IVF0000853 (gene) Melon (IVF77) v1

Overview


Name	IVF0000853
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	MYB transcription factor
Location	chr11: 28888060 .. 28889251 (+)
RNA-Seq Expression	IVF0000853
Synteny	IVF0000853

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTGCTTCCTCATTTCCGGCAAGTGGGTGCAAATTCACAGCAGAGGAGGAAAAAATGGTGATAGAATTGCAAGCGCAGTTTGGGAACAAATGGGCGAAGATAGCGACTTACTTGCCGGGCCGGACCGATAATGATGTAAAGAATTTTTGGAGTAGTAGGCAAAAGAGATTGGCTAGGCTTCTGCAGACATCACCTGCTCCATCCAAATTGCAAAGAAGTGCTAAAAAGGAAACGCCAGTCGATTTTGATATTCCCACCATGGAGGTATTTTCTTTGCTAATATCTAGTGATATCTTAGATCTTAGATTCCTTGCAGTTTGTAGTTTTTTAGTTTTCTAAGAGTTTTAGAACTTTTAGTTTCGACTAAGATGCAAAAGTTATCCAAATTAGGATGTGTAATGGTCATTTCGAAGACGATATACAGGCACTTTATGGTGACTAATGTTGTTGGTTTGATCTTTTATCAGTTTGATGACGAGATTTTATGATCAATGGGGCATTATGACGCTTCTTTTTGTTGAAGTTTCTATAGATTTTGATGTATAGTTCAATTTCCATAACTTTCTTTTCGAACTTTCAAGGCACCAAAGCTGAGCTCTGCATCAGAGGGAGAGTCATCCTCAAGGCCAATGTTGTGTTTGTCGTCTTGCCGTGCCGATTATGTTGAACCTGTTAATATGTTCTGCTCGTTGCCAGATTCGTACTGTCCCAAATTACTCGGTTTTGGCCAAGACTTTCTTCAACCTGAATTCAACTCGTTTCAGACCTCAATCAAATTCGAACAACAAAGCAATTTCCACACTCAGTCACTAAGTTCAACATTTTCATCTCAAGGACTCCATGATCCCAACTTTGATGTTTTTCTTGAAACATTGGATGTTTCTCAATTAACTAACGAAGTTCAATTTCCATCTGGGCTGCAATTCTACGAACCGATAGGATGTTGCTCAAGTCATGATGATGTAAGGGAGAACGTCGACAACCCGGAAAGCTTCTTCAGTGAGTTTCCTGCTGACATATTTGAACATATAGAGCCGCCTCCGAGCTCACCGGAGAACTGATACTTTGCCTCTTTCATTTTGTAAAATTGTTTGGACTTTGATTTTGCATCTGTATCTGTGAAATTGATGTGTAATGTTTTGCCTACTCAATTGGTATACTACACAATATGTTTGTTTTCTCATTTGAAC

mRNA sequence

CTTGTGCTTCCTCATTTCCGGCAAGTGGGTGCAAATTCACAGCAGAGGAGGAAAAAATGGTGATAGAATTGCAAGCGCAGTTTGGGAACAAATGGGCGAAGATAGCGACTTACTTGCCGGGCCGGACCGATAATGATGTAAAGAATTTTTGGAGTAGTAGGCAAAAGAGATTGGCTAGGCTTCTGCAGACATCACCTGCTCCATCCAAATTGCAAAGAAGTGCTAAAAAGGAAACGCCAGTCGATTTTGATATTCCCACCATGGAGGCACCAAAGCTGAGCTCTGCATCAGAGGGAGAGTCATCCTCAAGGCCAATGTTGTGTTTGTCGTCTTGCCGTGCCGATTATGTTGAACCTGTTAATATGTTCTGCTCGTTGCCAGATTCGTACTGTCCCAAATTACTCGGTTTTGGCCAAGACTTTCTTCAACCTGAATTCAACTCGTTTCAGACCTCAATCAAATTCGAACAACAAAGCAATTTCCACACTCAGTCACTAAGTTCAACATTTTCATCTCAAGGACTCCATGATCCCAACTTTGATGTTTTTCTTGAAACATTGGATGTTTCTCAATTAACTAACGAAGTTCAATTTCCATCTGGGCTGCAATTCTACGAACCGATAGGATGTTGCTCAAGTCATGATGATGTAAGGGAGAACGTCGACAACCCGGAAAGCTTCTTCAGTGAGTTTCCTGCTGACATATTTGAACATATAGAGCCGCCTCCGAGCTCACCGGAGAACTGATACTTTGCCTCTTTCATTTTGTAAAATTGTTTGGACTTTGATTTTGCATCTGTATCTGTGAAATTGATGTGTAATGTTTTGCCTACTCAATTGGTATACTACACAATATGTTTGTTTTCTCATTTGAAC

Coding sequence (CDS)

ATGGTGATAGAATTGCAAGCGCAGTTTGGGAACAAATGGGCGAAGATAGCGACTTACTTGCCGGGCCGGACCGATAATGATGTAAAGAATTTTTGGAGTAGTAGGCAAAAGAGATTGGCTAGGCTTCTGCAGACATCACCTGCTCCATCCAAATTGCAAAGAAGTGCTAAAAAGGAAACGCCAGTCGATTTTGATATTCCCACCATGGAGGCACCAAAGCTGAGCTCTGCATCAGAGGGAGAGTCATCCTCAAGGCCAATGTTGTGTTTGTCGTCTTGCCGTGCCGATTATGTTGAACCTGTTAATATGTTCTGCTCGTTGCCAGATTCGTACTGTCCCAAATTACTCGGTTTTGGCCAAGACTTTCTTCAACCTGAATTCAACTCGTTTCAGACCTCAATCAAATTCGAACAACAAAGCAATTTCCACACTCAGTCACTAAGTTCAACATTTTCATCTCAAGGACTCCATGATCCCAACTTTGATGTTTTTCTTGAAACATTGGATGTTTCTCAATTAACTAACGAAGTTCAATTTCCATCTGGGCTGCAATTCTACGAACCGATAGGATGTTGCTCAAGTCATGATGATGTAAGGGAGAACGTCGACAACCCGGAAAGCTTCTTCAGTGAGTTTCCTGCTGACATATTTGAACATATAGAGCCGCCTCCGAGCTCACCGGAGAACTGA

Protein sequence

MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKETPVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQDFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFPSGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN

Homology

[Close]

BLAST of IVF0000853 vs. ExPASy Swiss-Prot
Match: A0A178VEK7 (Transcription factor DUO1 OS=Arabidopsis thaliana OX=3702 GN=DUO1 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.2e-19
Identity = 79/232 (34.05%), Postives = 110/232 (47.41%), Query Frame = 0


Query: 2   VIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKETP 61
           VIELQ++FGNKWA+IATYLPGRTDNDVKNFWSSRQKRLAR+L  S   S    + K  + 
Sbjct: 78  VIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLARILHNSSDASSSSFNPKSSSS 137

Query: 62  VDFDIPTMEAPKLSSASEG--------ESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCP 121
                  ++  + SS   G         SS   M+  SS +    + V     L      
Sbjct: 138 HRLKGKNVKPIRQSSQGFGLVEEEVTVSSSCSQMVPYSSDQVG--DEVLRLPDLGVKLEH 197

Query: 122 KLLGFGQDFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQL 181
           +   FG D +  E++  Q     +  S F  +S         L DP +   L   D    
Sbjct: 198 QPFAFGTDLVLAEYSDSQNDANQQAISPFSPESRELL---ARLDDPFYYDILGPAD---- 257

Query: 182 TNEVQFPSGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPS 226
           ++E  F     F+EP         V ++ +  + F  +FPAD+F+ ++P PS
Sbjct: 258 SSEPLFALPQPFFEPSPVPRRCRHVSKD-EEADVFLDDFPADMFDQVDPIPS 299

[Close]

BLAST of IVF0000853 vs. ExPASy Swiss-Prot
Match: Q0JB89 (Probable transcription factor MYB58 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB58 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPS---KLQRSAK 60
           +VIELQAQFGNKWA+IATYL GRTDNDVKNFWS+RQKRLARLL+  P P+       S K
Sbjct: 95  VVIELQAQFGNKWARIATYLQGRTDNDVKNFWSTRQKRLARLLR-GPLPAARPNKHNSGK 154

Query: 61  KETPVDFDIPTMEAP-KLSSASEGESS 84
            + P    + +  A    SSAS  ++S
Sbjct: 155 GKAPSSSSLDSQTATFHQSSASLDQAS 180

[Close]

BLAST of IVF0000853 vs. ExPASy Swiss-Prot
Match: Q94FL7 (Transcription factor MYB120 OS=Arabidopsis thaliana OX=3702 GN=MYB120 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09
Identity = 25/41 (60.98%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLAR 42
           ++I+L AQ GNKWA++A  LPGRTDN++KN+W++R KRL R
Sbjct: 91  LIIQLHAQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRLLR 131

[Close]

BLAST of IVF0000853 vs. ExPASy Swiss-Prot
Match: L7R9Z0 (MYB-like transcription factor EOBI OS=Petunia hybrida OX=4102 GN=EOBI PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 27/59 (45.76%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSR-QKRLARLLQTSPAPSKLQRSAKK 59
           +++EL A++GN+W+KIA +LPGRTDN++KN+W +R QK + +  Q    PSK +++ +K
Sbjct: 78  LIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQADQNMKKPSKCEQNDQK 136

[Close]

BLAST of IVF0000853 vs. ExPASy Swiss-Prot
Match: B3VTV7 (Transcription factor MYB60 OS=Vitis vinifera OX=29760 GN=MYB60 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.5e-09
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAP 50
           M+I LQA  GNKWA IA+YLP RTDND+KN+W++  K+  +  Q++ +P
Sbjct: 77  MIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKIKKFQSALSP 125

[Close]

BLAST of IVF0000853 vs. ExPASy TrEMBL
Match: A0A5A7T9S7 (Myb-related protein 308-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002720 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 3.8e-128
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 60
           MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET
Sbjct: 78  MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 137

Query: 61  PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 120
           PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ
Sbjct: 138 PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 197

Query: 121 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP 180
           DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP
Sbjct: 198 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP 257

Query: 181 SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 230
           SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN
Sbjct: 258 SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 306

[Close]

BLAST of IVF0000853 vs. ExPASy TrEMBL
Match: A0A1S3CB01 (myb-related protein 308-like OS=Cucumis melo OX=3656 GN=LOC103498816 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 3.8e-128
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 60
           MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET
Sbjct: 78  MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 137

Query: 61  PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 120
           PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ
Sbjct: 138 PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 197

Query: 121 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP 180
           DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP
Sbjct: 198 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP 257

Query: 181 SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 230
           SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN
Sbjct: 258 SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 306

[Close]

BLAST of IVF0000853 vs. ExPASy TrEMBL
Match: A0A0A0KFL9 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G105160 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 9.5e-111
Identity = 207/229 (90.39%), Postives = 214/229 (93.45%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 60
           MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKE 
Sbjct: 28  MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKEK 87

Query: 61  PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 120
           P+DFDIP+MEAPKLSSASEGESS RPM CLSSC A+ VEP+NMFCS+PD Y PKLLGFGQ
Sbjct: 88  PIDFDIPSMEAPKLSSASEGESSLRPMSCLSSCCAENVEPLNMFCSVPDPYSPKLLGFGQ 147

Query: 121 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP 180
           DFLQPEFN    SIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP
Sbjct: 148 DFLQPEFN----SIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP 207

Query: 181 SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 230
           SGLQFYEP+ CCSSHD VRENVDNPESFFSEFPADIFE +EP PSSPEN
Sbjct: 208 SGLQFYEPMECCSSHDVVRENVDNPESFFSEFPADIFE-LEPLPSSPEN 251

[Close]

BLAST of IVF0000853 vs. ExPASy TrEMBL
Match: A0A6J1F3T0 (transcription factor DUO1-like OS=Cucurbita moschata OX=3662 GN=LOC111439723 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.2e-94
Identity = 180/230 (78.26%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 60
           +VIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQ S  PSKLQRS +KE 
Sbjct: 76  VVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQNSTTPSKLQRSTRKEK 135

Query: 61  PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 120
           PVDFD+P+MEAPKLSSAS+G++SSRPM C SS  AD  E V+MFCSLPD Y PKLLGFGQ
Sbjct: 136 PVDFDVPSMEAPKLSSASDGDASSRPMSCSSSFSADNAEAVDMFCSLPDLYRPKLLGFGQ 195

Query: 121 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQG-LHDPNFDVFLETLDVSQLTNEVQF 180
           DFLQPEFN F  +IK + Q+NFH   L STFSSQG LHDPN DVFLE LDVSQL NEVQF
Sbjct: 196 DFLQPEFNPFPITIKSDPQTNFHPLPLGSTFSSQGLLHDPNIDVFLEPLDVSQLDNEVQF 255

Query: 181 PSGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 230
           P GLQFYEP+G CSSHD VRENV+NPESFF+EFPADI + IE   SSPEN
Sbjct: 256 PFGLQFYEPMGRCSSHDVVRENVENPESFFNEFPADILDQIELLSSSPEN 305

[Close]

BLAST of IVF0000853 vs. ExPASy TrEMBL
Match: A0A6J1I9W2 (transcription factor DUO1-like OS=Cucurbita maxima OX=3661 GN=LOC111472488 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.0e-93
Identity = 178/230 (77.39%), Postives = 194/230 (84.35%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 60
           +VIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQ S  PSKLQRS +KE 
Sbjct: 76  IVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQNSTTPSKLQRSTRKEK 135

Query: 61  PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 120
           PVDFD+P+MEAPKLSSAS+G++SSRPM C SS  AD  E V+MFCSLPD Y PKLLGFGQ
Sbjct: 136 PVDFDVPSMEAPKLSSASDGDASSRPMSCSSSFSADNAEAVDMFCSLPDLYRPKLLGFGQ 195

Query: 121 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQG-LHDPNFDVFLETLDVSQLTNEVQF 180
           DFLQPEFN F  +IK + Q+NFH   L STFSSQG LHDPN D+FLE LDVSQL NEVQF
Sbjct: 196 DFLQPEFNPFPITIKSDPQTNFHPLPLGSTFSSQGLLHDPNIDIFLEPLDVSQLDNEVQF 255

Query: 181 PSGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 230
           P GLQFYEP+G CSSHD V ENV+NPESFF+EFPADI + IE   SSPEN
Sbjct: 256 PFGLQFYEPMGRCSSHDVVSENVENPESFFNEFPADILDQIELLSSSPEN 305

[Close]

BLAST of IVF0000853 vs. NCBI nr
Match: XP_008459792.1 (PREDICTED: myb-related protein 308-like [Cucumis melo] >KAA0039783.1 myb-related protein 308-like protein [Cucumis melo var. makuwa] >TYK24714.1 myb-related protein 308-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 465 bits (1197), Expect = 3.33e-164
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 60
           MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET
Sbjct: 78  MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 137

Query: 61  PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 120
           PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ
Sbjct: 138 PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 197

Query: 121 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP 180
           DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP
Sbjct: 198 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP 257

Query: 181 SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 229
           SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN
Sbjct: 258 SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 306

[Close]

BLAST of IVF0000853 vs. NCBI nr
Match: XP_004140627.1 (transcription factor DUO1 [Cucumis sativus] >KAE8646779.1 hypothetical protein Csa_005426 [Cucumis sativus])

HSP 1 Score: 407 bits (1045), Expect = 3.94e-141
Identity = 207/229 (90.39%), Postives = 214/229 (93.45%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 60
           MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKE 
Sbjct: 78  MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKEK 137

Query: 61  PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 120
           P+DFDIP+MEAPKLSSASEGESS RPM CLSSC A+ VEP+NMFCS+PD Y PKLLGFGQ
Sbjct: 138 PIDFDIPSMEAPKLSSASEGESSLRPMSCLSSCCAENVEPLNMFCSVPDPYSPKLLGFGQ 197

Query: 121 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP 180
           DFLQPEFNS    IKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP
Sbjct: 198 DFLQPEFNS----IKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFP 257

Query: 181 SGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 229
           SGLQFYEP+ CCSSHD VRENVDNPESFFSEFPADIFE +EP PSSPEN
Sbjct: 258 SGLQFYEPMECCSSHDVVRENVDNPESFFSEFPADIFE-LEPLPSSPEN 301

[Close]

BLAST of IVF0000853 vs. NCBI nr
Match: XP_038906714.1 (transcription factor DUO1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 393 bits (1009), Expect = 2.43e-136
Identity = 199/234 (85.04%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 60
           +VIELQAQ GNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTS APSKLQRSAKKE 
Sbjct: 23  VVIELQAQLGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSTAPSKLQRSAKKEK 82

Query: 61  PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 120
           PV FD+P+MEAPKLSSASEGESSSRPM C SSC AD  E VNMFCSLPD Y PKL GFGQ
Sbjct: 83  PVHFDVPSMEAPKLSSASEGESSSRPMSCSSSCCADNAEAVNMFCSLPDLYSPKLFGFGQ 142

Query: 121 DFLQPEFNSFQTSIKFEQQS-----NFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTN 180
           DFLQPEFNSFQT+IK E Q+     NFH Q LSSTFSSQGLHDPNFDVFLE LDVSQL N
Sbjct: 143 DFLQPEFNSFQTTIKSEPQTSYPSTNFHKQPLSSTFSSQGLHDPNFDVFLEALDVSQLNN 202

Query: 181 EVQFPSGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 229
           EVQFP GLQFYEP+GCCSSHD VRENVDNPESFFSEFPADIF+HIEP PSSP+N
Sbjct: 203 EVQFPFGLQFYEPMGCCSSHDVVRENVDNPESFFSEFPADIFDHIEPLPSSPDN 256

[Close]

BLAST of IVF0000853 vs. NCBI nr
Match: XP_038906713.1 (transcription factor DUO1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 393 bits (1009), Expect = 1.58e-135
Identity = 199/234 (85.04%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 60
           +VIELQAQ GNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTS APSKLQRSAKKE 
Sbjct: 76  VVIELQAQLGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSTAPSKLQRSAKKEK 135

Query: 61  PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 120
           PV FD+P+MEAPKLSSASEGESSSRPM C SSC AD  E VNMFCSLPD Y PKL GFGQ
Sbjct: 136 PVHFDVPSMEAPKLSSASEGESSSRPMSCSSSCCADNAEAVNMFCSLPDLYSPKLFGFGQ 195

Query: 121 DFLQPEFNSFQTSIKFEQQS-----NFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTN 180
           DFLQPEFNSFQT+IK E Q+     NFH Q LSSTFSSQGLHDPNFDVFLE LDVSQL N
Sbjct: 196 DFLQPEFNSFQTTIKSEPQTSYPSTNFHKQPLSSTFSSQGLHDPNFDVFLEALDVSQLNN 255

Query: 181 EVQFPSGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 229
           EVQFP GLQFYEP+GCCSSHD VRENVDNPESFFSEFPADIF+HIEP PSSP+N
Sbjct: 256 EVQFPFGLQFYEPMGCCSSHDVVRENVDNPESFFSEFPADIFDHIEPLPSSPDN 309

[Close]

BLAST of IVF0000853 vs. NCBI nr
Match: XP_022933030.1 (transcription factor DUO1-like [Cucurbita moschata])

HSP 1 Score: 352 bits (902), Expect = 2.60e-119
Identity = 180/230 (78.26%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKET 60
           +VIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQ S  PSKLQRS +KE 
Sbjct: 76  VVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQNSTTPSKLQRSTRKEK 135

Query: 61  PVDFDIPTMEAPKLSSASEGESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQ 120
           PVDFD+P+MEAPKLSSAS+G++SSRPM C SS  AD  E V+MFCSLPD Y PKLLGFGQ
Sbjct: 136 PVDFDVPSMEAPKLSSASDGDASSRPMSCSSSFSADNAEAVDMFCSLPDLYRPKLLGFGQ 195

Query: 121 DFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGL-HDPNFDVFLETLDVSQLTNEVQF 180
           DFLQPEFN F  +IK + Q+NFH   L STFSSQGL HDPN DVFLE LDVSQL NEVQF
Sbjct: 196 DFLQPEFNPFPITIKSDPQTNFHPLPLGSTFSSQGLLHDPNIDVFLEPLDVSQLDNEVQF 255

Query: 181 PSGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPSSPEN 229
           P GLQFYEP+G CSSHD VRENV+NPESFF+EFPADI + IE   SSPEN
Sbjct: 256 PFGLQFYEPMGRCSSHDVVRENVENPESFFNEFPADILDQIELLSSSPEN 305

[Close]

BLAST of IVF0000853 vs. TAIR 10
Match: AT3G60460.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 95.5 bits (236), Expect = 5.9e-20
Identity = 79/232 (34.05%), Postives = 110/232 (47.41%), Query Frame = 0


Query: 2   VIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKETP 61
           VIELQ++FGNKWA+IATYLPGRTDNDVKNFWSSRQKRLAR+L  S   S    + K  + 
Sbjct: 75  VIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLARILHNSSDASSSSFNPKSSSS 134

Query: 62  VDFDIPTMEAPKLSSASEG--------ESSSRPMLCLSSCRADYVEPVNMFCSLPDSYCP 121
                  ++  + SS   G         SS   M+  SS +    + V     L      
Sbjct: 135 HRLKGKNVKPIRQSSQGFGLVEEEVTVSSSCSQMVPYSSDQVG--DEVLRLPDLGVKLEH 194

Query: 122 KLLGFGQDFLQPEFNSFQTSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQL 181
           +   FG D +  E++  Q     +  S F  +S         L DP +   L   D    
Sbjct: 195 QPFAFGTDLVLAEYSDSQNDANQQAISPFSPESRELL---ARLDDPFYYDILGPAD---- 254

Query: 182 TNEVQFPSGLQFYEPIGCCSSHDDVRENVDNPESFFSEFPADIFEHIEPPPS 226
           ++E  F     F+EP         V ++ +  + F  +FPAD+F+ ++P PS
Sbjct: 255 SSEPLFALPQPFFEPSPVPRRCRHVSKD-EEADVFLDDFPADMFDQVDPIPS 296

[Close]

BLAST of IVF0000853 vs. TAIR 10
Match: AT2G26960.1 (myb domain protein 81 )

HSP 1 Score: 65.1 bits (157), Expect = 8.5e-11
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 2   VIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARL 43
           VIEL A  GNKWA++A  LPGRTDN++KNFW++R KRL RL
Sbjct: 86  VIELHALLGNKWARMAEELPGRTDNEIKNFWNTRLKRLQRL 126

[Close]

BLAST of IVF0000853 vs. TAIR 10
Match: AT5G55020.1 (myb domain protein 120 )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 25/41 (60.98%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLAR 42
           ++I+L AQ GNKWA++A  LPGRTDN++KN+W++R KRL R
Sbjct: 91  LIIQLHAQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRLLR 131

[Close]

BLAST of IVF0000853 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 )

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-10
Identity = 23/43 (53.49%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLL 44
           +++EL +++GN+W+KI+ YLPGRTDND+KN+W +R ++ AR L
Sbjct: 83  LILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQL 125

[Close]

BLAST of IVF0000853 vs. TAIR 10
Match: AT1G25340.2 (myb domain protein 116 )

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-10
Identity = 23/43 (53.49%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1   MVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLL 44
           +++EL +++GN+W+KI+ YLPGRTDND+KN+W +R ++ AR L
Sbjct: 78  LILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQL 120

The following BLAST results are available for this feature:

BLAST of IVF0000853 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A178VEK7	8.2e-19	34.05	Transcription factor DUO1 OS=Arabidopsis thaliana OX=3702 GN=DUO1 PE=1 SV=1	[more]
Q0JB89	1.5e-15	57.47	Probable transcription factor MYB58 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q94FL7	1.6e-09	60.98	Transcription factor MYB120 OS=Arabidopsis thaliana OX=3702 GN=MYB120 PE=2 SV=1	[more]
L7R9Z0	2.0e-09	45.76	MYB-like transcription factor EOBI OS=Petunia hybrida OX=4102 GN=EOBI PE=2 SV=1	[more]
B3VTV7	3.5e-09	53.06	Transcription factor MYB60 OS=Vitis vinifera OX=29760 GN=MYB60 PE=2 SV=1	[more]

BLAST of IVF0000853 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T9S7	3.8e-128	100.00	Myb-related protein 308-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CB01	3.8e-128	100.00	myb-related protein 308-like OS=Cucumis melo OX=3656 GN=LOC103498816 PE=4 SV=1	[more]
A0A0A0KFL9	9.5e-111	90.39	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G10516...	[more]
A0A6J1F3T0	6.2e-94	78.26	transcription factor DUO1-like OS=Cucurbita moschata OX=3662 GN=LOC111439723 PE=...	[more]
A0A6J1I9W2	4.0e-93	77.39	transcription factor DUO1-like OS=Cucurbita maxima OX=3661 GN=LOC111472488 PE=4 ...	[more]

BLAST of IVF0000853 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459792.1	3.33e-164	100.00	PREDICTED: myb-related protein 308-like [Cucumis melo] >KAA0039783.1 myb-related...	[more]
XP_004140627.1	3.94e-141	90.39	transcription factor DUO1 [Cucumis sativus] >KAE8646779.1 hypothetical protein C...	[more]
XP_038906714.1	2.43e-136	85.04	transcription factor DUO1-like isoform X2 [Benincasa hispida]	[more]
XP_038906713.1	1.58e-135	85.04	transcription factor DUO1-like isoform X1 [Benincasa hispida]	[more]
XP_022933030.1	2.60e-119	78.26	transcription factor DUO1-like [Cucurbita moschata]	[more]

BLAST of IVF0000853 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60460.1	5.9e-20	34.05	myb-like HTH transcriptional regulator family protein	[more]
AT2G26960.1	8.5e-11	68.29	myb domain protein 81	[more]
AT5G55020.1	1.1e-10	60.98	myb domain protein 120	[more]
AT1G25340.1	3.2e-10	53.49	myb domain protein 116	[more]
AT1G25340.2	3.2e-10	53.49	myb domain protein 116	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 1..63 e-value: 4.1E-14 score: 54.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..84
None	No IPR available	PANTHER	PTHR47996:SF3	TRANSCRIPTION FACTOR DUO1	coord: 1..228
None	No IPR available	PANTHER	PTHR47996	TRANSCRIPTION FACTOR DUO1	coord: 1..228
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 3..32 e-value: 3.5E-8 score: 33.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..40 score: 18.672209
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..36 score: 6.829499
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 1..32 e-value: 5.23448E-8 score: 46.0294
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 3..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000853.1	IVF0000853.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044839	cell cycle G2/M phase transition
biological_process	GO:0055047	generative cell mitosis
biological_process	GO:0048235	pollen sperm cell differentiation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0048555	generative cell nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding