IVF0000237 (gene) Melon (IVF77) v1

Overview
NameIVF0000237
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr07: 19442651 .. 19442854 (+)
RNA-Seq ExpressionIVF0000237
SyntenyIVF0000237
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTCGGGAATAACAGGCTTTTTCGACGCAAAGAGTAAGAGGTCGGAAGAAAAAGATATTCCTGACGCATTAGGCGTAGTGTCGGGAATGGCGTCGGAAAAGGCAAGTTATCCTGATGCGCATTGCACGCGTTGGAAAAAAATCGTCGAAAATAAGGCCACATTAATTATTGAAGGCATGTATTCCCGACACCATGCATAG

mRNA sequence

ATGACGTCGGGAATAACAGGCTTTTTCGACGCAAAGAGTAAGAGGTCGGAAGAAAAAGATATTCCTGACGCATTAGGCGTAGTGTCGGGAATGGCGTCGGAAAAGGCAAGTTATCCTGATGCGCATTGCACGCGTTGGAAAAAAATCGTCGAAAATAAGGCCACATTAATTATTGAAGGCATGTATTCCCGACACCATGCATAG

Coding sequence (CDS)

ATGACGTCGGGAATAACAGGCTTTTTCGACGCAAAGAGTAAGAGGTCGGAAGAAAAAGATATTCCTGACGCATTAGGCGTAGTGTCGGGAATGGCGTCGGAAAAGGCAAGTTATCCTGATGCGCATTGCACGCGTTGGAAAAAAATCGTCGAAAATAAGGCCACATTAATTATTGAAGGCATGTATTCCCGACACCATGCATAG

Protein sequence

MTSGITGFFDAKSKRSEEKDIPDALGVVSGMASEKASYPDAHCTRWKKIVENKATLIIEGMYSRHHA
Homology
[Close]
BLAST of IVF0000237 vs. ExPASy TrEMBL
Match: A0A5D3DKF3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00460 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.0e-05
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 0 

Query: 2   TSGITGFFDAKSKRSEEKDIPDALGVVSGMASEKASYPDAHCTRWKKIVENKATLIIEGM 61
           TSGITG  DA+ K S EK I D L    G+A +KASYPDAH  R + IV N  TLII  +
Sbjct: 59  TSGITGSPDAQDKTSGEKSIFDTL----GLALKKASYPDAHYKRQENIVGNTTTLIIAEV 118

Query: 62  YSRHHA 68
            ++  A
Sbjct: 119 VAQSSA 120

[Close]
BLAST of IVF0000237 vs. ExPASy TrEMBL
Match: A0A5A7V2Y5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002390 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.0e-05
Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 0 

Query: 2   TSGITGFFDAKSKRSEEKDIPDALGVVSGMASEKASYPDAHCTRWKKIVENKATLIIEGM 61
           TSGITG  DA+ K S EK I D L    G+A +KASYPDAH  R + IV N  TLII  M
Sbjct: 59  TSGITGSPDAQDKTSGEKSIFDTL----GLALKKASYPDAHYKRQENIVGNTTTLIIAVM 114

[Close]
BLAST of IVF0000237 vs. NCBI nr
Match: TYK23982.1 (uncharacterized protein E5676_scaffold250G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 2.49e-07
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 0 

Query: 2   TSGITGFFDAKSKRSEEKDIPDALGVVSGMASEKASYPDAHCTRWKKIVENKATLIIEGM 61
           TSGITG  DA+ K S EK I D LG+    A +KASYPDAH  R + IV N  TLII  +
Sbjct: 59  TSGITGSPDAQDKTSGEKSIFDTLGL----ALKKASYPDAHYKRQENIVGNTTTLIIAEV 118

Query: 62  YSRHHA 67
            ++  A
Sbjct: 119 VAQSSA 120

[Close]
BLAST of IVF0000237 vs. NCBI nr
Match: KAA0061948.1 (uncharacterized protein E6C27_scaffold89G002390 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 2.57e-07
Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 0 

Query: 2   TSGITGFFDAKSKRSEEKDIPDALGVVSGMASEKASYPDAHCTRWKKIVENKATLIIEGM 61
           TSGITG  DA+ K S EK I D LG+    A +KASYPDAH  R + IV N  TLII  M
Sbjct: 59  TSGITGSPDAQDKTSGEKSIFDTLGL----ALKKASYPDAHYKRQENIVGNTTTLIIAVM 114

The following BLAST results are available for this feature:
BLAST of IVF0000237 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0000237 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DKF36.0e-0551.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V2Y56.0e-0556.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of IVF0000237 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK23982.12.49e-0751.52uncharacterized protein E5676_scaffold250G00460 [Cucumis melo var. makuwa][more]
KAA0061948.12.57e-0756.67uncharacterized protein E6C27_scaffold89G002390 [Cucumis melo var. makuwa][more]
BLAST of IVF0000237 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0000237.1IVF0000237.1mRNA