IVF0000913 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGCTATTCCCGACGCACAAAAATATCGGGAATAGTGGAAAATACGTTGAGAACACAATTTTCGACGTAAAATCGTGCATCGGGAAGACCGTCGGAAGAAACACATCGAAAGACCTTTTCCCGATGCGTCACCAACAAGGAGTCAGGAATACCCTTCTCCCGTCGTCATCTTTTCTGACGTTGTTGATGCGTCAGGAATAA ATGGGGCTATTCCCGACGCACAAAAATATCGGGAATAGTGGAAAATACGTTGAGAACACAATTTTCGACGTAAAATCGTGCATCGGGAAGACCGTCGGAAGAAACACATCGAAAGACCTTTTCCCGATGCGTCACCAACAAGGAGTCAGGAATACCCTTCTCCCGTCGTCATCTTTTCTGACGTTGTTGATGCGTCAGGAATAA ATGGGGCTATTCCCGACGCACAAAAATATCGGGAATAGTGGAAAATACGTTGAGAACACAATTTTCGACGTAAAATCGTGCATCGGGAAGACCGTCGGAAGAAACACATCGAAAGACCTTTTCCCGATGCGTCACCAACAAGGAGTCAGGAATACCCTTCTCCCGTCGTCATCTTTTCTGACGTTGTTGATGCGTCAGGAATAA MGLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNTLLPSSSFLTLLMRQE Homology
BLAST of IVF0000913 vs. ExPASy TrEMBL
Match: A0A5A7TBZ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1441G00370 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.9e-07 Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of IVF0000913 vs. ExPASy TrEMBL
Match: A0A5A7T7S7 (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2967G00080 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.4e-06 Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of IVF0000913 vs. ExPASy TrEMBL
Match: A0A5A7TPM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001190 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.3e-04 Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0
BLAST of IVF0000913 vs. ExPASy TrEMBL
Match: A0A5A7SP10 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00270 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.7e-04 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of IVF0000913 vs. ExPASy TrEMBL
Match: A0A5A7SVV0 (Transcription factor HBP-1b(C38)-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00200 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.3e-04 Identity = 23/48 (47.92%), Postives = 32/48 (66.67%), Query Frame = 0
BLAST of IVF0000913 vs. NCBI nr
Match: KAA0039107.1 (hypothetical protein E6C27_scaffold84G002100 [Cucumis melo var. makuwa] >TYK25976.1 hypothetical protein E5676_scaffold1441G00370 [Cucumis melo var. makuwa]) HSP 1 Score: 62.0 bits (149), Expect = 1.56e-10 Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of IVF0000913 vs. NCBI nr
Match: KAA0038928.1 (retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]) HSP 1 Score: 58.9 bits (141), Expect = 3.40e-08 Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of IVF0000913 vs. NCBI nr
Match: KAA0032063.1 (hypothetical protein E6C27_scaffold223G00270 [Cucumis melo var. makuwa]) HSP 1 Score: 53.5 bits (127), Expect = 4.96e-07 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of IVF0000913 vs. NCBI nr
Match: KAA0037655.1 (hypothetical protein E6C27_scaffold277G003180 [Cucumis melo var. makuwa] >TYK22800.1 hypothetical protein E5676_scaffold311G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 51.6 bits (122), Expect = 1.56e-06 Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0
BLAST of IVF0000913 vs. NCBI nr
Match: KAA0045130.1 (hypothetical protein E6C27_scaffold30G001290 [Cucumis melo var. makuwa] >TYK23607.1 hypothetical protein E5676_scaffold500G001190 [Cucumis melo var. makuwa]) HSP 1 Score: 54.3 bits (129), Expect = 1.59e-06 Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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