IVF0000260 (gene) Melon (IVF77) v1

Overview


Name	IVF0000260
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	WEB family protein At3g51220
Location	chr10: 4213209 .. 4214098 (-)
RNA-Seq Expression	IVF0000260
Synteny	IVF0000260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAAATATACCATATCTTCCCACATCCTCGTACACATCCCAAACTCACTGACCATCCAACCATGGAAGACCCTGAAATACCTAGCCAAAGTTCTGCCTCCACGGTCGACACCTCGCGTCCCTTCCGCTCCGTGAAAGAAGCTGTTGCCGTGTTTGGCGAACGCCTTCTAGTTGGAGACGCATACTCATCATCTCCAAAACCATCCACCGACGCCCCATTGCCTGAAATAGGCACATGGGAGGCAATGCCAAGCTCTACAACAACAATAAAAGAAGAGAAAGAACATGTTTTGGATAGCTTGAAGAAACTCGAGGCAGAGCTGGAAGAGACCAAGGAAGAGTTGAGATTGCTAAAGGAAAGGGAAGAAGATACAGAAGTGGCATTGGCATCACTGAATGCAGAGCTACATAAGAACATGTCAAAGTTAGCCGAGGCCGAGGCCGCTGCTGCGGCAAAAGCTGCAGCGACGAGAAGAATTGCAACGGGATGCGAGAGGGGAAGGATAGAAGAAGAAATGAAGAGGTCGGAATTGAAGATGAGGAGAATGGAGGAGACAGAGTCACCTACATTGGCTCAGATATTGAGCTTTGGAGACAAAATAGGGTATTTTGGAGGGAAGAAGGAGAAGAAAAAGATAAAGAAAAAACCAATTATTCCTCTGGTGGGAGATTTGTTGTTAATATTAAGGAAAAAAGGGTCTTCTGAGAGTGATCTTCGTTCATCTTTCAATTCCTTCAATTAGAAACCTTTGTATTTGCCTTCTACCTTCTCCTACTTTTATGTTTCTCTATCGAGTTTGTGTATCCGTTGTGAACTGTATTTTAGTGTATATTTGGAAGTGATTTTGAAATTGTTGAAATCACTTTTGTTATTTTTAAAATTACCGTGG

mRNA sequence

GTCAAATATACCATATCTTCCCACATCCTCGTACACATCCCAAACTCACTGACCATCCAACCATGGAAGACCCTGAAATACCTAGCCAAAGTTCTGCCTCCACGGTCGACACCTCGCGTCCCTTCCGCTCCGTGAAAGAAGCTGTTGCCGTGTTTGGCGAACGCCTTCTAGTTGGAGACGCATACTCATCATCTCCAAAACCATCCACCGACGCCCCATTGCCTGAAATAGGCACATGGGAGGCAATGCCAAGCTCTACAACAACAATAAAAGAAGAGAAAGAACATGTTTTGGATAGCTTGAAGAAACTCGAGGCAGAGCTGGAAGAGACCAAGGAAGAGTTGAGATTGCTAAAGGAAAGGGAAGAAGATACAGAAGTGGCATTGGCATCACTGAATGCAGAGCTACATAAGAACATGTCAAAGTTAGCCGAGGCCGAGGCCGCTGCTGCGGCAAAAGCTGCAGCGACGAGAAGAATTGCAACGGGATGCGAGAGGGGAAGGATAGAAGAAGAAATGAAGAGGTCGGAATTGAAGATGAGGAGAATGGAGGAGACAGAGTCACCTACATTGGCTCAGATATTGAGCTTTGGAGACAAAATAGGGTATTTTGGAGGGAAGAAGGAGAAGAAAAAGATAAAGAAAAAACCAATTATTCCTCTGGTGGGAGATTTGTTGTTAATATTAAGGAAAAAAGGGTCTTCTGAGAGTGATCTTCGTTCATCTTTCAATTCCTTCAATTAGAAACCTTTGTATTTGCCTTCTACCTTCTCCTACTTTTATGTTTCTCTATCGAGTTTGTGTATCCGTTGTGAACTGTATTTTAGTGTATATTTGGAAGTGATTTTGAAATTGTTGAAATCACTTTTGTTATTTTTAAAATTACCGTGG

Coding sequence (CDS)

ATGGAAGACCCTGAAATACCTAGCCAAAGTTCTGCCTCCACGGTCGACACCTCGCGTCCCTTCCGCTCCGTGAAAGAAGCTGTTGCCGTGTTTGGCGAACGCCTTCTAGTTGGAGACGCATACTCATCATCTCCAAAACCATCCACCGACGCCCCATTGCCTGAAATAGGCACATGGGAGGCAATGCCAAGCTCTACAACAACAATAAAAGAAGAGAAAGAACATGTTTTGGATAGCTTGAAGAAACTCGAGGCAGAGCTGGAAGAGACCAAGGAAGAGTTGAGATTGCTAAAGGAAAGGGAAGAAGATACAGAAGTGGCATTGGCATCACTGAATGCAGAGCTACATAAGAACATGTCAAAGTTAGCCGAGGCCGAGGCCGCTGCTGCGGCAAAAGCTGCAGCGACGAGAAGAATTGCAACGGGATGCGAGAGGGGAAGGATAGAAGAAGAAATGAAGAGGTCGGAATTGAAGATGAGGAGAATGGAGGAGACAGAGTCACCTACATTGGCTCAGATATTGAGCTTTGGAGACAAAATAGGGTATTTTGGAGGGAAGAAGGAGAAGAAAAAGATAAAGAAAAAACCAATTATTCCTCTGGTGGGAGATTTGTTGTTAATATTAAGGAAAAAAGGGTCTTCTGAGAGTGATCTTCGTTCATCTTTCAATTCCTTCAATTAG

Protein sequence

MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWEAMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKIGYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN

Homology

[Close]

BLAST of IVF0000260 vs. ExPASy TrEMBL
Match: A0A1S3BDZ1 (LOW QUALITY PROTEIN: WEB family protein At1g75720 OS=Cucumis melo OX=3656 GN=LOC103488845 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60
           MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE
Sbjct: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180
           KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI
Sbjct: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180

Query: 181 GYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN 227
           GYFGGKKEKKK K+KPIIPLVGDLLLILRKKGSSESDLRSSFNSFN
Sbjct: 181 GYFGGKKEKKK-KEKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN 225

[Close]

BLAST of IVF0000260 vs. ExPASy TrEMBL
Match: A0A0A0KPW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G586550 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 211/223 (94.62%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60
           MEDPEIPSQ+SAS VDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE
Sbjct: 1   MEDPEIPSQTSASAVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           AMPSSTTTIKEEKEHVL SLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLVSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180
           KLAEAEAAAA KAAA RRI T    GRIEEEMKRSELKMRRMEET+SPTLAQILSFGDKI
Sbjct: 121 KLAEAEAAAAGKAAAARRIVTS---GRIEEEMKRSELKMRRMEETDSPTLAQILSFGDKI 180

Query: 181 GYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSESDLRSSFN 224
           GYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSE+DLRSSFN
Sbjct: 181 GYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSENDLRSSFN 220

[Close]

BLAST of IVF0000260 vs. ExPASy TrEMBL
Match: A0A5A7SSG4 (NifU-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002690 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.6e-97
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60
           MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE
Sbjct: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180
           KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI
Sbjct: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180

Query: 181 GYFGGKKEKKKIKKKPIIPL 201
           GYFGGKKEKKKIKKKPIIPL
Sbjct: 181 GYFGGKKEKKKIKKKPIIPL 200

[Close]

BLAST of IVF0000260 vs. ExPASy TrEMBL
Match: A0A6J1KE80 (WEB family protein At3g51220 OS=Cucurbita maxima OX=3661 GN=LOC111493039 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 9.2e-74
Identity = 174/229 (75.98%), Postives = 188/229 (82.10%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60
           MEDPE+P+QSSAS VDTSRPFRSVKEAVAVFGERLLVG+AYSSSPKP  +APL E GTW+
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCANAPLSETGTWD 60

Query: 61  AMPSSTTTIKEEKEH-VLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           ++ SSTTT+KEEKEH VLD+LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTVKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKL--AEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFG 180
           SKL  AEAEAAAAAKA ATRRI  GCE GRIEEEMKR+E             LAQIL   
Sbjct: 121 SKLAEAEAEAAAAAKAVATRRITMGCENGRIEEEMKRTE------------ALAQILR-- 180

Query: 181 DKIGYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN 227
                FGGKKEKKK+KKKPIIPLVGDLL+ LR+KGS    L SSF SF+
Sbjct: 181 -----FGGKKEKKKVKKKPIIPLVGDLLMRLRRKGS----LSSSFKSFD 206

[Close]

BLAST of IVF0000260 vs. ExPASy TrEMBL
Match: A0A6J1GY99 (WEB family protein At3g51220 OS=Cucurbita moschata OX=3662 GN=LOC111458595 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.5e-71
Identity = 171/229 (74.67%), Postives = 185/229 (80.79%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60
           MEDPE+P+QSSAS VDTSRPFRSVKEAVAVFGERLLV +AYSS PKP  +APL E GTW+
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVEEAYSSLPKPCPNAPLAETGTWD 60

Query: 61  AMPSSTTTIKEEKEH-VLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           ++ SSTTT+KEEKEH VLD+LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKL--AEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFG 180
           S L  AEAEAAAAAKA ATRRI  GCE GRIEEEM+R+E             LAQIL   
Sbjct: 121 SNLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTE------------PLAQILR-- 180

Query: 181 DKIGYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN 227
                FGGKKEKKK+KKKPIIPLVGDLL+ LR+KGS    L SSF SFN
Sbjct: 181 -----FGGKKEKKKVKKKPIIPLVGDLLMRLRRKGS----LTSSFKSFN 206

[Close]

BLAST of IVF0000260 vs. NCBI nr
Match: XP_008445978.1 (PREDICTED: LOW QUALITY PROTEIN: WEB family protein At1g75720 [Cucumis melo])

HSP 1 Score: 401 bits (1030), Expect = 4.50e-140
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60
           MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE
Sbjct: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180
           KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI
Sbjct: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180

Query: 181 GYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN 226
           GYFGGKKEKKK K+KPIIPLVGDLLLILRKKGSSESDLRSSFNSFN
Sbjct: 181 GYFGGKKEKKK-KEKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN 225

[Close]

BLAST of IVF0000260 vs. NCBI nr
Match: XP_004135525.2 (WEB family protein At1g75720 [Cucumis sativus])

HSP 1 Score: 375 bits (962), Expect = 5.08e-129
Identity = 211/223 (94.62%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60
           MEDPEIPSQ+SAS VDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE
Sbjct: 51  MEDPEIPSQTSASAVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 110

Query: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           AMPSSTTTIKEEKEHVL SLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 111 AMPSSTTTIKEEKEHVLVSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 170

Query: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180
           KLAEAEAAAA KAAA RRI T    GRIEEEMKRSELKMRRMEET+SPTLAQILSFGDKI
Sbjct: 171 KLAEAEAAAAGKAAAARRIVTS---GRIEEEMKRSELKMRRMEETDSPTLAQILSFGDKI 230

Query: 181 GYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSESDLRSSFN 223
           GYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSE+DLRSSFN
Sbjct: 231 GYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSENDLRSSFN 270

[Close]

BLAST of IVF0000260 vs. NCBI nr
Match: XP_038877864.1 (WEB family protein At1g75720 [Benincasa hispida])

HSP 1 Score: 357 bits (916), Expect = 1.09e-122
Identity = 199/226 (88.05%), Postives = 206/226 (91.15%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60
           ME  E+P+QSS S VDTSRPFRSVKEAVAVFGERLLVGDAYSS PKPS D PLPE+GTWE
Sbjct: 1   MEGSEMPNQSSGSIVDTSRPFRSVKEAVAVFGERLLVGDAYSSLPKPSADVPLPELGTWE 60

Query: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           ++PSSTTT KEEKEHVLDSLKKLEAELEETKEELRLLKE+EEDTEVALASLNAELHKNMS
Sbjct: 61  SLPSSTTTAKEEKEHVLDSLKKLEAELEETKEELRLLKEKEEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180
           KLAEAEAAAAAKA ATRRIA GCE  R EEEMKRSE KM RMEETESPTLAQILSFGDKI
Sbjct: 121 KLAEAEAAAAAKAVATRRIAMGCESERKEEEMKRSEFKMMRMEETESPTLAQILSFGDKI 180

Query: 181 GYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN 226
           GYFGGKKEKKKIKKKPIIPLVGDLL I RKKGS E+ L SSFNSFN
Sbjct: 181 GYFGGKKEKKKIKKKPIIPLVGDLLFIFRKKGSPENALPSSFNSFN 226

[Close]

BLAST of IVF0000260 vs. NCBI nr
Match: KAA0034154.1 (nifU-like protein 2 [Cucumis melo var. makuwa] >TYK15765.1 nifU-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 361 bits (927), Expect = 7.00e-121
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60
           MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE
Sbjct: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180
           KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI
Sbjct: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180

Query: 181 GYFGGKKEKKKIKKKPIIPL 200
           GYFGGKKEKKKIKKKPIIPL
Sbjct: 181 GYFGGKKEKKKIKKKPIIPL 200

[Close]

BLAST of IVF0000260 vs. NCBI nr
Match: KAE8648652.1 (hypothetical protein Csa_009073 [Cucumis sativus])

HSP 1 Score: 297 bits (760), Expect = 1.36e-96
Identity = 170/181 (93.92%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60
           MEDPEIPSQ+SAS VDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE
Sbjct: 1   MEDPEIPSQTSASAVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           AMPSSTTTIKEEKEHVL SLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLVSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKI 180
           KLAEAEAAAA KAAA RRI T    GRIEEEMKRSELKMRRMEET+SPTLAQILSFGDKI
Sbjct: 121 KLAEAEAAAAGKAAAARRIVTS---GRIEEEMKRSELKMRRMEETDSPTLAQILSFGDKI 178

[Close]

BLAST of IVF0000260 vs. TAIR 10
Match: AT1G58070.1 (unknown protein; Has 286 Blast hits to 266 proteins in 81 species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi - 19; Plants - 78; Viruses - 4; Other Eukaryotes - 68 (source: NCBI BLink). )

HSP 1 Score: 128.6 bits (322), Expect = 6.2e-30
Identity = 109/269 (40.52%), Postives = 154/269 (57.25%), Query Frame = 0


Query: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVG------DAYSSSP--------- 60
           +E+ E  +Q     VDTSRPF SVKEAVA+FG+R+++       ++ S+SP         
Sbjct: 3   IEEMEGNNQVEEHHVDTSRPFSSVKEAVAIFGQRIMLPVQTHTMNSKSASPIAASRSINQ 62

Query: 61  --KPSTD------------------------APLPEIGTWEAMPSSTTTIKEE------- 120
             KP +                         +P+      +   SS++  K+        
Sbjct: 63  NAKPRSPGLSQTVKLVIPTASPSISQTAKLVSPIASPSISQTASSSSSPWKQRSLLPPSP 122

Query: 121 ---KEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAAA 180
              KE ++D LKKLEAE+ ETK E+++LKERE +TEVALA+LNAELHKN SK+A+AEA A
Sbjct: 123 QGPKEEIMDVLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKNKSKIAKAEADA 182

Query: 181 AAKAAA--TRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQIL--SFGDKIGYFGG 215
           A K+AA  T+ ++    + +   E +R +  MR+M++ E P+LAQIL  + G++ GYF  
Sbjct: 183 AGKSAAAMTKSVSFKDTKEKENGEDQRRKELMRKMQK-EYPSLAQILDSNKGNRDGYFAN 242

[Close]

BLAST of IVF0000260 vs. TAIR 10
Match: AT1G75720.2 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 61/198 (30.81%), Postives = 86/198 (43.43%), Query Frame = 0


Query: 15  VDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWEAMPSSTTTIKEEKE 74
           +DT+ PFR+VKEAVA+FGER+L    YS+  K   D        WE      + IK E +
Sbjct: 10  IDTTAPFRTVKEAVALFGERVLASQVYSNHLKVMHDE------KWE----DPSGIKIELQ 69

Query: 75  HVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAAAAAKAA 134
                LK+ + E  + +  L  LKE  E T+  L  L  +   N +KL E       +  
Sbjct: 70  ETRYDLKRAKEESIQMRNSLSCLKEELERTKQELQKLRVDPGVNETKLDETVFKTKFEVL 129

Query: 135 ATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKIGYFGG--------- 194
                       R+++E  RS  ++R M E       + + F +  G  G          
Sbjct: 130 VP----------RVDDEPIRSP-RLRSMSE------KRYVKFANPTGNNGSVFLERHPSM 180

Query: 195 -KKEK--KKIKKKPIIPL 201
            KKEK  K  KKK +IPL
Sbjct: 190 KKKEKKTKDKKKKSLIPL 180

[Close]

BLAST of IVF0000260 vs. TAIR 10
Match: AT1G75720.1 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04
Identity = 60/198 (30.30%), Postives = 88/198 (44.44%), Query Frame = 0


Query: 15  VDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWEAMPSSTTTIKEEKE 74
           +DT+ PFR+VKEAVA+FGER+L    YS+  K +    + +   WE      + IK E +
Sbjct: 9   IDTTAPFRTVKEAVALFGERVLASQVYSNHLKVAMKIQMHD-EKWE----DPSGIKIELQ 68

Query: 75  HVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAAAAAKAA 134
                LK+ + E  + +  L  LKE  E T+  L  L  +   N +KL E       +  
Sbjct: 69  ETRYDLKRAKEESIQMRNSLSCLKEELERTKQELQKLRVDPGVNETKLDETVFKTKFEVL 128

Query: 135 ATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDKIGYFGG--------- 194
                       R+++E  RS  ++R M E       + + F +  G  G          
Sbjct: 129 VP----------RVDDEPIRSP-RLRSMSE------KRYVKFANPTGNNGSVFLERHPSM 184

Query: 195 -KKEK--KKIKKKPIIPL 201
            KKEK  K  KKK +IPL
Sbjct: 189 KKKEKKTKDKKKKSLIPL 184

[Close]

BLAST of IVF0000260 vs. TAIR 10
Match: AT3G51220.1 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 42.0 bits (97), Expect = 7.6e-04
Identity = 54/202 (26.73%), Postives = 85/202 (42.08%), Query Frame = 0


Query: 15  VDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWEAMPSSTTTIKEEKE 74
           ++T  PFRSVKEAV +FGER+L+GD Y S                    SS  +I++E  
Sbjct: 6   IETGAPFRSVKEAVTLFGERILLGDNYISK---------------SVERSSCKSIQDELV 65

Query: 75  HVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAAAAAKAA 134
              ++LKK E   EE K   +L++   ++ E     LN  L +N  +  + E        
Sbjct: 66  EAKENLKKAE---EENKVLSQLIESLTQELETTKEKLNHSL-RNFPEHPQVEDDLKF--- 125

Query: 135 ATRRIATGCERGRIEEEMKRSELKMRRMEETE----------------SPTLAQILSFGD 194
                    E   + E    +E+KM R +  E                 P L +++   +
Sbjct: 126 --------IEESTVNEPDNITEIKMNRFDRNEVYGDRLEKRRSVKFANPPLLTKVIVGKE 175

Query: 195 KIGYFGGKKEKKKIKKKPIIPL 201
           +      KK+ KK+  KP++PL
Sbjct: 186 EKNQVMVKKQTKKM--KPLVPL 175

The following BLAST results are available for this feature:

BLAST of IVF0000260 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0000260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDZ1	1.4e-109	99.12	LOW QUALITY PROTEIN: WEB family protein At1g75720 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KPW0	1.4e-101	94.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G586550 PE=4 SV=1	[more]
A0A5A7SSG4	1.6e-97	100.00	NifU-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G0...	[more]
A0A6J1KE80	9.2e-74	75.98	WEB family protein At3g51220 OS=Cucurbita maxima OX=3661 GN=LOC111493039 PE=4 SV...	[more]
A0A6J1GY99	2.5e-71	74.67	WEB family protein At3g51220 OS=Cucurbita moschata OX=3662 GN=LOC111458595 PE=4 ...	[more]

BLAST of IVF0000260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445978.1	4.50e-140	99.12	PREDICTED: LOW QUALITY PROTEIN: WEB family protein At1g75720 [Cucumis melo]	[more]
XP_004135525.2	5.08e-129	94.62	WEB family protein At1g75720 [Cucumis sativus]	[more]
XP_038877864.1	1.09e-122	88.05	WEB family protein At1g75720 [Benincasa hispida]	[more]
KAA0034154.1	7.00e-121	100.00	nifU-like protein 2 [Cucumis melo var. makuwa] >TYK15765.1 nifU-like protein 2 [...	[more]
KAE8648652.1	1.36e-96	93.92	hypothetical protein Csa_009073 [Cucumis sativus]	[more]

BLAST of IVF0000260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G58070.1	6.2e-30	40.52	unknown protein; Has 286 Blast hits to 266 proteins in 81 species: Archae - 2; B...	[more]
AT1G75720.2	1.5e-04	30.81	Plant protein of unknown function (DUF827)	[more]
AT1G75720.1	2.0e-04	30.30	Plant protein of unknown function (DUF827)	[more]
AT3G51220.1	7.6e-04	26.73	Plant protein of unknown function (DUF827)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 70..128
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..59
None	No IPR available	PANTHER	PTHR32054:SF11	EXPRESSED PROTEIN	coord: 9..215
None	No IPR available	PANTHER	PTHR32054	HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED	coord: 9..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000260.1	IVF0000260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding