSSRKS A VVS+GYS
Sbjct: 68 MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127
Query: 61 ------------IVITRRYFHDDWKIIMNSLRRQIKSTFTHDSFHAENTLITFSEPWNAK 120
+VITRR FHDDWK+IMNSL++Q K++FT++ FHAE LI FSE NAK
Sbjct: 128 QRSVKTLPLENAVVITRRLFHDDWKVIMNSLKKQTKTSFTYNPFHAEKALIIFSEHQNAK 187
Query: 121 FLCSKTGWTTVEKFHVKFKFWPIEKHAAQKLILSYGDRISFRGIPIHAWNMDTFIQIGDA 180
LCS T WTT+ KF VKF+FW IEKHA QKLI SYG +SFRGIPIH WN+DTF+QIG++
Sbjct: 188 SLCSNTRWTTISKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTFLQIGNS 247
Query: 181 CGGFIDVDKTTIDI-----------YNYCGFILATIRIKDKDDHFFVVHTVTICSGKWLV 240
G ++V+K T+++ YNY GFILATIRIKDKD HFFVVHTVTICSGKWL
Sbjct: 248 SEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDVHFFVVHTVTICSGKWLA 307
Query: 241 ERDVKIHGSFKRQATIDFNELNPKAEQYQFVRDLAIPIDEFKKLNPSELMAELTATENPI 300
+RDVKIHGSFKRQ I+F++ N KAEQ+ F DLAI +FK LM ELT E+P
Sbjct: 308 KRDVKIHGSFKRQVAIEFDKFNSKAEQFNFTGDLAISPGKFKITRNMVLMTELTNEEDPT 367
Query: 301 IAKDIKERNPIKSGKKDFKRPKMVERWMKKMNELNSSNDEESNDKENLIERFNEKDNESF 360
I K I + + KS KK+ KR K+VERWM+K + SSNDEES + E+ E N DNES
Sbjct: 368 ITKKIYDGDLPKSSKKNSKRLKLVERWMEKRAVITSSNDEESFNHEHSFEGINVADNESL 427
Query: 361 KVGSKRKPPLSSQIKRKKELDEEITDSSLDVDAAPNINKSDNEERAIQN-ENSRGDGKNE 415
++G KRK + ++ +E DS+ N N +D E R +Q E
Sbjct: 428 RLGGKRKEEYITDF--STDVVKETQDSTTKKVTTQNNNSTDFEGRGVQTLPTEVVMVYKE 487
BLAST of IVF0001177 vs. ExPASy TrEMBL
Match:
A0A5D3E1T4 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00930 PE=4 SV=1)
HSP 1 Score: 406.8 bits (1044), Expect = 1.2e-109
Identity = 241/463 (52.05%), Postives = 293/463 (63.28%), Query Frame = 0
Query: 1 MINPNIEIEPKVR-LLDHLDKRGKSYASSDSNSDSSRKSYATVVSQGYS----------- 60
M+NPN++ EPK R L+H K+GKS AS+DS+SDSSRKS A VVS+GYS
Sbjct: 68 MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127
Query: 61 ------------IVITRRYFHDDWKIIMNSLRRQIKSTFTHDSFHAENTLITFSEPWNAK 120
+VI RR FHDDWK+IMNS ++Q +++FT++ FHAE LI FSE NAK
Sbjct: 128 QISVKRLPLENAVVIRRRLFHDDWKVIMNSHKKQTETSFTYNPFHAEKALIIFSEHQNAK 187
Query: 121 FLCSKTGWTTVEKFHVKFKFWPIEKHAAQKLILSYGDRISFRGIPIHAWNMDTFIQIGDA 180
LCS T WTT+ KF VKF+FW IEKHA QKLI SYG +SFRGIPIH WN+DTF+QIG++
Sbjct: 188 SLCSNTRWTTIIKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTFLQIGNS 247
Query: 181 CGGFIDVDKTTIDI-----------YNYCGFILATIRIKDKDDHFFVVHTVTICSGKWLV 240
G ++V+K T+++ YNY GFILATIRIKDKD HFFVVHTVTICSGKWL
