IVF0000910 (gene) Melon (IVF77) v1

Overview


Name	IVF0000910
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	zinc finger Ran-binding domain-containing protein 2-like
Location	chr05: 25663544 .. 25664840 (+)
RNA-Seq Expression	IVF0000910
Synteny	IVF0000910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAAACTTACACACACACACCAAATCAACAAACAACTCTACGGTTTTTTAGTTTCCATCATAAACACACAACACTTGCTCATCAAGGTAAGGTAAGATCATGATGTGTTTGCTTCATTAAATTAAATTTTACTCAATATTATTAATATAATGAATATGATTGTACTATTAAATGTTTAATTATTGTTTTTTTTTCTTTTATATATATATATATAGCTAGAGATCAGAGATATGAATATGAATTGGTCAGGAGGAGATTGGATGTGTGGTGTTTGTGAACATGTAAACTTCAAGAAAAGAGAAGCTTGTCAAAGATGTGGATATCCAAAATATGGAGGTCCTGACCCATCAACATATGATCAATACAATATCATTCATTCTAAAAGCACAGATGAAGTTTTGGCTGGTGATTGGTATTGCAATTGTGGAGCTCATAACTATGCTAGTAGATCATCTTGTTATAGATGTAATAGTAATGCTTATAAAAGTCTTGATATCGGTGCTTTGCCTGGTTGGAAATCTGGAGATTGGATCTGCTCTAGGTATCTATATCTACACACTCTTACTCTTTCGCTTCCGACCACGTACTACCTTTCAATTATGTTTTTCGACTTTCATCGTCTTTCAACTTTCACTGTTCTAGACATGATTGTTTTTAGCCGTTGAGAGAGATCTACATTAGGTATATATGTATGTATATATCTACTCTCTCTCTAACGGTTGTTAAGTCATCAAGAGATCTAGACATTATTATTCAAACACCATTTTTTAAAGACGTTGGAGATGTACTTTAATCCCGATGACGGTTTCATTGGCATCAAACTAAGTTTTAGATACGAAAAATAATGTAGTATTTTTCGACGCATGTTTTGTATAATTTAACTCAAATGTTAATTTGAAATGGGAATATGTTGAAATTTGGTGCAGAATAGGATGTGAAACCCACAATTACGCCAGTAGAATGGAATGTTACAAATGCAAAGCTCCAAGGGATTTTGGTAAGAACATCAAATTTTCTCCACCCTTTTTTTAGACTTTTGACATATGGATCAAATGCATATTAATTTAACTGGTTAGTCGAGACATACGTATATGGATATATCGAAATAAATATATTTCAAACTCATTGCAATATCTCAATGCTAAATATATATACATATATTTTCACAAATATAATAAAATTGTGTAGATTTCTAACTAACTAATTGAGCTATGTTCGAGTAGTAAAACAAATCGTATTTTTTTTTCCTTTTTTCAGGAGGAGCTGTTTGAAAATTATGGAAGAAGCTGATTGGG

mRNA sequence

ATTCAAACTTACACACACACACCAAATCAACAAACAACTCTACGGTTTTTTAGTTTCCATCATAAACACACAACACTTGCTCATCAAGGTAAGCTAGAGATCAGAGATATGAATATGAATTGGTCAGGAGGAGATTGGATGTGTGGTGTTTGTGAACATGTAAACTTCAAGAAAAGAGAAGCTTGTCAAAGATGTGGATATCCAAAATATGGAGGTCCTGACCCATCAACATATGATCAATACAATATCATTCATTCTAAAAGCACAGATGAAGTTTTGGCTGGTGATTGGTATTGCAATTGTGGAGCTCATAACTATGCTAGTAGATCATCTTGTTATAGATGTAATAGTAATGCTTATAAAAGTCTTGATATCGGTGCTTTGCCTGGTTGGAAATCTGGAGATTGGATCTGCTCTAGAATAGGATGTGAAACCCACAATTACGCCAGTAGAATGGAATGTTACAAATGCAAAGCTCCAAGGGATTTTGGAGGAGCTGTTTGAAAATTATGGAAGAAGCTGATTGGG

Coding sequence (CDS)

ATGAATATGAATTGGTCAGGAGGAGATTGGATGTGTGGTGTTTGTGAACATGTAAACTTCAAGAAAAGAGAAGCTTGTCAAAGATGTGGATATCCAAAATATGGAGGTCCTGACCCATCAACATATGATCAATACAATATCATTCATTCTAAAAGCACAGATGAAGTTTTGGCTGGTGATTGGTATTGCAATTGTGGAGCTCATAACTATGCTAGTAGATCATCTTGTTATAGATGTAATAGTAATGCTTATAAAAGTCTTGATATCGGTGCTTTGCCTGGTTGGAAATCTGGAGATTGGATCTGCTCTAGAATAGGATGTGAAACCCACAATTACGCCAGTAGAATGGAATGTTACAAATGCAAAGCTCCAAGGGATTTTGGAGGAGCTGTTTGA

Protein sequence

MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGAV

Homology

[Close]

BLAST of IVF0000910 vs. ExPASy Swiss-Prot
Match: Q5ZLX5 (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 35/98 (35.71%), Postives = 44/98 (44.90%), Query Frame = 0


Query: 2  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPDPSTYDQYNIIHSK 61
          N   S GDW+C    C +VNF +R +C RCG          K GG +         +  K
Sbjct: 5  NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIG-----KTLAEK 64

Query: 62 STDEVLAGDWYC-NCGAHNYASRSSCYRCNSNAYKSLD 89
          S     A DW C  CG  N+A RS C  CN+  Y  L+
Sbjct: 65 SRGLFSANDWQCKTCGNVNWARRSECNMCNTPKYAKLE 97

[Close]

BLAST of IVF0000910 vs. ExPASy Swiss-Prot
Match: O95218 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 34/98 (34.69%), Postives = 43/98 (43.88%), Query Frame = 0


Query: 2  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPDPSTYDQYNIIHSK 61
          N   S GDW+C    C +VNF +R +C RCG          K GG +         +  K
Sbjct: 5  NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIG-----KTLAEK 64

Query: 62 STDEVLAGDWYC-NCGAHNYASRSSCYRCNSNAYKSLD 89
          S     A DW C  C   N+A RS C  CN+  Y  L+
Sbjct: 65 SRGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLE 97

[Close]

BLAST of IVF0000910 vs. ExPASy Swiss-Prot
Match: Q9R020 (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 34/98 (34.69%), Postives = 43/98 (43.88%), Query Frame = 0


Query: 2  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPDPSTYDQYNIIHSK 61
          N   S GDW+C    C +VNF +R +C RCG          K GG +         +  K
Sbjct: 5  NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIG-----KTLAEK 64

Query: 62 STDEVLAGDWYC-NCGAHNYASRSSCYRCNSNAYKSLD 89
          S     A DW C  C   N+A RS C  CN+  Y  L+
Sbjct: 65 SRGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLE 97

[Close]

BLAST of IVF0000910 vs. ExPASy Swiss-Prot
Match: Q19QU3 (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 34/98 (34.69%), Postives = 43/98 (43.88%), Query Frame = 0


Query: 2  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPDPSTYDQYNIIHSK 61
          N   S GDW+C    C +VNF +R +C RCG          K GG +         +  K
Sbjct: 5  NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIG-----KTLAEK 64

Query: 62 STDEVLAGDWYC-NCGAHNYASRSSCYRCNSNAYKSLD 89
          S     A DW C  C   N+A RS C  CN+  Y  L+
Sbjct: 65 SRGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLE 97

[Close]

BLAST of IVF0000910 vs. ExPASy Swiss-Prot
Match: Q5R580 (Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 34/98 (34.69%), Postives = 43/98 (43.88%), Query Frame = 0


Query: 2  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPDPSTYDQYNIIHSK 61
          N   S GDW+C    C +VNF +R +C RCG          K GG +         +  K
Sbjct: 5  NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIG-----KTLAEK 64

Query: 62 STDEVLAGDWYC-NCGAHNYASRSSCYRCNSNAYKSLD 89
          S     A DW C  C   N+A RS C  CN+  Y  L+
Sbjct: 65 SRGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLE 97

[Close]

BLAST of IVF0000910 vs. ExPASy TrEMBL
Match: A0A1S3C6B6 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103497392 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 3.2e-79
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120
           WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKAPRDFGGAV 132
           CK PRDFGGAV
Sbjct: 121 CKTPRDFGGAV 131

[Close]

BLAST of IVF0000910 vs. ExPASy TrEMBL
Match: A0A0A0LIX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.5e-76
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120
           WYCNCGAHNYASRSSCY+CNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKAPRDFG 129
           CKAPR FG
Sbjct: 121 CKAPRHFG 128

[Close]

BLAST of IVF0000910 vs. ExPASy TrEMBL
Match: A0A5D3BFH7 (Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00090 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.8e-72
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 11  MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 70
           MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY
Sbjct: 1   MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 60

Query: 71  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGA 130
           ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGA
Sbjct: 61  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGA 120

Query: 131 V 132
           V
Sbjct: 121 V 121

[Close]

BLAST of IVF0000910 vs. ExPASy TrEMBL
Match: A0A5A7V2V3 (Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001550 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.1e-71
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 11  MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 70
           MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY
Sbjct: 1   MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 60

Query: 71  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGA 130
           ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCK PRDFGGA
Sbjct: 61  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKTPRDFGGA 120

Query: 131 V 132
           V
Sbjct: 121 V 121

[Close]

BLAST of IVF0000910 vs. ExPASy TrEMBL
Match: A0A6J1HSH3 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465727 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.7e-65
Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY+        +  EVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE-------FNKTEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120
           WYC+CGAHNYASRSSCYRC  NAYKS DIGALPGWKSGDWIC+RIGCETHNYASRMECYK
Sbjct: 61  WYCHCGAHNYASRSSCYRC--NAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYK 120

Query: 121 CKAPRDFGGAV 132
           CK PRDFGGAV
Sbjct: 121 CKTPRDFGGAV 122

[Close]

BLAST of IVF0000910 vs. NCBI nr
Match: XP_008457786.1 (PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo] >XP_008457794.1 PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo])

HSP 1 Score: 304 bits (778), Expect = 9.14e-105
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120
           WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKAPRDFGGAV 131
           CK PRDFGGAV
Sbjct: 121 CKTPRDFGGAV 131

[Close]

BLAST of IVF0000910 vs. NCBI nr
Match: XP_004139322.1 (zinc finger Ran-binding domain-containing protein 2 [Cucumis sativus] >XP_031736555.1 zinc finger Ran-binding domain-containing protein 2 [Cucumis sativus] >KAE8651526.1 hypothetical protein Csa_019441 [Cucumis sativus])

HSP 1 Score: 300 bits (769), Expect = 2.16e-103
Identity = 128/131 (97.71%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120
           WYCNCGAHNYASRSSCY+CNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKAPRDFGGAV 131
           CKAPR FGGAV
Sbjct: 121 CKAPRHFGGAV 131

[Close]

BLAST of IVF0000910 vs. NCBI nr
Match: TYJ97799.1 (putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (716), Expect = 1.88e-95
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 11  MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 70
           MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY
Sbjct: 1   MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 60

Query: 71  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGA 130
           ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGA
Sbjct: 61  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGA 120

[Close]

BLAST of IVF0000910 vs. NCBI nr
Match: KAA0061590.1 (putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa])

HSP 1 Score: 278 bits (712), Expect = 7.68e-95
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 11  MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 70
           MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY
Sbjct: 1   MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 60

Query: 71  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGA 130
           ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCK PRDFGGA
Sbjct: 61  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKTPRDFGGA 120

[Close]

BLAST of IVF0000910 vs. NCBI nr
Match: XP_038890693.1 (zinc finger Ran-binding domain-containing protein 2-like [Benincasa hispida])

HSP 1 Score: 275 bits (704), Expect = 1.51e-93
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPS YDQY  IHSK TDEVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSAYDQY--IHSK-TDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120
           WYCNCGAHNYASRS+CYRCN  AYK+LD+GALPGWKSGDWIC+RIGCETHNYASRMECYK
Sbjct: 61  WYCNCGAHNYASRSTCYRCN--AYKTLDVGALPGWKSGDWICTRIGCETHNYASRMECYK 120

Query: 121 CKAPRDFGGAV 131
           CKAPRDFGGAV
Sbjct: 121 CKAPRDFGGAV 126

[Close]

BLAST of IVF0000910 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 9.4e-47
Identity = 81/144 (56.25%), Postives = 97/144 (67.36%), Query Frame = 0


Query: 3   MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWY 62
           M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D STY  YN        EV+AGDWY
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTY-LYN------RTEVMAGDWY 60

Query: 63  C---NCGAHNYASRSSCYRC--------------NSNAYKSLDIGALPGWKSGDWICSRI 122
           C   NCG+HNYASR+SCYRC                 AY +      PGWK+GDW+C R+
Sbjct: 61  CGALNCGSHNYASRTSCYRCGMIKVEYTEQYYGAQMVAYGNDGAACPPGWKTGDWVCPRV 120

Query: 123 GCETHNYASRMECYKCKAPRDFGG 130
           GC  HNYASR EC+KCK  RD+GG
Sbjct: 121 GCGVHNYASRAECFKCKTTRDYGG 137

[Close]

BLAST of IVF0000910 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.1e-30
Identity = 64/154 (41.56%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNI-------IHSKSTDEVLAGD 67
           GDW C  C H+NF++R++CQRCG  + G       D  N            +  +V  GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 68  WYC---NCGAHNYASRSSCYRCNS----------------NAYKSLDI--------GALP 127
           WYC   NCG HN+ASRS+C++C +                 A    DI        G   
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

[Close]

BLAST of IVF0000910 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 7.4e-28
Identity = 56/159 (35.22%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQY------NIIHSKSTDEVLAGDW 67
           GDW C +C H+NF++R++CQRC  P+ GG        +      +     +  +V  GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 68  YCN---CGAHNYASRSSCYRCN-------------SNAYKSLDIGALPG----------- 127
           YCN   CG HN+A+RSSC++C              +  +  +++G   G           
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

[Close]

BLAST of IVF0000910 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 55/209 (26.32%), Postives = 76/209 (36.36%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPSTYDQYN- 67
           GDW+C  C + N+  RE C++CG  K                    Y    P ++DQ   
Sbjct: 50  GDWICTGCTNNNYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGS 109

Query: 68  -IIHSKSTD------EVLAGDWYCNCGAHNYASRSSCYRCN------------------- 127
            +  S +T+      E  +GDW C CG HNY+SR  C +CN                   
Sbjct: 110 LLAFSNATNQASVHKEWRSGDWICRCGFHNYSSRIQCKKCNEIAPLALGTKRLASEALAH 169

The following BLAST results are available for this feature:

BLAST of IVF0000910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZLX5	2.4e-07	35.71	Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=...	[more]
O95218	1.2e-06	34.69	Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z...	[more]
Q9R020	1.2e-06	34.69	Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=...	[more]
Q19QU3	1.2e-06	34.69	Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRA...	[more]
Q5R580	1.2e-06	34.69	Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=Z...	[more]

BLAST of IVF0000910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C6B6	3.2e-79	99.24	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0LIX1	1.5e-76	97.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1	[more]
A0A5D3BFH7	3.8e-72	100.00	Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7V2V3	1.1e-71	99.17	Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1HSH3	7.7e-65	85.50	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=...	[more]

BLAST of IVF0000910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457786.1	9.14e-105	99.24	PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo] >XP_0084...	[more]
XP_004139322.1	2.16e-103	97.71	zinc finger Ran-binding domain-containing protein 2 [Cucumis sativus] >XP_031736...	[more]
TYJ97799.1	1.88e-95	100.00	putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa]	[more]
KAA0061590.1	7.68e-95	99.17	putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa]	[more]
XP_038890693.1	1.51e-93	92.37	zinc finger Ran-binding domain-containing protein 2-like [Benincasa hispida]	[more]

BLAST of IVF0000910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26695.1	9.4e-47	56.25	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	2.1e-30	41.56	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	7.4e-28	35.22	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	1.1e-15	26.32	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 8..32 e-value: 4.3E-6 score: 36.2 coord: 98..124 e-value: 9.8E-6 score: 35.1 coord: 59..82 e-value: 0.002 score: 27.4
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 96..125 e-value: 3.0E-8 score: 32.8 coord: 8..34 e-value: 3.2E-4 score: 20.0
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 100..121
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 10..29
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 96..127 score: 9.64205
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 6..35 score: 8.817719
None	No IPR available	GENE3D	4.10.1060.10		coord: 1..37 e-value: 7.7E-10 score: 39.9 coord: 93..127 e-value: 2.6E-11 score: 44.6 coord: 49..85 e-value: 2.7E-9 score: 38.1
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 2..128
None	No IPR available	PANTHER	PTHR23111:SF41	ZINC FINGER, RANBP2-TYPE-RELATED	coord: 2..128
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 2..36
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 94..127
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 55..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000910.2	IVF0000910.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding