IVF0000448 (gene) Melon (IVF77) v1

Overview


Name	IVF0000448
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Methyltransferase FkbM family
Location	chr09: 22923676 .. 22923834 (+)
RNA-Seq Expression	IVF0000448
Synteny	IVF0000448

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCTTTGTTCGGTTTATTCGATTCCTTTGCTGCTCAAATCTTGTTCACCCCAGCAATACTTAACAATAACAATGGCGGAATCCATAGCGCACAATCAAGAAACGATGATGGAGAATCCAAGACCCAAGCGTCCACTCAACAACACAACCGCTAG

mRNA sequence

ATGAATTCTTTGTTCGGTTTATTCGATTCCTTTGCTGCTCAAATCTTGTTCACCCCAGCAATACTTAACAATAACAATGGCGGAATCCATAGCGCACAATCAAGAAACGATGATGGAGAATCCAAGACCCAAGCGTCCACTCAACAACACAACCGCTAG

Coding sequence (CDS)

ATGAATTCTTTGTTCGGTTTATTCGATTCCTTTGCTGCTCAAATCTTGTTCACCCCAGCAATACTTAACAATAACAATGGCGGAATCCATAGCGCACAATCAAGAAACGATGATGGAGAATCCAAGACCCAAGCGTCCACTCAACAACACAACCGCTAG

Protein sequence

MNSLFGLFDSFAAQILFTPAILNNNNGGIHSAQSRNDDGESKTQASTQQHNR

Homology

[Close]

BLAST of IVF0000448 vs. ExPASy TrEMBL
Match: A0A0A0KM86 (Methyltransferase FkbM family OS=Cucumis sativus OX=3659 GN=Csa_5G146920 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.7e-12
Identity = 40/52 (76.92%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 1  MNSLFGLFDSFAAQILFTPAILNNNNGGIHSAQSRNDDGESKTQASTQQHNR 53
          MNSLFGLFDSFAAQILF   +LN NNGG HS+QSR DDG+SKTQ  TQQ NR
Sbjct: 1  MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR 52

[Close]

BLAST of IVF0000448 vs. NCBI nr
Match: KGN49969.1 (hypothetical protein Csa_000477 [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 2.40e-17
Identity = 40/52 (76.92%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 1  MNSLFGLFDSFAAQILFTPAILNNNNGGIHSAQSRNDDGESKTQASTQQHNR 52
          MNSLFGLFDSFAAQILF   +LN NNGG HS+QSR DDG+SKTQ  TQQ NR
Sbjct: 1  MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR 52

The following BLAST results are available for this feature:

BLAST of IVF0000448 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0000448 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM86	6.7e-12	76.92	Methyltransferase FkbM family OS=Cucumis sativus OX=3659 GN=Csa_5G146920 PE=4 SV...	[more]

BLAST of IVF0000448 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49969.1	2.40e-17	76.92	hypothetical protein Csa_000477 [Cucumis sativus]	[more]

BLAST of IVF0000448 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000448.1	IVF0000448.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity