IVF0001109 (gene) Melon (IVF77) v1

Overview
NameIVF0001109
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPathogenesis-related protein PR-4-like
Locationchr05: 24678535 .. 24679234 (+)
RNA-Seq ExpressionIVF0001109
SyntenyIVF0001109
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAAAGCTCAAAGTGGGAGTAACGTTAGAGCAACATTTAACTTATACAATGCTCCACAAATCAATTGGGATTTGAATGCTGTGAGTGCATTTTGTTCAACTTGGGATGCAAATAAACCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTATTGGACCTCATGGCCAAGACTCTTGTGGCCTATGTTTATTAGTATGTGTTTTCACACCATTTATTAATTGGCTACGCTTACGATCGGTTTGAAACAACTTTAAAATATCATACGTAAACATTATTTAGAAAGGTATATCCATCACCTTTTTCCCTTATCAACAACATCGGACTTGCATTATACCACATACCTTTAACAAGTTCTTTTTACGTTCGTCGTTTTTGTCATGTGTACGTATTAAAAATTAGTTTTATCCACAAAGATTTAATATATCTTATTAAATTATTTTGCATATATATGTGTGGATGAAAGATGATAATAATTTGTCTGATGGCGAATACAATTAATTAAAGCATGAATATGCAGGTGACTAATGTTCAAACAGGAGTTCAAGAAACAGTGAGAATTGTAGATCAATGTAGTAATGGAGGGTTAGATTTGGACGTTGGAGTGTTTCAAAGTCTCGACACCGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTGAACTATGATTTTGTGAATTGTTGA

mRNA sequence

ATGTCCAAAGCTCAAAGTGGGAGTAACGTTAGAGCAACATTTAACTTATACAATGCTCCACAAATCAATTGGGATTTGAATGCTGTGAGTGCATTTTGTTCAACTTGGGATGCAAATAAACCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTATTGGACCTCATGGCCAAGACTCTTGTGGCCTATGTTTATTAGTGACTAATGTTCAAACAGGAGTTCAAGAAACAGTGAGAATTGTAGATCAATGTAGTAATGGAGGGTTAGATTTGGACGTTGGAGTGTTTCAAAGTCTCGACACCGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTGAACTATGATTTTGTGAATTGTTGA

Coding sequence (CDS)

ATGTCCAAAGCTCAAAGTGGGAGTAACGTTAGAGCAACATTTAACTTATACAATGCTCCACAAATCAATTGGGATTTGAATGCTGTGAGTGCATTTTGTTCAACTTGGGATGCAAATAAACCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTATTGGACCTCATGGCCAAGACTCTTGTGGCCTATGTTTATTAGTGACTAATGTTCAAACAGGAGTTCAAGAAACAGTGAGAATTGTAGATCAATGTAGTAATGGAGGGTTAGATTTGGACGTTGGAGTGTTTCAAAGTCTCGACACCGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTGAACTATGATTTTGTGAATTGTTGA

Protein sequence

MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
Homology
[Close]
BLAST of IVF0001109 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-50
Identity = 86/119 (72.27%), Postives = 98/119 (82.35%), Query Frame = 0 

Query: 6   SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSC 65
           S  NVRAT+++YN   + WDLNAVSA+CSTWDANKPL WR +YGWTAFCGP+GP G+DSC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 66  GLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC 125
           G CL VTN +TG Q TVRIVDQCSNGGLDLDV VF+ +DTDGNGN  G L VNY FV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]
BLAST of IVF0001109 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.9e-50
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 0 

Query: 6   SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSC 65
           S  NVRAT+++YN   + WDLNAVSA+CSTWDANKP  WRS+YGWTAFCGP+GP G+DSC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 66  GLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC 125
           G CL VTN +TG Q TVRIVDQCSNGGLDLD+ VFQ +DTDG GN  G L VNY FVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]
BLAST of IVF0001109 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 6.4e-50
Identity = 89/124 (71.77%), Postives = 99/124 (79.84%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           M+ AQS +NVR+T++LYN   INWDL A SAFC+TWDA+KPL WR +YGWTAFCGP GP 
Sbjct: 22  MAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPR 81

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCG CL VTN  TG Q TVRIVDQCSNGGLDLDV VF  LDT+G G   G LTVNY+
Sbjct: 82  GQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNGVGYQQGHLTVNYE 141

Query: 121 FVNC 125
           FVNC
Sbjct: 142 FVNC 145

[Close]
BLAST of IVF0001109 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.2e-49
Identity = 88/124 (70.97%), Postives = 98/124 (79.03%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           M+ AQS +NVR+T++LYN   INWDL A SAFC+TWDA+KPL WR +YGWTAFCGP GP 
Sbjct: 22  MAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPR 81

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCG CL VTN  TG Q TVRIVDQCSNGGLDLDV VF  LDT+G G   G L VNY+
Sbjct: 82  GQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNGLGYQQGHLIVNYE 141

Query: 121 FVNC 125
           FVNC
Sbjct: 142 FVNC 145

[Close]
BLAST of IVF0001109 vs. ExPASy Swiss-Prot
Match: P02877 (Pro-hevein OS=Hevea brasiliensis OX=3981 GN=HEV1 PE=1 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-47
Identity = 84/119 (70.59%), Postives = 94/119 (78.99%), Query Frame = 0 

Query: 6   SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSC 65
           S SNV AT++LYN+    WDLNA SA+CSTWDANKP  WRS+YGWTAFCGP+G HGQ SC
Sbjct: 69  SASNVLATYHLYNSQDHGWDLNAASAYCSTWDANKPYSWRSKYGWTAFCGPVGAHGQSSC 128

Query: 66  GLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC 125
           G CL VTN  TG + TVRIVDQCSNGGLDLDV VF+ LDTDG G   G +TVNY FV+C
Sbjct: 129 GKCLSVTNTGTGAKTTVRIVDQCSNGGLDLDVNVFRQLDTDGKGYERGHITVNYQFVDC 187

[Close]
BLAST of IVF0001109 vs. ExPASy TrEMBL
Match: A0A5D3D4F5 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001530 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH
Sbjct: 20  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 79

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD
Sbjct: 80  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 139

Query: 121 FVNC 125
           FVNC
Sbjct: 140 FVNC 143

[Close]
BLAST of IVF0001109 vs. ExPASy TrEMBL
Match: A0A0A0LG74 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010340 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63
Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWTAFCGP+GP 
Sbjct: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 60

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQ SCGLCLLVTNVQTG Q+TVRIVDQCSNGGLDLDVGVFQSLDTDGNG ANGFLT+NYD
Sbjct: 61  GQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYD 120

Query: 121 FVNC 125
           FVNC
Sbjct: 121 FVNC 124

[Close]
BLAST of IVF0001109 vs. ExPASy TrEMBL
Match: A0A6J1CMK0 (pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC111013008 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.0e-63
Identity = 111/124 (89.52%), Postives = 120/124 (96.77%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           +S+ QSGSNVRAT+NLYNAPQINWDLNAVSAFC+TWDAN+PLEWRSQYGWTAFCGP+GPH
Sbjct: 22  VSEGQSGSNVRATYNLYNAPQINWDLNAVSAFCATWDANQPLEWRSQYGWTAFCGPVGPH 81

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCG CLLVTN +TG Q+TVRIVDQCSNGGLDLDVGVFQSLDT+GNGNANGFLTVNYD
Sbjct: 82  GQDSCGQCLLVTNTETGAQQTVRIVDQCSNGGLDLDVGVFQSLDTNGNGNANGFLTVNYD 141

Query: 121 FVNC 125
           FVNC
Sbjct: 142 FVNC 145

[Close]
BLAST of IVF0001109 vs. ExPASy TrEMBL
Match: A0A6J1KG47 (pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC111493585 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.9e-61
Identity = 109/124 (87.90%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA++PLEWRSQYGWTAFCGP+GP 
Sbjct: 19  LSKAQSASNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCGLCLLVTN +TG Q+TVRIVDQC+NGGLDLDVGVFQSLDTDGNGNANGFL V+YD
Sbjct: 79  GQDSCGLCLLVTNTETGAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLIVDYD 138

Query: 121 FVNC 125
           FV C
Sbjct: 139 FVKC 142

[Close]
BLAST of IVF0001109 vs. ExPASy TrEMBL
Match: A0A6J1G2Y5 (pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC111450308 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.9e-61
Identity = 109/124 (87.90%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA++PLEWRSQYGWTAFCGP+GP 
Sbjct: 19  LSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           G+DSCGLCLLVTN +TG Q+ VRIVDQC+NGGLDLDVGVFQSLDTDGNGNANGFLTV+YD
Sbjct: 79  GEDSCGLCLLVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTVDYD 138

Query: 121 FVNC 125
           FVNC
Sbjct: 139 FVNC 142

[Close]
BLAST of IVF0001109 vs. NCBI nr
Match: KAA0063600.1 (pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18427.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (678), Expect = 1.86e-89
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH
Sbjct: 20  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 79

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD
Sbjct: 80  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 139

Query: 121 FVNC 124
           FVNC
Sbjct: 140 FVNC 143

[Close]
BLAST of IVF0001109 vs. NCBI nr
Match: KAE8651558.1 (hypothetical protein Csa_019464 [Cucumis sativus])

HSP 1 Score: 249 bits (635), Expect = 4.81e-83
Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWTAFCGP+GP 
Sbjct: 10  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 69

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQ SCGLCLLVTNVQTG Q+TVRIVDQCSNGGLDLDVGVFQSLDTDGNG ANGFLT+NYD
Sbjct: 70  GQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYD 129

Query: 121 FVNC 124
           FVNC
Sbjct: 130 FVNC 133

[Close]
BLAST of IVF0001109 vs. NCBI nr
Match: XP_004139240.1 (pathogenesis-related protein PR-4 [Cucumis sativus])

HSP 1 Score: 249 bits (635), Expect = 6.72e-83
Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWTAFCGP+GP 
Sbjct: 20  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 79

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQ SCGLCLLVTNVQTG Q+TVRIVDQCSNGGLDLDVGVFQSLDTDGNG ANGFLT+NYD
Sbjct: 80  GQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYD 139

Query: 121 FVNC 124
           FVNC
Sbjct: 140 FVNC 143

[Close]
BLAST of IVF0001109 vs. NCBI nr
Match: XP_022143020.1 (pathogenesis-related protein PR-4-like [Momordica charantia])

HSP 1 Score: 247 bits (630), Expect = 4.16e-82
Identity = 111/124 (89.52%), Postives = 120/124 (96.77%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           +S+ QSGSNVRAT+NLYNAPQINWDLNAVSAFC+TWDAN+PLEWRSQYGWTAFCGP+GPH
Sbjct: 22  VSEGQSGSNVRATYNLYNAPQINWDLNAVSAFCATWDANQPLEWRSQYGWTAFCGPVGPH 81

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           GQDSCG CLLVTN +TG Q+TVRIVDQCSNGGLDLDVGVFQSLDT+GNGNANGFLTVNYD
Sbjct: 82  GQDSCGQCLLVTNTETGAQQTVRIVDQCSNGGLDLDVGVFQSLDTNGNGNANGFLTVNYD 141

Query: 121 FVNC 124
           FVNC
Sbjct: 142 FVNC 145

[Close]
BLAST of IVF0001109 vs. NCBI nr
Match: XP_023545388.1 (pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241 bits (616), Expect = 4.06e-80
Identity = 108/124 (87.10%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 60
           +SKAQS SNVRATFN YNAP+INWDLNAVSAFCSTWDA++PLEWRSQYGWTAFCGP+GP 
Sbjct: 12  LSKAQSASNVRATFNFYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 71

Query: 61  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 120
           G+DSCGLCLLVTN +T  Q+TVRIVDQC+NGGLDLDVGVFQSLDTDGNGNANGFLT+NYD
Sbjct: 72  GEDSCGLCLLVTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYD 131

Query: 121 FVNC 124
           FVNC
Sbjct: 132 FVNC 135

[Close]
BLAST of IVF0001109 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 178.3 bits (451), Expect = 3.7e-45
Identity = 80/120 (66.67%), Postives = 91/120 (75.83%), Query Frame = 0 

Query: 5   QSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDS 64
           +S SNVRAT++ YN  Q NWDL AVSA+CSTWDA+KP  WRS+YGWTAFCGP GP GQ S
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 65  CGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC 124
           CG CL V N +T    TVRIVDQCSNGGLDLDV +F  +DTDG G   G L V+Y FV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:
BLAST of IVF0001109 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P097611.7e-5072.27Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1[more]
P097622.9e-5072.27Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1[more]
P290626.4e-5071.77Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P290633.2e-4970.97Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P028771.7e-4770.59Pro-hevein OS=Hevea brasiliensis OX=3981 GN=HEV1 PE=1 SV=2[more]
BLAST of IVF0001109 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D4F51.1e-68100.00Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A0A0LG741.1e-6393.55Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010340 PE=4... [more]
A0A6J1CMK04.0e-6389.52pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1KG472.9e-6187.90pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114935... [more]
A0A6J1G2Y52.9e-6187.90pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
BLAST of IVF0001109 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0063600.11.86e-89100.00pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18427.1 pa... [more]
KAE8651558.14.81e-8393.55hypothetical protein Csa_019464 [Cucumis sativus][more]
XP_004139240.16.72e-8393.55pathogenesis-related protein PR-4 [Cucumis sativus][more]
XP_022143020.14.16e-8289.52pathogenesis-related protein PR-4-like [Momordica charantia][more]
XP_023545388.14.06e-8087.10pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo][more]
BLAST of IVF0001109 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G04720.13.7e-4566.67pathogenesis-related 4 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001153Barwin domainPRINTSPR00602BARWINcoord: 59..77
score: 65.26
coord: 40..58
score: 80.35
coord: 78..96
score: 84.56
coord: 99..123
score: 57.33
IPR001153Barwin domainPFAMPF00967Barwincoord: 7..124
e-value: 1.9E-51
score: 173.0
IPR001153Barwin domainPROSITEPS51174BARWIN_3coord: 5..124
score: 74.441399
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 5..124
e-value: 1.0E-51
score: 175.8
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 6..124
IPR044301Pathogenesis-related protein-4PANTHERPTHR46351WOUND-INDUCED PROTEIN WIN2coord: 5..124
NoneNo IPR availablePANTHERPTHR46351:SF3WOUND-INDUCED PROTEIN WIN2coord: 5..124
IPR018226Barwin, conserved sitePROSITEPS00772BARWIN_2coord: 117..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001109.2IVF0001109.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0006952 defense response
molecular_function GO:0004540 ribonuclease activity