Sbjct: 248 SEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDGHFFVVHTVTICSGKWLA 307
Query: 241 ERDVKIHGSFKRQATIDFNELNPKAEQYQFVRDLAIPIDEFKKLNPSELMAELTATENPI 300
ERDVKIHGSFKRQ I+F++ N KAEQ+ F RDLAI +FK LM ELT E+P
Sbjct: 308 ERDVKIHGSFKRQVAIEFDKFNSKAEQFNFTRDLAISPGKFKITRNMVLMTELTNEEDPT 367
Query: 301 IAKDIKERNPIKSGKKDFKRPKMVERWMKKMNELNSSNDEESNDKENLIERFNEKDNESF 360
I K I + + KS KK+ KR K+VERWM+K + SSNDEES + E+ E N DNES
Sbjct: 368 ITKKIYDGDLPKSSKKNSKRLKLVERWMEKRAVITSSNDEESFNHEHSFEGINVADNESL 427
Query: 361 KVGSKRKPPLSSQIKRKKELDEEITDSSLDVDAAPNINKSDNEERAIQNENS---RGDG- 415
+ G KRK +E ITDSS DV S ++ QN NS G G
Sbjct: 428 RSGGKRK-------------EEYITDSSTDV--VKETQDSTTKKVTTQNNNSTDFEGRGV 487
BLAST of IVF0001177 vs. ExPASy TrEMBL
Match:
A0A5A7UN08 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001290 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 3.9e-52
Identity = 137/334 (41.02%), Postives = 181/334 (54.19%), Query Frame = 0
Query: 1 MINPNIEIEPKVR-LLDHLDKRGKSYASSDSNSDSSRKSYATVVSQGYS----------- 60
MI PN+E EPKVR LDH K+ ++ A+ DS+SDSSRKSYA VVS+GYS
Sbjct: 68 MIIPNVETEPKVRHPLDHFFKK-RNIATIDSDSDSSRKSYARVVSEGYSSDSSACSEIKK 127
Query: 61 ------------IVITRRYFHDDWKIIMNSLRRQIKSTFTHDSFHAENTLITFSEPWNAK 120
+VITRR F+DDWK+IMNSL+RQ +STFT+ F+AE LI F +PWN K
Sbjct: 128 QRSVKLLPLKNAVVITRRLFYDDWKVIMNSLKRQTESTFTYHPFNAEKALIIFKDPWNVK 187
Query: 121 FLCSKTGWTTVEKFHVKFKFWPIEKHAAQKLILSYGDRISFRGIPIHAWNMDTFIQIGDA 180
LCS GWT+ EKF NMDTF+QIG+A
Sbjct: 188 SLCSNVGWTSDEKFQ----------------------------------NMDTFLQIGNA 247
Query: 181 CGGFIDVDKTTIDI-----------YNYCGFILATIRIKDKDDHFFVVHTVTICSGKWLV 240
C G +VDK T+++ YNYCGFI ATIRIKDK+ H FVVH+VTICSGKWL
Sbjct: 248 CRGSFEVDKATMNMENLLEAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSVTICSGKWLA 307
Query: 241 ERDVKIHGSFKRQATI--DFNELNPKAEQYQFVRDLAIPIDEFKKLNPSELMAELTATEN 298
ERDVKIH I + + +P+ ++ Q P E + + ++E+
Sbjct: 308 ERDVKIHDKSDSSPDIIKETQDTDPQKDEAQIA----------NTNGPQEKVLPIASSED 345
BLAST of IVF0001177 vs. ExPASy TrEMBL
Match:
A0A5D3DW73 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00070 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 5.2e-52
Identity = 137/334 (41.02%), Postives = 181/334 (54.19%), Query Frame = 0
Query: 1 MINPNIEIEPKVR-LLDHLDKRGKSYASSDSNSDSSRKSYATVVSQGYS----------- 60
MI PN+E EPKVR LDH K+ ++ A+ DS+SDSSRKSYA VVS+GYS
Sbjct: 68 MIIPNVETEPKVRHPLDHFFKK-RNIATIDSDSDSSRKSYARVVSEGYSSDSSACSEIKK 127
Query: 61 ------------IVITRRYFHDDWKIIMNSLRRQIKSTFTHDSFHAENTLITFSEPWNAK 120
+VITRR F+DDWK+IMNSL+RQ +STFT+ F+AE LI F +PWN K
Sbjct: 128 QRSVKLLPLENAVVITRRLFYDDWKVIMNSLKRQTESTFTYHPFNAEKALIIFKDPWNMK 187
Query: 121 FLCSKTGWTTVEKFHVKFKFWPIEKHAAQKLILSYGDRISFRGIPIHAWNMDTFIQIGDA 180
LCS GWT+ EKF NMDTF+QIG+A
Sbjct: 188 SLCSNVGWTSDEKFQ----------------------------------NMDTFLQIGNA 247
Query: 181 CGGFIDVDKTTIDI-----------YNYCGFILATIRIKDKDDHFFVVHTVTICSGKWLV 240
C G +VDK T+++ YNYCGFI ATIRIKDK+ H FVVH+VTICSGKWL
Sbjct: 248 CRGSFEVDKATMNMENLLEAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSVTICSGKWLA 307
Query: 241 ERDVKIHGSFKRQATI--DFNELNPKAEQYQFVRDLAIPIDEFKKLNPSELMAELTATEN 298
ERDVKIH I + + +P+ ++ Q P E + + ++E+
Sbjct: 308 ERDVKIHDKSDSSPDIIKETQDTDPQKDEAQIA----------NTNGPQEKVLPIASSED 345
BLAST of IVF0001177 vs. ExPASy TrEMBL
Match:
A0A5A7SVM5 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00850 PE=4 SV=1)
HSP 1 Score: 206.8 bits (525), Expect = 1.8e-49
Identity = 105/229 (45.85%), Postives = 149/229 (65.07%), Query Frame = 0
Query: 24 SYASSD------SNSDSSRKSYATVVSQGYSIVITRRYFHDDWKIIMNSLRRQIKSTFTH 83
SYASSD S+ +S R S + V+ + ++V+ RR+FHDDW+ I+ +LR+Q + +FT+
Sbjct: 179 SYASSDSSHSSHSSGNSPRDSPSPVLLEN-TVVLVRRFFHDDWQKILQNLRKQTEESFTY 238
Query: 84 DSFHAENTLITFSEPWNAKFLCSKTGWTTVEKFHVKFKFWPIEKHAAQKLILSYGDRISF 143
++FHAE L+ F+ A LC GWTTV K+ V+F+ W HA+ KLI SYG +F
Sbjct: 239 NAFHAEKALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPSYGGWTTF 298
Query: 144 RGIPIHAWNMDTFIQIGDACGGFIDV---DKTTIDI--------YNYCGFILATIRIKDK 203
RGIP+H WNM TF QIG ACGG + V KT ++ YNY GF+ A ++I D+
Sbjct: 299 RGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQ 358
Query: 204 DDHFFVVHTVTICSGKWLVERDVKIHGSFKRQATIDFNELNPKAEQYQF 236
+ + FVV +T GKWL+ER+V++HG+FKRQA F+E NP +EQ+ F
Sbjct: 359 EGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLF 406
BLAST of IVF0001177 vs. NCBI nr
Match:
KAA0035766.1 (hypothetical protein E6C27_scaffold403G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 407 bits (1046), Expect = 4.56e-134
Identity = 236/450 (52.44%), Postives = 294/450 (65.33%), Query Frame = 0
Query: 1 MINPNIEIEPKVRL-LDHLDKRGKSYASSDSNSDSSRKSYATVVSQGYS----------- 60
M+NPN++ EPK R L+H K+GKS AS+DS+SDSSRKS A VVS+GYS
Sbjct: 68 MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127
Query: 61 ------------IVITRRYFHDDWKIIMNSLRRQIKSTFTHDSFHAENTLITFSEPWNAK 120
+VITRR FHDDWK+IMNSL++Q K++FT++ FHAE LI FSE NAK
Sbjct: 128 QRSVKTLPLENAVVITRRLFHDDWKVIMNSLKKQTKTSFTYNPFHAEKALIIFSEHQNAK 187
Query: 121 FLCSKTGWTTVEKFHVKFKFWPIEKHAAQKLILSYGDRISFRGIPIHAWNMDTFIQIGDA 180
LCS T WTT+ KF VKF+FW IEKHA QKLI SYG +SFRGIPIH WN+DTF+QIG++
Sbjct: 188 SLCSNTRWTTISKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTFLQIGNS 247
Query: 181 CGGFIDVDKTTIDI-----------YNYCGFILATIRIKDKDDHFFVVHTVTICSGKWLV 240
G ++V+K T+++ YNY GFILATIRIKDKD HFFVVHTVTICSGKWL
Sbjct: 248 SEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDVHFFVVHTVTICSGKWLA 307
Query: 241 ERDVKIHGSFKRQATIDFNELNPKAEQYQFVRDLAIPIDEFKKLNPSELMAELTATENPI 300
+RDVKIHGSFKRQ I+F++ N KAEQ+ F DLAI +FK LM ELT E+P
Sbjct: 308 KRDVKIHGSFKRQVAIEFDKFNSKAEQFNFTGDLAISPGKFKITRNMVLMTELTNEEDPT 367
Query: 301 IAKDIKERNPIKSGKKDFKRPKMVERWMKKMNELNSSNDEESNDKENLIERFNEKDNESF 360
I K I + + KS KK+ KR K+VERWM+K + SSNDEES + E+ E N DNES
Sbjct: 368 ITKKIYDGDLPKSSKKNSKRLKLVERWMEKRAVITSSNDEESFNHEHSFEGINVADNESL 427
Query: 361 KVGSKRKPPLSSQIKRKKELDEEITDSSLDVDAAPNINKSDNEERAIQNENSRGDGK-NE 414
++G KRK + ++ +E DS+ N N +D E R +Q + E
Sbjct: 428 RLGGKRKEEYITDFST--DVVKETQDSTTKKVTTQNNNSTDFEGRGVQTLPTEVVMVYKE 487
BLAST of IVF0001177 vs. NCBI nr
Match:
TYK29852.1 (hypothetical protein E5676_scaffold208G00930 [Cucumis melo var. makuwa])
HSP 1 Score: 404 bits (1037), Expect = 1.04e-132
Identity = 241/463 (52.05%), Postives = 293/463 (63.28%), Query Frame = 0
Query: 1 MINPNIEIEPKVRL-LDHLDKRGKSYASSDSNSDSSRKSYATVVSQGYS----------- 60
M+NPN++ EPK R L+H K+GKS AS+DS+SDSSRKS A VVS+GYS
Sbjct: 68 MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127
Query: 61 ------------IVITRRYFHDDWKIIMNSLRRQIKSTFTHDSFHAENTLITFSEPWNAK 120
+VI RR FHDDWK+IMNS ++Q +++FT++ FHAE LI FSE NAK
Sbjct: 128 QISVKRLPLENAVVIRRRLFHDDWKVIMNSHKKQTETSFTYNPFHAEKALIIFSEHQNAK 187
Query: 121 FLCSKTGWTTVEKFHVKFKFWPIEKHAAQKLILSYGDRISFRGIPIHAWNMDTFIQIGDA 180
LCS T WTT+ KF VKF+FW IEKHA QKLI SYG +SFRGIPIH WN+DTF+QIG++
Sbjct: 188 SLCSNTRWTTIIKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTFLQIGNS 247
Query: 181 CGGFIDVDKTTIDI-----------YNYCGFILATIRIKDKDDHFFVVHTVTICSGKWLV 240
G ++V+K T+++ YNY GFILATIRIKDKD HFFVVHTVTICSGKWL
Sbjct: 248 SEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDGHFFVVHTVTICSGKWLA 307
Query: 241 ERDVKIHGSFKRQATIDFNELNPKAEQYQFVRDLAIPIDEFKKLNPSELMAELTATENPI 300
ERDVKIHGSFKRQ I+F++ N KAEQ+ F RDLAI +FK LM ELT E+P
Sbjct: 308 ERDVKIHGSFKRQVAIEFDKFNSKAEQFNFTRDLAISPGKFKITRNMVLMTELTNEEDPT 367
Query: 301 IAKDIKERNPIKSGKKDFKRPKMVERWMKKMNELNSSNDEESNDKENLIERFNEKDNESF 360
I K I + + KS KK+ KR K+VERWM+K + SSNDEES + E+ E N DNES
Sbjct: 368 ITKKIYDGDLPKSSKKNSKRLKLVERWMEKRAVITSSNDEESFNHEHSFEGINVADNESL 427
Query: 361 KVGSKRKPPLSSQIKRKKELDEEITDSSLDVDAAPNINKSDNEERAIQNENS---RGDGK 414
+ G KRK +E ITDSS DV S ++ QN NS G G
Sbjct: 428 RSGGKRK-------------EEYITDSSTDV--VKETQDSTTKKVTTQNNNSTDFEGRGV 487
BLAST of IVF0001177 vs. NCBI nr
Match:
TYK26098.1 (hyoscyamine 6-dioxygenase-like [Cucumis melo var. makuwa])
HSP 1 Score: 207 bits (527), Expect = 1.67e-60
Identity = 110/172 (63.95%), Postives = 124/172 (72.09%), Query Frame = 0
Query: 116 FWPIEKHAAQKLILSYGDRISFRGIPIHAWNMDTFIQIGDACGGFIDVDKTTIDI----- 175
F IEK+ QKLI SYG ISF GIPIHAWNMDTFIQIG+ACG +VDK T+D+
Sbjct: 60 FQSIEKYVGQKLIPSYGGWISFWGIPIHAWNMDTFIQIGNACGVLEEVDKVTMDMVNLNE 119
Query: 176 ------YNYCGFILATIRIKDKDDHFF-VVHTVTICSGKWLVERDVKIHGSFKRQATIDF 235
YNY GFI IRIKDKDDHFF HTVTICSGKWL +RDVKIHG FKRQA I F
Sbjct: 120 AKIKVKYNYYGFIPTAIRIKDKDDHFFRSTHTVTICSGKWLAKRDVKIHGPFKRQAAIYF 179
Query: 236 NELNP-KAEQYQFVRDLAIPIDEFKKLNPSELMAELTATENPIIAKDIKERN 274
++ NP KAEQ+ FV DLAIP EF++L LMAELT E+P +AKDI ER+
Sbjct: 180 DDFNPIKAEQFIFVGDLAIPTGEFERLKNRALMAELTKEEDPTLAKDIYERD 231
BLAST of IVF0001177 vs. NCBI nr
Match:
KAA0055987.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 214 bits (545), Expect = 3.03e-59
Identity = 123/247 (49.80%), Postives = 147/247 (59.51%), Query Frame = 0
Query: 1 MINPNIEIEPKVRL-LDHLDKRGKSYASSDSNSDSSRKSYATVVSQGYS----------- 60
MI PN+E EPKVR LDH K+ ++ A+ DS+SDSSRKSYA VVS+GYS
Sbjct: 68 MIIPNVETEPKVRHPLDHFFKK-RNIATIDSDSDSSRKSYARVVSEGYSSDSSACSEIKK 127
Query: 61 ------------IVITRRYFHDDWKIIMNSLRRQIKSTFTHDSFHAENTLITFSEPWNAK 120
+VITRR F+DDWK+IMNSL+RQ +STFT+ F+AE LI F +PWN K
Sbjct: 128 QRSVKLLPLKNAVVITRRLFYDDWKVIMNSLKRQTESTFTYHPFNAEKALIIFKDPWNVK 187
Query: 121 FLCSKTGWTTVEKFHVKFKFWPIEKHAAQKLILSYGDRISFRGIPIHAWNMDTFIQIGDA 180
LCS GWT+ EKF NMDTF+QIG+A
Sbjct: 188 SLCSNVGWTSDEKFQ----------------------------------NMDTFLQIGNA 247
Query: 181 CGGFIDVDKTTIDI-----------YNYCGFILATIRIKDKDDHFFVVHTVTICSGKWLV 212
C G +VDK T+++ YNYCGFI ATIRIKDK+ H FVVH+VTICSGKWL
Sbjct: 248 CRGSFEVDKATMNMENLLEAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSVTICSGKWLA 279
BLAST of IVF0001177 vs. NCBI nr
Match:
TYK27679.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 214 bits (544), Expect = 4.23e-59
Identity = 123/247 (49.80%), Postives = 147/247 (59.51%), Query Frame = 0
Query: 1 MINPNIEIEPKVRL-LDHLDKRGKSYASSDSNSDSSRKSYATVVSQGYS----------- 60
MI PN+E EPKVR LDH K+ ++ A+ DS+SDSSRKSYA VVS+GYS
Sbjct: 68 MIIPNVETEPKVRHPLDHFFKK-RNIATIDSDSDSSRKSYARVVSEGYSSDSSACSEIKK 127
Query: 61 ------------IVITRRYFHDDWKIIMNSLRRQIKSTFTHDSFHAENTLITFSEPWNAK 120
+VITRR F+DDWK+IMNSL+RQ +STFT+ F+AE LI F +PWN K
Sbjct: 128 QRSVKLLPLENAVVITRRLFYDDWKVIMNSLKRQTESTFTYHPFNAEKALIIFKDPWNMK 187
Query: 121 FLCSKTGWTTVEKFHVKFKFWPIEKHAAQKLILSYGDRISFRGIPIHAWNMDTFIQIGDA 180
LCS GWT+ EKF NMDTF+QIG+A
Sbjct: 188 SLCSNVGWTSDEKFQ----------------------------------NMDTFLQIGNA 247
Query: 181 CGGFIDVDKTTIDI-----------YNYCGFILATIRIKDKDDHFFVVHTVTICSGKWLV 212
C G +VDK T+++ YNYCGFI ATIRIKDK+ H FVVH+VTICSGKWL
Sbjct: 248 CRGSFEVDKATMNMENLLEAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSVTICSGKWLA 279
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T0M9 | 1.4e-110 | 52.44 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3E1T4 | 1.2e-109 | 52.05 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7UN08 | 3.9e-52 | 41.02 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3DW73 | 5.2e-52 | 41.02 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7SVM5 | 1.8e-49 | 45.85 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
Match Name | E-value | Identity | Description | |
KAA0035766.1 | 4.56e-134 | 52.44 | hypothetical protein E6C27_scaffold403G00440 [Cucumis melo var. makuwa] | [more] |
TYK29852.1 | 1.04e-132 | 52.05 | hypothetical protein E5676_scaffold208G00930 [Cucumis melo var. makuwa] | [more] |
TYK26098.1 | 1.67e-60 | 63.95 | hyoscyamine 6-dioxygenase-like [Cucumis melo var. makuwa] | [more] |
KAA0055987.1 | 3.03e-59 | 49.80 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
TYK27679.1 | 4.23e-59 | 49.80 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |