IVF0001103 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGTGGTGTTGTTTGTTGTGTGCATCCCTCTTCCGCTTGTGGATGAGAAAAAGAAAGTCATTGGAGATGTTGACAAGGATCGAAGGTATGTGACTTGACCATGAGATACGTGAACTTGAAGTAAGGACATGCATCGTTCTGAGCTTTGTAAGAGATCAAGAAATCTTCGAAAATCGTTTAGAGCTTTGATAGACATAGGGTATGTGACTTCCATCAACGCTCGGTGCAATTCATAACATTTGTATACTTCTACCCTTTTTTGAAGTGTATTTTTGTGTGTACGCTCTCAAGGAAGCTTTTGAAGTTTTTTGCAATAAGGGTGTTGCTAGAAGTTCTAGTATAGAATTTCTTGTTACCTTTTGTGATAACATCCTTAAGAAAAGTGAGAGAGAGAAGTTGAGTGATAAAAAAATCAAGGAGACACTTGAGAAGGTAATTTTTCTATTTATTAATCATTTGAAGTTCATTTAGTGTTGTAACTTTGGATTTCATATGATTTAAAAATACAGGTTGTGAAGTTGTTAGCATACAGACAAAGATCTATTTGCTGAATTCTATAGGTGA ATGAATGTGGTGTTGTTTGTTGTGTGCATCCCTCTTCCGCTTGTGGATGAGAAAAAGAAAGTCATTGGAGATGTTGACAAGGATCGAAGGTATGAAGCTTTTGAAGTTTTTTGCAATAAGGGTGTTGCTAGAAGTTCTAGTATAGAATTTCTTGTTACCTTTTGTGATAACATCCTTAAGAAAAGTGAGAGAGAGAAGTTGAGTGATAAAAAAATCAAGGAGACACTTGAGAAGCATACAGACAAAGATCTATTTGCTGAATTCTATAGGTGA ATGAATGTGGTGTTGTTTGTTGTGTGCATCCCTCTTCCGCTTGTGGATGAGAAAAAGAAAGTCATTGGAGATGTTGACAAGGATCGAAGGTATGAAGCTTTTGAAGTTTTTTGCAATAAGGGTGTTGCTAGAAGTTCTAGTATAGAATTTCTTGTTACCTTTTGTGATAACATCCTTAAGAAAAGTGAGAGAGAGAAGTTGAGTGATAAAAAAATCAAGGAGACACTTGAGAAGCATACAGACAAAGATCTATTTGCTGAATTCTATAGGTGA MNVVLFVVCIPLPLVDEKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKHTDKDLFAEFYR Homology
BLAST of IVF0001103 vs. ExPASy Swiss-Prot
Match: Q5ZC88 (Cullin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CUL1 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.2e-15 Identity = 45/66 (68.18%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of IVF0001103 vs. ExPASy Swiss-Prot
Match: Q94AH6 (Cullin-1 OS=Arabidopsis thaliana OX=3702 GN=CUL1 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.1e-14 Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of IVF0001103 vs. ExPASy Swiss-Prot
Match: P0CH31 (Putative cullin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g43140 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.2e-11 Identity = 41/67 (61.19%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of IVF0001103 vs. ExPASy Swiss-Prot
Match: Q9SRZ0 (Cullin-2 OS=Arabidopsis thaliana OX=3702 GN=CUL2 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.0e-09 Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of IVF0001103 vs. ExPASy TrEMBL
Match: A0A172MAB9 (Cullin 1 OS=Vitis pseudoreticulata OX=231512 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 5.6e-14 Identity = 48/66 (72.73%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of IVF0001103 vs. ExPASy TrEMBL
Match: A0A1S6YFU7 (Cullin 1 OS=Apostasia odorata OX=280455 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13 Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of IVF0001103 vs. ExPASy TrEMBL
Match: A0A2I0B578 (Cullin-1 OS=Apostasia shenzhenica OX=1088818 GN=CUL1 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13 Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of IVF0001103 vs. ExPASy TrEMBL
Match: A0A6J1KEU4 (cullin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111494366 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13 Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of IVF0001103 vs. ExPASy TrEMBL
Match: A0A1U7WKX4 (cullin-1 isoform X1 OS=Nicotiana sylvestris OX=4096 GN=LOC104229650 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13 Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of IVF0001103 vs. NCBI nr
Match: GAU10667.1 (hypothetical protein TSUD_426200, partial [Trifolium subterraneum]) HSP 1 Score: 80.9 bits (198), Expect = 8.15e-18 Identity = 45/66 (68.18%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of IVF0001103 vs. NCBI nr
Match: QHO02016.1 (Cullin [Arachis hypogaea]) HSP 1 Score: 84.0 bits (206), Expect = 4.09e-17 Identity = 52/80 (65.00%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of IVF0001103 vs. NCBI nr
Match: KAG8483254.1 (hypothetical protein CXB51_022272 [Gossypium anomalum]) HSP 1 Score: 84.7 bits (208), Expect = 8.63e-17 Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of IVF0001103 vs. NCBI nr
Match: KAF5930280.1 (hypothetical protein HYC85_031153 [Camellia sinensis]) HSP 1 Score: 80.9 bits (198), Expect = 1.41e-16 Identity = 46/66 (69.70%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of IVF0001103 vs. NCBI nr
Match: ANC90259.1 (cullin 1 [Vitis pseudoreticulata]) HSP 1 Score: 84.0 bits (206), Expect = 1.89e-16 Identity = 48/66 (72.73%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of IVF0001103 vs. TAIR 10
Match: AT4G02570.1 (cullin 1 ) HSP 1 Score: 80.5 bits (197), Expect = 7.7e-16 Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of IVF0001103 vs. TAIR 10
Match: AT4G02570.2 (cullin 1 ) HSP 1 Score: 80.5 bits (197), Expect = 7.7e-16 Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of IVF0001103 vs. TAIR 10
Match: AT4G02570.3 (cullin 1 ) HSP 1 Score: 80.5 bits (197), Expect = 7.7e-16 Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of IVF0001103 vs. TAIR 10
Match: AT4G02570.4 (cullin 1 ) HSP 1 Score: 80.5 bits (197), Expect = 7.7e-16 Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of IVF0001103 vs. TAIR 10
Match: AT1G43140.1 (Cullin family protein ) HSP 1 Score: 68.9 bits (167), Expect = 2.3e-12 Identity = 41/67 (61.19%), Postives = 47/67 (70.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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