IVF0000983 (gene) Melon (IVF77) v1

Overview
NameIVF0000983
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMajor pollen allergen Ole e 6-like
Locationchr07: 21348416 .. 21349318 (-)
RNA-Seq ExpressionIVF0000983
SyntenyIVF0000983
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGAAGATATGTTTTTTTTTTTTTAATCAAGACGATAAATAGTTTTTTTTTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTGTTATGGAAATTAGTGAGTTTTAGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGACGCTAGAATTTGAAGGGATATGACACAATTGAAATTTTAGAATGAAAACTCATGTCAAAATTTAACGAAAATTTAGTTGTTTATTTCTCCCAACTTATTGATCGTTTTCTTTTTATTTGTGTGTTAACTTCGATTTTTTATTCGTCTGTTTTGCAGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTCTCTTTCGTTTTTGTCATCCAATTGGTTGCTTCTTTATACAAAGGTTTTATGTTATGTATCGTTGTGGTCTTTTTCATCATTATTTTCAACAACGGATCAATAAAAGTCATCTAACTTTGTGTTTGTTCACATA

mRNA sequence

GGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTCTCTTTCGTTTTTGTCATCCAATTGGTTGCTTCTTTATACAAAGGTTTTATGTTATGTATCGTTGTGGTCTTTTTCATCATTATTTTCAACAACGGATCAATAAAAGTCATCTAACTTTGTGTTTGTTCACATA

Coding sequence (CDS)

ATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGA

Protein sequence

MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETCEKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Homology
BLAST of IVF0000983 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.3e-44
Identity = 95/99 (95.96%), Postives = 98/99 (98.99%), Query Frame = 0

Query: 1   MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
           MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1   MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61  EKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 100
            KACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61  AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

BLAST of IVF0000983 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEVV 89
          EKACIAKD ANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

BLAST of IVF0000983 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-04
Identity = 39/96 (40.62%), Postives = 51/96 (53.12%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    VF MCI VVV +LQF  A+   E D   +  +K           ++KSC ETC
Sbjct: 1  MAKKMMAVFLMCI-VVVATLQFVMAN---EEDGVTKYEAKF--------DAKYKSCYETC 60

Query: 61 EKACIAKDSANTS-CHSTCDKDCMKKEVVDKISDKL 96
          EK C+  D+   S C   CD+DC +KE  DK+  +L
Sbjct: 61 EKECLRNDTNGESFCEVKCDEDCSEKEAADKLHIEL 84

BLAST of IVF0000983 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.6e-04
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MA     +F MCI VVV +LQF+ A+       E +  +K            +KSC ETC
Sbjct: 1  MANKMIALFLMCI-VVVAALQFANANKEDVAKYEAKFDAK------------YKSCFETC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKL 96
          EK C+   S  + C   CD+DC +KE  DK+  +L
Sbjct: 61 EKECLRYGSGQSYCEVKCDEDCDEKEAADKLHIEL 82

BLAST of IVF0000983 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (476), Expect = 1.02e-59
Identity = 95/99 (95.96%), Postives = 98/99 (98.99%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99
           KACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

BLAST of IVF0000983 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 169 bits (427), Expect = 2.61e-52
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEVV 88
          EKACIAKD ANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

BLAST of IVF0000983 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 3.82e-15
Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 3   KTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQ-SEISSVMPQFKSCVETCE 62
           K   VVFFMCIVV+ GSLQFS+A  TA    +++   K+   +E   + PQ +SCV TC 
Sbjct: 20  KNIMVVFFMCIVVM-GSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCR 79

Query: 63  KACIAKDSANTSCHSTCDKDCMKKEV 87
           K C AK +AN SCH  C+ DC +K +
Sbjct: 80  KECDAKGNANASCHQKCNNDCTEKTI 104

BLAST of IVF0000983 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.3 bits (168), Expect = 5.72e-13
Identity = 43/95 (45.26%), Postives = 55/95 (57.89%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V+VV +LQFS    TA++ TE+E + K   S+  +V  +FKSC  TC
Sbjct: 1  MAKKMMAVVLMC-VLVVSALQFS----TADKSTEMEAKFKSFFSDFGTVEAKFKSCAATC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKL 95
          +K C      N SC S CD DC KKEV +K   K+
Sbjct: 61 QKKC-----TNASCRSKCDADCGKKEVENKFKIKI 85

BLAST of IVF0000983 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.9 bits (167), Expect = 8.97e-13
Identity = 42/95 (44.21%), Postives = 54/95 (56.84%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V++V +LQFS AD  AE    +E R K    ++S V  + KSC  TC
Sbjct: 1  MAKKMMAVLLMC-VLLVSALQFSTADSPAE----MEARFKSFFGDLSGVEAKLKSCAATC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKL 95
          EK C+AK   + SC   C+ DC KKEV +K +  L
Sbjct: 61 EKECVAKGETSESCKPKCNTDCGKKEVSEKFNIHL 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T3F93.3e-4495.96Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A5A7SXV71.2e-3897.73Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A0A0K9Z91.2e-0440.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1[more]
A0A0A0KPA72.6e-0436.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0036015.11.02e-5995.96major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
KAA0035393.12.61e-5297.73major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
KAE8637567.13.82e-1547.67hypothetical protein CSA_017844, partial [Cucumis sativus][more]
KAG6595593.15.72e-1345.26hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595587.18.97e-1344.21hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 51..95
e-value: 9.5E-11
score: 43.1
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 52..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0000983.1IVF0000983.1mRNA