IVF0000845 (gene) Melon (IVF77) v1

Overview


Name	IVF0000845
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Alba domain-containing protein
Location	tig00000135: 1251246 .. 1252601 (-)
RNA-Seq Expression	IVF0000845
Synteny	IVF0000845

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAATTTTCCATCGCTTTCATTTCTTAAGGGGCGCACCCGTCACCGGAAAACGCAGTAACTGCCGGTGAACGGATGCTAAACGATACCGTTGATACCTTAACCGCTCAAACGTCTCCGTCGTAACAAAAATTGCCTCCGCCAGCTTCTGATTTCCTTCACATTCTTTATAAATTACTCCTGCAGTTCGATTCATTTTATCAAGTTCACAATTAGAAGTAGAATCTTTTCATTCCTTCTTCGAGATTAGGCAATGGATTCAGGCACGGTCGTTTCAGAAGCCACCCCTGAGGTCAAGAATGAAATCCAAAATGAGGAAGAAAAGCTCCTCGTCACTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCCTTCTTTTACTACTACAATCTTTCTAAGGTATTCTTATTCCTGAAGGTCTTCTGTTGAATCAACTTCTTAGTTAAGGTTTCAAAATCATGATTGCTTTGATGTTTTAATATGTTGCAGAGGCACATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGGTATGAGTTCTTGAATCCTTTTTTTTTTTTTCATAATTGGTTATAGTTGGATGTTCATTACTGGGATGAGTTCCATTCATTCGTTCATTGTACAGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAACGGGTTGGCATTTCAAAAGAGTAAGAAATTTTTTCCAACCTATTGGCAATTTTAATTAGTTTCTTTTTTTTGGTGAGTAAGGCACTCTCTAAACATGATCTATTATTTGGAAATTTCTGCAGATTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAACGGCAAGCTGGTTATGAAACCTAAGGTTACTGCTTACTAATGGAAATTATGTCTGATCTATTGTGCAATTTTTAGATGTTTCGTTGGCTTAATGATGTATTCTTTTATCTGTTTTCCTAGATTGAGATTGCATTGGTAAATGCAGAAAAGATCAAGAACATTTCGACTGCTCCAACCAGTGAAGATTCTTGAAACAAATTTTGTTAGTAGTGAAGTATCATTCTCGAATCTGGCTTTACTTCTTGTTTGCCTACTTTGCCCAAAGTTTCTATAAGAGATTAGGGATCTGCTAGGAACTAGGAGAGTGAATTGCAGATCTTTTAGTCGAAGCAGATTCAATTCTGATAGAACCTAAAGAGAGGAGTTCCTTTTCTTCTCCCAGTGAGATTCTTAAGGATTGGATGTAGAGAAGCTTTATTTGTAATTGAACTACCAACTTCTAATTGCATATAAAATTGGATAAA

mRNA sequence

ATTAATTTTCCATCGCTTTCATTTCTTAAGGGGCGCACCCGTCACCGGAAAACGCAGTAACTGCCGGTGAACGGATGCTAAACGATACCGTTGATACCTTAACCGCTCAAACGTCTCCGTCGTAACAAAAATTGCCTCCGCCAGCTTCTGATTTCCTTCACATTCTTTATAAATTACTCCTGCAGTTCGATTCATTTTATCAAGTTCACAATTAGAAGTAGAATCTTTTCATTCCTTCTTCGAGATTAGGCAATGGATTCAGGCACGGTCGTTTCAGAAGCCACCCCTGAGGTCAAGAATGAAATCCAAAATGAGGAAGAAAAGCTCCTCGTCACTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCCTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAACGGGTTGGCATTTCAAAAGAATTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAACGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAATGCAGAAAAGATCAAGAACATTTCGACTGCTCCAACCAGTGAAGATTCTTGAAACAAATTTTGTTAGTAGTGAAGTATCATTCTCGAATCTGGCTTTACTTCTTGTTTGCCTACTTTGCCCAAAGTTTCTATAAGAGATTAGGGATCTGCTAGGAACTAGGAGAGTGAATTGCAGATCTTTTAGTCGAAGCAGATTCAATTCTGATAGAACCTAAAGAGAGGAGTTCCTTTTCTTCTCCCAGTGAGATTCTTAAGGATTGGATGTAGAGAAGCTTTATTTGTAATTGAACTACCAACTTCTAATTGCATATAAAATTGGATAAA

Coding sequence (CDS)

ATGGATTCAGGCACGGTCGTTTCAGAAGCCACCCCTGAGGTCAAGAATGAAATCCAAAATGAGGAAGAAAAGCTCCTCGTCACTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCCTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAACGGGTTGGCATTTCAAAAGAATTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAACGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAATGCAGAAAAGATCAAGAACATTTCGACTGCTCCAACCAGTGAAGATTCTTGA

Protein sequence

MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

Homology

[Close]

BLAST of IVF0000845 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.2e-24
Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 45  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 104
           +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +K
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEK 77

Query: 105 NLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSE 148
            +  S+V +K+   G+ V K KIEI LV +EK   +  A   E
Sbjct: 78  KIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

[Close]

