IVF0000409 (gene) Melon (IVF77) v1

Overview
NameIVF0000409
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr07: 1644058 .. 1645107 (+)
RNA-Seq ExpressionIVF0000409
SyntenyIVF0000409
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCTGATGTTGGCCTTTCAGGTTTACTCATTACTGCAACAATCTAACTTATATTCCTTAACTTACAATGTGAAATTGTAAATACTGCCTTGACGATCATGTTTGATGGCATCCTTCAATAGGTTTATGTCCTTTTTATTGTTATTTTTTAGAACACTTCCCTACTTTGAAAATATTTTACAAACAATTTTGTAATTTCAGCATAATTTGGGGTTTTTTATGTGCATTTTGTACTCTTTTTTATTCATTTTTTTTTAAAAAAGTGGTAGACTAAAAGTCTAAAAATCACTTTAGAATAAATTTTTTAGACCTACATTCAAGCATATTATTAAGAAAATGATTATCAATCTACCTAATTATTAAGAAAATAGAGTTTCGGATTTTTCTTTATCTTGTAAATAATTTCTATATCTTGCTATTTTTGAAATATTTCTTATTTCAAAAATAATTTGTTTTTAAAATCAAACATTTTGTTTTTTTTTCATTTTTGAACGATTTTTCGTTCATACTTGTTCATAAAGTTATTCTAAATGCACATCTTGGTTTGTTAATTTATAATCTTAATACCAGTAAAGCGTTACAATCATATTTGGACCTTTCTTAGTACTATAATTGTAAACGAAAATTAAAGATCACAAACAAAAAGAAATTTTAAAAAAATCCGTAACTTACCAAAAAAAAAAAGATGTCTAATTTATTTGGCCCAAAAAACAAGCCCAAGGGCTGATTCGGTAGGTAGATATCGTGTCATGTCTTGATTCGGCTTTCTCTTGCCTTGGGTAACAGGTATGTCACGCAAAACTTCCCCGTCTAGCCTTTGGCGAAATGGTTCGGCAGACCTATAACGTACAAAAGAAAACCGTTGAATGGAAGCCAAGGCTGCAGGACCCACTTGCATTCAACTTGTACAAGTGGGGATGCCTCATTGGCTCCTCCACCTACAACCCGGACGCCACGTCGGTTCCCGCGTTATTCCTCTTCAATAGTTATTTTTCTAACACAAAAGCACCGGCAACGGCATATTTTCCTTCGCCGCGACCCGCCTAG

mRNA sequence

ATGCAGCTGATGTTGGCCTTTCAGGTATGTCACGCAAAACTTCCCCGTCTAGCCTTTGGCGAAATGGTTCGGCAGACCTATAACGTACAAAAGAAAACCGTTGAATGGAAGCCAAGGCTGCAGGACCCACTTGCATTCAACTTGTACAAGTGGGGATGCCTCATTGGCTCCTCCACCTACAACCCGGACGCCACGTCGGTTCCCGCGTTATTCCTCTTCAATAGTTATTTTTCTAACACAAAAGCACCGGCAACGGCATATTTTCCTTCGCCGCGACCCGCCTAG

Coding sequence (CDS)

ATGCAGCTGATGTTGGCCTTTCAGGTATGTCACGCAAAACTTCCCCGTCTAGCCTTTGGCGAAATGGTTCGGCAGACCTATAACGTACAAAAGAAAACCGTTGAATGGAAGCCAAGGCTGCAGGACCCACTTGCATTCAACTTGTACAAGTGGGGATGCCTCATTGGCTCCTCCACCTACAACCCGGACGCCACGTCGGTTCCCGCGTTATTCCTCTTCAATAGTTATTTTTCTAACACAAAAGCACCGGCAACGGCATATTTTCCTTCGCCGCGACCCGCCTAG

Protein sequence

MQLMLAFQVCHAKLPRLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTYNPDATSVPALFLFNSYFSNTKAPATAYFPSPRPA
Homology
[Close]
BLAST of IVF0000409 vs. ExPASy TrEMBL
Match: A0A5D3D9C6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002390 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 8   QVCHAKLPRLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTYNPDATSV 67
           +VCHAKLPRLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTYNPDATSV
Sbjct: 167 KVCHAKLPRLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTYNPDATSV 226

Query: 68  PALFLFNSYFSNTKAPATAYFPSPRPA 95
           PALFLFNSYFSNTKAPATAYFPSPRPA
Sbjct: 227 PALFLFNSYFSNTKAPATAYFPSPRPA 253

[Close]
BLAST of IVF0000409 vs. ExPASy TrEMBL
Match: A0A0A0L569 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645270 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40
Identity = 83/94 (88.30%), Postives = 87/94 (92.55%), Query Frame = 0 

Query: 1  MQLMLAFQVCHAKLPRLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTY 60
          MQLMLAFQVC  K+PRL FGEMVRQTYNVQ+KTVEWKPRLQDPLAFNLYKW  LIGSSTY
Sbjct: 1  MQLMLAFQVCDVKVPRLGFGEMVRQTYNVQEKTVEWKPRLQDPLAFNLYKWVHLIGSSTY 60

Query: 61 NPDATSVPALFLFNSYFSNTKAPATAYFPSPRPA 95
          NPDATSVPAL L+NSYFSNT+ PATAYFPSPRPA
Sbjct: 61 NPDATSVPALLLYNSYFSNTRPPATAYFPSPRPA 94

[Close]
BLAST of IVF0000409 vs. NCBI nr
Match: TYK20114.1 (hypothetical protein E5676_scaffold134G002390 [Cucumis melo var. makuwa])

HSP 1 Score: 184 bits (468), Expect = 1.73e-56
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 8   QVCHAKLPRLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTYNPDATSV 67
           +VCHAKLPRLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTYNPDATSV
Sbjct: 167 KVCHAKLPRLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTYNPDATSV 226

Query: 68  PALFLFNSYFSNTKAPATAYFPSPRPA 94
           PALFLFNSYFSNTKAPATAYFPSPRPA
Sbjct: 227 PALFLFNSYFSNTKAPATAYFPSPRPA 253

[Close]
BLAST of IVF0000409 vs. NCBI nr
Match: KAE8649898.1 (hypothetical protein Csa_012324 [Cucumis sativus])

HSP 1 Score: 170 bits (431), Expect = 8.47e-51
Identity = 81/93 (87.10%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 2   QLMLAFQVCHAKLPRLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTYN 61
           +LMLAFQVC  K+PRL FGEMVRQTYNVQ+KTVEWKPRLQDPLAFNLYKW  LIGSSTYN
Sbjct: 168 KLMLAFQVCDVKVPRLGFGEMVRQTYNVQEKTVEWKPRLQDPLAFNLYKWVHLIGSSTYN 227

Query: 62  PDATSVPALFLFNSYFSNTKAPATAYFPSPRPA 94
           PDATSVPAL L+NSYFSNT+ PATAYFPSPRPA
Sbjct: 228 PDATSVPALLLYNSYFSNTRPPATAYFPSPRPA 260

The following BLAST results are available for this feature:
BLAST of IVF0000409 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0000409 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D9C61.2e-4398.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L5692.1e-4088.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645270 PE=4 SV=1[more]
BLAST of IVF0000409 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK20114.11.73e-5698.85hypothetical protein E5676_scaffold134G002390 [Cucumis melo var. makuwa][more]
KAE8649898.18.47e-5187.10hypothetical protein Csa_012324 [Cucumis sativus][more]
BLAST of IVF0000409 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0000409.1IVF0000409.1mRNA