IVF0000461 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCATTTTGATGGAGGTGGTGATGAGAAAGGAAAGGTCGGCAATGGCATGGTTGGTGGTGTGGTAGGAACTAAGGGAATTGTTGGTAATGGTGGCAAAGGAGGTAAGGTAGCCTTTGGCAAAGCTGGTGCTGAAGGCAATGGAGGCAGTGTAGCTCTTGGCAGGGTTGGCATCGGAGGGAGTGGAGGCAGAGCAGCGTTTGGCAGTGGTGGCACTGTGACCTTGGGCAGAGGCGGCAGTGGAGGAATTGGAGGTATAGATGGGAATGGAGGTGGAGCTGGTGGTGTATCAAGAAGGCGACGAGAACTAGCAAAGTTCACGTTGATGCTTGCCAATGACAAGGACGCGAATAATAATAACTTCAAGCAACTGTTGAAAGCAGCCATGGTCTTGAATTAG ATGGTTCATTTTGATGGAGGTGGTGATGAGAAAGGAAAGGTCGGCAATGGCATGGTTGGTGGTGTGGTAGGAACTAAGGGAATTGTTGGTAATGGTGGCAAAGGAGGTAAGGTAGCCTTTGGCAAAGCTGGTGCTGAAGGCAATGGAGGCAGTGTAGCTCTTGGCAGGGTTGGCATCGGAGGGAGTGGAGGCAGAGCAGCGTTTGGCAGTGGTGGCACTGTGACCTTGGGCAGAGGCGGCAGTGGAGGAATTGGAGGTATAGATGGGAATGGAGGTGGAGCTGGTGGTGTATCAAGAAGGCGACGAGAACTAGCAAAGTTCACGTTGATGCTTGCCAATGACAAGGACGCGAATAATAATAACTTCAAGCAACTGTTGAAAGCAGCCATGGTCTTGAATTAG ATGGTTCATTTTGATGGAGGTGGTGATGAGAAAGGAAAGGTCGGCAATGGCATGGTTGGTGGTGTGGTAGGAACTAAGGGAATTGTTGGTAATGGTGGCAAAGGAGGTAAGGTAGCCTTTGGCAAAGCTGGTGCTGAAGGCAATGGAGGCAGTGTAGCTCTTGGCAGGGTTGGCATCGGAGGGAGTGGAGGCAGAGCAGCGTTTGGCAGTGGTGGCACTGTGACCTTGGGCAGAGGCGGCAGTGGAGGAATTGGAGGTATAGATGGGAATGGAGGTGGAGCTGGTGGTGTATCAAGAAGGCGACGAGAACTAGCAAAGTTCACGTTGATGCTTGCCAATGACAAGGACGCGAATAATAATAACTTCAAGCAACTGTTGAAAGCAGCCATGGTCTTGAATTAG MVHFDGGGDEKGKVGNGMVGGVVGTKGIVGNGGKGGKVAFGKAGAEGNGGSVALGRVGIGGSGGRAAFGSGGTVTLGRGGSGGIGGIDGNGGGAGGVSRRRRELAKFTLMLANDKDANNNNFKQLLKAAMVLN Homology
BLAST of IVF0000461 vs. ExPASy Swiss-Prot
Match: Q79FB3 (PE-PGRS family protein PE_PGRS47 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=PE_PGRS47 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 8.8e-05 Identity = 44/90 (48.89%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of IVF0000461 vs. ExPASy Swiss-Prot
Match: B2HE92 (PE cleavage protein A OS=Mycobacterium marinum (strain ATCC BAA-535 / M) OX=216594 GN=pecA PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.7e-04 Identity = 45/96 (46.88%), Postives = 54/96 (56.25%), Query Frame = 0
BLAST of IVF0000461 vs. ExPASy TrEMBL
Match: A0A5D3CLF9 (Putative PE-PGRS family protein PE_PGRS46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003210 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 3.2e-58 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of IVF0000461 vs. ExPASy TrEMBL
Match: A0A1S3B3B8 (uncharacterized PE-PGRS family protein PE_PGRS46-like OS=Cucumis melo OX=3656 GN=LOC103485341 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 3.2e-58 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of IVF0000461 vs. ExPASy TrEMBL
Match: A0A0A0KLS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499075 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 9.3e-34 Identity = 92/106 (86.79%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of IVF0000461 vs. ExPASy TrEMBL
Match: A0A498HVN6 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_021242 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 5.3e-05 Identity = 61/136 (44.85%), Postives = 71/136 (52.21%), Query Frame = 0
BLAST of IVF0000461 vs. ExPASy TrEMBL
Match: A0A498KQ53 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_014438 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 7.7e-04 Identity = 60/135 (44.44%), Postives = 71/135 (52.59%), Query Frame = 0
BLAST of IVF0000461 vs. NCBI nr
Match: XP_008441114.1 (PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46-like [Cucumis melo] >KAA0036339.1 putative PE-PGRS family protein PE_PGRS46-like [Cucumis melo var. makuwa] >TYK12733.1 putative PE-PGRS family protein PE_PGRS46-like [Cucumis melo var. makuwa]) HSP 1 Score: 234 bits (596), Expect = 6.16e-77 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of IVF0000461 vs. NCBI nr
Match: KAE8647548.1 (hypothetical protein Csa_003491 [Cucumis sativus]) HSP 1 Score: 152 bits (384), Expect = 8.86e-45 Identity = 100/122 (81.97%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of IVF0000461 vs. NCBI nr
Match: RXH74062.1 (hypothetical protein DVH24_021242 [Malus domestica]) HSP 1 Score: 57.0 bits (136), Expect = 5.61e-07 Identity = 62/141 (43.97%), Postives = 73/141 (51.77%), Query Frame = 0
BLAST of IVF0000461 vs. NCBI nr
Match: WP_031699561.1 (hypothetical protein, partial [Mycobacterium tuberculosis]) HSP 1 Score: 53.5 bits (127), Expect = 3.68e-06 Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of IVF0000461 vs. NCBI nr
Match: WP_193693732.1 (PE-PGRS family protein [Mycobacterium tuberculosis] >CKM06699.1 Uncharacterised protein [Mycobacterium tuberculosis] >CLA12715.1 Uncharacterised protein [Mycobacterium tuberculosis]) HSP 1 Score: 53.5 bits (127), Expect = 5.91e-06 Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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