BLAST of IVF0000845 vs. ExPASy TrEMBL
Match: A0A5D3CZ81 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001140 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.8e-71
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 150
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of IVF0000845 vs. ExPASy TrEMBL
Match: A0A1S3AXD3 (uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103483640 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.8e-71
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 150
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of IVF0000845 vs. ExPASy TrEMBL
Match: A0A0A0L8F8 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G142990 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.2e-67
Identity = 142/149 (95.30%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           MDSG VVSEA PEVKNEI+NEEE+LLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK L ISSVSLKNGENGK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 150
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of IVF0000845 vs. ExPASy TrEMBL
Match: A0A6J1IXN8 (uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC111480105 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61
Identity = 133/149 (89.26%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           M+SG VVSEAT EVKNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEATSEVKNEIRNEEEKLLVVAPDVEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK LTISSVSLKNGEN +
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 150
           LVMKPKIEIAL+NAEK+K ISTA TSEDS
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of IVF0000845 vs. ExPASy TrEMBL
Match: A0A6J1EFH1 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111432040 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60
Identity = 131/149 (87.92%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           M+SG VVSEA  E+KNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK LTISSVSLKNGEN +
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 150
           LVMKPKIEIAL+NAEK+K ISTA TSEDS
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of IVF0000845 vs. NCBI nr
Match: XP_008438573.1 (PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0049297.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa] >TYK17261.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 279 bits (714), Expect = 2.06e-94
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of IVF0000845 vs. NCBI nr
Match: XP_004134424.1 (uncharacterized protein At2g34160 [Cucumis sativus] >KGN56907.1 hypothetical protein Csa_011451 [Cucumis sativus])

HSP 1 Score: 266 bits (679), Expect = 4.47e-89
Identity = 142/149 (95.30%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           MDSG VVSEA PEVKNEI+NEEE+LLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK L ISSVSLKNGENGK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of IVF0000845 vs. NCBI nr
Match: XP_038877187.1 (uncharacterized protein At2g34160-like [Benincasa hispida])

HSP 1 Score: 256 bits (654), Expect = 2.90e-85
Identity = 138/149 (92.62%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           M+SG VVSE TPEVKNEI++EEEKLLV A D EVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEGTPEVKNEIRSEEEKLLVVANDGEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK LTISSVSLK GEN K
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKTLTISSVSLKKGENDK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of IVF0000845 vs. NCBI nr
Match: XP_022980835.1 (uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 247 bits (630), Expect = 1.32e-81
Identity = 133/149 (89.26%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           M+SG VVSEAT EVKNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEATSEVKNEIRNEEEKLLVVAPDVEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK LTISSVSLKNGEN +
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIAL+NAEK+K ISTA TSEDS
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of IVF0000845 vs. NCBI nr
Match: XP_022924600.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023528324.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244 bits (623), Expect = 1.54e-80
Identity = 131/149 (87.92%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           M+SG VVSEA  E+KNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK LTISSVSLKNGEN +
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIAL+NAEK+K ISTA TSEDS
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of IVF0000845 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25
Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 45  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 104
           +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +K
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEK 77

Query: 105 NLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSE 148
            +  S+V +K+   G+ V K KIEI LV +EK   +  A   E
Sbjct: 78  KIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

[Close]

BLAST of IVF0000845 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25
Identity = 63/118 (53.39%), Postives = 84/118 (71.19%), Query Frame = 0


Query: 23  EKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALG 82
           E+ +V AP +      V T    K+N+IQVSN KKP F+Y NL+KR+I+Q+NEVELSALG
Sbjct: 16  ERNIVLAPATTTTTATVETH---KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALG 75

Query: 83  MAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNI 141
           MAI TVVTI+EILK NGLA +K +  S+V +K+   GK+V K KIEI L  ++K  ++
Sbjct: 76  MAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSL 130

[Close]

BLAST of IVF0000845 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 110.9 bits (276), Expect = 8.8e-25
Identity = 56/103 (54.37%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 45  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 104
           +K+N+IQVSN KKP F+Y NL+KR+++QY +VELSALGMAI TVVT+AEILK NG A +K
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGFAVEK 77

Query: 105 NLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSE 148
            +  S+V +K+   G+ V K KIEI L  +EK   +  A   E
Sbjct: 78  KIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEE 120

The following BLAST results are available for this feature:

BLAST of IVF0000845 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	3.2e-24	55.34	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of IVF0000845 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZ81	2.8e-71	100.00	Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AXD3	2.8e-71	100.00	uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103483640 P...	[more]
A0A0A0L8F8	3.2e-67	95.30	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G142990 PE=4 S...	[more]
A0A6J1IXN8	1.5e-61	89.26	uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC1114801...	[more]
A0A6J1EFH1	1.0e-60	87.92	uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of IVF0000845 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438573.1	2.06e-94	100.00	PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0049297.1 a...	[more]
XP_004134424.1	4.47e-89	95.30	uncharacterized protein At2g34160 [Cucumis sativus] >KGN56907.1 hypothetical pro...	[more]
XP_038877187.1	2.90e-85	92.62	uncharacterized protein At2g34160-like [Benincasa hispida]	[more]
XP_022980835.1	1.32e-81	89.26	uncharacterized protein At2g34160-like [Cucurbita maxima]	[more]
XP_022924600.1	1.54e-80	87.92	uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023528324.1 unch...	[more]

BLAST of IVF0000845 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34160.1	2.3e-25	55.34	Alba DNA/RNA-binding protein	[more]
AT3G04620.1	2.3e-25	53.39	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	8.8e-25	54.37	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 46..149 e-value: 2.5E-36 score: 126.1
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 48..137
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 48..105 e-value: 4.7E-11 score: 42.3
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 10..146
None	No IPR available	PANTHER	PTHR31947:SF19	ALBA DNA/RNA-BINDING PROTEIN	coord: 10..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000845.1	IVF0000845.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding