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IVF0000333 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CACCCTGCATAAGAATACCTTTTCGCCTTCCTCATTCTTCATATACACCCACACACAATTAACCCTCACAAAACACAAAAACCATATCCCCCAAATGGCAGAAACCCATCAAGTATGGAGACAAATCCTCAAAACTACCTCGTATTGGGATCAAGAGAAAGCGTTTGCCGATGACGTCGCCGCCGTGTGGCCACCCAGATCTTACTCCTGCACCTTCTGTATGAGACAGTTTCGTTCAGCTCAAGCCTTAGGTGGCCACATGAATGTCCATCGAAGAGACCGTGCCAAGCTTCAAAACCATCCTAACCGTCGTCCATTCTTCATCAAACCAACTCCCACCTTTGATCTTCTCACTCACCATTTTTCTCCCAAAAACAATAACTCTCCTCCTTTCTCTCTCAAAAAACCTAAACTTGCTTCTTCTTCTTCTTCTTCTTCTAATTCTGAGCTCCACCTTGACCTCGAGCTCAAACTATAA CACCCTGCATAAGAATACCTTTTCGCCTTCCTCATTCTTCATATACACCCACACACAATTAACCCTCACAAAACACAAAAACCATATCCCCCAAATGGCAGAAACCCATCAAGTATGGAGACAAATCCTCAAAACTACCTCGTATTGGGATCAAGAGAAAGCGTTTGCCGATGACGTCGCCGCCGTGTGGCCACCCAGATCTTACTCCTGCACCTTCTGTATGAGACAGTTTCGTTCAGCTCAAGCCTTAGGTGGCCACATGAATGTCCATCGAAGAGACCGTGCCAAGCTTCAAAACCATCCTAACCGTCGTCCATTCTTCATCAAACCAACTCCCACCTTTGATCTTCTCACTCACCATTTTTCTCCCAAAAACAATAACTCTCCTCCTTTCTCTCTCAAAAAACCTAAACTTGCTTCTTCTTCTTCTTCTTCTTCTAATTCTGAGCTCCACCTTGACCTCGAGCTCAAACTATAA ATGGCAGAAACCCATCAAGTATGGAGACAAATCCTCAAAACTACCTCGTATTGGGATCAAGAGAAAGCGTTTGCCGATGACGTCGCCGCCGTGTGGCCACCCAGATCTTACTCCTGCACCTTCTGTATGAGACAGTTTCGTTCAGCTCAAGCCTTAGGTGGCCACATGAATGTCCATCGAAGAGACCGTGCCAAGCTTCAAAACCATCCTAACCGTCGTCCATTCTTCATCAAACCAACTCCCACCTTTGATCTTCTCACTCACCATTTTTCTCCCAAAAACAATAACTCTCCTCCTTTCTCTCTCAAAAAACCTAAACTTGCTTCTTCTTCTTCTTCTTCTTCTAATTCTGAGCTCCACCTTGACCTCGAGCTCAAACTATAA MAETHQVWRQILKTTSYWDQEKAFADDVAAVWPPRSYSCTFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRRPFFIKPTPTFDLLTHHFSPKNNNSPPFSLKKPKLASSSSSSSNSELHLDLELKL Homology
BLAST of IVF0000333 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 6.8e-15 Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of IVF0000333 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.4e-14 Identity = 44/91 (48.35%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of IVF0000333 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.9e-13 Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of IVF0000333 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 75.5 bits (184), Expect = 4.9e-13 Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of IVF0000333 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08 Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of IVF0000333 vs. ExPASy TrEMBL
Match: A0A5A7UA35 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00710 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 4.7e-67 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of IVF0000333 vs. ExPASy TrEMBL
Match: A0A1S3CGM6 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103500239 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 4.7e-67 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of IVF0000333 vs. ExPASy TrEMBL
Match: A0A0A0KLQ3 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G183770 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60 Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of IVF0000333 vs. ExPASy TrEMBL
Match: A0A6J1JCP1 (zinc finger protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111485589 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.4e-33 Identity = 88/135 (65.19%), Postives = 97/135 (71.85%), Query Frame = 0
BLAST of IVF0000333 vs. ExPASy TrEMBL
Match: A0A2P5A8Y7 (Zinc finger transcription factor OS=Parasponia andersonii OX=3476 GN=PanZnF21 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 4.9e-16 Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 0
BLAST of IVF0000333 vs. NCBI nr
Match: XP_008461701.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo] >KAA0050359.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYK03572.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa]) HSP 1 Score: 262 bits (669), Expect = 2.89e-88 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of IVF0000333 vs. NCBI nr
Match: XP_004151402.2 (zinc finger protein 11 [Cucumis sativus] >KGN50575.1 hypothetical protein Csa_021472 [Cucumis sativus]) HSP 1 Score: 241 bits (614), Expect = 8.12e-80 Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of IVF0000333 vs. NCBI nr
Match: XP_023542190.1 (zinc finger protein 10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 151 bits (382), Expect = 1.55e-44 Identity = 89/135 (65.93%), Postives = 97/135 (71.85%), Query Frame = 0
BLAST of IVF0000333 vs. NCBI nr
Match: XP_022988302.1 (zinc finger protein 10-like [Cucurbita maxima]) HSP 1 Score: 149 bits (377), Expect = 8.95e-44 Identity = 88/135 (65.19%), Postives = 97/135 (71.85%), Query Frame = 0
BLAST of IVF0000333 vs. NCBI nr
Match: KAG6600035.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030703.1 Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145 bits (365), Expect = 5.99e-42 Identity = 86/135 (63.70%), Postives = 96/135 (71.11%), Query Frame = 0
BLAST of IVF0000333 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 ) HSP 1 Score: 81.6 bits (200), Expect = 4.9e-16 Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of IVF0000333 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 ) HSP 1 Score: 79.0 bits (193), Expect = 3.1e-15 Identity = 44/91 (48.35%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of IVF0000333 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 2.0e-14 Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of IVF0000333 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 3.5e-14 Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of IVF0000333 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 74.3 bits (181), Expect = 7.7e-14 Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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