IVF0000878 (gene) Melon (IVF77) v1

Overview


Name	IVF0000878
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DNA repair protein recA-like protein 2
Location	chr08: 27347368 .. 27361306 (-)
RNA-Seq Expression	IVF0000878
Synteny	IVF0000878

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTGACCCAAATAACAAAGTTTCGGGTGAGTTTGTAATGTCAAATCTCCTTTTTCATTTGACCCTTTGAGAGCACCAAGAACAACAATGGAGCTTCCTCTCTGCAAAATTCCTAAGCGCCAAATTTCTTAATCTTAAAACCCTAACCCAAAAACTCTGCCCAATAAGCTCTACGAGGGATGTCATTTCTCGCACATTCACTCTTCCGCTCTTGCCGTCTCAAGCACTTCGAAGCATCTCGCTTTTCCTCTCTGTTCCACTTCCTCGGCCAGGTCTCTTTTCTTTGACCTCTTCGTCTTCTACTTTTACTTCAGATTCTACGTCTTGAATTGATTATCTGTTTTCTTGTTAGAGTTTGAACATTTTTATTTATGAGTTTCGTCCGTAATGTCCTCGGTACTGAAATAACTTAGATGCTGCCACATGTAGAAGGATAGTTGTTTTCTTTTGAATTTAAATAAGGAAAAAATGAAATGAATTGAATATTGTTCATGGATAATGGGGCTTTTGAAAGTAGTATTTTCTCTGTTTTGGCTTACAATTATATTAAGATTGTATAAATGGGTTTTCCCAGTTTTGTTTTTCTTCTGTGACCCTTTCCCTTTTTGTTCTGGAAGGGAAGGAGAGATGTGATCAGCTGTATGGGTATAGATGCTTGTCATTTTTCCTCACTAGGTAATAGGCAACAGGCCAAAAATCTCTTTCTTTGTATTTTGTTAGTTACATAAGAGCTGCCCAATTGACGTTTTCTGTTTATCCTAATGCACCATAATTTTTCTTTATAAAATTTAGTTGATGTTTGGGAGTACGAATGCGATATGCTTAATGATGATACTAAAACGAGAGAGAAAGATACTGCACTGCATTCGGCAATCTCTCGGGTTGCTGCTGATTTTGGAAAGGAATCTAAGTTGTTTTTGCAGAGGTCTTTTAGCTCCCGATATGCACATGTGATTTCCACTGGATCATTAAAGCTAGACATTGCTCTTGGGATTGGAGGTTTACCTAAGGTGAGTGGCTGTAAGTTGGATTTTTTTTCTGCCATTTATTTGATTGTTTATTTCACGTATTTTCCAGAATTGGAATGTGTTTGCAGTTAAAGTCTTTTCTGTTGTTACTTCACTACCTTTTCATTTTACGTCACTCGCATATTCATGGTGTTGATTTCTACATAATAAAGGTCTCTTAGTCTAATGATCTTTTGTTATTTCCATCATATTTTGTTTTGCCGCATGTTATTTGTGTACTATATTTCATTTCTTCACCTTGATTTTGCAAGGGTAGGTTTAAGGCTTGATCATAGTGTGCATATAATAAAGAAATCTTTGGTTAGAACCGATCCTAAATCACTTGACCTTTGTCAACTATGTATAAGGGCAGAGAACCTGATAAGCGCCCACTATGTTTGTTAGATGCAAAGCTAGAGGTCCTTCTAGGATCCTTGCAAAACTCACAAAGAAAGCTAACTTAGATCAAACCTAGAATCTATGGTGGTCACTCTTAGATCCTAAGACAACTCACTCCAGGATTAGCTTGATCAAGACTCATCTAGTGAATTGATTTTTAGATTTGAAAGTTGAATATGCACAAACTTTTTAATATTGACATTCTCTTCCCAAAATGTGGAAACTAGATCCCTATGTATACTAATTAAAAATGCTAAATAAAAGGACATAACATTTAATTTTATGCCCTTTCAACTACTATAATAAATGAAAACACATAACATTGAATAAGTACAATCTAAAACACATAACATTAAATAAGTACATAATTCATTAAAGATGTGAGTGAATTTGAATTCATCATGAATTTTGGGGTCCAAATAACTTTTGAAGTTCCAAATGTTGGAACTCTTCAAGCTTATTGGGAAGCTTAGCTTGAAGGTTACTCGTTCTATGCTTCAGCTAATCAATGCCAATTATTTGCTTATCCCATCTATGTATATCTGAAATTAAAAAAAGGGGACCCCAGTTTAGTGGTTTGTGGTCAAGTTCTTTTATATTCAACTTCTTCCAAAAGACTATGAGCCAAAAGGACATTAGAAGACTTGCATAATCTAATCGAAGTTCATGTAAATTCCATGTATATGACTAATTCACATTCATAATGATTAAAAGAATGTCATGATCAAATTGAATTACGATAGGATTTGTATTAGGGGTAATTACGGTATTAAGGGAATATTAGTAATTAGTTGGAGATTTAGTTATACTGATTGATTATAAATAGAGGGAGTGGGGAATGGAGAGGATATGCAATATAGTGTAAGTGAATTGGGGGCTTGAGAGTAGTCTCAAGATTGGGTGGGTCCAAGTACCTCGAATCACTTGGTTTATCTTGTATTTCTATTATCTTTTATATTACAATATATGGCTTCTTTCATTCATGGAGTTGAAGCAAAGTTGAGAGAATTGTGGGATTGGCTAAATGAGATGGAATTCATATTTTGATTTCAACAAGAGGAAGAAAAGCAGGTGAACAGTGATATGAGAAATATTTTCAAAGAGAGGAGAGAGGTTGCACCAACGAGAAAAGAAGAAATCAAATTCGCGAAGAAGGAAAGCAAAGAATCAAGTGGCTTACCTAACGTAGAAGAAGGGAAGGAAATAGTCGTTCCAGTAGAAACAAGGGAACCAAGCTCTAATTTGAAAAGAAATCAATAAAATGTAATCATCTCAAGGAGCCTTCAAGATATAGAAACTCAAGGACAAAAGGCTGTCAAATTGGAATCATGTTTGACAGAGATGCGAAACTTCAAATGCAACCAGAATCAAGTAAGAGCAACAGATCCAGGCCAAATGAAGCAAGATTGGCCAAGGAAAAATAGGTATGTGAAGAAAAGAAAGTGCAAGAGAAACAAAAGAAGGTTAAACATACCAACAAAAACAAATTAAGATAGTTGGAGGAAGAACTCCTTGAGGTCTAAGAAGCGATGAGGCACATGAAAGAAGAATGGAATGAGAAAGAGGAAAAAGAAATCGAAAAAAACATGGTGGCAGAATAATTTTTGATTATCTAATGCTTGTCAAAACAATTGGGGGATCTAATGAAGAAAAAGAAATTGTCGACGGTTGAGTTGTTGGCCAACAAAGAGGGTGCCAGACAAAGAAGCGATGATCGAAGTACTTTTGTAATCACGCTAGTTGAAGACGGAGGAAGTATGGTGAGGGTGGAGACTCTAGTTATGGTAGTTGAAGTTGTGCTACGGTGGTCGAAACGCTAAATATGGTAGATCACAATGAGCCATGATGGTCGGAGGTGCTGGTAATATCAAAAAATGTTGATTGGCGGTGGTTGGAGAAGCAATTGTGGGGAATGGGTAGATTACGTGAAGCTTAGGGAAAGAGAAATTTGTGTGAAGAGATGTACAAACTAATTGATGCCGGCGTGACATATTTGGGTGTTGGGACCGATTGTTGGAAAATCAAAGGAATAGGGTGTTGGCTGTGGGCTGCAAATTGGGCTGAGTAAAAAGGTGTGTTTTAGGGGCCGATAATGATAGGCTTTGTATTAGGGTATTAAGGGCATATTAGTAATAAGTTGGAGAGTTAGTAATACTGGTTGAATATAAATAGAGAGAGTGGGGAATGGAGAAGATAGGCAATATTGTAGTCAGTGAATTAAGGCCTGAGATTAGTCTTAAGATTGGGAGGGTCCAAGTACCTCGAATCACTTGGTTTATCTTGTATTTCTATTATCTTTTATATTGCAATATATCTGGGTTCTATCAAATTAAATTTTAGGTTTCATTATAAATTGATTCATCGAGGATCAAGAAATGCTCAAGAGCCCTGATGGACATTATCTATCACCTTCAGATTGGGGTTCCTTGGCTCTATCAAAATCGGCTTTGTATCACAGTCTACTAATAAACTGGTAAAAAGAGCAAGAGAACAAAAAAGAAATCCAAAGGAATAGATGAGCTAAAAAGGCTTGTCCGTAGCATCAAATATGAAAAAGACATCATTAAGGAAAACCAGGGTGGGTGATCAAACTCCAAATGATTATTTTCTCTTGGAATGTGCAAGGTTTGAAAGCCGGGGAAAAATGTGCAATGGTGAAAAATGTCATCCTTAAACATAACCCTACTATGGTGATTCCTCAAGAGATCAAGTTAGTGGAGGTTGATTGTTGTATCATTAAATCCCTTTGGAGTTTTAGATTATCAATTGGACGGTCTTGGAAGCATCAGGAACCTTTGGTGGTATCATCATAATGTGGAACATCCCTTCCATTACATTGGGCGAGGTCATTAAGAGCCTTTTTTTCGCTTACTTTTTCTTTCTCTTTAGCAAATAGATTTTCTTTTTGGATCCCAGGTATTTGTGGCCATCCTCTGTAAAAAACAAACATTTGTTTTGGCAAGAGCTTTATGATCTCTAGGGTTTTGTGGTGATCAGATACTAGGTGGAGACTTCAGATGGACATGGGAAAAATCTTCCAACAGACCACCAACCACCAGTATGAAATCTTTCAATTCTTTCATTGAGGCAGCTGATCTCATCGACATCCCATTGCAAAATGACACATACACACGGTCGGGTTATCGTCATTACCATGTATCCACCCTTATTGACTGTTTCTTGATGACAGAACAGGTTCTTCAGAAATTTAGCTTTATCACATCTATAAGATTGGAGAGGCCGACATTTGACCGCTTCCAAATCTTACTTTCAATTTGGCACAACAAATGGGGTCCAACTCCTTTCCGCTTCGAGAATATGTGGCTTAAGCACAAAGACTTTGATAGTATCATTGAGTATTGGTAGAAAAACACAGCAACACAGGCCAATCAGGGCATGCTTTGATCATCGAGCTAAAAGGACCGAAAACTATGCTAAAGAATGGAACAAGATCACTTTTGGCAACATTTATACACAAAAGAATGAACTCATGGCTGAAATTACCTTATTAGACAATTTGGAAGAAATAGATGATTGTCTCCCTATTCACAGTGTCCAAAAAAGGGAGCTAAGGGCGCAATTACAATCTATTGTGGCAGAGAAAGTCCACTAGACACAAAAGTGCAAGGCACTTTGGCTTGAGGAAGGGGATCTAAAATACACTTCTTTCATTGTATTGTGCTACAGGGAAGCGTCTGAATTCCATACATGATTTACTTTCACCTGAGGGGGTTAGTCTTCTGATTGAAAAAGACATTGTTGAAGAATTCTTCAAATTCTACCGAAAACTCTACACCAAGAGGCTAAGCCTTACTGTCCTTCCCATTTTGTCTTGGCCTACTCTATTTGACCAACAATCATGCTCCCTGGAGAGTCCTTTCTCTGAACAAGAGATTTGGAATGCAATTTGTGTGCTTGGTACAAATAGGTCTCTTGGTCTGTATGTGATGCATAATTCTTCAAAAGATATTGCCCGATTATTAAGGAAGACATATTAAGGTTGTTCTAAGACTTCTATCACAATGGTATCGTAAATGAAAATCTCAATGAAGCTTACATTGCCCTCATCCCTAATTGGACAAATGCTAAATGTATTGGTAATTCTAGACCAATAATTCTTATCACAGGTGCCTACGAAATTCTTACCAGGGTTCTGTCTGAGAGGCTTAAGAAAATTCTTACCACAGATGCTAAATGTATTAGTGACTTTGGTCTGTATGGTTTTTGATGCAGAATTCTACAGAAGATCTTGGACGATTATTAAGGATGACACATTAAGTTTGTTCCAAGACTTCTATCACAACGGTATCGTAAATGCTAATCTCAATGAAACTTACATTGTCCTCATCCTGAATTGGACAGATGCTAAATGTATTGGTGACTTTAAACCAATAATTCTTACCACAGATGCCTACAAAGTTCTTGCCAGGGTTCTATCTGAGAGGCTTAAGAAAATTCCTACCACAGATGCTAAATGTATTAGTGACTTTGGTCCGTATGGTTTCAATGCAGAATTTTACAAAAGATCTTGGCCGATTATTAAGGAAGACATTAAGTTTGTTCCAAGACTTCTATCTCTATTGTATCGTAAATGCAAATCTCAATGAAACTTACGTTGCCCTCATCCCTAAGTGGACAGATGCTAAATGTCTTGGTGACTTTAGACCAATAATTCTTACCACAGGTGCCTACAAAATTCTTGCCTACCTGAGAGGCTTAAGAAACTTCTCCCACTTAATTTCTGAACACCAATCTGCTTTTGTTGAGGGGTGTCAAATTCTGGATCCTTTGTTAGCCAATGAAGTTATTGATGAGTGGTCGAGGAAAGGAAAAAGAGGAATTGCCGTCAAGCTTGACATTGAAAAGGCTTTTGACACTGTTAACTGAAGTTTCCTTGACTCTGTTCTTCAAGCCAGAGGCTTTGGGTGTAGATGAAGAAAATGGATTAAGGGTTGTCTGTTGTTTGCAAACTTCTCCATCATTATTAATAGTTGACCAAGAGGTAAAATAAAAGCTTCTCGAGGTATTAGGTAGGTGACCCTCTCTCCCCCTTCCTTTTCAACATTATCATCGACACTCTTAGCCGGCTTTTGAATTGAGCTGAATCCGAAGGAAGTATCCAAGGCTTTGATCTTGGTAAGGATAAATTATCCATCACTCATCTCCAATTTGCTGATGACACCATTGTTTTGTCGAAATAGGACTGCACTCTTATCAGAATTGTTTAAGGTTATTGATAAATTTGAGTCTTGGGTCTTTCCATCAATCATACAAAGTCAGAAATCATTGGTATCAACCTCTTTCCTGCTGACTTGAATTCTGTTGCTGATTGCTTTGATTGCAAAGTTGGTTCATGGCCAAATACTTATGGGCCACTCAAATCACCGGCCTCTTAATACAATAGACAATTGACATTGGAACCTCGAGGTGTCTGGTATCTACATCACAAAATCTTGGATTGCTTTGAGACACGAGGCCTAGGGAAACGTTCTTTTTAAAAAATTGCCTAAAGCCATATGGACTGACCATTATCCCAAAAAAAATCAAAACTCTTATTTGGGAGCTTGCTCACGTAGCCGTTCTAACCAACGACAAGCTTCAGTGCTACCTTCCCACTACTTTATTATCTTTGTATTGGTGTTCTCTATGTAAGAATAACTCAGAATATCAGTCACCTCTTCATTTTCTGCCCCTTTGCTAAAGATTGCTGGGATCACTTTTTGAAAGTTTCAATTGGCACATGGTCTTTCCTATGGATATCACCCTCTTCCTTTCAACCATTTTGAAGGATCACCCTTTCAAAGGAAGAAGAAGCATCATTTGGAAACACATAGCAAGAGCCTTTCTGTGGAAGCTATGGCAAGTGCAACAACATAATTTTCCAAGACAAAATCAATCATTTTGAATCCTTTATTGACCATGTTATTACTGCTATTACTTGGTGCAAACTTTTGGCAATTTTCAAATCTTACAGTTTTGCTACTCTATTAGCTAATTGGAGATATGTCCTGTAACTCCTTTGGTCTGGGGTCTCTTCCCCTTTCTTCAACTCTTTTAATTTCATTTTATTAATGAAATTGTTTCTTATAAAAAAAATGTATTGATTCATTCTATTGAGTAGTTCTCGTAGTGTACTCTATCAAAGTGCATTGTTAGCAAATGCAGATACTATCTGTGTATTTGCTGTATGTATTTCTGTTCGATTTTCTCTACTTGACAGCTTCACTTGAACAAGCTATAGGCTGACTAATTGTGTCCTTAAGTTTGATTTTCTCTTCATTTTAAAGTATTGGTTGTGATCATTCTACTTCCTATGCAGGGAAGAATAATTGAAATTTATGGGCAAGAAGCTTCTGGAAAGACAACATTGGCGCTCCACATCATTAAGGAAGCTCAGAAACTTGGAGGTGTTTGTTGGCTTTGCCTTTTTTCTGGATCAGAATGATAACTACTTGTCGAAAATTCTGGCAAGTTGTATACTTTAAAATACTTTATGAAAGAAAAAATCCATTTGATTTAATATCAACCTCGATTTCTATACCATCTTTTATGTTAAGTTCGTTTATCATTTAATCCAATCTTGATGATTACTACCCTAAAATATTGAAAATACTTATAGGATCATGGATTGTTGTCGACCTCACTTTCAAATTCAAATCTAGCCTCCTGTTACTTATTACTTTTTTATGAAGAAATATGAATGTTGTAATGAAGTATGATAAGGTAGTATTATTTTCAAAAATATAATTTTGGATATGATTTCTCGTTGGCTATGGGTACCTGCCACTTCATATATGTATATGCGTGCTTTTCCAGAATCTACAAATGATATAAACTCATTAAAACTTGCGAGATTCTTCTTTTTTAAAGAGAATGAAAAGAATAACTCATTGAAAAAACAAAGAGAATTCACATGGATACAAAAAGACCAGCCCACAAAAGAAGGGATCTCCCTCTTTAGAAGGGGACTCCAACTGTGCAAAATAATACATATAGAGTAGTTTCGAAAAGCCGTCAAAATCCAAGCTCACAAGGAAACATGAAAACGAACTAGATACCAAACATCATTAGGGCTCCACGCCTTTATAAACTCTACTATCTCTCCATCCCCACAAAACGCACAAAATAGCATACCCCCTTTGCAAACCAAAGAAAGCAATCCTTCTCCCCACCAGATAGGTTGAGAAGAGATTCCACGACATAGCAAAAATGGTTTTGCTGAAAGAAAGAATCCCATTATGTACTGTCAAACTCACAATGCTTAAGAAAATGGACCAGGTCTTTCTCCCGCTTCAAACAGAATTTACAACTGAAAAGACTAGCAAGCAAGGAAAACTTCCTCTTAAGTTGATCCATTGTGTTAGTGTGCCCGTGTTAGACTTTCAAGTAAAGAACTCAGTTTCCTAGGAATTTTAATCCTCCAAAGCACCAAAAACAACCTACAAACCAAGGGAGAAGGATCAACCAAGTCGCTAAGAAAGATTTACACGAGAACCCCCCTAAAGGATCGCGACTCCATATGCTCACTTCCCTTCCCCCATGCTTAAAAGGGAAACCCTCAAATGAAGAAAAAGAGTAGCCACCTCCGTCATTTCCCTAGAGCATGATTGAACCCGAAAGAGAGAATAAGAACACCTGGACCACACAAGAAATTTTTTGAGAGAACAAATGATACAATTGAGGGAGCAAAGAACAAAGTGGTTTTTTCAATAGCAACATTTTGCAATAAAAATAAAGGTTTGCTATCTCCTCTCTCCTCCCCCTTCCTCTTTCACTCCTCTCCCCCTCGGTCTCTCTTCTCCTTCGATCAGTAGCATTCGACAACCTCCTTTTTTCCATTCAAACAGGCCCATAGCCCTCTCAAATTACTTCTCAGCTCATAAAATTAAAACGTGGAGGTTCAGAGTTGCAAGATTAACGACTCCTATTACTGCATTTGGTTTGAAGAGGATAAGTTCTTCCCAATAATTCTTATCTCTTGAGGGACGACCATGCAATTTTCAGTTGTTGTTCTTTGGTATGTCGCTGTTTCTTGCAATGCTCACAGATGAGGACATGTTTTCCGTTGTGCTTCTCACTATCAGGGGTAGAGGACCTTGCGTTGAAGGAATCAATGGCAAAAGTGGTTAGAATATTCATGGCACTCGTAGGATCCTCCTCAAGACAAACTTCAAAATTGACCTCCATCAGGAGGAAATAGGTTTTTGGCCCAGTATACGACCACGGACGACATCCAACTTGGAGTCGAGGCCAACGAGGAAGTCATATATCCGGTCAAGTTCTTCAAGTCTGGAGTGCTGTATTCCATCACTAGGATAATTCCAGACAATTTCTCTGCACATATTCATTTCTTGCCAAATGAGGGGAAGTTTATTCAAGTAAGATGTTACATCCATGCTTGCATTCATGGACTTGCTTTCTCAGTGTGTAGAGGTGAGAGGTATTTTAACGCTTCAAATAAAGCTTCTGAGCTGCATTCCGTATGTTCCTAGCAGTCGTACCATACAATAAAGGCTTGCCAATAAGCTCCGTACCATTGATTAACAAGGCCCAAACCAGAGAATCCTCCCATTTCCAGTAACATTCCTAGGGATCTCCTGGTTGAGGGTGTGGTATCTCTCTCGACAGAAAGCCAAATTTGTGGCGACCCTCAAGGATCATTTTAACAGATTGGTACCACGAGAAATAGTTATGGCCATTCAACTTCTCCCCCATAGAGATTCTTGTAGATTGTGTCATAGAATTAGACACATAAGTAAAGGACAAAGTAGGGAACAATGTTACCGAATTCTCGGAATACATCAGCAAGGTTGTAGGAATGCCAAGACTAGGAGTGGTTGTAGGAGCCCCTAACGTTGCCTCAAACACCGCAATTTGCTGTTGAAGCATATCCAGTTGTTGTTGGGCGGTACCTAGAGAAAAATCCTGCACATGAGGTTTGGATTGGGCAAAGGATTCACCGACCTCAAATGTTAACTGAGCCGGTAAGGTATAGTGTCTTGTTGGGGTTGTGAAGAGCGGTTGGGTTTGAAAGGTGTAGGATTTTGTTTGCGGTGGAATTGGATGGAATTCTAGTTTGCAGCAAGGTGGTAGGTAGGTGTTGAGGAGGCTTTGGATTTAGGGTTTGTAGTTGAACAAATGGGTTGGCATATGGGCAATGGGCAGCGGTTGAACAGTGGGCGGTGGCTGAGGTAGGGTTAGGTGTGGTTGGACAAGAGGCATCGACCGGAAGATAGAGGTACAACTAGACAATGCGTGGATTACTTACGGCTGGGGAAGAAAGTTATGCGGTGGCGCATGTGGCTGGAAAATGAGACCACTCGATGGCGCATGGGGTTGGGAAATCATGCTGGTCGGCATGATTTGGAGCTGTCGAAGCAGTATGTCCATGGTGGCAGCAATTCTGGCGTCGGCAGCGGCTTGGACGGCGGCGCTCACAGTGACTGTCTTTTTGATGCGTTCGGATCCTCCATTGGTTGCTCCTCTAGTTGGGTTCCATCAAGGATGGTTTTTAGGATTTCATCGTCACCTTGCTCTGGTACCATATTAAAAGAGACGGAAAAGAAAAGCACACTGATATACGTGGAAACCCTAATATAGGGAGAGAAATCACGATGGAGAACTTTCTTATTATTTACTAATATAACACAAAGGTACAAGAGGGGAGAATTAGGTAATTAGGGCCTTTGCTAGAGTTTTAGAAGAAATCTGTTCACAGATTCAAGCTCCCGGAAAAGCAACAGATCAGAGGCCCAAAAATCCTCCTCTCCTAAATTTAAGTACTTTGTTTTATCATTGCCCAACGTAAAGGTGAATCTTCAAAGATGAATTTCTGTTAACACTCCAATTGATCCATCTCAGAAGAAAAGAAAAGCTGACTTTGTGTCCCCATTCAGTGTAAGCAGCGAGGAAATTGACCAGATTGAGAAGTCAGATGAACTAGAGAAGCAGAGATGAAAGGAACCAATAGAAGTTGATTTGAATGCTCTGTTTCAGTGTGAAGAGGAACCGGAAGTTGCAACAAGCTTTGGATTGCTTATCTCGAGTTCAGTTTTGTGAAGCACCAGCCGTCTAAAGTCATTGGTAGCTGATTGCAATCTGATTTTGGGCTAATATCCAACAGCATCCTTTGCTAGAGTGAGTTTATTTGAGAATGAAAATCGTGTCGTGGAGCATGAGAGGGTTGAAAGGCCCTTCAAAGAGATGGGCCCTCAGAAGATTCTTGTAGTCACATAATACGGATCTAATGTTAATTCAAAAATTCAAAAAGATGATCTGATATGATAGCAATTTACAGCTTCAACAATAAGATTGAGAAGTGTTTGGAGAAGTTAATTTTTTGGAAAGAAGACAATTTGGGAATGAGAGTAATAAAAAAACTATGATGGGCGTGCTTACCATTAGTGTAGAGAATGAAGAGTTAGAAGAGGGCGTGCTTTAGAGGTTCTTAACAAGAAGTCGTTCCGTTAGTCATCCTTGAGCAGGACTTTGGTAAACTATTCCTGGCAGTTTTGTCATCAAAAGGTGTTACATCAAATTATCTGTCCTTTCAATTGAGGCTTAGGCGATCGCTCAAGAGCAAAAAAAAAAAGGCAGACTAATACATGGCTTTCAAGGAATATTAAGATGTCAGCTCAATGATTTGTCAATATTACTGTTGAAAACACGTGCATAAATATATTTCTTTTGTGTAACATTTGCACAAGGATATTTATCAATAACTTTTTGGTTTCTTTGTTTCATTGTCATCTTTTGCTAATTGATCTTTTCTCTCGGCAGGATATTGTGCATATTTTGATGCAGAGAATGCAATGGACATGTCATTTGCTGAATCAATGGGTGTAAACGTAGATAATCTTCTTATTTCACCTCCAGCTTCTGCTGAAAATCTGTTGTGTGCTGTTAATACTCTAGTTAGAAGTGGATCTGTGGACGTAATTGTGGTTGATACTGTAAGACTACCTACCTTTCCCTTGTGTATTGTATTACTTATCACAAAATGTCCTATTTCATTACGGTTCTCATGATCTTTTTATGCGGAAAACTTCTGGAGGACCAGTTTTAGTAATTATGTCAATAGTGATATTCCTTCATCACTTTTTCCTTTTTCTACTTTTATTCTTTGGACCAATGCTGTTAATTATTGGGGAATGAAATAGTCGACTTTATATTATTGAGTCTTTTGTATCATTCAATCCGCTGATGCAAGTTGATGTTGGCCTATAAAATGGATTCCTCAGGTAGCTGCCCTTGTTCCACAGTGTGAACTTGATGCTCCGATTGGCAGTTCTGAGCGAGACAGTCGACCTCGAGTGATGAACCAAGCATTAAGGAAAATTCATTATTCACTGAAGCTATCGCAAACTCTGATTGTTTTTATTAATCAGGTTGGTACTAAGTTGCACAAGTCCTTCCTCATATTGTCATTTATAAGGTATCAATTACATATGAAGGAATGGTATTTCACTATGCAGCATTATTGTCTATATACAGGTTAGATCTGCAGGATATCAAAATGATTTCGAACAGAAGGATGAGGTAACATGTGGTGGGAATGCCTTGCAATTTTATGCAGCAATCAGACTGAGGCTTTTGAGAAAGGGATTACTGAAGAGGGGTGATAAGGTAAACTTTGACTCAACCATCGTTTGATTCTGCCAGCAACTTAACCATTGTTTGTTATCATTTTTTACCGAGTTCAAAAGGGGAAAAAAGATTTTATTGACTATTACACGATTTATTTTTATATTGTGTGCTTCACAAAATTAAAATTATTTAATTTTTGGGGCACTTTATTAATGAGATCTCTGGTTTTTCATATGAAATGCTTGTGCTACCTTGTTTTAAATCAGACCACGGTTCTTTCTAGGTCACTGGTCTAGCAGTCAGTGTGCAGGTGGTGAAAAATAAGTTAGCCTCATCCATGAAAATGGCAGAACTAGGGATACATTTTGGGAGGGGTTTTGCTGTGAATCTGAGGTTCTGGAATTGGGTTGTGAACATGGAGTTATTCTTAAAGATAAAAGCAACTTTCATATTGAAGGGAGGATTTGCAGCAGCAAGCATGAAGCAGAACAGTATCTGATGGAAAATGAAGATGTTCTTCATAAGGTGGTTGAGATACTAAGGAACCAGTTATTTATACAAGAGTCGAGTCCTTGAGCACCTTGCCATTATCGCAATATGTTTACTGTTGAAGCTATTGTTGGTGCATTTTGGCCGTTTCACATAACCCGAGCAAGTGAAAAATCGTTGGAGAAGTTGAAGATCTTTCGAGGATTCTCGTTTGAGAACTGGAGAGCAGCCATATAATCCATCGTACTTGCCCCAATTAATTGACGGGTAGCGCTTGGAAATGGCCATTGCTGCCACCATTGTTAGCTTACAATTGTCGAGTTTTCAATTTTTTTTTTCAGTTTCCAAGACGAGCAAAAAGCAACCTTGTTGAAGGCGTCTTAACAAGATTATAAGTAGGATTAAATGTGGATATGGAGATTTGATTTAAATGGAAACTATTATTTTTGTTTTTTC

mRNA sequence

ATTTTTGACCCAAATAACAAAGTTTCGGGTGAGTTTGTAATGTCAAATCTCCTTTTTCATTTGACCCTTTGAGAGCACCAAGAACAACAATGGAGCTTCCTCTCTGCAAAATTCCTAAGCGCCAAATTTCTTAATCTTAAAACCCTAACCCAAAAACTCTGCCCAATAAGCTCTACGAGGGATGTCATTTCTCGCACATTCACTCTTCCGCTCTTGCCGTCTCAAGCACTTCGAAGCATCTCGCTTTTCCTCTCTGTTCCACTTCCTCGGCCAGGGAAGGAGAGATGTGATCAGCTGTATGGGTATAGATGCTTGTCATTTTTCCTCACTAGTTGATGTTTGGGAGTACGAATGCGATATGCTTAATGATGATACTAAAACGAGAGAGAAAGATACTGCACTGCATTCGGCAATCTCTCGGGTTGCTGCTGATTTTGGAAAGGAATCTAAGTTGTTTTTGCAGAGGTCTTTTAGCTCCCGATATGCACATGTGATTTCCACTGGATCATTAAAGCTAGACATTGCTCTTGGGATTGGAGGTTTACCTAAGGGAAGAATAATTGAAATTTATGGGCAAGAAGCTTCTGGAAAGACAACATTGGCGCTCCACATCATTAAGGAAGCTCAGAAACTTGGAGGATATTGTGCATATTTTGATGCAGAGAATGCAATGGACATGTCATTTGCTGAATCAATGGGTGTAAACGTAGATAATCTTCTTATTTCACCTCCAGCTTCTGCTGAAAATCTGTTGTGTGCTGTTAATACTCTAGTTAGAAGTGGATCTGTGGACGTAATTGTGGTTGATACTGTAGCTGCCCTTGTTCCACAGTGTGAACTTGATGCTCCGATTGGCAGTTCTGAGCGAGACAGTCGACCTCGAGTGATGAACCAAGCATTAAGGAAAATTCATTATTCACTGAAGCTATCGCAAACTCTGATTGTTTTTATTAATCAGGTTAGATCTGCAGGATATCAAAATGATTTCGAACAGAAGGATGAGGTAACATGTGGTGGGAATGCCTTGCAATTTTATGCAGCAATCAGACTGAGGCTTTTGAGAAAGGGATTACTGAAGAGGGGTGATAAGGTCACTGGTCTAGCAGTCAGTGTGCAGGTGGTGAAAAATAAGTTAGCCTCATCCATGAAAATGGCAGAACTAGGGATACATTTTGGGAGGGGTTTTGCTGTGAATCTGAGGTTCTGGAATTGGGTTGTGAACATGGAGTTATTCTTAAAGATAAAAGCAACTTTCATATTGAAGGGAGGATTTGCAGCAGCAAGCATGAAGCAGAACAGTATCTGATGGAAAATGAAGATGTTCTTCATAAGGTGGTTGAGATACTAAGGAACCAGTTATTTATACAAGAGTCGAGTCCTTGAGCACCTTGCCATTATCGCAATATGTTTACTGTTGAAGCTATTGTTGGTGCATTTTGGCCGTTTCACATAACCCGAGCAAGTGAAAAATCGTTGGAGAAGTTGAAGATCTTTCGAGGATTCTCGTTTGAGAACTGGAGAGCAGCCATATAATCCATCGTACTTGCCCCAATTAATTGACGGGTAGCGCTTGGAAATGGCCATTGCTGCCACCATTGTTAGCTTACAATTGTCGAGTTTTCAATTTTTTTTTTCAGTTTCCAAGACGAGCAAAAAGCAACCTTGTTGAAGGCGTCTTAACAAGATTATAAGTAGGATTAAATGTGGATATGGAGATTTGATTTAAATGGAAACTATTATTTTTGTTTTTTC

Coding sequence (CDS)

ATGTCATTTCTCGCACATTCACTCTTCCGCTCTTGCCGTCTCAAGCACTTCGAAGCATCTCGCTTTTCCTCTCTGTTCCACTTCCTCGGCCAGGGAAGGAGAGATGTGATCAGCTGTATGGGTATAGATGCTTGTCATTTTTCCTCACTAGTTGATGTTTGGGAGTACGAATGCGATATGCTTAATGATGATACTAAAACGAGAGAGAAAGATACTGCACTGCATTCGGCAATCTCTCGGGTTGCTGCTGATTTTGGAAAGGAATCTAAGTTGTTTTTGCAGAGGTCTTTTAGCTCCCGATATGCACATGTGATTTCCACTGGATCATTAAAGCTAGACATTGCTCTTGGGATTGGAGGTTTACCTAAGGGAAGAATAATTGAAATTTATGGGCAAGAAGCTTCTGGAAAGACAACATTGGCGCTCCACATCATTAAGGAAGCTCAGAAACTTGGAGGATATTGTGCATATTTTGATGCAGAGAATGCAATGGACATGTCATTTGCTGAATCAATGGGTGTAAACGTAGATAATCTTCTTATTTCACCTCCAGCTTCTGCTGAAAATCTGTTGTGTGCTGTTAATACTCTAGTTAGAAGTGGATCTGTGGACGTAATTGTGGTTGATACTGTAGCTGCCCTTGTTCCACAGTGTGAACTTGATGCTCCGATTGGCAGTTCTGAGCGAGACAGTCGACCTCGAGTGATGAACCAAGCATTAAGGAAAATTCATTATTCACTGAAGCTATCGCAAACTCTGATTGTTTTTATTAATCAGGTTAGATCTGCAGGATATCAAAATGATTTCGAACAGAAGGATGAGGTAACATGTGGTGGGAATGCCTTGCAATTTTATGCAGCAATCAGACTGAGGCTTTTGAGAAAGGGATTACTGAAGAGGGGTGATAAGGTCACTGGTCTAGCAGTCAGTGTGCAGGTGGTGAAAAATAAGTTAGCCTCATCCATGAAAATGGCAGAACTAGGGATACATTTTGGGAGGGGTTTTGCTGTGAATCTGAGGTTCTGGAATTGGGTTGTGAACATGGAGTTATTCTTAAAGATAAAAGCAACTTTCATATTGAAGGGAGGATTTGCAGCAGCAAGCATGAAGCAGAACAGTATCTGA

Protein sequence

MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDMLNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFILKGGFAAASMKQNSI

Homology

[Close]

BLAST of IVF0000878 vs. ExPASy Swiss-Prot
Match: Q8RY99 (DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 7.7e-107
Identity = 204/340 (60.00%), Postives = 253/340 (74.41%), Query Frame = 0


Query: 26  FHFLGQ--GRRDVISCMGIDACHFSSLVDVWEYECDMLNDDTKTREKDTALHSAISRVAA 85
           F +L Q  GRR V++C G +  + SSLV+  + E D + DD K  EKDTALH A+S+++ 
Sbjct: 16  FSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQLSG 75

Query: 86  DFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALH 145
           DF K+SKL LQR +  R   VISTGSL LD+ALG+GGLPKGR++E+YG+EASGKTTLALH
Sbjct: 76  DFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALH 135

Query: 146 IIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISPPASAENLLCAVNTLVRSGSV 205
           IIKEAQKLGGYCAY DAENAMD S AES+GVN + LLIS P+SAE +L  V+ L +SGSV
Sbjct: 136 IIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSV 195

Query: 206 DVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKIHYSLKLSQTLIVFINQVRSA 265
           DVIVVD+VAAL PQCELDAP+G   RD++ R+M QALRKIHYS+  SQTLIVF+NQVRS 
Sbjct: 196 DVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSH 255

Query: 266 GYQN-DFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGDKVTGLAVSVQVVKNKLASSM 325
              N  F   +EVTCGGNAL F+AAIRL+++R GL+K  +K++GL V VQVVKNKLA   
Sbjct: 256 VKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKLAPGK 315

Query: 326 KMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFILKG 363
           K +ELGIHFG GF V            + L+   ++ ++G
Sbjct: 316 KKSELGIHFGHGFYVEREVLELACEHGVILREGTSYFIEG 355

[Close]

BLAST of IVF0000878 vs. ExPASy Swiss-Prot
Match: Q9ZUP2 (DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2)

HSP 1 Score: 290.8 bits (743), Expect = 2.2e-77
Identity = 155/296 (52.36%), Postives = 207/296 (69.93%), Query Frame = 0


Query: 69  EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLPKGRIIE 128
           +K+ AL  A+ ++ + FGK S ++L R+ S R   V STGS  LD+ALG+GGLPKGR++E
Sbjct: 57  KKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVE 116

Query: 129 IYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISPPASAE 188
           IYG EASGKTTLALH+I EAQK GG C + DAE+A+D S A+++GVN +NLL+S P   E
Sbjct: 117 IYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGE 176

Query: 189 NLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKIHYSLK 248
             L  V+TL+RSGSVDVIVVD+VAALVP+ EL+  +G +    + R+M+QALRK+ +SL 
Sbjct: 177 QALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLS 236

Query: 249 LSQTLIVFINQVRS-AGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGDKVTGL 308
           LSQTL++FINQVRS       F    EVTCGGNAL+FYA++RL + R GL+K+G++ TG 
Sbjct: 237 LSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGS 296

Query: 309 AVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFILKGG 364
            VSV++VKNKLA   + A+  + FG+G           +   + L IK  FI K G
Sbjct: 297 QVSVKIVKNKLAPPFRTAQFELEFGKGIC--------KITEIIDLSIKHKFIAKNG 344

[Close]

BLAST of IVF0000878 vs. ExPASy Swiss-Prot
Match: Q3ST50 (Protein RecA OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=recA PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.0e-66
Identity = 135/268 (50.37%), Postives = 183/268 (68.28%), Query Frame = 0


Query: 69  EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLPKGRIIE 128
           +K  AL +A+S++   FGK S + L ++  S    VIS+GSL LDIALG+GGLPKGRI+E
Sbjct: 15  DKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIVE 74

Query: 129 IYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISPPASAE 188
           +YG E+SGKTTLALH + EAQK GG CA+ DAE+A+D  +A  +GVNVD+LLIS P   E
Sbjct: 75  VYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHGE 134

Query: 189 NLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKIHYSLK 248
             L   +TLVRSG+VDV+++D+VAALVP+ EL+  +G +    + R+M+QALRK+  S+ 
Sbjct: 135 QALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASIN 194

Query: 249 LSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGDKVTGLA 308
            S T+++FINQ+R            E T GGNAL+FYA++RL + R G +K  D+V G  
Sbjct: 195 KSNTMVIFINQIRMK--IGVMYGSPETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNQ 254

Query: 309 VSVQVVKNKLASSMKMAELGIHFGRGFA 337
             V+VVKNKLA   K  E  I +G G +
Sbjct: 255 TRVKVVKNKLAPPFKQVEFDIMYGEGIS 280

[Close]

BLAST of IVF0000878 vs. ExPASy Swiss-Prot
Match: Q2W9P9 (Protein RecA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=recA PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 8.6e-66
Identity = 136/273 (49.82%), Postives = 185/273 (67.77%), Query Frame = 0


Query: 64  DTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLPK 123
           D  T ++  AL +A+S++   FGK S + L          V+STGSL LD+ALGIGG+P+
Sbjct: 10  DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPR 69

Query: 124 GRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISP 183
           GRIIE+YG E+SGKTTLALHII EAQK GG CA+ DAE+A+D S+A  +GVN+D LLIS 
Sbjct: 70  GRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQ 129

Query: 184 PASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKI 243
           P + E  L   +TLVRSG+VDV+VVD+VAALVP+ EL+  +G +      R+M+QALRK+
Sbjct: 130 PDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 189

Query: 244 HYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGDK 303
             S+  S+T+++FINQ+R            E T GGNAL+FYA++R+ + R G +K  D+
Sbjct: 190 TGSVSKSKTIVIFINQIRMK--IGVMFGNPETTTGGNALKFYASVRMEIRRVGAIKDRDE 249

Query: 304 VTGLAVSVQVVKNKLASSMKMAELGIHFGRGFA 337
           V G    V+VVKNKLA   K+ +  I +G G +
Sbjct: 250 VVGNQTRVKVVKNKLAPPFKVVDFDIMYGEGIS 280

[Close]

BLAST of IVF0000878 vs. ExPASy Swiss-Prot
Match: Q89I84 (Protein RecA OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=recA PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.9e-65
Identity = 135/266 (50.75%), Postives = 181/266 (68.05%), Query Frame = 0


Query: 69  EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLPKGRIIE 128
           +K  AL +A+S++   FGK S + L ++  S     +S+GSL LDIALGIGGLPKGR++E
Sbjct: 15  DKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVVE 74

Query: 129 IYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISPPASAE 188
           IYG E+SGKTTLALH + EAQK GG CA+ DAE+A+D  +A  +GVN+D LLIS P + E
Sbjct: 75  IYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGE 134

Query: 189 NLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKIHYSLK 248
             L   +TLVRSG+VDV+VVD+VAALVP+ EL+  +G +    + R+M+QALRK+  S+ 
Sbjct: 135 QALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASIN 194

Query: 249 LSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGDKVTGLA 308
            S T+++FINQ+R            E T GGNAL+FYA++RL + R G +K  D+V G  
Sbjct: 195 KSHTMVIFINQIRMK--IGVMYGSPETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNT 254

Query: 309 VSVQVVKNKLASSMKMAELGIHFGRG 335
             V+VVKNKLA   K  E  I +G G
Sbjct: 255 TRVKVVKNKLAPPFKQVEFDIMYGEG 278

[Close]

BLAST of IVF0000878 vs. ExPASy TrEMBL
Match: A0A5D3BYT7 (DNA repair protein recA-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00010 PE=3 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 1.1e-185
Identity = 340/362 (93.92%), Postives = 344/362 (95.03%), Query Frame = 0


Query: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60
           MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM
Sbjct: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60

Query: 61  LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120
           LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG
Sbjct: 61  LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120

Query: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180
           LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL
Sbjct: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180

Query: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240
           ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL
Sbjct: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240

Query: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300
           RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR
Sbjct: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300

Query: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFIL 360
           GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGF              + LK K+ F +
Sbjct: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFHI 360

Query: 361 KG 363
           +G
Sbjct: 361 EG 362

[Close]

BLAST of IVF0000878 vs. ExPASy TrEMBL
Match: A0A5A7VKJ2 (DNA repair protein recA-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001200 PE=3 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 5.6e-185
Identity = 339/362 (93.65%), Postives = 343/362 (94.75%), Query Frame = 0


Query: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60
           MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM
Sbjct: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60

Query: 61  LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120
           LNDDTKT EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG
Sbjct: 61  LNDDTKTTEKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120

Query: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180
           LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL
Sbjct: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180

Query: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240
           ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL
Sbjct: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240

Query: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300
           RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR
Sbjct: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300

Query: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFIL 360
           GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGF              + LK K+ F +
Sbjct: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFHI 360

Query: 361 KG 363
           +G
Sbjct: 361 EG 362

[Close]

BLAST of IVF0000878 vs. ExPASy TrEMBL
Match: A0A1S3CNF8 (DNA repair protein recA homolog 2, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502456 PE=3 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 5.6e-185
Identity = 339/362 (93.65%), Postives = 343/362 (94.75%), Query Frame = 0


Query: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60
           MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM
Sbjct: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60

Query: 61  LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120
           LNDDTKT EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG
Sbjct: 61  LNDDTKTTEKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120

Query: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180
           LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL
Sbjct: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180

Query: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240
           ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL
Sbjct: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240

Query: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300
           RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR
Sbjct: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300

Query: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFIL 360
           GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGF              + LK K+ F +
Sbjct: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFHI 360

Query: 361 KG 363
           +G
Sbjct: 361 EG 362

[Close]

BLAST of IVF0000878 vs. ExPASy TrEMBL
Match: A0A1S3CM13 (DNA repair protein recA homolog 2, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502456 PE=3 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 3.0e-170
Identity = 322/362 (88.95%), Postives = 326/362 (90.06%), Query Frame = 0


Query: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60
           MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSL          
Sbjct: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSL---------- 60

Query: 61  LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120
                   EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG
Sbjct: 61  --------EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120

Query: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180
           LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL
Sbjct: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180

Query: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240
           ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL
Sbjct: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240

Query: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300
           RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR
Sbjct: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300

Query: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFIL 360
           GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGF              + LK K+ F +
Sbjct: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFHI 344

Query: 361 KG 363
           +G
Sbjct: 361 EG 344

[Close]

BLAST of IVF0000878 vs. ExPASy TrEMBL
Match: A0A0A0L331 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338990 PE=3 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 3.3e-169
Identity = 313/360 (86.94%), Postives = 326/360 (90.56%), Query Frame = 0


Query: 3   FLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDMLN 62
           FL+HSLFR CRLKHFE SRFSSL H L QGRRDVIS +GIDACHFSSLVDVWEYECDMLN
Sbjct: 4   FLSHSLFRFCRLKHFEPSRFSSLSHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLN 63

Query: 63  DDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLP 122
           DDTKT EKDTALHSAIS+VAADFGK+SKLFLQR  SSR+A VISTGSLKLDIALGIGGLP
Sbjct: 64  DDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLP 123

Query: 123 KGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLIS 182
           KGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLIS
Sbjct: 124 KGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLIS 183

Query: 183 PPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRK 242
           PPASAENLLCAVNTLVRSGSVDV+VVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRK
Sbjct: 184 PPASAENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRK 243

Query: 243 IHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGD 302
           IHYSLKLSQTL+VFINQVRSAGYQN FEQKDEVTCGGNALQFYAA+RLRLLRKGLLK GD
Sbjct: 244 IHYSLKLSQTLVVFINQVRSAGYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKGLLKSGD 303

Query: 303 KVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFILKG 362
           KVTG+AV VQVVKNKLAS MKM ELGIHFGRGF              + LK  + F ++G
Sbjct: 304 KVTGVAVGVQVVKNKLASPMKMVELGIHFGRGFCCESEVLELGCEHGVILKDGSNFHIEG 363

[Close]

BLAST of IVF0000878 vs. NCBI nr
Match: TYK04280.1 (DNA repair protein recA-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 659 bits (1700), Expect = 8.46e-237
Identity = 340/362 (93.92%), Postives = 344/362 (95.03%), Query Frame = 0


Query: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60
           MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM
Sbjct: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60

Query: 61  LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120
           LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG
Sbjct: 61  LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120

Query: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180
           LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL
Sbjct: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180

Query: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240
           ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL
Sbjct: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240

Query: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300
           RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR
Sbjct: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300

Query: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFIL 360
           GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGF              + LK K+ F +
Sbjct: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFHI 360

Query: 361 KG 362
           +G
Sbjct: 361 EG 362

[Close]

BLAST of IVF0000878 vs. NCBI nr
Match: XP_008464617.1 (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis melo] >KAA0067944.1 DNA repair protein recA-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 657 bits (1694), Expect = 6.94e-236
Identity = 339/362 (93.65%), Postives = 343/362 (94.75%), Query Frame = 0


Query: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60
           MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM
Sbjct: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60

Query: 61  LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120
           LNDDTKT EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG
Sbjct: 61  LNDDTKTTEKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120

Query: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180
           LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL
Sbjct: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180

Query: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240
           ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL
Sbjct: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240

Query: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300
           RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR
Sbjct: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300

Query: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFIL 360
           GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGF              + LK K+ F +
Sbjct: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFHI 360

Query: 361 KG 362
           +G
Sbjct: 361 EG 362

[Close]

BLAST of IVF0000878 vs. NCBI nr
Match: XP_008464618.1 (PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 608 bits (1568), Expect = 5.51e-217
Identity = 322/362 (88.95%), Postives = 326/362 (90.06%), Query Frame = 0


Query: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDM 60
           MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSL          
Sbjct: 1   MSFLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSL---------- 60

Query: 61  LNDDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120
                   EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG
Sbjct: 61  --------EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGG 120

Query: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180
           LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL
Sbjct: 121 LPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLL 180

Query: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240
           ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL
Sbjct: 181 ISPPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQAL 240

Query: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300
           RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR
Sbjct: 241 RKIHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKR 300

Query: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFIL 360
           GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGF              + LK K+ F +
Sbjct: 301 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRGFCCESEVLELGCEHGVILKDKSNFHI 344

Query: 361 KG 362
           +G
Sbjct: 361 EG 344

[Close]

BLAST of IVF0000878 vs. NCBI nr
Match: XP_004142657.1 (DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 604 bits (1558), Expect = 3.69e-215
Identity = 309/333 (92.79%), Postives = 318/333 (95.50%), Query Frame = 0


Query: 3   FLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDMLN 62
           FL+HSLFR CRLKHFE SRFSSL H L QGRRDVIS +GIDACHFSSLVDVWEYECDMLN
Sbjct: 4   FLSHSLFRFCRLKHFEPSRFSSLSHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLN 63

Query: 63  DDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLP 122
           DDTKT EKDTALHSAIS+VAADFGK+SKLFLQR  SSR+A VISTGSLKLDIALGIGGLP
Sbjct: 64  DDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLP 123

Query: 123 KGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLIS 182
           KGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLIS
Sbjct: 124 KGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLIS 183

Query: 183 PPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRK 242
           PPASAENLLCAVNTLVRSGSVDV+VVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRK
Sbjct: 184 PPASAENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRK 243

Query: 243 IHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGD 302
           IHYSLKLSQTL+VFINQVRSAGYQN FEQKDEVTCGGNALQFYAA+RLRLLRKGLLK GD
Sbjct: 244 IHYSLKLSQTLVVFINQVRSAGYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKGLLKSGD 303

Query: 303 KVTGLAVSVQVVKNKLASSMKMAELGIHFGRGF 335
           KVTG+AV VQVVKNKLAS MKM ELGIHFGRGF
Sbjct: 304 KVTGVAVGVQVVKNKLASPMKMVELGIHFGRGF 336

[Close]

BLAST of IVF0000878 vs. NCBI nr
Match: XP_011653756.1 (DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis sativus] >KGN54757.2 hypothetical protein Csa_011949 [Cucumis sativus])

HSP 1 Score: 556 bits (1432), Expect = 2.88e-196
Identity = 292/333 (87.69%), Postives = 301/333 (90.39%), Query Frame = 0


Query: 3   FLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDMLN 62
           FL+HSLFR CRLKHFE SRFSSL H L QGRRDVIS +GIDACHFSSL            
Sbjct: 4   FLSHSLFRFCRLKHFEPSRFSSLSHSLLQGRRDVISYVGIDACHFSSL------------ 63

Query: 63  DDTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLP 122
                 EKDTALHSAIS+VAADFGK+SKLFLQR  SSR+A VISTGSLKLDIALGIGGLP
Sbjct: 64  ------EKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLP 123

Query: 123 KGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLIS 182
           KGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLIS
Sbjct: 124 KGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLIS 183

Query: 183 PPASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRK 242
           PPASAENLLCAVNTLVRSGSVDV+VVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRK
Sbjct: 184 PPASAENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRK 243

Query: 243 IHYSLKLSQTLIVFINQVRSAGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGD 302
           IHYSLKLSQTL+VFINQVRSAGYQN FEQKDEVTCGGNALQFYAA+RLRLLRKGLLK GD
Sbjct: 244 IHYSLKLSQTLVVFINQVRSAGYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKGLLKSGD 303

Query: 303 KVTGLAVSVQVVKNKLASSMKMAELGIHFGRGF 335
           KVTG+AV VQVVKNKLAS MKM ELGIHFGRGF
Sbjct: 304 KVTGVAVGVQVVKNKLASPMKMVELGIHFGRGF 318

[Close]

BLAST of IVF0000878 vs. TAIR 10
Match: AT3G10140.1 (RECA homolog 3 )

HSP 1 Score: 388.7 bits (997), Expect = 5.5e-108
Identity = 204/340 (60.00%), Postives = 253/340 (74.41%), Query Frame = 0


Query: 26  FHFLGQ--GRRDVISCMGIDACHFSSLVDVWEYECDMLNDDTKTREKDTALHSAISRVAA 85
           F +L Q  GRR V++C G +  + SSLV+  + E D + DD K  EKDTALH A+S+++ 
Sbjct: 16  FSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQLSG 75

Query: 86  DFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALH 145
           DF K+SKL LQR +  R   VISTGSL LD+ALG+GGLPKGR++E+YG+EASGKTTLALH
Sbjct: 76  DFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALH 135

Query: 146 IIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISPPASAENLLCAVNTLVRSGSV 205
           IIKEAQKLGGYCAY DAENAMD S AES+GVN + LLIS P+SAE +L  V+ L +SGSV
Sbjct: 136 IIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSV 195

Query: 206 DVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKIHYSLKLSQTLIVFINQVRSA 265
           DVIVVD+VAAL PQCELDAP+G   RD++ R+M QALRKIHYS+  SQTLIVF+NQVRS 
Sbjct: 196 DVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSH 255

Query: 266 GYQN-DFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGDKVTGLAVSVQVVKNKLASSM 325
              N  F   +EVTCGGNAL F+AAIRL+++R GL+K  +K++GL V VQVVKNKLA   
Sbjct: 256 VKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKLAPGK 315

Query: 326 KMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFILKG 363
           K +ELGIHFG GF V            + L+   ++ ++G
Sbjct: 316 KKSELGIHFGHGFYVEREVLELACEHGVILREGTSYFIEG 355

[Close]

BLAST of IVF0000878 vs. TAIR 10
Match: AT2G19490.1 (recA DNA recombination family protein )

HSP 1 Score: 290.8 bits (743), Expect = 1.6e-78
Identity = 155/296 (52.36%), Postives = 207/296 (69.93%), Query Frame = 0


Query: 69  EKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLPKGRIIE 128
           +K+ AL  A+ ++ + FGK S ++L R+ S R   V STGS  LD+ALG+GGLPKGR++E
Sbjct: 57  KKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVE 116

Query: 129 IYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISPPASAE 188
           IYG EASGKTTLALH+I EAQK GG C + DAE+A+D S A+++GVN +NLL+S P   E
Sbjct: 117 IYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGE 176

Query: 189 NLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKIHYSLK 248
             L  V+TL+RSGSVDVIVVD+VAALVP+ EL+  +G +    + R+M+QALRK+ +SL 
Sbjct: 177 QALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLS 236

Query: 249 LSQTLIVFINQVRS-AGYQNDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLKRGDKVTGL 308
           LSQTL++FINQVRS       F    EVTCGGNAL+FYA++RL + R GL+K+G++ TG 
Sbjct: 237 LSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGS 296

Query: 309 AVSVQVVKNKLASSMKMAELGIHFGRGFAVNLRFWNWVVNMELFLKIKATFILKGG 364
            VSV++VKNKLA   + A+  + FG+G           +   + L IK  FI K G
Sbjct: 297 QVSVKIVKNKLAPPFRTAQFELEFGKGIC--------KITEIIDLSIKHKFIAKNG 344

[Close]

BLAST of IVF0000878 vs. TAIR 10
Match: AT1G79050.1 (recA DNA recombination family protein )

HSP 1 Score: 196.8 bits (499), Expect = 3.0e-50
Identity = 114/274 (41.61%), Postives = 174/274 (63.50%), Query Frame = 0


Query: 64  DTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLPK 123
           D++  ++  AL +A++ + + FGK S   L  S         S+G L LD+ALG GGLPK
Sbjct: 77  DSRFLDRQKALEAAMNDINSSFGKGSVTRL-GSAGGALVETFSSGILTLDLALG-GGLPK 136

Query: 124 GRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISP 183
           GR++EIYG E+SGKTTLALH I E QKLGG     DAE+A D ++++++GV+V+NL++  
Sbjct: 137 GRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 196

Query: 184 PASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKI 243
           P + E  L   + + RSG+VD+I VD+V+AL P+ E++  IG  +   + R+M+QALRK+
Sbjct: 197 PDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 256

Query: 244 HYSLKLSQTLIVFINQVRSAGYQ-NDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLK--R 303
             +   +   ++F+NQ+R   Y+   +    EVT GG AL+F+A++RL +   G +K  +
Sbjct: 257 SGNASKAGCTLIFLNQIR---YKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSK 316

Query: 304 GDKVTGLAVSVQVVKNKLASSMKMAELGIHFGRG 335
           GD+  GL   V+V K+K++   K AE  I FG G
Sbjct: 317 GDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEG 345

[Close]

BLAST of IVF0000878 vs. TAIR 10
Match: AT3G32920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.6e-49
Identity = 108/213 (50.70%), Postives = 144/213 (67.61%), Query Frame = 0


Query: 91  LFLQRSFSSRYAHVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQK 150
           ++L R+ S R   V STGS  LD+ALG+GGLPKGR++EIYG EASGKT LALH++     
Sbjct: 1   MYLSRAVSPRNVPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHML----- 60

Query: 151 LGGYCAYFDAENAMDMSFAESMGVNVDNLLISPPASAENLLCAVNTLVRSGSVDVIVVDT 210
                        +  S A+++GVN +NLL+S P   +  L  V+TL++SGSVDVIVVD+
Sbjct: 61  ----------SMLLIRSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDS 120

Query: 211 VAALVPQCELDAPIGSSERDSRPRVMNQALRKIHYSLKLSQTLIVFINQVRSAGYQNDFE 270
           VAALVP+ ELD  +G +    + R+M+QALRK  +SL LSQTL++FINQVR       F 
Sbjct: 121 VAALVPKGELDGEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRER-----FG 180

Query: 271 QKDEVTCGGNALQFYAAIRLRLLRKGLLKRGDK 304
              EVT GGNAL+FYA +RL + R GL+K+G++
Sbjct: 181 GPTEVTSGGNALKFYAPMRLDIKRIGLIKKGEE 193

[Close]

BLAST of IVF0000878 vs. TAIR 10
Match: AT1G79050.2 (recA DNA recombination family protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-47
Identity = 109/266 (40.98%), Postives = 169/266 (63.53%), Query Frame = 0


Query: 64  DTKTREKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLPK 123
           D++  ++  AL +A++ + + FGK S   L  S         S+G L LD+ALG GGLPK
Sbjct: 77  DSRFLDRQKALEAAMNDINSSFGKGSVTRL-GSAGGALVETFSSGILTLDLALG-GGLPK 136

Query: 124 GRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISP 183
           GR++EIYG E+SGKTTLALH I E QKLGG     DAE+A D ++++++GV+V+NL++  
Sbjct: 137 GRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 196

Query: 184 PASAENLLCAVNTLVRSGSVDVIVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKI 243
           P + E  L   + + RSG+VD+I VD+V+AL P+ E++  IG  +   + R+M+QALRK+
Sbjct: 197 PDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 256

Query: 244 HYSLKLSQTLIVFINQVRSAGYQ-NDFEQKDEVTCGGNALQFYAAIRLRLLRKGLLK--R 303
             +   +   ++F+NQ+R   Y+   +    EVT GG AL+F+A++RL +   G +K  +
Sbjct: 257 SGNASKAGCTLIFLNQIR---YKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSK 316

Query: 304 GDKVTGLAVSVQVVKNKLASSMKMAE 327
           GD+  GL   V+V K+K++   K  E
Sbjct: 317 GDEDIGLRARVRVQKSKVSRPYKQEE 337

The following BLAST results are available for this feature:

BLAST of IVF0000878 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RY99	7.7e-107	60.00	DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9ZUP2	2.2e-77	52.36	DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q3ST50	5.0e-66	50.37	Protein RecA OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 10...	[more]
Q2W9P9	8.6e-66	49.82	Protein RecA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=3421...	[more]
Q89I84	1.9e-65	50.75	Protein RecA OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / I...	[more]

BLAST of IVF0000878 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BYT7	1.1e-185	93.92	DNA repair protein recA-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7VKJ2	5.6e-185	93.65	DNA repair protein recA-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CNF8	5.6e-185	93.65	DNA repair protein recA homolog 2, mitochondrial isoform X1 OS=Cucumis melo OX=3...	[more]
A0A1S3CM13	3.0e-170	88.95	DNA repair protein recA homolog 2, mitochondrial isoform X2 OS=Cucumis melo OX=3...	[more]
A0A0A0L331	3.3e-169	86.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338990 PE=3 SV=1	[more]

BLAST of IVF0000878 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04280.1	8.46e-237	93.92	DNA repair protein recA-like protein 2 [Cucumis melo var. makuwa]	[more]
XP_008464617.1	6.94e-236	93.65	PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis ...	[more]
XP_008464618.1	5.51e-217	88.95	PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis ...	[more]
XP_004142657.1	3.69e-215	92.79	DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis sativus]	[more]
XP_011653756.1	2.88e-196	87.69	DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis sativus] >K...	[more]

BLAST of IVF0000878 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10140.1	5.5e-108	60.00	RECA homolog 3	[more]
AT2G19490.1	1.6e-78	52.36	recA DNA recombination family protein	[more]
AT1G79050.1	3.0e-50	41.61	recA DNA recombination family protein	[more]
AT3G32920.1	2.6e-49	50.70	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G79050.2	1.4e-47	40.98	recA DNA recombination family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013765	DNA recombination and repair protein RecA	PRINTS	PR00142	RECA	coord: 278..306 score: 49.03 coord: 311..340 score: 39.47 coord: 193..222 score: 54.89 coord: 159..188 score: 49.52 coord: 231..260 score: 43.82
IPR013765	DNA recombination and repair protein RecA	PFAM	PF00154	RecA	coord: 73..335 e-value: 3.4E-84 score: 282.4
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900	RECA	coord: 26..364
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 123..302 e-value: 4.2E-4 score: 29.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 100..372 e-value: 4.0E-85 score: 287.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 73..334
None	No IPR available	PANTHER	PTHR45900:SF4	DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL	coord: 26..364
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 101..260 score: 29.254713
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 269..335 score: 17.427309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000878.1	IVF0000878.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding