IVF0000846 (gene) Melon (IVF77) v1

Overview
NameIVF0000846
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGibberellin 2-beta-dioxygenase 8-like
Locationchr11: 5695290 .. 5695677 (+)
RNA-Seq ExpressionIVF0000846
SyntenyIVF0000846
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCAAATAGGGTTAAAAAGAAGCTTGACGGCTCAAACGGCTCAGTTGGAGAGGAGAAATTGGTTAGCGGCTCGACTGAGGAAGAAGGCGGCTCGGGTGGACGCAGTCATGGCTCGGTTAGGGTTAGCTCAAGGCGAGCGGCGCGGGTAGGCGCACGCGTGGCTTGCACTTCACGCGACGGGTGGTGCGGCTCAGGGTGGAAGTCAACGGCGCTCAGCTTGACGCGGCTGACGGAGAACGTCTCGGATTGAGACGACTTGCAATAACCAGCGGCGCTCGACTGAGAAAAATAACTCGCAGCGCTCGGGTGCACGACGATCTCCAACGTGGCTGGGGTGGAGCTCCAACGACGGCTGATGGATGGCTCGACGTGATGGTCGACTGA

mRNA sequence

ATGGGTCAAATAGGGTTAAAAAGAAGCTTGACGGCTCAAACGGCTCAGTTGGAGAGGAGAAATTGGTTAGCGGCTCGACTGAGGAAGAAGGCGGCTCGGGTGGACGCAGTCATGGCTCGGTTAGGGTTAGCTCAAGGCGAGCGGCGCGGGGTGGAAGTCAACGGCGCTCAGCTTGACGCGGCTGACGGAGAACGTCTCGGATTGAGACGACTTGCAATAACCAGCGGCGCTCGACTGAGAAAAATAACTCGCAGCGCTCGGGTGCACGACGATCTCCAACGTGGCTGGGGTGGAGCTCCAACGACGGCTGATGGATGGCTCGACGTGATGGTCGACTGA

Coding sequence (CDS)

ATGGGTCAAATAGGGTTAAAAAGAAGCTTGACGGCTCAAACGGCTCAGTTGGAGAGGAGAAATTGGTTAGCGGCTCGACTGAGGAAGAAGGCGGCTCGGGTGGACGCAGTCATGGCTCGGTTAGGGTTAGCTCAAGGCGAGCGGCGCGGGGTGGAAGTCAACGGCGCTCAGCTTGACGCGGCTGACGGAGAACGTCTCGGATTGAGACGACTTGCAATAACCAGCGGCGCTCGACTGAGAAAAATAACTCGCAGCGCTCGGGTGCACGACGATCTCCAACGTGGCTGGGGTGGAGCTCCAACGACGGCTGATGGATGGCTCGACGTGATGGTCGACTGA

Protein sequence

MGQIGLKRSLTAQTAQLERRNWLAARLRKKAARVDAVMARLGLAQGERRGVEVNGAQLDAADGERLGLRRLAITSGARLRKITRSARVHDDLQRGWGGAPTTADGWLDVMVD
Homology
[Close]
BLAST of IVF0000846 vs. ExPASy TrEMBL
Match: A0A5D3BIM3 (Gibberellin 2-beta-dioxygenase 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold401G00020 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.3e-07
Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 64  ERLGLRRLAITSGARLRKITRSARVHDDLQRGWGGAPTTADGWLDVMVD 113
           +R GLRR A ++G    KITR ARV  DL+RGWGGAPTTADG LDVMVD
Sbjct: 83  DRDGLRRSARSTGG---KITRGARVCGDLRRGWGGAPTTADGRLDVMVD 128

[Close]
BLAST of IVF0000846 vs. ExPASy TrEMBL
Match: A0A5A7VHJ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G001240 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.4e-05
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 0 

Query: 64  ERLGLRRLAITSGARLRKITRSARVHDDLQRGWGGAPTTADGWLDVMVD 113
           +R GLR  A ++G    KIT  ARV  DL+RGWGGAPTTADG LDVMVD
Sbjct: 183 DRDGLRWSARSTGG---KITLGARVCGDLRRGWGGAPTTADGRLDVMVD 228

[Close]
BLAST of IVF0000846 vs. NCBI nr
Match: TYJ98038.1 (gibberellin 2-beta-dioxygenase 8-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 4.36e-10
Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 64  ERLGLRRLAITSGARLRKITRSARVHDDLQRGWGGAPTTADGWLDVMVD 112
           +R GLRR A ++G    KITR ARV  DL+RGWGGAPTTADG LDVMVD
Sbjct: 83  DRDGLRRSARSTGG---KITRGARVCGDLRRGWGGAPTTADGRLDVMVD 128

[Close]
BLAST of IVF0000846 vs. NCBI nr
Match: KAA0066557.1 (hypothetical protein E6C27_scaffold25G001240 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 3.36e-07
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 0 

Query: 64  ERLGLRRLAITSGARLRKITRSARVHDDLQRGWGGAPTTADGWLDVMVD 112
           +R GLR  A ++G    KIT  ARV  DL+RGWGGAPTTADG LDVMVD
Sbjct: 183 DRDGLRWSARSTGG---KITLGARVCGDLRRGWGGAPTTADGRLDVMVD 228

The following BLAST results are available for this feature:
BLAST of IVF0000846 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0000846 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BIM36.3e-0769.39Gibberellin 2-beta-dioxygenase 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5A7VHJ43.4e-0565.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of IVF0000846 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ98038.14.36e-1069.39gibberellin 2-beta-dioxygenase 8-like [Cucumis melo var. makuwa][more]
KAA0066557.13.36e-0765.31hypothetical protein E6C27_scaffold25G001240 [Cucumis melo var. makuwa][more]
BLAST of IVF0000846 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0000846.1IVF0000846.1mRNA