IVF0001154 (gene) Melon (IVF77) v1

Overview
NameIVF0001154
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Locationchr09: 14569965 .. 14572591 (+)
RNA-Seq ExpressionIVF0001154
SyntenyIVF0001154
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTCAATGGGGGGCTGGAAATCAGATAATGGTACATTTCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATTGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGGTATGGAATATAATTTAAACGTCACACAACGTTAACAATTTACATTTAGTAAACAATTTTTAAATTAGTACTCATACGTCATATTTTTTTCTGCCCGCAGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTTGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGATGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATGTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGCAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTCCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAGTTTCTGTTTGTAGTGACCTGTGTTGCTTATTATTTCGTTACGTATTTTTCTGTATCATGTATTCGATGGTTTATGCATTTTGTATTGTCAAGAACTTCTTTTGTTCATTCCTAATGTTTATTTTAAATGAAAGAAACTAGTCAGAATTTTCGAAAAGCGTTATAACGGCTATTTATATAGGTTTAAAATTGGATGACTTCGCTATCGGCCATTCGAAATATTGAATAATTTTTTATCTTTATAAGAAATTAATTGTAATAAATTTATCACAATATGTTCAGAAATTAATTTTAATTTGGCCAACTGTATATTAATTTAATAACATTACACATACAACAAATAAAATAGGAGAATAATACGGATTCGAGGATTTCGTAAAAAAATATGCAATAATTTTTTTATGATATTTACAATTGAATTTAAAAATATTATACAACATAAAAAATTAATTAACCCACCCCATTTAACAATTTTCCCAAATAAAATTTATCACAAAATCCACATAAACCTACCCACTTAACCCTTCCCCCAAACACATTTTATCATAAAATTCCCATAAAACTACCCACCTAACCCTTCCCCCAAACACATTTTATCATAAAATCCCCATTAAACTACCCACCTAACCCTTCCCCCAAACACATCTTATCATAAAATCCCCATTAATCCTCCCCACCTAACCCTTCCCCCAAACACATTTATCATAAAATCCCCATTAACTCTTCCCACCTAACCCTTCCCCCAAACACATATTATCATAAAACTACCTTTTTAAACCCTTCCCCCAAACAAGGGTATGATAAAACTAGGTTTAACTTAACACTAGTTTTATCTTAACACTAACCCTTCCCTAAATCAACCCTTCCCCCAAACGCACCCTAAATGATCGGCAACCTACATGTCTAGTCTTGTTTTGGCTCGATCACTTTTTCCTCAAACCTATTTTCAACAGGTTGTCAACACTCTTTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTTTTTCATTTGTTCAAAGTTTACTGTACATAGCCAGAGCAATCATCGGGTGTTCTTTTGTTCTTTTCGGTTGAATGGACAATGAATTTGTGTTCTTTTAGCATTTGTGTGAATTAAATTAATAAAATATATTGTGATTGTGAGTGTAATTAGTGGCTCCCTGGCTTTCATAGCAAATGCATCACATGTAAATCATTCAACCAAAAAAAAAAAAAAAGAAAAGAAAGATTAAACATAGATTCGTAAATGGTTTAGCAGGTGATAGTAGCGATAGTAGAAAGAGAATTCCAATGAACCAAAAAGTTCAAGATCCCAACCTTAAAATGTCAAAGGTCCCTTGAGATCTATTTAGAAGATCGGAATGTAATTCGATACAATAAAAATATTAAAACTGGTGTTAATTGTGTGAAAAACTGAAATGAGGGTTGAGTTGAAATGAAGGAAAAAAATATAATGGAGGTTCAAAGTTTTCGATTTGTCATGATAGCTAATTGCAAGACTTATGCACAAATAGAGATAAAAGACATATAA

mRNA sequence

ATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTCAATGGGGGGCTGGAAATCAGATAATGGTACATTTCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATTGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTTGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGATGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATGTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGCAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTCCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTTCAAAGTTTTCGATTTGTCATGATAGCTAATTGCAAGACTTATGCACAAATAGAGATAAAAGACATATAA

Coding sequence (CDS)

ATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTCAATGGGGGGCTGGAAATCAGATAATGGTACATTTCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATTGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTTGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGATGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATGTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGCAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTCCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTTCAAAGTTTTCGATTTGTCATGATAGCTAATTGCAAGACTTATGCACAAATAGAGATAAAAGACATATAA

Protein sequence

MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVQSFRFVMIANCKTYAQIEIKDI
Homology
[Close]
BLAST of IVF0001154 vs. ExPASy TrEMBL
Match: A0A5D3CWL2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00640 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.6e-172
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240

Query: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 300
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299

[Close]
BLAST of IVF0001154 vs. ExPASy TrEMBL
Match: A0A5D3BCN9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001070 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.6e-172
Identity = 298/299 (99.67%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIH+ALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLREIAQWPA 240

Query: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 300
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299

[Close]
BLAST of IVF0001154 vs. ExPASy TrEMBL
Match: A0A5A7T9G6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002710 PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 4.7e-172
Identity = 298/299 (99.67%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240

Query: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 300
           RNLANDNHVRTEFFRILR+MPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV
Sbjct: 241 RNLANDNHVRTEFFRILRKMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299

[Close]
BLAST of IVF0001154 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 2.3e-171
Identity = 296/299 (99.00%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240
           VDISQDDVRASRPSRAS+GRTGSSGSKRKRGSQRDFELEAIH+ALDQTNEQLREIA+WPA
Sbjct: 181 VDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLREIAEWPA 240

Query: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 300
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299

[Close]
BLAST of IVF0001154 vs. ExPASy TrEMBL
Match: A0A5A7SRU1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold708G00100 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 2.3e-171
Identity = 298/317 (94.01%), Postives = 304/317 (95.90%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240
           VDISQDDVRASRPSRAS+GRTGSSGSKRKRGSQRDFELEAIH+ALDQTNEQLR+IA+WPA
Sbjct: 181 VDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPA 240

Query: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVQ 300
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 300

Query: 301 ----SFRFVMIANCKTY 314
                  F+ +  C  Y
Sbjct: 301 LRDIERLFLFVVTCVAY 317

[Close]
BLAST of IVF0001154 vs. NCBI nr
Match: KAA0031555.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0036352.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0043921.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047622.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0049406.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 612 bits (1578), Expect = 1.19e-220
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240

Query: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299

[Close]
BLAST of IVF0001154 vs. NCBI nr
Match: TYJ96194.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96764.1 retrotransposon protein [Cucumis melo var. makuwa] >TYJ97116.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK01046.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK12167.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 611 bits (1575), Expect = 3.41e-220
Identity = 298/299 (99.67%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIH+ALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLREIAQWPA 240

Query: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299

[Close]
BLAST of IVF0001154 vs. NCBI nr
Match: KAA0038065.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 610 bits (1574), Expect = 4.85e-220
Identity = 298/299 (99.67%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240

Query: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299
           RNLANDNHVRTEFFRILR+MPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV
Sbjct: 241 RNLANDNHVRTEFFRILRKMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299

[Close]
BLAST of IVF0001154 vs. NCBI nr
Match: KAA0033744.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046274.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0049705.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0057135.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 608 bits (1568), Expect = 3.98e-219
Identity = 296/299 (99.00%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240
           VDISQDDVRASRPSRAS+GRTGSSGSKRKRGSQRDFELEAIH+ALDQTNEQLREIA+WPA
Sbjct: 181 VDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLREIAEWPA 240

Query: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299

[Close]
BLAST of IVF0001154 vs. NCBI nr
Match: KAA0044610.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 607 bits (1565), Expect = 1.14e-218
Identity = 295/299 (98.66%), Postives = 298/299 (99.67%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIH+ALDQTNEQLR+IA+WPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPA 240

Query: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRV 299
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHL SRMDDLRGFVLMPEDEREGFCRV
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLFSRMDDLRGFVLMPEDEREGFCRV 299

[Close]
BLAST of IVF0001154 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-09
Identity = 62/244 (25.41%), Postives = 101/244 (41.39%), Query Frame = 0 

Query: 12  WTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAE-KLPGCQVRATTVIDCR 71
           W+ EE   LV+ L+E ++   W+  NGT     L    + M E     C+ +       R
Sbjct: 17  WSPEETKLLVQLLVEGIN-NNWRDSNGTI--SKLTVETKFMPEINKEFCRSKNYNHYLSR 76

Query: 72  IKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYD 131
           +K LK  +Q+  +++    SGFGW+   K   A  E++ +++++HP  K L    F ++D
Sbjct: 77  MKYLKIQYQSCLDLQ-RFSSGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFFD 136

Query: 132 ELTYVFGRDRATGRFAETFAD--------VGSNEPGGGYDRFD---------MGDGNEDF 191
           EL  +FG   ATG+ A    D         G N      D FD           + +E +
Sbjct: 137 ELQIIFGEGVATGKNAIGLCDSTDGLTYRAGENPRKEYVDDFDNVYEYDTTTHHESSEHY 196

Query: 192 PPVYSQGVDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLR 238
            P  S G   S        P R    R+  S S+++         + + +   +   Q  
Sbjct: 197 APFMSHGTSES-----PKLPPRKRT-RSERSTSQKEESPMMVVSSKILDIIQQREERQQN 250

[Close]
BLAST of IVF0001154 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-08
Identity = 35/137 (25.55%), Postives = 66/137 (48.18%), Query Frame = 0 

Query: 9   RHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVID 68
           R  WT   +  L++ L+E V+ G       TF      ++V     K  G Q     V+ 
Sbjct: 324 RIFWTPPMDYHLIDLLVEQVNNGNRVGQ--TFITSAWNEMVTAFNAKF-GSQ-HNKDVLK 383

Query: 69  CRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPY 128
            R K L+R +  I  +     +GF W+     ++A+ ++++ ++++HP A+    K  P 
Sbjct: 384 NRYKHLRRLYNDIKFLLEQ--NGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPS 443

Query: 129 YDELTYVFGRDRATGRF 146
           Y  L ++FG++ + GR+
Sbjct: 444 YPNLCFIFGKETSDGRY 454

[Close]
BLAST of IVF0001154 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 9.4e-08
Identity = 41/169 (24.26%), Postives = 72/169 (42.60%), Query Frame = 0 

Query: 5   NRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRA- 64
           N   R VWT E +   +E ++E V  G    D+          L    A K   C   A 
Sbjct: 7   NERLRTVWTPEMDQYFIELMVEQVRKGNRFEDH----------LFSKRAWKFMSCSFTAK 66

Query: 65  ------TTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPA 124
                   V+  R KTL+  F+++  +      GF W+D  + +VA+  ++D +++ HP 
Sbjct: 67  FKFLYGKDVLKNRHKTLRNLFKSVNNLL--IEDGFSWDDTRQMVVADNCVWDEYLKIHPD 126

Query: 125 AKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSN---EPGGGYDR 164
           ++    K  P Y +L  V+    +  +  E+ ++  S    +   GY+R
Sbjct: 127 SRSFRIKSIPCYKDLCLVYSDGMSEHKAEESISEGESKTLIQEDDGYNR 163

[Close]
BLAST of IVF0001154 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 55.5 bits (132), Expect = 9.4e-08
Identity = 41/169 (24.26%), Postives = 72/169 (42.60%), Query Frame = 0 

Query: 5   NRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRA- 64
           N   R VWT E +   +E ++E V  G    D+          L    A K   C   A 
Sbjct: 7   NERLRTVWTPEMDQYFIELMVEQVRKGNRFEDH----------LFSKRAWKFMSCSFTAK 66

Query: 65  ------TTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPA 124
                   V+  R KTL+  F+++  +      GF W+D  + +VA+  ++D +++ HP 
Sbjct: 67  FKFLYGKDVLKNRHKTLRNLFKSVNNLL--IEDGFSWDDTRQMVVADNCVWDEYLKIHPD 126

Query: 125 AKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSN---EPGGGYDR 164
           ++    K  P Y +L  V+    +  +  E+ ++  S    +   GY+R
Sbjct: 127 SRSFRIKSIPCYKDLCLVYSDGMSEHKAEESISEGESKTLIQEDDGYNR 163

[Close]
BLAST of IVF0001154 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 7.5e-05
Identity = 31/151 (20.53%), Postives = 65/151 (43.05%), Query Frame = 0 

Query: 2   STSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQV 61
           +T N   R  WT   E   ++ ++E +  G       TF      +++ +   K  G Q 
Sbjct: 5   TTCNDRTRTYWTPTMERFFIDLMLEHLHRG--NRTGHTFNKQAWNEMLTVFNSKF-GSQY 64

Query: 62  RATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGL 121
               V+  R   L + +  +  +      GF W+   + ++ +  L+  ++++HP A+  
Sbjct: 65  -DKDVLKSRYTNLWKQYNDVKCLLDH--GGFVWDQTHQTVIGDDSLWSLYLKAHPEARVY 124

Query: 122 LNKPFPYYDELTYVFGRDRATGRFAETFADV 153
             KP   + +L  ++G   A GR++ +  D+
Sbjct: 125 KTKPVLNFSDLCLIYGYTVADGRYSMSSHDL 149

The following BLAST results are available for this feature:
BLAST of IVF0001154 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0001154 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CWL21.6e-172100.00Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BCN93.6e-17299.67Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T9G64.7e-17299.67Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TRV12.3e-17199.00Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SRU12.3e-17194.01Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of IVF0001154 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0031555.11.19e-220100.00retrotransposon protein [Cucumis melo var. makuwa] >KAA0036352.1 retrotransposon... [more]
TYJ96194.13.41e-22099.67retrotransposon protein [Cucumis melo var. makuwa] >TYJ96764.1 retrotransposon p... [more]
KAA0038065.14.85e-22099.67retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0033744.13.98e-21999.00retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon... [more]
KAA0044610.11.14e-21898.66retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of IVF0001154 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27260.11.0e-0925.41unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.21.9e-0825.55unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G02210.19.4e-0824.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.29.4e-0824.26unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G24960.17.5e-0520.53unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 12..110
e-value: 2.3E-7
score: 31.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..214
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 2..298
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 2..298

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001154.1IVF0001154.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane