IVF0000258 (gene) Melon (IVF77) v1

Overview


Name	IVF0000258
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Egg cell-secreted protein 1.2-like
Location	chr07: 21328080 .. 21328415 (-)
RNA-Seq Expression	IVF0000258
Synteny	IVF0000258

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCTTCTTACAAAATTCTGTGTTCTTCTTTTTCTTTTAGCAATGGTTTTCTCATCCACGGTAGAAGCAAGCCGAGGTGATGCGGAAGTGAGCCCTGCAGCACGAATTAAGTTGGATGGTGCCTTCGATTGTTTGAGATCTCTGCCTCAACTGGGTAAATGTATCGATGATATTCGAGCTATATTTCGAAATCGGCATAAATGGAAAATAAGTTTGAACTGCTGCCATGCAATTAAGAATATAGAACATGAGTGTTGGCCAGAATATCTGAATCTGATGGGCTTCACAGCAAAAGAAATTGGGATTATTGATGAGAATTGCAAGATCAACTAA

mRNA sequence

ATGACTCTTCTTACAAAATTCTGTGTTCTTCTTTTTCTTTTAGCAATGGTTTTCTCATCCACGGTAGAAGCAAGCCGAGGTGATGCGGAAGTGAGCCCTGCAGCACGAATTAAGTTGGATGGTGCCTTCGATTGTTTGAGATCTCTGCCTCAACTGGGTAAATGTATCGATGATATTCGAGCTATATTTCGAAATCGGCATAAATGGAAAATAAGTTTGAACTGCTGCCATGCAATTAAGAATATAGAACATGAGTGTTGGCCAGAATATCTGAATCTGATGGGCTTCACAGCAAAAGAAATTGGGATTATTGATGAGAATTGCAAGATCAACTAA

Coding sequence (CDS)

ATGACTCTTCTTACAAAATTCTGTGTTCTTCTTTTTCTTTTAGCAATGGTTTTCTCATCCACGGTAGAAGCAAGCCGAGGTGATGCGGAAGTGAGCCCTGCAGCACGAATTAAGTTGGATGGTGCCTTCGATTGTTTGAGATCTCTGCCTCAACTGGGTAAATGTATCGATGATATTCGAGCTATATTTCGAAATCGGCATAAATGGAAAATAAGTTTGAACTGCTGCCATGCAATTAAGAATATAGAACATGAGTGTTGGCCAGAATATCTGAATCTGATGGGCTTCACAGCAAAAGAAATTGGGATTATTGATGAGAATTGCAAGATCAACTAA

Protein sequence

MTLLTKFCVLLFLLAMVFSSTVEASRGDAEVSPAARIKLDGAFDCLRSLPQLGKCIDDIRAIFRNRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCKIN

Homology

[Close]

BLAST of IVF0000258 vs. ExPASy Swiss-Prot
Match: Q9SJ24 (Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana OX=3702 GN=EC1.2 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-07
Identity = 30/103 (29.13%), Postives = 52/103 (50.49%), Query Frame = 0


Query: 7   FCVLLFLLAMVFSSTVEASRGDAEVSPAARIKLDGAFDCLRSLPQLGKCIDDIRAIFRNR 66
           F  +  LL +  S        D+  + AAR+   G  +C  +L +L  C ++I   F N 
Sbjct: 9   FATIAILLVLNISGRTLPETEDS-TNIAARLNGGGLMECWNALYELKSCTNEIVLFFLN- 68

Query: 67  HKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCK 110
            + K+ ++CC A++ I  +CWP  L  +GFT+ E  ++   C+
Sbjct: 69  GETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQ 109

[Close]

BLAST of IVF0000258 vs. ExPASy Swiss-Prot
Match: Q9SRD8 (Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana OX=3702 GN=EC1.1 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.0e-07
Identity = 39/111 (35.14%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 10  LLFLLAMVFSSTVEA------SRGDAE--VSPAARIKLD-GAFDCLRSLPQLGKCIDDIR 69
           ++ L+ MV SSTV A      S G +    S   R+KLD     C  SL QL  C  ++ 
Sbjct: 13  IVTLMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELI 72

Query: 70  AIFRNRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCKIN 112
             F N   + I   CC AI+ I  +CWP  + ++GFTA+E  ++   C  N
Sbjct: 73  LFFLNGETY-IGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCDGN 122

[Close]

BLAST of IVF0000258 vs. ExPASy TrEMBL
Match: A0A5D3DGY6 (Egg cell-secreted protein 1.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold81220G00010 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 16  MVFSSTVEASRGDAEVSPAARIKLDGAFDCLRSLPQLGKCIDDIRAIFRNRHKWKISLNC 75
           MVFSSTVEASRGDAEVSPAARIKLDGAFDCLRSLPQLGKCIDDIRAIFRNRHKWKISLNC
Sbjct: 1   MVFSSTVEASRGDAEVSPAARIKLDGAFDCLRSLPQLGKCIDDIRAIFRNRHKWKISLNC 60

Query: 76  CHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCKIN 112
           CHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCKIN
Sbjct: 61  CHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCKIN 96

[Close]

BLAST of IVF0000258 vs. ExPASy TrEMBL
Match: A0A6J1KEX2 (egg cell-secreted protein 1.1-like OS=Cucurbita maxima OX=3661 GN=LOC111493240 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.4e-11
Identity = 47/109 (43.12%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 1   MTLLTKFCVLLFLLAMVFSSTVEASRGDAEVSPAARIKL-DGAFDCLRSLPQLGKCIDDI 60
           M  L K  VL   LA++ SST+E S+ + E+S A R+KL D   DC  SL QL  C  +I
Sbjct: 1   MANLLKLFVLTSFLALIVSSTME-SKSNPEMSLATRMKLNDEISDCWGSLYQLQACTAEI 60

Query: 61  RAIFRNRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENC 109
              F N   + +  NCC AIK I+HECWP  L  +G+T +E  I++  C
Sbjct: 61  ITFFLNGETY-LGPNCCEAIKVIQHECWPTLLGSLGYTTEEGDILEAYC 107

[Close]

BLAST of IVF0000258 vs. ExPASy TrEMBL
Match: A0A6J1KD37 (egg cell-secreted protein 1.1-like OS=Cucurbita maxima OX=3661 GN=LOC111493241 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.5e-10
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 1   MTLLTKFCVLLFLLAMVFSSTVEASRGDAEVSPAARIKL-DGAFDCLRSLPQLGKCIDDI 60
           M  L K  + +  LA++ SST E SR + E+S A R KL D   DC  SL QL  C  +I
Sbjct: 1   MASLLKLFITMSFLALIVSSTTE-SRPNPEMSLAVRTKLNDEISDCWGSLYQLQACTAEI 60

Query: 61  RAIFRNRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENC 109
              F     + +  NCC AIK I+HECWP  L  +G+T +E  I++  C
Sbjct: 61  ITFFLTGETY-LGPNCCEAIKVIQHECWPTLLGSLGYTTEEGDILEAYC 107

[Close]

BLAST of IVF0000258 vs. ExPASy TrEMBL
Match: A0A0A0K9I7 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G056550 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.6e-10
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 1   MTLLTKFCVLLFLLAMVFSSTVEASRGDAEVSPAARIKLD-GAFDCLRSLPQLGKCIDDI 60
           M  L+K  +L  LL   FS  VE SR + EVS A R+ L+  A DC  SL QL  C  +I
Sbjct: 1   MAYLSKLLILTCLLIFAFSYMVE-SRPNPEVSLATRLNLESNASDCWGSLFQLEACSSEI 60

Query: 61  RAIFRNRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENC 109
              F N  K  +S  CC ++K I+H+CWP  L  +G+TA E  ++   C
Sbjct: 61  ITFFLN-GKINLSPKCCQSVKIIQHKCWPALLGSLGYTADEANVLAIYC 107

[Close]

BLAST of IVF0000258 vs. ExPASy TrEMBL
Match: A0A0A0LSR4 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G124020 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08
Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 1   MTLLTKFCVLLFLLAMVFSSTVEASRGDAEVSPAARIKLDG-AFDCLRSLPQLGKCIDDI 60
           M  L K  +    LA +F  TVE+S  + + S A RIKL+G   DC  SL +L  C  ++
Sbjct: 1   MASLLKLLIATSFLAHMFFFTVESS-PNPKSSLATRIKLEGETSDCWGSLYELQACTGEV 60

Query: 61  RAIFRNRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENC 109
              F +   + + + CC AI+ I+HECWP  L  +G+T +E  I++  C
Sbjct: 61  ITFFLSGEAY-LGVKCCQAIRTIQHECWPTLLGSLGYTTEEGDILEAYC 107

[Close]

BLAST of IVF0000258 vs. NCBI nr
Match: TYK22823.1 (egg cell-secreted protein 1.2-like [Cucumis melo var. makuwa])

HSP 1 Score: 207 bits (527), Expect = 2.52e-67
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 16  MVFSSTVEASRGDAEVSPAARIKLDGAFDCLRSLPQLGKCIDDIRAIFRNRHKWKISLNC 75
           MVFSSTVEASRGDAEVSPAARIKLDGAFDCLRSLPQLGKCIDDIRAIFRNRHKWKISLNC
Sbjct: 1   MVFSSTVEASRGDAEVSPAARIKLDGAFDCLRSLPQLGKCIDDIRAIFRNRHKWKISLNC 60

Query: 76  CHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCKIN 111
           CHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCKIN
Sbjct: 61  CHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCKIN 96

[Close]

BLAST of IVF0000258 vs. NCBI nr
Match: KAG6607143.1 (Egg cell-secreted protein 1.1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.3 bits (207), Expect = 4.39e-18
Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 4   LTKFCVLLFLLAMVFSSTVEASRGDAEVSPAARIKL-DGAFDCLRSLPQLGKCIDDIRAI 63
           L K  + +  LA++FSSTVE SR + E+S AAR+KL D   DC  SL QL  C  +I   
Sbjct: 4   LLKLFITMSFLALIFSSTVE-SRSNPEMSLAARMKLNDEISDCWGSLYQLQACTAEIITF 63

Query: 64  FRNRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENC 108
           F N   + +  NCC AIK I+HECWP  L  +G+TA+E  I++  C
Sbjct: 64  FLNGETY-LGPNCCEAIKVIQHECWPTLLGSLGYTAEEGDILEAYC 107

[Close]

BLAST of IVF0000258 vs. NCBI nr
Match: XP_023524587.1 (egg cell-secreted protein 1.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.7 bits (195), Expect = 2.81e-16
Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 0


Query: 4   LTKFCVLLFLLAMVFSSTVEASRGDAEVSPAARIKL-DGAFDCLRSLPQLGKCIDDIRAI 63
           L K  + +  LA++FSST E SR + E+S AAR+KL D   DC  SL QL  C  +I   
Sbjct: 4   LLKLFIAMSFLALIFSSTAE-SRPNPEMSLAARMKLNDEISDCWGSLYQLQACTAEIITF 63

Query: 64  FRNRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENC 108
           F N   + +  NCC AIK I+HECWP  L  +G+T +E  I++  C
Sbjct: 64  FLNGETY-LGPNCCEAIKVIQHECWPTLLGSLGYTNEEGDILEAYC 107

[Close]

BLAST of IVF0000258 vs. NCBI nr
Match: XP_022998659.1 (egg cell-secreted protein 1.1-like [Cucurbita maxima])

HSP 1 Score: 77.4 bits (189), Expect = 2.24e-15
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 4   LTKFCVLLFLLAMVFSSTVEASRGDAEVSPAARIKL-DGAFDCLRSLPQLGKCIDDIRAI 63
           L K  VL   LA++ SST+E S+ + E+S A R+KL D   DC  SL QL  C  +I   
Sbjct: 4   LLKLFVLTSFLALIVSSTME-SKSNPEMSLATRMKLNDEISDCWGSLYQLQACTAEIITF 63

Query: 64  FRNRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENC 108
           F N   + +  NCC AIK I+HECWP  L  +G+T +E  I++  C
Sbjct: 64  FLNGETY-LGPNCCEAIKVIQHECWPTLLGSLGYTTEEGDILEAYC 107

[Close]

BLAST of IVF0000258 vs. NCBI nr
Match: XP_023524588.1 (egg cell-secreted protein 1.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 75.5 bits (184), Expect = 1.26e-14
Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 6   KFCVLLFLLAMVFSSTVEASRGDAEVSPAARIKL-DGAFDCLRSLPQLGKCIDDIRAIFR 65
           K  VL F LA++  ST E SR + E+S A ++KL D   DC  SL +L  C  +I   F 
Sbjct: 6   KLFVLTFFLALIVLSTTE-SRPNPEMSLATQMKLNDEVSDCWGSLYELQACTAEIITFFL 65

Query: 66  NRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENC 108
           N   + +  NCC AIK I+HECWP  L  +G+T +E  I++  C
Sbjct: 66  NGETY-LGPNCCEAIKVIQHECWPTLLGSLGYTTEEGDILEAYC 107

[Close]

BLAST of IVF0000258 vs. TAIR 10
Match: AT2G21740.1 (Protein of unknown function (DUF1278) )

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08
Identity = 30/103 (29.13%), Postives = 52/103 (50.49%), Query Frame = 0


Query: 7   FCVLLFLLAMVFSSTVEASRGDAEVSPAARIKLDGAFDCLRSLPQLGKCIDDIRAIFRNR 66
           F  +  LL +  S        D+  + AAR+   G  +C  +L +L  C ++I   F N 
Sbjct: 9   FATIAILLVLNISGRTLPETEDS-TNIAARLNGGGLMECWNALYELKSCTNEIVLFFLN- 68

Query: 67  HKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCK 110
            + K+ ++CC A++ I  +CWP  L  +GFT+ E  ++   C+
Sbjct: 69  GETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQ 109

[Close]

BLAST of IVF0000258 vs. TAIR 10
Match: AT1G76750.1 (Protein of unknown function (DUF1278) )

HSP 1 Score: 55.1 bits (131), Expect = 4.3e-08
Identity = 39/111 (35.14%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 10  LLFLLAMVFSSTVEA------SRGDAE--VSPAARIKLD-GAFDCLRSLPQLGKCIDDIR 69
           ++ L+ MV SSTV A      S G +    S   R+KLD     C  SL QL  C  ++ 
Sbjct: 13  IVTLMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELI 72

Query: 70  AIFRNRHKWKISLNCCHAIKNIEHECWPEYLNLMGFTAKEIGIIDENCKIN 112
             F N   + I   CC AI+ I  +CWP  + ++GFTA+E  ++   C  N
Sbjct: 73  LFFLNGETY-IGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCDGN 122

The following BLAST results are available for this feature:

BLAST of IVF0000258 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ24	2.1e-07	29.13	Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana OX=3702 GN=EC1.2 PE=2 SV=1	[more]
Q9SRD8	6.0e-07	35.14	Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana OX=3702 GN=EC1.1 PE=2 SV=1	[more]

BLAST of IVF0000258 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DGY6	2.0e-50	100.00	Egg cell-secreted protein 1.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1KEX2	2.4e-11	43.12	egg cell-secreted protein 1.1-like OS=Cucurbita maxima OX=3661 GN=LOC111493240 P...	[more]
A0A6J1KD37	3.5e-10	41.28	egg cell-secreted protein 1.1-like OS=Cucurbita maxima OX=3661 GN=LOC111493241 P...	[more]
A0A0A0K9I7	4.6e-10	41.28	Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G0565...	[more]
A0A0A0LSR4	1.9e-08	36.70	Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G1240...	[more]

BLAST of IVF0000258 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK22823.1	2.52e-67	100.00	egg cell-secreted protein 1.2-like [Cucumis melo var. makuwa]	[more]
KAG6607143.1	4.39e-18	46.23	Egg cell-secreted protein 1.1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023524587.1	2.81e-16	44.34	egg cell-secreted protein 1.1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998659.1	2.24e-15	43.40	egg cell-secreted protein 1.1-like [Cucurbita maxima]	[more]
XP_023524588.1	1.26e-14	42.31	egg cell-secreted protein 1.1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0000258 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21740.1	1.5e-08	29.13	Protein of unknown function (DUF1278)	[more]
AT1G76750.1	4.3e-08	35.14	Protein of unknown function (DUF1278)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008502	Prolamin-like domain	PFAM	PF05617	Prolamin_like	coord: 44..108 e-value: 5.0E-11 score: 42.6
IPR044711	Egg cell-secreted protein 1.1/1.5	PANTHER	PTHR35293	EGG CELL-SECRETED PROTEIN 1.5	coord: 4..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000258.2	IVF0000258.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009567	double fertilization forming a zygote and endosperm
cellular_component	GO:0110165	cellular anatomical entity