IVF0000782 (gene) Melon (IVF77) v1

Overview
NameIVF0000782
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr07: 4693235 .. 4693618 (+)
RNA-Seq ExpressionIVF0000782
SyntenyIVF0000782
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTACGGTTGTGACCGGTGGTTCTCGTAGAATCTTTGAGCATTGTCATAAATTTATTTTATCGCACAAGAAATTTTGCTATTTCCACGACGACGACATACGAACTCCGGCGACCGACGCCTTGACGACATTACCCACACTGCAAACGCCCGCATTTGAGATGCGTTCCCTCCCCGGGCCACGCGCGACACCCACGCTGATACATGCTGAGCTTTCTACTCCGGTGATTACTCGCCAACAGGTTTTGACTCACAAATCTGATTTGCATCGCGAGCACGGCTTCACATCATCAGCGTTCTTGGTTGCGAGTTGCAAATTTCAAATCGACGAACAGAGAAGGCGTTGTTTCGTCTCTAGAGAGTTCGACAAAGTTCAGTTCTAG

mRNA sequence

ATGATTACGGTTGTGACCGGTGGTTCTCGTAGAATCTTTGAGCATTGTCATAAATTTATTTTATCGCACAAGAAATTTTGCTATTTCCACGACGACGACATACGAACTCCGGCGACCGACGCCTTGACGACATTACCCACACTGCAAACGCCCGCATTTGAGATGCGTTCCCTCCCCGGGCCACGCGCGACACCCACGCTGATACATGCTGAGCTTTCTACTCCGGTGATTACTCGCCAACAGGTTTTGACTCACAAATCTGATTTGCATCGCGAGCACGGCTTCACATCATCAGCGTTCTTGGTTGCGAGTTGCAAATTTCAAATCGACGAACAGAGAAGGCGTTGTTTCGTCTCTAGAGAGTTCGACAAAGTTCAGTTCTAG

Coding sequence (CDS)

ATGATTACGGTTGTGACCGGTGGTTCTCGTAGAATCTTTGAGCATTGTCATAAATTTATTTTATCGCACAAGAAATTTTGCTATTTCCACGACGACGACATACGAACTCCGGCGACCGACGCCTTGACGACATTACCCACACTGCAAACGCCCGCATTTGAGATGCGTTCCCTCCCCGGGCCACGCGCGACACCCACGCTGATACATGCTGAGCTTTCTACTCCGGTGATTACTCGCCAACAGGTTTTGACTCACAAATCTGATTTGCATCGCGAGCACGGCTTCACATCATCAGCGTTCTTGGTTGCGAGTTGCAAATTTCAAATCGACGAACAGAGAAGGCGTTGTTTCGTCTCTAGAGAGTTCGACAAAGTTCAGTTCTAG

Protein sequence

MITVVTGGSRRIFEHCHKFILSHKKFCYFHDDDIRTPATDALTTLPTLQTPAFEMRSLPGPRATPTLIHAELSTPVITRQQVLTHKSDLHREHGFTSSAFLVASCKFQIDEQRRRCFVSREFDKVQF
Homology
[Close]
BLAST of IVF0000782 vs. ExPASy TrEMBL
Match: A0A5D3DW78 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003290 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.7e-67
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MITVVTGGSRRIFEHCHKFILSHKKFCYFHDDDIRTPATDALTTLPTLQTPAFEMRSLPG 60
           MITVVTGGSRRIFEHCHKFILSHKKFCYFHDDDIRTPATDALTTLPTLQTPAFEMRSLPG
Sbjct: 1   MITVVTGGSRRIFEHCHKFILSHKKFCYFHDDDIRTPATDALTTLPTLQTPAFEMRSLPG 60

Query: 61  PRATPTLIHAELSTPVITRQQVLTHKSDLHREHGFTSSAFLVASCKFQIDEQRRRCFVSR 120
           PRATPTLIHAELSTPVITRQQVLTHKSDLHREHGFTSSAFLVASCKFQIDEQRRRCFVSR
Sbjct: 61  PRATPTLIHAELSTPVITRQQVLTHKSDLHREHGFTSSAFLVASCKFQIDEQRRRCFVSR 120

Query: 121 EFDKVQF 128
           EFDKVQF
Sbjct: 121 EFDKVQF 127

[Close]
BLAST of IVF0000782 vs. ExPASy TrEMBL
Match: A0A0A0KZ81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617370 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.3e-13
Identity = 48/74 (64.86%), Postives = 52/74 (70.27%), Query Frame = 0 

Query: 55  MRSLPGPRATPTLIHAELSTPVITRQQVLTHKSDLHREHGFTSSAFL-VASCK--FQIDE 114
           MRSLPGPRATPT I A   +PVI  QQVLTHKSDLH E  F     + V  CK  FQ  E
Sbjct: 1   MRSLPGPRATPTQIDAVRYSPVINCQQVLTHKSDLHLEPDFERLRIISVLGCKLQFQARE 60

Query: 115 QRRRCFVSREFDKV 126
           QRRRCFVS+EFDK+
Sbjct: 61  QRRRCFVSKEFDKL 74

[Close]
BLAST of IVF0000782 vs. NCBI nr
Match: KAA0063364.1 (hypothetical protein E6C27_scaffold1505G00390 [Cucumis melo var. makuwa] >TYK28067.1 hypothetical protein E5676_scaffold384G003290 [Cucumis melo var. makuwa])

HSP 1 Score: 262 bits (670), Expect = 2.04e-88
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MITVVTGGSRRIFEHCHKFILSHKKFCYFHDDDIRTPATDALTTLPTLQTPAFEMRSLPG 60
           MITVVTGGSRRIFEHCHKFILSHKKFCYFHDDDIRTPATDALTTLPTLQTPAFEMRSLPG
Sbjct: 1   MITVVTGGSRRIFEHCHKFILSHKKFCYFHDDDIRTPATDALTTLPTLQTPAFEMRSLPG 60

Query: 61  PRATPTLIHAELSTPVITRQQVLTHKSDLHREHGFTSSAFLVASCKFQIDEQRRRCFVSR 120
           PRATPTLIHAELSTPVITRQQVLTHKSDLHREHGFTSSAFLVASCKFQIDEQRRRCFVSR
Sbjct: 61  PRATPTLIHAELSTPVITRQQVLTHKSDLHREHGFTSSAFLVASCKFQIDEQRRRCFVSR 120

Query: 121 EFDKVQF 127
           EFDKVQF
Sbjct: 121 EFDKVQF 127

The following BLAST results are available for this feature:
BLAST of IVF0000782 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0000782 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DW784.7e-67100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KZ812.3e-1364.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617370 PE=4 SV=1[more]
BLAST of IVF0000782 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0063364.12.04e-88100.00hypothetical protein E6C27_scaffold1505G00390 [Cucumis melo var. makuwa] >TYK280... [more]
BLAST of IVF0000782 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0000782.1IVF0000782.1mRNA