IVF0000947 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTGTCTTAGCAGAATACTACAACACCTAGAGCAGCAAAGAAACAAGATCAAAGGTATTGATATAAATGGTTTCAATCTAACTCATCTTCTCTTTACAAGTGACATCTTGCTTTTCGTTGAGGACAATGATGAATATATCATAAATCTCCAATTTTCTATTCATCTCTTTGAATTTGTTTCTGGTTTGAACATCAATCGGGTTAAACCTACCATCTCCCCAATTAATATCAGCAAAGAGAGAGTTGATTTGGTAGCCGATAGTTGA ATGGATTGTCTTAGCAGAATACTACAACACCTAGAGCATGACATCTTGCTTTTCGTTGAGGACAATGATGAATATATCATAAATCTCCAATTTTCTATTCATCTCTTTGAATTTGTTTCTGGTTTGAACATCAATCGGGTTAAACCTACCATCTCCCCAATTAATATCAGCAAAGAGAGAGTTGATTTGGTAGCCGATAGTTGA ATGGATTGTCTTAGCAGAATACTACAACACCTAGAGCATGACATCTTGCTTTTCGTTGAGGACAATGATGAATATATCATAAATCTCCAATTTTCTATTCATCTCTTTGAATTTGTTTCTGGTTTGAACATCAATCGGGTTAAACCTACCATCTCCCCAATTAATATCAGCAAAGAGAGAGTTGATTTGGTAGCCGATAGTTGA MDCLSRILQHLEHDILLFVEDNDEYIINLQFSIHLFEFVSGLNINRVKPTISPINISKERVDLVADS Homology
BLAST of IVF0000947 vs. ExPASy TrEMBL
Match: A0A5A7TQ88 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00990 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.6e-10 Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of IVF0000947 vs. ExPASy TrEMBL
Match: A0A5A7SVC7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00530 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.3e-09 Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of IVF0000947 vs. ExPASy TrEMBL
Match: A0A5D3BF46 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00500 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.0e-09 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of IVF0000947 vs. ExPASy TrEMBL
Match: A0A5D3E3T6 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold267G00010 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.2e-08 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of IVF0000947 vs. ExPASy TrEMBL
Match: A0A5A7SXB2 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00260 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = 0
BLAST of IVF0000947 vs. NCBI nr
Match: KAA0045522.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK02111.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 1.23e-14 Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of IVF0000947 vs. NCBI nr
Match: TYJ97747.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 1.37e-12 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of IVF0000947 vs. NCBI nr
Match: KAA0048634.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK10835.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 63.5 bits (153), Expect = 9.19e-11 Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of IVF0000947 vs. NCBI nr
Match: KAA0033401.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 9.94e-11 Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of IVF0000947 vs. NCBI nr
Match: TYK07347.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 3.02e-10 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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